Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0007976

Physical Location & Seq

Genomic Coordinates Reverse (-)

33743527 .. 33747995

Gene Structure 4469 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ19336

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2685 bp

ATGAGACGATCGGTGATCTTCCTTCTCCTGTTTGCTCCCTTGATCGGCTGTTTCGTCAAGTCTGGTTCAGCCGAGGAGACCTCCCTCGCCAACCCAGATTCCGCCGGCGGCGCTCTCCAGCTCTTCAGCTCTCTTCTGCCTCCTGCACTTAGGAATGATGCAGCGCTTTTGGTCACATTGGATGGCAAGGTAGTTTCTGTCAACCCCAAGACGATGGAGATTGAGTGGGCCTTGTCCTCTGGTTCCCGAATTCACTCTTCCTATCAGAACGTCTCTTATTTCAACAACCGCAGGAGTGATGATGATGATGATGATCACTCTTTCATTGATATTGGTGAAGACTGGGCCCTCTATCGTCACAGCAACACCAACCAGAAGAAGAAGAAACTGTCGTCGAGTATTAGAGAATATGTCGCAACTACTCCGCTAGTTTCCGAGGATGGAGGAGTCACATTGGGGTCAAAGATCACTAAAGTATTTGCTGTTAATGCTGTGACCGGACAAGTAATTCATAGTTTTAGGTTGGGTGATAATACTCCTTCAGCTACTTTAGGTATGGAATCCACCAGTGCCGAGGGGTTGGAAACATCTGGACTGGTGTTGTATCTCGAGAGAACAGATTACACACTGCAGCATTGTACAGTCAAGGGCGATCTTCTGTGGAAATTAGAAATTGCAGAGTTTGATGCTCACTTTCGATATCCTAAAATTGGAAATGGGCTTGGTCTAGAGGACAGGCTTATTGCTAACTCAACAGTGCCTTATCAGAAGGAGAAGCCTGTTGTCATTCGGGTTCCTTATCGTAATTCGGTGGAATCTCGTTCTGTAATTGACGGTCTAACTGATGGGTATTATGGAGGCAAACCTCTCCCCCTTGAAGGTCCTCATAACGATCTTCTGGCACTGCCTTTTGACAAAGGTGCTGTACCTCCTCACAACAATGAAGGCAGAGAAATGCTTGCTTTGCCCTCTCTTGAATTTGTGGACTCTAGGATCTTGGCTCTCCCTACTAGAGATGTTGGTAAACTGGACATCACAAGCTCAGTGGCTGAATCTATTACTAACTTCCCCATACAATCTCTTTTTGTATTTCTTCTCACCCTATTATCCATTCTGGGATATATCTTTCGTTTTCTGACTGGAAAACAGCGTAAACTGAAAGTGGTGGCTGAGGAAAGTAAAGCGCAAGCAGGAGCTCCCAAAAAGAAGAAAACTCGAAGATTGGGAAATAATAAGAAGAATTTCAGTTATGAGAAAGACGCAAGAAATTTGTCGTATGAATATAAGTTTGGTGAATCTAATGGACCTGCACTTGGGGAAAGAAATGAAACAAAATTGCTCTTGACCTCTTCTGATTTTATTGATCGTGACAACGAGGGACGTAGGATTGGCAAGTTACTTGTTTCCAGTAATGAAATTGCTAAGGGGAGTAACGGTACCATTGTACTTGAGGGTATCTATGATGGTCGTCCAGTAGCTGTTAAACGCCTTGTGCGAACTCATCATGATGTGGCTTCGAAAGAGATTCAGAATCTTATTGCGTCTGATCAGCATCCAAATATTGTCCGTTGGTATGGCGTGGAGCATGATCAAGATTTTGTCTATATATCCTTGGAGCGCTGTTCATGTAGCTTAAATGACTTGATTTATTATTACTCAGAGTCTTCTCAAGGCCAAATTATCAACAAGGATGAGGATCCTCACTTTTTGGCCGAGTATCGCATTCAATTGCAGGCAATCATGGGAAAGAACAAGAATGTTGAATTGTGGAAGACAAATGGATACCCTTCACCCCAAATGTTAAAATTAATGAGTGATCTTGTTTCTGGACTTGCCCATTTGCATGAACTTGGAATTATACATCGGGATCTAAAGCCTCAGAATGTTTTGATAATCAAAGGCAGATCGTTATGTGCCAAGCTTTCAGATATGGGTATCAGCAAACGCCTTCAAGGGGACAGATCTTCCATAACCCAGCATGCTACTGGCTATGGGAGTTCAGGTTGGCAAGCACCTGAACAACTTCTCCATCAGCGGCAAACACGTGCAGTAGATTTATTTAGTTTAGGTTGTCTCCTCTTTTTCTGTCTCACTGGGGGTAAACACCCTTATGGGGATAGTATCGAGCGTGATGTGAATATAGTGAATGATCGGAAAGACCTATTCTTGGTAGAGAATATACCAGAAGCAATGGATCTTTTTACTCGTCTCTTGGATCCCAACCCTGACATGAGGCCAACAGCTGTGGATGTGTTGCATCATCCCTTTTTCTGGAGTTCTGAGACGAGACTTTCGTTTCTGCGTGATGCTAGTGATCGGGTTGAATTGGAGGATAGGGAGACTGCATCCCAGCTCTTAAGTTCATTAGAAAGTACTGCAGCAGTTGCTCTAAATGGTAAGTGGGATGAAAAGATGGAACCTGCATTCCTCAATAACATTGGTCGCTATAGGCGTTACAAGTTTGACAGCATCCGTGACTTGCTGCGTGTAATAAGGAACAAGTTAAATCACTACAGAGAACTTCCCCAAGAGATCCAGGAATTATTGGGGACAGTTCCTGAGGGCTTCGACAGTTATTTTTCAAGTCGATTCCCTAAATTATTAATCGAGGTTTATAATGTGTTGTACAAGTACTGCAAAGAGGAGGAATTTTTTCGCAAGTATATACAAGGCAAATTGGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002376 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006983 GO:0006984 GO:0006986 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008380 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009816 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010033 GO:0010467 GO:0010506 GO:0010508 GO:0012505 GO:0014070 GO:0016020 GO:0016070 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031329 GO:0031331 GO:0031984 GO:0033554 GO:0034263 GO:0034641 GO:0034976 GO:0035966 GO:0042175 GO:0042221 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0046483 GO:0046677 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0071216 GO:0071704 GO:0090304 GO:0098542 GO:0098827 GO:1901360 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko04140 ko04141 ko04210 ko04932 ko05010 map04140 map04141 map04210 map04932 map05010

