BEACH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G58230 AT1G58230 AT1G58230 |
| fragaria_vesca | FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 |
| malus_domestica | MD08G1199800.v1.1 MD08G1200500.v1.1 MD08G1200600.v1.1 MD15G1387600.v1.1 |
| prunus_persica | Prupe.1G534000_v2.0.a1 Prupe.1G534000_v2.0.a1 Prupe.1G534000_v2.0.a1 Prupe.1G534000_v2.0.a1 |
| pyrus_communis | pycom08g17380 pycom08g17390 pycom08g17400 pycom15g34760 pycom15g34770 pycom15g34780 pycom15g34790 |
| rosa_chinensis | RchiOBHm_Chr7g0235181 |
| rosa_laevigata | RLG00000001175 |
| rosa_multiflora | Rmu_co8395887.1_g000001 Rmu_sc0004657.1_g000019 |
| rosa_roxburghii | Rroxscaffold_3G00226200 |
| rosa_rugosa | Rorug07G0288800 Rorug07G0288900 |
| rosa_samantha | Rh7AG443400 Rh7BG416100 Rh7CG464500 Rh7DG432900 |
| rosa_wichuraiana | Rw7G036860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 4449, 7424, 7878 |
| AatII | GACGTC | 1 cut(s) | 44 |
| AbsI | CCTCGAGG | 1 cut(s) | 1014 |
| Acc36I | ACCTGC | 2 cut(s) | 4784, 8485 |
| Acc65I | GGTACC | 1 cut(s) | 2781 |
| AccB1I | GGYRCC | 6 cut(s) | 2781, 3671, 5517, 6171, 7463, 7633 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 6023, 7173 |
| AccBSI | CCGCTC | 1 cut(s) | 1464 |
| AccI | GTMKAC | 2 cut(s) | 237, 4439 |
| AccII | CGCG | 3 cut(s) | 918, 6238, 9293 |
| AccIII | TCCGGA | 1 cut(s) | 3712 |
| AcoI | YGGCCR | 5 cut(s) | 49, 445, 4236, 7000, 9514 |
| AcvI | CACGTG | 1 cut(s) | 6038 |
| AcyI | GRCGYC | 2 cut(s) | 41, 7164 |
| AflII | CTTAAG | 2 cut(s) | 1657, 2141 |
| AflIII | ACRYGT | 6 cut(s) | 1835, 3828, 4470, 6777, 7771, 9332 |
| AgeI | ACCGGT | 1 cut(s) | 253 |
| AhdI | GACNNNNNGTC | 3 cut(s) | 3393, 3491, 3660 |
| AhlI | ACTAGT | 1 cut(s) | 7223 |
| AjiI | CACGTC | 1 cut(s) | 7772 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 6240, 6272, 8716, 8748, 8853, 8885 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1038, 1070 |
| Alw21I | GWGCWC | 7 cut(s) | 2053, 4741, 4813, 6037, 6376, 7070, 7993 |
| Alw44I | GTGCAC | 1 cut(s) | 2049 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1808, 7796 |
| Ama87I | CYCGRG | 4 cut(s) | 778, 1014, 3878, 7800 |
| Aor13HI | TCCGGA | 1 cut(s) | 3712 |
| ApaLI | GTGCAC | 1 cut(s) | 2049 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 1182, 1214, 7127, 7159, 7570, 7602 |
| AseI | ATTAAT | 2 cut(s) | 575, 3113 |
| AsiGI | ACCGGT | 1 cut(s) | 253 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 480, 1787, 1867, 4788, 7500, 9156 |
| Asp718I | GGTACC | 1 cut(s) | 2781 |
