The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G05010 AT5G05010 |
| fragaria_vesca | FvH4_5g25700 FvH4_5g25700 FvH4_5g25700 FvH4_5g27071 FvH4_5g27071 |
| malus_domestica | MD09G1288200.v1.1 MD17G1280500.v1.1 |
| prunus_persica | Prupe.3G005000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr7g0216031 |
| rosa_laevigata | RLG00000002598 |
| rosa_multiflora | Rmu_sc0002356.1_g000010 Rmu_sc0007828.1_g000007 |
| rosa_roxburghii | Rroxscaffold_3G00243720 |
| rosa_rugosa | Rorug07G0158300 Rorug07G0158300 |
| rosa_samantha | Rh7AG295500 Rh7BG287600 Rh7CG315900 Rh7DG298400 |
| rosa_wichuraiana | Rw7G025130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 277 |
| AfaI | GTAC | 2 cut(s) | 204, 270 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 36 |
| AflIII | ACRYGT | 1 cut(s) | 246 |
| AgsI | TTSAA | 1 cut(s) | 275 |
| AluBI | AGCT | 5 cut(s) | 317, 325, 427, 436, 488 |
| AluI | AGCT | 5 cut(s) | 317, 325, 427, 436, 488 |
| Alw26I | GTCTC | 2 cut(s) | 146, 472 |
| AoxI | GGCC | 1 cut(s) | 33 |
| ApeKI | GCWGC | 2 cut(s) | 14, 427 |
| ApoI | RAATTY | 1 cut(s) | 277 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 162 |
| AsuC2I | CCSGG | 1 cut(s) | 37 |
| BaeGI | GKGCMC | 1 cut(s) | 363 |
| BbsI | GAAGAC | 2 cut(s) | 86, 243 |
| BbvI | GCAGC | 1 cut(s) | 414 |
| BccI | CCATC | 1 cut(s) | 400 |
| BcnI | CCSGG | 1 cut(s) | 37 |
| BcoDI | GTCTC | 2 cut(s) | 146, 472 |
| BfaI | CTAG | 2 cut(s) | 119, 290 |
| BfmI | CTRYAG | 1 cut(s) | 183 |
| BisI | GCNGC | 2 cut(s) | 15, 428 |
| BlsI | GCNGC | 2 cut(s) | 16, 429 |
| Bme1390I | CCNGG | 1 cut(s) | 37 |
| BmrFI | CCNGG | 1 cut(s) | 37 |
| BmsI | GCATC | 1 cut(s) | 460 |
| BpiI | GAAGAC | 2 cut(s) | 86, 243 |
| BpuEI | CTTGAG | 1 cut(s) | 369 |
| BpuMI | CCSGG | 1 cut(s) | 37 |
| BsaJI | CCNNGG | 1 cut(s) | 30 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 36 |
| BseDI | CCNNGG | 1 cut(s) | 30 |
| BseGI | GGATG | 2 cut(s) | 411, 475 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 36 |
| BseSI | GKGCMC | 1 cut(s) | 363 |
| BseXI | GCAGC | 1 cut(s) | 414 |
| BshFI | GGCC | 1 cut(s) | 35 |
| BsiSI | CCGG | 1 cut(s) | 36 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 36 |
| BsmAI | GTCTC | 2 cut(s) | 146, 472 |
| BsmBI | CGTCTC | 1 cut(s) | 472 |
| BsnI | GGCC | 1 cut(s) | 35 |
| Bsp1286I | GDGCHC | 1 cut(s) | 363 |
| BspANI | GGCC | 1 cut(s) | 35 |
| BspHI | TCATGA | 1 cut(s) | 415 |
| BssECI | CCNNGG | 1 cut(s) | 30 |
| BssT1I | CCWWGG | 1 cut(s) | 30 |
| Bst4CI | ACNGT | 1 cut(s) | 60 |
| Bst6I | CTCTTC | 1 cut(s) | 414 |
| BstDEI | CTNAG | 1 cut(s) | 264 |
| BstF5I | GGATG | 2 cut(s) | 411, 475 |
| BstMAI | GTCTC | 2 cut(s) | 146, 472 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 433, 442 |
| BstSCI | CCNGG | 1 cut(s) | 35 |
| BstSFI | CTRYAG | 1 cut(s) | 183 |
| BstSLI | GKGCMC | 1 cut(s) | 363 |
| BstV1I | GCAGC | 1 cut(s) | 414 |
| BstV2I | GAAGAC | 2 cut(s) | 86, 243 |
| BsuRI | GGCC | 1 cut(s) | 35 |
| BtsCI | GGATG | 2 cut(s) | 411, 475 |
| CciI | TCATGA | 1 cut(s) | 415 |
| Csp6I | GTAC | 2 cut(s) | 203, 269 |
| CviAII | CATG | 2 cut(s) | 282, 416 |
| CviQI | GTAC | 2 cut(s) | 203, 269 |
| DdeI | CTNAG | 1 cut(s) | 264 |
| Eam1104I | CTCTTC | 1 cut(s) | 414 |
| EarI | CTCTTC | 1 cut(s) | 414 |
| Eco130I | CCWWGG | 1 cut(s) | 30 |
| EcoT14I | CCWWGG | 1 cut(s) | 30 |