Pfam Domains

Protein Families

PQQ Pkinase Ribonuc_2-5A

Protein Analysis

894

Amino Acids

100.68

Weight (kDa)

6.65

Isoelectric Point (pI)

39.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	470 - 751	7e-27	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	471 - 757	4.5e-37	Protein kinase domain
Ribonuc_2-5A	PF06479	763 - 888	1.4e-46	Ribonuclease 2-5A

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007976)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G24360 AT5G24360 AT5G24360
fragaria_vesca	FvH4_5g25750 FvH4_5g25750
malus_domestica	MD06G1007000.v1.1
prunus_persica	Prupe.5G008100_v2.0.a1 Prupe.5G008100_v2.0.a1 Prupe.5G008100_v2.0.a1
pyrus_communis	pycom02g08890 pycom06g00610
rosa_chinensis	RchiOBHm_Chr7g0216101
rosa_laevigata	RLG00000002594
rosa_multiflora	Rmu_co8312507.1_g000001 Rmu_sc0009767.1_g000002
rosa_roxburghii	Rroxscaffold_3G00243650
rosa_rugosa	Rorug07G0158900 Rorug07G0158900
rosa_samantha	Rh7AG295900 Rh7AG296000 Rh7BG288300 Rh7CG316300 Rh7DG298800
rosa_wichuraiana	Rw7G025170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2616
Acc36I	ACCTGC	2 cut(s)	1315, 2428
Acc65I	GGTACC	1 cut(s)	1436
AccB1I	GGYRCC	1 cut(s)	1436
AciI	CCGC	5 cut(s)	102, 108, 289, 425, 2035
AclWI	GGATC	8 cut(s)	1001, 1691, 1704, 1875, 2202, 2210, 2223, 2527
AcoI	YGGCCR	1 cut(s)	1710
AcsI	RAATTY	5 cut(s)	249, 977, 1240, 1267, 2648
AcuI	CTGAAG	2 cut(s)	109, 525
AcvI	CACGTG	1 cut(s)	2045
AfaI	GTAC	7 cut(s)	640, 927, 1438, 1446, 2374, 2627, 2633
AfeI	AGCGCT	2 cut(s)	165, 1619
AfiI	CCNNNNNNNGG	8 cut(s)	44, 710, 878, 1313, 1954, 2113, 2167, 2271
AflII	CTTAAG	1 cut(s)	2356
AflIII	ACRYGT	1 cut(s)	2042
AgsI	TTSAA	8 cut(s)	283, 878, 977, 1727, 1763, 1952, 2324, 2583
AjnI	CCWGG	1 cut(s)	2535
AjuI	GAANNNNNNNTTGG	2 cut(s)	1272, 1304
AloI	GAACNNNNNNTCC	4 cut(s)	2010, 2042, 2409, 2441
Alw21I	GWGCWC	1 cut(s)	1198
Alw26I	GTCTC	8 cut(s)	71, 277, 2078, 2093, 2213, 2276, 2281, 2333
AlwI	GGATC	8 cut(s)	1001, 1691, 1704, 1875, 2202, 2210, 2223, 2527
AlwNI	CAGNNNCTG	3 cut(s)	1049, 1478, 2558
Ama87I	CYCGRG	1 cut(s)	608
Aor51HI	AGCGCT	2 cut(s)	165, 1619
AoxI	GGCC	5 cut(s)	228, 345, 1672, 1710, 2234
ApaI	GGGCCC	1 cut(s)	349
ApeKI	GCWGC	4 cut(s)	161, 631, 2378, 2482
ApoI	RAATTY	5 cut(s)	249, 977, 1240, 1267, 2648
ArsI	GACNNNNNNTTYG	2 cut(s)	2275, 2307