| AspLEI | GCGC | 7 cut(s) | 918, 1807, 6240, 8525, 8670, 8714, 9293 |
| AsuC2I | CCSGG | 1 cut(s) | 5675 |
| AsuII | TTCGAA | 1 cut(s) | 34 |
| AsuNHI | GCTAGC | 1 cut(s) | 5141 |
| AvaI | CYCGRG | 4 cut(s) | 778, 1014, 3878, 7800 |
| AxyI | CCTNAGG | 3 cut(s) | 1809, 1850, 4706 |
| BaeGI | GKGCMC | 4 cut(s) | 2053, 2604, 6176, 7466 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 6764, 6797 |
| BalI | TGGCCA | 4 cut(s) | 51, 447, 4238, 7002 |
| BamHI | GGATCC | 3 cut(s) | 111, 823, 6497 |
| BanI | GGYRCC | 6 cut(s) | 2781, 3671, 5517, 6171, 7463, 7633 |
| BanII | GRGCYC | 4 cut(s) | 619, 4741, 7070, 8366 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 4776, 4808 |
| BauI | CACGAG | 3 cut(s) | 1292, 2133, 6737 |
| BbrPI | CACGTG | 1 cut(s) | 6038 |
| BbsI | GAAGAC | 7 cut(s) | 665, 4667, 5631, 7191, 7197, 7947, 8724 |
| Bbv12I | GWGCWC | 7 cut(s) | 2053, 4741, 4813, 6037, 6376, 7070, 7993 |
| BbvCI | CCTCAGC | 1 cut(s) | 4308 |
| BceAI | ACGGC | 3 cut(s) | 585, 5810, 7550 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 8664, 8698 |
| BciVI | GTATCC | 3 cut(s) | 6765, 7170, 7786 |
| BclI | TGATCA | 2 cut(s) | 2919, 7405 |
| BcnI | CCSGG | 1 cut(s) | 5675 |
| BcuI | ACTAGT | 1 cut(s) | 7223 |
| BfmI | CTRYAG | 9 cut(s) | 1679, 2942, 3500, 6081, 6211, 6633, 8481, 9350, 9720 |
| BfoI | RGCGCY | 2 cut(s) | 1808, 8526 |
| BfrI | CTTAAG | 2 cut(s) | 1657, 2141 |
| BfuAI | ACCTGC | 2 cut(s) | 4784, 8485 |
| BfuI | GTATCC | 3 cut(s) | 6765, 7170, 7786 |
| BglII | AGATCT | 3 cut(s) | 1130, 2240, 6215 |
| BlpI | GCTNAGC | 2 cut(s) | 1460, 2544 |
| BmcAI | AGTACT | 3 cut(s) | 709, 1470, 6531 |
| BmeRI | GACNNNNNGTC | 3 cut(s) | 3393, 3491, 3660 |
| BmeT110I | CYCGRG | 4 cut(s) | 778, 1014, 3878, 7800 |
| BmgBI | CACGTC | 1 cut(s) | 7772 |
| BmrI | ACTGGG | 4 cut(s) | 256, 4105, 4289, 4641 |
| BmtI | GCTAGC | 1 cut(s) | 5145 |
| BmuI | ACTGGG | 4 cut(s) | 256, 4105, 4289, 4641 |
| BpiI | GAAGAC | 7 cut(s) | 665, 4667, 5631, 7191, 7197, 7947, 8724 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2568, 2600, 7052, 7084 |
| BpmI | CTGGAG | 9 cut(s) | 1842, 1967, 2570, 4027, 5400, 6595, 7099, 7365, 7831 |
| Bpu10I | CCTNAGC | 3 cut(s) | 3936, 4308, 7011 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1460, 2544 |
| Bpu14I | TTCGAA | 1 cut(s) | 34 |
| BpuEI | CTTGAG | 6 cut(s) | 203, 1416, 2812, 5026, 9397, 9629 |
| BpuMI | CCSGG | 1 cut(s) | 5675 |
| Bsa29I | ATCGAT | 1 cut(s) | 5706 |
| BsaAI | YACGTR | 2 cut(s) | 6038, 8747 |
| BsaBI | GATNNNNATC | 7 cut(s) | 1151, 3732, 4497, 5319, 6579, 8028, 9453 |