| ErhI | CCWWGG | 1 cut(s) | 30 |
| Esp3I | CGTCTC | 1 cut(s) | 472 |
| FaeI | CATG | 2 cut(s) | 285, 419 |
| FaiI | YATR | 8 cut(s) | 71, 141, 145, 196, 283, 417, 443, 476 |
| FatI | CATG | 2 cut(s) | 281, 415 |
| Fnu4HI | GCNGC | 2 cut(s) | 15, 428 |
| FokI | GGATG | 2 cut(s) | 418, 482 |
| Fsp4HI | GCNGC | 2 cut(s) | 15, 428 |
| FspBI | CTAG | 2 cut(s) | 119, 290 |
| GluI | GCNGC | 2 cut(s) | 15, 428 |
| HaeIII | GGCC | 1 cut(s) | 35 |
| HapII | CCGG | 1 cut(s) | 36 |
| Hin1II | CATG | 2 cut(s) | 285, 419 |
| HindIII | AAGCTT | 2 cut(s) | 315, 434 |
| HinfI | GANTC | 3 cut(s) | 303, 376, 412 |
| HpaII | CCGG | 1 cut(s) | 36 |
| Hpy166II | GTNNAC | 1 cut(s) | 175 |
| Hpy188I | TCNGA | 1 cut(s) | 67 |
| Hpy188III | TCNNGA | 2 cut(s) | 54, 416 |
| Hpy8I | GTNNAC | 1 cut(s) | 175 |
| HpyAV | CCTTC | 1 cut(s) | 293 |
| HpyCH4III | ACNGT | 1 cut(s) | 60 |
| HpyCH4IV | ACGT | 2 cut(s) | 248, 481 |
| HpyCH4V | TGCA | 3 cut(s) | 309, 430, 445 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 433, 442 |
| HpyF3I | CTNAG | 1 cut(s) | 264 |
| HpySE526I | ACGT | 2 cut(s) | 248, 481 |
| Hsp92II | CATG | 2 cut(s) | 285, 419 |
| LpnPI | CCDG | 3 cut(s) | 49, 191, 195 |
| Lsp1109I | GCAGC | 1 cut(s) | 414 |
| LweI | GCATC | 1 cut(s) | 460 |
| MaeI | CTAG | 2 cut(s) | 119, 290 |
| MaeII | ACGT | 2 cut(s) | 248, 481 |
| MaeIII | GTNAC | 5 cut(s) | 25, 114, 208, 373, 530 |
| MboII | GAAGA | 6 cut(s) | 86, 248, 308, 431, 460, 463 |
| MhlI | GDGCHC | 1 cut(s) | 363 |
| MluCI | AATT | 3 cut(s) | 84, 277, 395 |
| MlyI | GAGTC | 2 cut(s) | 370, 421 |
| MnlI | CCTC | 2 cut(s) | 82, 84 |
| MroXI | GAANNNNTTC | 1 cut(s) | 162 |
| MseI | TTAA | 1 cut(s) | 251 |
| MspI | CCGG | 1 cut(s) | 36 |
| MspR9I | CCNGG | 1 cut(s) | 37 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 433, 442 |
| NciI | CCSGG | 1 cut(s) | 37 |
| NlaIII | CATG | 2 cut(s) | 285, 419 |
| NmuCI | GTSAC | 1 cut(s) | 373 |
| PagI | TCATGA | 1 cut(s) | 415 |
| PdmI | GAANNNNTTC | 1 cut(s) | 162 |
| PfeI | GAWTC | 1 cut(s) | 303 |
| PkrI | GCNGC | 2 cut(s) | 16, 429 |
| PleI | GAGTC | 2 cut(s) | 370, 420 |
| PpsI | GAGTC | 2 cut(s) | 370, 420 |
| RsaI | GTAC | 2 cut(s) | 204, 270 |
| RsaNI | GTAC | 2 cut(s) | 203, 269 |
| SaqAI | TTAA | 1 cut(s) | 251 |
| SatI | GCNGC | 2 cut(s) | 15, 428 |
| SchI | GAGTC | 2 cut(s) | 370, 421 |
| ScrFI | CCNGG | 1 cut(s) | 37 |
| SduI | GDGCHC | 1 cut(s) | 363 |
| SetI | ASST | 8 cut(s) | 251, 270, 319, 327, 429, 438, 484, 490 |
| SfaNI | GCATC | 1 cut(s) | 460 |
| SfcI | CTRYAG | 1 cut(s) | 183 |
| SmlI | CTYRAG | 1 cut(s) | 384 |
| SmoI | CTYRAG | 1 cut(s) | 384 |
| Sse9I | AATT | 3 cut(s) | 84, 277, 395 |
| SspI | AATATT | 1 cut(s) | 229 |
| SspMI | CTAG | 2 cut(s) | 119, 290 |
| StyD4I | CCNGG | 1 cut(s) | 35 |
| StyI | CCWWGG | 1 cut(s) | 30 |
| TaaI | ACNGT | 1 cut(s) | 60 |
| TaiI | ACGT | 2 cut(s) | 251, 484 |
| TaqI | TCGA | 3 cut(s) | 55, 76, 321 |
| TasI | AATT | 3 cut(s) | 84, 277, 395 |
| TfiI | GAWTC | 1 cut(s) | 303 |
| Tru1I | TTAA | 1 cut(s) | 251 |
| Tru9I | TTAA | 1 cut(s) | 251 |
| TseFI | GTSAC | 1 cut(s) | 373 |
| TseI | GCWGC | 2 cut(s) | 14, 427 |
| Tsp45I | GTSAC | 1 cut(s) | 373 |
| TspDTI | ATGAA | 4 cut(s) | 270, 309, 357, 432 |
| XapI | RAATTY | 1 cut(s) | 277 |
| XmnI | GAANNNNTTC | 1 cut(s) | 162 |
| XspI | CTAG | 2 cut(s) | 119, 290 |