AseI	ATTAAT	2 cut(s)	1808, 2603
Asp700I	GAANNNNTTC	3 cut(s)	1241, 2022, 2652
Asp718I	GGTACC	1 cut(s)	1436
AspLEI	GCGC	4 cut(s)	113, 166, 1186, 1620
AspS9I	GGNCC	5 cut(s)	228, 345, 346, 881, 1304
AsuHPI	GGTGA	6 cut(s)	25, 347, 539, 1090, 1304, 1782
AsuII	TTCGAA	1 cut(s)	1517
AvaI	CYCGRG	1 cut(s)	608
AvaII	GGWCC	2 cut(s)	881, 1304
AxyI	CCTNAGG	1 cut(s)	2559
BaeGI	GKGCMC	1 cut(s)	349
BaeI	ACNNNNGTAYC	2 cut(s)	1428, 1461
BamHI	GGATCC	2 cut(s)	1696, 2215
BanI	GGYRCC	1 cut(s)	1436
BanII	GRGCYC	2 cut(s)	349, 1198
BbrPI	CACGTG	1 cut(s)	2045
BbsI	GAAGAC	3 cut(s)	345, 1656, 1778
Bbv12I	GWGCWC	1 cut(s)	1198
BbvCI	CCTCAGC	1 cut(s)	1170
BbvI	GCAGC	4 cut(s)	173, 643, 2390, 2469
BccI	CCATC	7 cut(s)	176, 208, 434, 839, 1457, 2037, 2407
BciT130I	CCWGG	1 cut(s)	2537
BciVI	GTATCC	1 cut(s)	1775
BclI	TGATCA	3 cut(s)	313, 1546, 1588
BcoDI	GTCTC	8 cut(s)	71, 277, 2078, 2093, 2213, 2276, 2281, 2333
BfaI	CTAG	5 cut(s)	428, 728, 990, 1011, 2310
BfmI	CTRYAG	4 cut(s)	629, 2376, 2446, 2512
BfoI	RGCGCY	3 cut(s)	114, 167, 1621
BfrI	CTTAAG	1 cut(s)	2356
BfuAI	ACCTGC	2 cut(s)	1315, 2428
BfuI	GTATCC	1 cut(s)	1775
BglII	AGATCT	1 cut(s)	1961
BisI	GCNGC	6 cut(s)	109, 162, 632, 2036, 2379, 2483
BlsI	GCNGC	6 cut(s)	110, 163, 633, 2037, 2380, 2484
BmcAI	AGTACT	2 cut(s)	2374, 2633
Bme1390I	CCNGG	1 cut(s)	2537
Bme18I	GGWCC	2 cut(s)	881, 1304
BmeT110I	CYCGRG	1 cut(s)	608
BmgT120I	GGNCC	5 cut(s)	228, 345, 346, 881, 1304
BmiI	GGNNCC	7 cut(s)	244, 347, 795, 1438, 1698, 2217, 2418
BmrFI	CCNGG	1 cut(s)	2537
BmrI	ACTGGG	2 cut(s)	352, 2103
BmsI	GCATC	7 cut(s)	148, 676, 1561, 2266, 2296, 2354, 2478
BmuI	ACTGGG	2 cut(s)	352, 2103
BpiI	GAAGAC	3 cut(s)	345, 1656, 1778
BplI	GAGNNNNNCTC	2 cut(s)	65, 97
BpmI	CTGGAG	2 cut(s)	101, 2293
Bpu10I	CCTNAGC	2 cut(s)	1170, 1422
Bpu14I	TTCGAA	1 cut(s)	1517
BpuEI	CTTGAG	2 cut(s)	1469, 1653
BsaAI	YACGTR	1 cut(s)	2045
BsaBI	GATNNNNATC	3 cut(s)	312, 1551, 1695
BsaI	GGTCTC	1 cut(s)	71
BsaJI	CCNNGG	4 cut(s)	72, 435, 573, 1611
BsaWI	WCCGGW	1 cut(s)	497
BsaXI	ACNNNNNCTCC	8 cut(s)	209, 239, 1420, 1450, 1987, 2010, 2017, 2040
Bsc4I	CCNNNNNNNGG	8 cut(s)	44, 710, 878, 1313, 1954, 2113, 2167, 2271
Bse118I	RCCGGY	1 cut(s)	104
Bse1I	ACTGG	9 cut(s)	347, 567, 600, 1032, 1144, 1407, 1472, 1990, 2098
Bse21I	CCTNAGG	1 cut(s)	2559
Bse3DI	GCAATG	1 cut(s)	2196