| BsaHI | GRCGYC | 2 cut(s) | 41, 7164 |
| BsaI | GGTCTC | 2 cut(s) | 4636, 8079 |
| BsaWI | WCCGGW | 3 cut(s) | 44, 253, 3712 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1757, 1787 |
| Bse118I | RCCGGY | 2 cut(s) | 253, 1345 |
| Bse21I | CCTNAGG | 3 cut(s) | 1809, 1850, 4706 |
| Bse3DI | GCAATG | 6 cut(s) | 1386, 2743, 2789, 6156, 6329, 6487 |
| Bse8I | GATNNNNATC | 7 cut(s) | 1151, 3732, 4497, 5319, 6579, 8028, 9453 |
| BseAI | TCCGGA | 1 cut(s) | 3712 |
| BseCI | ATCGAT | 1 cut(s) | 5706 |
| BseJI | GATNNNNATC | 7 cut(s) | 1151, 3732, 4497, 5319, 6579, 8028, 9453 |
| BseMI | GCAATG | 6 cut(s) | 1386, 2743, 2789, 6156, 6329, 6487 |
| BseRI | GAGGAG | 6 cut(s) | 211, 3164, 4296, 6177, 6755, 7828 |
| BseSI | GKGCMC | 4 cut(s) | 2053, 2604, 6176, 7466 |
| BseYI | CCCAGC | 1 cut(s) | 5749 |
| BsgI | GTGCAG | 2 cut(s) | 81, 4475 |
| Bsh1236I | CGCG | 3 cut(s) | 918, 6238, 9293 |
| BshNI | GGYRCC | 6 cut(s) | 2781, 3671, 5517, 6171, 7463, 7633 |
| BshTI | ACCGGT | 1 cut(s) | 253 |
| BshVI | ATCGAT | 1 cut(s) | 5706 |
| BsiHKAI | GWGCWC | 7 cut(s) | 2053, 4741, 4813, 6037, 6376, 7070, 7993 |
| BsiHKCI | CYCGRG | 4 cut(s) | 778, 1014, 3878, 7800 |
| BsiSI | CCGG | 9 cut(s) | 45, 254, 1346, 2568, 3713, 4483, 4722, 5674, 9636 |
| BslFI | GGGAC | 9 cut(s) | 1831, 3270, 3400, 4989, 4993, 5690, 5988, 7751, 8796 |
| BsmBI | CGTCTC | 3 cut(s) | 5525, 7208, 8186 |
| BsmFI | GGGAC | 9 cut(s) | 1831, 3270, 3400, 4989, 4993, 5690, 5988, 7751, 8796 |
| BsmI | GAATGC | 7 cut(s) | 555, 1976, 2154, 2577, 3048, 6722, 9680 |
| Bso31I | GGTCTC | 2 cut(s) | 4636, 8079 |
| BsoBI | CYCGRG | 4 cut(s) | 778, 1014, 3878, 7800 |
| Bsp119I | TTCGAA | 1 cut(s) | 34 |
| Bsp13I | TCCGGA | 1 cut(s) | 3712 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1460, 2544 |
| Bsp19I | CCATGG | 4 cut(s) | 2292, 6809, 7467, 9574 |
| BspDI | ATCGAT | 1 cut(s) | 5706 |
| BspEI | TCCGGA | 1 cut(s) | 3712 |
| BspFNI | CGCG | 3 cut(s) | 918, 6238, 9293 |
| BspHI | TCATGA | 2 cut(s) | 2436, 7296 |
| BspMAI | CTGCAG | 5 cut(s) | 1683, 2946, 6085, 6637, 9354 |
| BspMI | ACCTGC | 2 cut(s) | 4784, 8485 |
| BspOI | GCTAGC | 1 cut(s) | 5145 |
| BspQI | GCTCTTC | 3 cut(s) | 2942, 3553, 6709 |
| BspT104I | TTCGAA | 1 cut(s) | 34 |
| BspT107I | GGYRCC | 6 cut(s) | 2781, 3671, 5517, 6171, 7463, 7633 |
| BspTI | CTTAAG | 2 cut(s) | 1657, 2141 |
| BspTNI | GGTCTC | 2 cut(s) | 4636, 8079 |
| BsrBI | CCGCTC | 1 cut(s) | 1464 |
| BsrDI | GCAATG | 6 cut(s) | 1386, 2743, 2789, 6156, 6329, 6487 |