Bse8I	GATNNNNATC	3 cut(s)	312, 1551, 1695
BseBI	CCWGG	1 cut(s)	2537
BseDI	CCNNGG	4 cut(s)	72, 435, 573, 1611
BseGI	GGATG	9 cut(s)	187, 445, 1552, 1696, 2254, 2260, 2345, 2410, 2469
BseJI	GATNNNNATC	3 cut(s)	312, 1551, 1695
BseLI	CCNNNNNNNGG	8 cut(s)	44, 710, 878, 1313, 1954, 2113, 2167, 2271
BseMI	GCAATG	1 cut(s)	2196
BseMII	CTCAG	6 cut(s)	1056, 1161, 1671, 1892, 2271, 2550
BseNI	ACTGG	9 cut(s)	347, 567, 600, 1032, 1144, 1407, 1472, 1990, 2098
BseRI	GAGGAG	5 cut(s)	89, 459, 921, 2066, 2657
BseSI	GKGCMC	1 cut(s)	349
BseXI	GCAGC	4 cut(s)	173, 643, 2390, 2469
BseYI	CCCAGC	2 cut(s)	1974, 2349
BsgI	GTGCAG	3 cut(s)	129, 1293, 2067
Bsh1285I	CGRYCG	1 cut(s)	11
BshFI	GGCC	5 cut(s)	230, 347, 1674, 1712, 2236
BshNI	GGYRCC	1 cut(s)	1436
BsiEI	CGRYCG	1 cut(s)	11
BsiHKAI	GWGCWC	1 cut(s)	1198
BsiHKCI	CYCGRG	1 cut(s)	608
BsiSI	CCGG	2 cut(s)	105, 498
BslFI	GGGAC	3 cut(s)	1392, 1970, 2563
BslI	CCNNNNNNNGG	8 cut(s)	44, 710, 878, 1313, 1954, 2113, 2167, 2271
BsmAI	GTCTC	8 cut(s)	71, 277, 2078, 2093, 2213, 2276, 2281, 2333
BsmBI	CGTCTC	3 cut(s)	277, 2213, 2276
BsmFI	GGGAC	3 cut(s)	1392, 1970, 2563
BsmI	GAATGC	2 cut(s)	1722, 2423
BsnI	GGCC	5 cut(s)	230, 347, 1674, 1712, 2236
Bso31I	GGTCTC	1 cut(s)	71
BsoBI	CYCGRG	1 cut(s)	608
Bsp119I	TTCGAA	1 cut(s)	1517
Bsp120I	GGGCCC	1 cut(s)	345
Bsp1286I	GDGCHC	2 cut(s)	349, 1198
Bsp1407I	TGTACA	2 cut(s)	638, 2625
BspACI	CCGC	5 cut(s)	102, 108, 289, 425, 2035
BspANI	GGCC	5 cut(s)	230, 347, 1674, 1712, 2236
BspCNI	CTCAG	6 cut(s)	1055, 1162, 1670, 1891, 2272, 2551
BspHI	TCATGA	1 cut(s)	1504
BspLI	GGNNCC	7 cut(s)	244, 347, 795, 1438, 1698, 2217, 2418
BspMAI	CTGCAG	2 cut(s)	633, 2380
BspMI	ACCTGC	2 cut(s)	1315, 2428
BspPI	GGATC	8 cut(s)	1001, 1691, 1704, 1875, 2202, 2210, 2223, 2527
BspQI	GCTCTTC	1 cut(s)	128
BspT104I	TTCGAA	1 cut(s)	1517
BspT107I	GGYRCC	1 cut(s)	1436
BspTI	CTTAAG	1 cut(s)	2356
BspTNI	GGTCTC	1 cut(s)	71
BsrDI	GCAATG	1 cut(s)	2196
BsrFI	RCCGGY	1 cut(s)	104
BsrGI	TGTACA	2 cut(s)	638, 2625
BsrI	ACTGG	9 cut(s)	347, 567, 600, 1032, 1144, 1407, 1472, 1990, 2098
BssAI	RCCGGY	1 cut(s)	104
BssECI	CCNNGG	4 cut(s)	72, 435, 573, 1611
BssT1I	CCWWGG	1 cut(s)	1611
Bst2UI	CCWGG	1 cut(s)	2537
Bst4CI	ACNGT	7 cut(s)	390, 643, 757, 836, 1436, 2554, 2573
Bst6I	CTCTTC	4 cut(s)	128, 138, 262, 1354