| BsrFI | RCCGGY | 2 cut(s) | 253, 1345 |
| BssAI | RCCGGY | 2 cut(s) | 253, 1345 |
| BssNAI | GTATAC | 2 cut(s) | 238, 4440 |
| BssNI | GRCGYC | 2 cut(s) | 41, 7164 |
| BssSI | CACGAG | 3 cut(s) | 1292, 2133, 6737 |
| Bst1107I | GTATAC | 2 cut(s) | 238, 4440 |
| Bst2BI | CACGAG | 3 cut(s) | 1292, 2133, 6737 |
| BstACI | GRCGYC | 2 cut(s) | 41, 7164 |
| BstAFI | CTTAAG | 2 cut(s) | 1657, 2141 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 6542, 7796 |
| BstBAI | YACGTR | 2 cut(s) | 6038, 8747 |
| BstBI | TTCGAA | 1 cut(s) | 34 |
| BstDSI | CCRYGG | 4 cut(s) | 2292, 6809, 7467, 9574 |
| BstEII | GGTNACC | 3 cut(s) | 2663, 4527, 9569 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1190, 4847 |
| BstFNI | CGCG | 3 cut(s) | 918, 6238, 9293 |
| BstH2I | RGCGCY | 2 cut(s) | 1808, 8526 |
| BstHHI | GCGC | 7 cut(s) | 918, 1807, 6240, 8525, 8670, 8714, 9293 |
| BstNSI | RCATGY | 8 cut(s) | 305, 1169, 1839, 3832, 4474, 4603, 6781, 9279 |
| BstPI | GGTNACC | 3 cut(s) | 2663, 4527, 9569 |
| BstSFI | CTRYAG | 9 cut(s) | 1679, 2942, 3500, 6081, 6211, 6633, 8481, 9350, 9720 |
| BstSLI | GKGCMC | 4 cut(s) | 2053, 2604, 6176, 7466 |
| BstSNI | TACGTA | 1 cut(s) | 8747 |
| BstUI | CGCG | 3 cut(s) | 918, 6238, 9293 |
| BstV2I | GAAGAC | 7 cut(s) | 665, 4667, 5631, 7191, 7197, 7947, 8724 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2500 |
| BstZ17I | GTATAC | 2 cut(s) | 238, 4440 |
| Bsu15I | ATCGAT | 1 cut(s) | 5706 |
| Bsu36I | CCTNAGG | 3 cut(s) | 1809, 1850, 4706 |
| BsuI | GTATCC | 3 cut(s) | 6765, 7170, 7786 |
| BsuTUI | ATCGAT | 1 cut(s) | 5706 |
| BtgI | CCRYGG | 4 cut(s) | 2292, 6809, 7467, 9574 |
| BtgZI | GCGATG | 3 cut(s) | 6219, 8126, 9722 |
| BtrI | CACGTC | 1 cut(s) | 7772 |
| BtsI | GCAGTG | 9 cut(s) | 1671, 2959, 4826, 5561, 6115, 6356, 6630, 7599, 8819 |
| BveI | ACCTGC | 2 cut(s) | 4784, 8485 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1808, 7796 |
| CciI | TCATGA | 2 cut(s) | 2436, 7296 |
| CfoI | GCGC | 7 cut(s) | 918, 1807, 6240, 8525, 8670, 8714, 9293 |
| Cfr10I | RCCGGY | 2 cut(s) | 253, 1345 |
| ClaI | ATCGAT | 1 cut(s) | 5706 |
| CseI | GACGC | 5 cut(s) | 2926, 4056, 6943, 7172, 9114 |
| CsiI | ACCWGGT | 1 cut(s) | 100 |
| CspAI | ACCGGT | 1 cut(s) | 253 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 5101, 5136, 8449, 8484 |
| DraI | TTTAAA | 3 cut(s) | 1033, 2113, 4150 |
| DriI | GACNNNNNGTC | 3 cut(s) | 3393, 3491, 3660 |
| EaeI | YGGCCR | 5 cut(s) | 49, 445, 4236, 7000, 9514 |
| Eam1105I | GACNNNNNGTC | 3 cut(s) | 3393, 3491, 3660 |