BstAFI	CTTAAG	1 cut(s)	2356
BstAPI	GCANNNNNTGC	1 cut(s)	2384
BstAUI	TGTACA	2 cut(s)	638, 2625
BstBAI	YACGTR	1 cut(s)	2045
BstBI	TTCGAA	1 cut(s)	1517
BstC8I	GCNNGC	6 cut(s)	106, 960, 1188, 1734, 1980, 2010
BstDEI	CTNAG	8 cut(s)	149, 1042, 1170, 1422, 1657, 1878, 2280, 2559
BstF5I	GGATG	9 cut(s)	187, 445, 1552, 1696, 2254, 2260, 2345, 2410, 2469
BstH2I	RGCGCY	3 cut(s)	114, 167, 1621
BstHHI	GCGC	4 cut(s)	113, 166, 1186, 1620
BstMAI	GTCTC	8 cut(s)	71, 277, 2078, 2093, 2213, 2276, 2281, 2333
BstMCI	CGRYCG	1 cut(s)	11
BstMWI	GCNNNNNNNGC	4 cut(s)	110, 488, 964, 2384
BstNI	CCWGG	1 cut(s)	2537
BstNSI	RCATGY	1 cut(s)	1982
BstSCI	CCNGG	1 cut(s)	2535
BstSFI	CTRYAG	4 cut(s)	629, 2376, 2446, 2512
BstSLI	GKGCMC	1 cut(s)	349
BstV1I	GCAGC	4 cut(s)	173, 643, 2390, 2469
BstV2I	GAAGAC	3 cut(s)	345, 1656, 1778
BstX2I	RGATCY	7 cut(s)	993, 1696, 1867, 1961, 2194, 2215, 2532
BstXI	CCANNNNNNTGG	1 cut(s)	214
BstYI	RGATCY	7 cut(s)	993, 1696, 1867, 1961, 2194, 2215, 2532
Bsu36I	CCTNAGG	1 cut(s)	2559
BsuI	GTATCC	1 cut(s)	1775
BsuRI	GGCC	5 cut(s)	230, 347, 1674, 1712, 2236
BtsCI	GGATG	9 cut(s)	187, 445, 1552, 1696, 2254, 2260, 2345, 2410, 2469
BtsI	GCAGTG	2 cut(s)	626, 902
BtsIMutI	CAGTG	6 cut(s)	574, 626, 762, 902, 1050, 2091
BveI	ACCTGC	2 cut(s)	1315, 2428
Cac8I	GCNNGC	6 cut(s)	106, 960, 1188, 1734, 1980, 2010
CaiI	CAGNNNCTG	3 cut(s)	1049, 1478, 2558
CciI	TCATGA	1 cut(s)	1504
CfoI	GCGC	4 cut(s)	113, 166, 1186, 1620
Cfr10I	RCCGGY	1 cut(s)	104
Cfr13I	GGNCC	5 cut(s)	228, 345, 346, 881, 1304
CseI	GACGC	2 cut(s)	1268, 1530
Csp6I	GTAC	7 cut(s)	639, 926, 1437, 1445, 2373, 2626, 2632
CspCI	CAANNNNNGTGG	4 cut(s)	1026, 1061, 2226, 2261
CviAII	CATG	7 cut(s)	1505, 1586, 1626, 1741, 1844, 1979, 2230
CviQI	GTAC	7 cut(s)	639, 926, 1437, 1445, 2373, 2626, 2632
DdeI	CTNAG	8 cut(s)	149, 1042, 1170, 1422, 1657, 1878, 2280, 2559
EaeI	YGGCCR	1 cut(s)	1710
Eam1104I	CTCTTC	4 cut(s)	128, 138, 262, 1354
EarI	CTCTTC	4 cut(s)	128, 138, 262, 1354
EciI	GGCGGA	1 cut(s)	91
Ecl136II	GAGCTC	1 cut(s)	1196
Eco130I	CCWWGG	1 cut(s)	1611
Eco24I	GRGCYC	2 cut(s)	349, 1198
Eco31I	GGTCTC	1 cut(s)	71
Eco32I	GATATC	1 cut(s)	701
Eco47I	GGWCC	2 cut(s)	881, 1304
Eco47III	AGCGCT	2 cut(s)	165, 1619
Eco53kI	GAGCTC	1 cut(s)	1196
Eco57I	CTGAAG	2 cut(s)	109, 525
Eco72I	CACGTG	1 cut(s)	2045
Eco81I	CCTNAGG	1 cut(s)	2559
Eco88I	CYCGRG	1 cut(s)	608
EcoICRI	GAGCTC	1 cut(s)	1196
EcoO109I	RGGNCCY	2 cut(s)	346, 881
EcoRI	GAATTC	1 cut(s)	249
EcoRII	CCWGG	1 cut(s)	2535
EcoRV	GATATC	1 cut(s)	701
EcoT14I	CCWWGG	1 cut(s)	1611
EcoT38I	GRGCYC	2 cut(s)	349, 1198
ErhI	CCWWGG	1 cut(s)	1611
Esp3I	CGTCTC	3 cut(s)	277, 2213, 2276
FaeI	CATG	7 cut(s)	1508, 1589, 1629, 1744, 1847, 1982, 2233
FaqI	GGGAC	3 cut(s)	1392, 1970, 2563
FatI	CATG	7 cut(s)	1504, 1585, 1625, 1740, 1843, 1978, 2229
FbaI	TGATCA	3 cut(s)	313, 1546, 1588
Fnu4HI	GCNGC	6 cut(s)	109, 162, 632, 2036, 2379, 2483
FokI	GGATG	9 cut(s)	194, 452, 1539, 1703, 2247, 2261, 2332, 2417, 2456
FriOI	GRGCYC	2 cut(s)	349, 1198
Fsp4HI	GCNGC	6 cut(s)	109, 162, 632, 2036, 2379, 2483
FspBI	CTAG	5 cut(s)	428, 728, 990, 1011, 2310
GlaI	GCGC	4 cut(s)	112, 165, 1185, 1619
GluI	GCNGC	6 cut(s)	109, 162, 632, 2036, 2379, 2483
GsaI	CCCAGC	2 cut(s)	1978, 2353
GsuI	CTGGAG	2 cut(s)	101, 2293
HaeII	RGCGCY	3 cut(s)	114, 167, 1621
HaeIII	GGCC	5 cut(s)	230, 347, 1674, 1712, 2236
HapII	CCGG	2 cut(s)	105, 498
HgaI	GACGC	2 cut(s)	1268, 1530
HhaI	GCGC	4 cut(s)	113, 166, 1186, 1620
Hin1II	CATG	7 cut(s)	1508, 1589, 1629, 1744, 1847, 1982, 2233
Hin6I	GCGC	4 cut(s)	111, 164, 1184, 1618
HinP1I	GCGC	4 cut(s)	111, 164, 1184, 1618
HincII	GTYRAC	1 cut(s)	202
HindII	GTYRAC	1 cut(s)	202
HindIII	AAGCTT	1 cut(s)	1919
HpaII	CCGG	2 cut(s)	105, 498
HphI	GGTGA	6 cut(s)	25, 347, 539, 1090, 1304, 1782
Hpy166II	GTNNAC	5 cut(s)	202, 985, 1025, 1154, 2102
Hpy8I	GTNNAC	5 cut(s)	202, 985, 1025, 1154, 2102
Hpy99I	CGWCG	1 cut(s)	397
HpyAV	CCTTC	7 cut(s)	32, 549, 763, 872, 938, 1797, 1958
HpyCH4III	ACNGT	7 cut(s)	390, 643, 757, 836, 1436, 2554, 2573
HpyCH4IV	ACGT	3 cut(s)	270, 1381, 2044
HpyF10VI	GCNNNNNNNGC	4 cut(s)	110, 488, 964, 2384
HpyF3I	CTNAG	8 cut(s)	149, 1042, 1170, 1422, 1657, 1878, 2280, 2559
HpySE526I	ACGT	3 cut(s)	270, 1381, 2044
Hsp92II	CATG	7 cut(s)	1508, 1589, 1629, 1744, 1847, 1982, 2233
HspAI	GCGC	4 cut(s)	111, 164, 1184, 1618
KpnI	GGTACC	1 cut(s)	1440
KroI	GCCGGC	1 cut(s)	104
KroNI	GCCGGC	1 cut(s)	106
Ksp22I	TGATCA	3 cut(s)	313, 1546, 1588
LguI	GCTCTTC	1 cut(s)	128
LmnI	GCTCC	5 cut(s)	40, 1193, 1201, 1582, 1615
Lsp1109I	GCAGC	4 cut(s)	173, 643, 2390, 2469
LweI	GCATC	7 cut(s)	148, 676, 1561, 2266, 2296, 2354, 2478