| Ecl136II | GAGCTC | 2 cut(s) | 4739, 7068 |
| Eco105I | TACGTA | 1 cut(s) | 8747 |
| Eco147I | AGGCCT | 2 cut(s) | 666, 1625 |
| Eco24I | GRGCYC | 4 cut(s) | 619, 4741, 7070, 8366 |
| Eco31I | GGTCTC | 2 cut(s) | 4636, 8079 |
| Eco32I | GATATC | 2 cut(s) | 167, 8030 |
| Eco53kI | GAGCTC | 2 cut(s) | 4739, 7068 |
| Eco72I | CACGTG | 1 cut(s) | 6038 |
| Eco81I | CCTNAGG | 3 cut(s) | 1809, 1850, 4706 |
| Eco88I | CYCGRG | 4 cut(s) | 778, 1014, 3878, 7800 |
| Eco91I | GGTNACC | 3 cut(s) | 2663, 4527, 9569 |
| EcoICRI | GAGCTC | 2 cut(s) | 4739, 7068 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1190, 4847 |
| EcoO109I | RGGNCCY | 4 cut(s) | 3257, 3883, 5007, 8398 |
| EcoO65I | GGTNACC | 3 cut(s) | 2663, 4527, 9569 |
| EcoRI | GAATTC | 5 cut(s) | 724, 984, 5348, 8284, 9601 |
| EcoRV | GATATC | 2 cut(s) | 167, 8030 |
| EcoT22I | ATGCAT | 4 cut(s) | 1702, 2282, 3991, 4257 |
| EcoT38I | GRGCYC | 4 cut(s) | 619, 4741, 7070, 8366 |
| Esp3I | CGTCTC | 3 cut(s) | 5525, 7208, 8186 |
| FaqI | GGGAC | 9 cut(s) | 1831, 3270, 3400, 4989, 4993, 5690, 5988, 7751, 8796 |
| FauI | CCCGC | 6 cut(s) | 355, 605, 2725, 2764, 2966, 4517 |
| FauNDI | CATATG | 1 cut(s) | 4797 |
| FbaI | TGATCA | 2 cut(s) | 2919, 7405 |
| FblI | GTMKAC | 2 cut(s) | 237, 4439 |
| FriOI | GRGCYC | 4 cut(s) | 619, 4741, 7070, 8366 |
| GlaI | GCGC | 7 cut(s) | 917, 1806, 6239, 8524, 8669, 8713, 9292 |
| GsaI | CCCAGC | 1 cut(s) | 5753 |
| GsuI | CTGGAG | 9 cut(s) | 1842, 1967, 2570, 4027, 5400, 6595, 7099, 7365, 7831 |
| HaeII | RGCGCY | 2 cut(s) | 1808, 8526 |
| HapII | CCGG | 9 cut(s) | 45, 254, 1346, 2568, 3713, 4483, 4722, 5674, 9636 |
| HgaI | GACGC | 5 cut(s) | 2926, 4056, 6943, 7172, 9114 |
| HhaI | GCGC | 7 cut(s) | 918, 1807, 6240, 8525, 8670, 8714, 9293 |
| Hin1I | GRCGYC | 2 cut(s) | 41, 7164 |
| Hin6I | GCGC | 7 cut(s) | 916, 1805, 6238, 8523, 8668, 8712, 9291 |
| HinP1I | GCGC | 7 cut(s) | 916, 1805, 6238, 8523, 8668, 8712, 9291 |
| HincII | GTYRAC | 9 cut(s) | 802, 1354, 2203, 3643, 5370, 8202, 8383, 8720, 8811 |
| HindII | GTYRAC | 9 cut(s) | 802, 1354, 2203, 3643, 5370, 8202, 8383, 8720, 8811 |
| HindIII | AAGCTT | 4 cut(s) | 563, 3852, 6654, 9407 |
| HpaI | GTTAAC | 3 cut(s) | 3643, 5370, 8383 |
| HpaII | CCGG | 9 cut(s) | 45, 254, 1346, 2568, 3713, 4483, 4722, 5674, 9636 |
| Hpy99I | CGWCG | 5 cut(s) | 2965, 5336, 6885, 6959, 8552 |
| Hsp92I | GRCGYC | 2 cut(s) | 41, 7164 |
| HspAI | GCGC | 7 cut(s) | 916, 1805, 6238, 8523, 8668, 8712, 9291 |
| Kpn2I | TCCGGA | 1 cut(s) | 3712 |
| KpnI | GGTACC | 1 cut(s) | 2785 |