MaeI	CTAG	5 cut(s)	428, 728, 990, 1011, 2310
MaeII	ACGT	3 cut(s)	270, 1381, 2044
MaeIII	GTNAC	9 cut(s)	172, 356, 448, 493, 1367, 1395, 1430, 2453, 2474
MfeI	CAATTG	1 cut(s)	1727
MflI	RGATCY	7 cut(s)	993, 1696, 1867, 1961, 2194, 2215, 2532
MhlI	GDGCHC	2 cut(s)	349, 1198
MlyI	GAGTC	3 cut(s)	456, 980, 1670
MmeI	TCCRAC	1 cut(s)	561
MreI	CGCCGGCG	1 cut(s)	104
MroNI	GCCGGC	1 cut(s)	104
MroXI	GAANNNNTTC	3 cut(s)	1241, 2022, 2652
MseI	TTAA	8 cut(s)	486, 1482, 1634, 1802, 1808, 2357, 2504, 2603
MslI	CAYNNNNRTG	4 cut(s)	939, 1506, 1842, 2109
MspA1I	CMGCKG	2 cut(s)	2035, 2243
MspCI	CTTAAG	1 cut(s)	2356
MspI	CCGG	2 cut(s)	105, 498
MspR9I	CCNGG	1 cut(s)	2537
MunI	CAATTG	1 cut(s)	1727
Mva1269I	GAATGC	2 cut(s)	1722, 2423
MvaI	CCWGG	1 cut(s)	2537
MwoI	GCNNNNNNNGC	4 cut(s)	110, 488, 964, 2384
NaeI	GCCGGC	1 cut(s)	106
NgoMIV	GCCGGC	1 cut(s)	104
NlaIII	CATG	7 cut(s)	1508, 1589, 1629, 1744, 1847, 1982, 2233
NlaIV	GGNNCC	7 cut(s)	244, 347, 795, 1438, 1698, 2217, 2418
NmeAIII	GCCGAG	3 cut(s)	97, 598, 1738
NmuCI	GTSAC	6 cut(s)	172, 356, 448, 493, 1367, 2474
NspI	RCATGY	1 cut(s)	1982
NspV	TTCGAA	1 cut(s)	1517
PaeI	GCATGC	1 cut(s)	1982
PaeR7I	CTCGAG	1 cut(s)	608
PagI	TCATGA	1 cut(s)	1504
PciSI	GCTCTTC	1 cut(s)	128
PcsI	WCGNNNNNNNCGW	4 cut(s)	51, 1492, 2291, 2449
PctI	GAATGC	2 cut(s)	1722, 2423
PdiI	GCCGGC	1 cut(s)	106
PdmI	GAANNNNTTC	3 cut(s)	1241, 2022, 2652
PfeI	GAWTC	8 cut(s)	98, 560, 815, 1052, 1295, 1525, 1531, 2589
PfoI	TCCNGGA	1 cut(s)	2535
PkrI	GCNGC	6 cut(s)	110, 163, 633, 2037, 2380, 2484
Ple19I	CGATCG	1 cut(s)	11
PleI	GAGTC	3 cut(s)	455, 980, 1669
PmaCI	CACGTG	1 cut(s)	2045
PmlI	CACGTG	1 cut(s)	2045
PpsI	GAGTC	3 cut(s)	455, 980, 1669
Ppu21I	YACGTR	1 cut(s)	2045
PpuMI	RGGWCCY	1 cut(s)	881
PshBI	ATTAAT	2 cut(s)	1808, 2603
PsiI	TTATAA	1 cut(s)	2616
Psp124BI	GAGCTC	1 cut(s)	1198
Psp5II	RGGWCCY	1 cut(s)	881
Psp6I	CCWGG	1 cut(s)	2535
PspCI	CACGTG	1 cut(s)	2045
PspFI	CCCAGC	2 cut(s)	1974, 2349
PspGI	CCWGG	1 cut(s)	2535
PspN4I	GGNNCC	7 cut(s)	244, 347, 795, 1438, 1698, 2217, 2418
PspOMI	GGGCCC	1 cut(s)	345
PspPI	GGNCC	5 cut(s)	228, 345, 346, 881, 1304
PspPPI	RGGWCCY	1 cut(s)	881
PstI	CTGCAG	2 cut(s)	633, 2380
PstNI	CAGNNNCTG	3 cut(s)	1049, 1478, 2558
PsuI	RGATCY	7 cut(s)	993, 1696, 1867, 1961, 2194, 2215, 2532
PvuI	CGATCG	1 cut(s)	11
PvuII	CAGCTG	1 cut(s)	2243