| KroI | GCCGGC | 1 cut(s) | 1345 |
| KroNI | GCCGGC | 1 cut(s) | 1347 |
| Ksp22I | TGATCA | 2 cut(s) | 2919, 7405 |
| KspAI | GTTAAC | 3 cut(s) | 3643, 5370, 8383 |
| LguI | GCTCTTC | 3 cut(s) | 2942, 3553, 6709 |
| MabI | ACCWGGT | 1 cut(s) | 100 |
| MbiI | CCGCTC | 1 cut(s) | 1464 |
| MfeI | CAATTG | 4 cut(s) | 2100, 8568, 8652, 8998 |
| MlsI | TGGCCA | 4 cut(s) | 51, 447, 4238, 7002 |
| MluNI | TGGCCA | 4 cut(s) | 51, 447, 4238, 7002 |
| MmeI | TCCRAC | 6 cut(s) | 109, 322, 619, 4981, 6271, 7966 |
| Mox20I | TGGCCA | 4 cut(s) | 51, 447, 4238, 7002 |
| Mph1103I | ATGCAT | 4 cut(s) | 1702, 2282, 3991, 4257 |
| MroI | TCCGGA | 1 cut(s) | 3712 |
| MroNI | GCCGGC | 1 cut(s) | 1345 |
| MroXI | GAANNNNTTC | 6 cut(s) | 480, 1787, 1867, 4788, 7500, 9156 |
| MscI | TGGCCA | 4 cut(s) | 51, 447, 4238, 7002 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1164, 2266, 4036, 5568, 6915, 9069 |
| Msp20I | TGGCCA | 4 cut(s) | 51, 447, 4238, 7002 |
| MspA1I | CMGCKG | 5 cut(s) | 350, 6316, 6595, 7631, 9389 |
| MspCI | CTTAAG | 2 cut(s) | 1657, 2141 |
| MspI | CCGG | 9 cut(s) | 45, 254, 1346, 2568, 3713, 4483, 4722, 5674, 9636 |
| MunI | CAATTG | 4 cut(s) | 2100, 8568, 8652, 8998 |
| Mva1269I | GAATGC | 7 cut(s) | 555, 1976, 2154, 2577, 3048, 6722, 9680 |
| MvnI | CGCG | 3 cut(s) | 918, 6238, 9293 |
| NaeI | GCCGGC | 1 cut(s) | 1347 |
| NciI | CCSGG | 1 cut(s) | 5675 |
| NcoI | CCATGG | 4 cut(s) | 2292, 6809, 7467, 9574 |
| NdeI | CATATG | 1 cut(s) | 4797 |
| NgoMIV | GCCGGC | 1 cut(s) | 1345 |
| NheI | GCTAGC | 1 cut(s) | 5141 |
| NmeAIII | GCCGAG | 3 cut(s) | 557, 2066, 9400 |
| NsiI | ATGCAT | 4 cut(s) | 1702, 2282, 3991, 4257 |
| NspI | RCATGY | 8 cut(s) | 305, 1169, 1839, 3832, 4474, 4603, 6781, 9279 |
| NspV | TTCGAA | 1 cut(s) | 34 |
| PaeR7I | CTCGAG | 1 cut(s) | 1014 |
| PagI | TCATGA | 2 cut(s) | 2436, 7296 |
| PasI | CCCWGGG | 1 cut(s) | 8352 |
| PceI | AGGCCT | 2 cut(s) | 666, 1625 |
| PciI | ACATGT | 4 cut(s) | 1835, 3828, 4470, 6777 |
| PciSI | GCTCTTC | 3 cut(s) | 2942, 3553, 6709 |
| PctI | GAATGC | 7 cut(s) | 555, 1976, 2154, 2577, 3048, 6722, 9680 |
| PdiI | GCCGGC | 1 cut(s) | 1347 |
| PdmI | GAANNNNTTC | 6 cut(s) | 480, 1787, 1867, 4788, 7500, 9156 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 6023, 7173 |
| PfoI | TCCNGGA | 2 cut(s) | 5866, 6611 |
| PinAI | ACCGGT | 1 cut(s) | 253 |
| PmaCI | CACGTG | 1 cut(s) | 6038 |
| PmlI | CACGTG | 1 cut(s) | 6038 |
| Ppu21I | YACGTR | 2 cut(s) | 6038, 8747 |
| PpuMI | RGGWCCY | 3 cut(s) | 3257, 3883, 5007 |