RsaI	GTAC	7 cut(s)	640, 927, 1438, 1446, 2374, 2627, 2633
RsaNI	GTAC	7 cut(s)	639, 926, 1437, 1445, 2373, 2626, 2632
RseI	CAYNNNNRTG	4 cut(s)	939, 1506, 1842, 2109
SacI	GAGCTC	1 cut(s)	1198
SapI	GCTCTTC	1 cut(s)	128
SaqAI	TTAA	8 cut(s)	486, 1482, 1634, 1802, 1808, 2357, 2504, 2603
SatI	GCNGC	6 cut(s)	109, 162, 632, 2036, 2379, 2483
Sau96I	GGNCC	5 cut(s)	228, 345, 346, 881, 1304
ScaI	AGTACT	2 cut(s)	2374, 2633
SchI	GAGTC	3 cut(s)	456, 980, 1670
ScrFI	CCNGG	1 cut(s)	2537
SduI	GDGCHC	2 cut(s)	349, 1198
SfaNI	GCATC	7 cut(s)	148, 676, 1561, 2266, 2296, 2354, 2478
SfcI	CTRYAG	4 cut(s)	629, 2376, 2446, 2512
Sfr274I	CTCGAG	1 cut(s)	608
SfuI	TTCGAA	1 cut(s)	1517
SgrAI	CRCCGGYG	1 cut(s)	104
SinI	GGWCC	2 cut(s)	881, 1304
SlaI	CTCGAG	1 cut(s)	608
SmiMI	CAYNNNNRTG	4 cut(s)	939, 1506, 1842, 2109
SmlI	CTYRAG	4 cut(s)	608, 1448, 1668, 2356
SmoI	CTYRAG	4 cut(s)	608, 1448, 1668, 2356
SphI	GCATGC	1 cut(s)	1982
SsiI	CCGC	5 cut(s)	102, 108, 289, 425, 2035
SspI	AATATT	1 cut(s)	1561
SspMI	CTAG	5 cut(s)	428, 728, 990, 1011, 2310
SstI	GAGCTC	1 cut(s)	1198
StyD4I	CCNGG	1 cut(s)	2535
StyI	CCWWGG	1 cut(s)	1611
TaaI	ACNGT	7 cut(s)	390, 643, 757, 836, 1436, 2554, 2573
TaiI	ACGT	3 cut(s)	273, 1384, 2047
TaqI	TCGA	9 cut(s)	395, 609, 697, 1216, 1517, 2124, 2568, 2587, 2607
TatI	WGTACW	5 cut(s)	638, 1444, 2372, 2625, 2631
TauI	GCSGC	2 cut(s)	111, 2038
TfiI	GAWTC	8 cut(s)	98, 560, 815, 1052, 1295, 1525, 1531, 2589
Tru1I	TTAA	8 cut(s)	486, 1482, 1634, 1802, 1808, 2357, 2504, 2603
Tru9I	TTAA	8 cut(s)	486, 1482, 1634, 1802, 1808, 2357, 2504, 2603
TscAI	CASTG	6 cut(s)	574, 633, 762, 909, 1050, 2098
TseFI	GTSAC	6 cut(s)	172, 356, 448, 493, 1367, 2474
TseI	GCWGC	4 cut(s)	161, 631, 2378, 2482
Tsp45I	GTSAC	6 cut(s)	172, 356, 448, 493, 1367, 2474
TspGWI	ACGGA	2 cut(s)	1556, 2462
TspRI	CASTG	6 cut(s)	574, 633, 762, 909, 1050, 2098
Vha464I	CTTAAG	1 cut(s)	2356
VpaK11BI	GGWCC	2 cut(s)	881, 1304
VspI	ATTAAT	2 cut(s)	1808, 2603
XapI	RAATTY	5 cut(s)	249, 977, 1240, 1267, 2648
XbaI	TCTAGA	1 cut(s)	727
XceI	RCATGY	1 cut(s)	1982
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1982
XhoI	CTCGAG	1 cut(s)	608
XmnI	GAANNNNTTC	3 cut(s)	1241, 2022, 2652
XspI	CTAG	5 cut(s)	428, 728, 990, 1011, 2310
ZrmI	AGTACT	2 cut(s)	2374, 2633

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.