| PscI | ACATGT | 4 cut(s) | 1835, 3828, 4470, 6777 |
| PshBI | ATTAAT | 2 cut(s) | 575, 3113 |
| PsiI | TTATAA | 3 cut(s) | 4449, 7424, 7878 |
| Psp124BI | GAGCTC | 2 cut(s) | 4741, 7070 |
| Psp5II | RGGWCCY | 3 cut(s) | 3257, 3883, 5007 |
| PspCI | CACGTG | 1 cut(s) | 6038 |
| PspEI | GGTNACC | 3 cut(s) | 2663, 4527, 9569 |
| PspFI | CCCAGC | 1 cut(s) | 5749 |
| PspPPI | RGGWCCY | 3 cut(s) | 3257, 3883, 5007 |
| PspXI | VCTCGAGB | 1 cut(s) | 1014 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1354, 1386 |
| PstI | CTGCAG | 5 cut(s) | 1683, 2946, 6085, 6637, 9354 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1808, 7796 |
| PvuII | CAGCTG | 3 cut(s) | 6316, 6595, 9389 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1164, 2266, 4036, 5568, 6915, 9069 |
| SacI | GAGCTC | 2 cut(s) | 4741, 7070 |
| SapI | GCTCTTC | 3 cut(s) | 2942, 3553, 6709 |
| ScaI | AGTACT | 3 cut(s) | 709, 1470, 6531 |
| SexAI | ACCWGGT | 1 cut(s) | 100 |
| SfcI | CTRYAG | 9 cut(s) | 1679, 2942, 3500, 6081, 6211, 6633, 8481, 9350, 9720 |
| Sfr274I | CTCGAG | 1 cut(s) | 1014 |
| SfuI | TTCGAA | 1 cut(s) | 34 |
| SlaI | CTCGAG | 1 cut(s) | 1014 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1164, 2266, 4036, 5568, 6915, 9069 |
| SmlI | CTYRAG | 9 cut(s) | 218, 1014, 1431, 1657, 2141, 2827, 5041, 9376, 9608 |
| SmoI | CTYRAG | 9 cut(s) | 218, 1014, 1431, 1657, 2141, 2827, 5041, 9376, 9608 |
| SnaBI | TACGTA | 1 cut(s) | 8747 |
| SpeI | ACTAGT | 1 cut(s) | 7223 |
| SseBI | AGGCCT | 2 cut(s) | 666, 1625 |
| SspI | AATATT | 5 cut(s) | 7, 840, 7528, 7641, 7712 |
| SstI | GAGCTC | 2 cut(s) | 4741, 7070 |
| StuI | AGGCCT | 2 cut(s) | 666, 1625 |
| TatI | WGTACW | 5 cut(s) | 419, 707, 1468, 6529, 7252 |
| TauI | GCSGC | 3 cut(s) | 3440, 7634, 9519 |
| TspGWI | ACGGA | 8 cut(s) | 104, 2697, 4457, 5733, 6898, 7232, 8606, 9714 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 6023, 7173 |
| Vha464I | CTTAAG | 2 cut(s) | 1657, 2141 |
| VneI | GTGCAC | 1 cut(s) | 2049 |
| VspI | ATTAAT | 2 cut(s) | 575, 3113 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1190, 4847 |
| XbaI | TCTAGA | 1 cut(s) | 5020 |
| XceI | RCATGY | 8 cut(s) | 305, 1169, 1839, 3832, 4474, 4603, 6781, 9279 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 6697 |
| XhoI | CTCGAG | 1 cut(s) | 1014 |
| XmiI | GTMKAC | 2 cut(s) | 237, 4439 |
| XmnI | GAANNNNTTC | 6 cut(s) | 480, 1787, 1867, 4788, 7500, 9156 |
| ZraI | GACGTC | 1 cut(s) | 42 |
| ZrmI | AGTACT | 3 cut(s) | 709, 1470, 6531 |
| Zsp2I | ATGCAT | 4 cut(s) | 1702, 2282, 3991, 4257 |