MD08G1200600.v1.1

BEACH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0002031
Physical Location & Seq
Forward (+)
25996960 .. 26025557
28598 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1200600.v1.1.491

Sequence Viewer

Length: 9132 bp
ATGGAGTGGACTGGACTCTTGCAACAAATACTTGTATATGTGGTGTCAATAATATATAGTTTCATTGATTTAAATTCAAATGTATATGAGAGAGGTCAGTTGTGCAGTAATACTATAGGTTTTGTTTCAAGGGGTTGTGCATCACCAGTTGGCTCTTCTGGTAAGGTTCCTTCCAGTGAAATAAGGTTACGATGGCATCAGAGGGCAGTTGTGTCTGTGATGGAAGCTGGTGGACTTAATTGGTTAGTAGGTAAGCTGCTGCGTGTAAGCAGAAGGTTGAGCATGAAAGAACAGTGGACGGATACCTCACTTCTGTATTTGTCTTTAAGAATTCTTCATTCGACATTAGCACAGAATCCTCGTGGTCAAAATCATTTTAAAAGCATTGGAGGACTTGAAGTTCTGTTGGATGGTCTTGGAATACCGTCAAGTAATGTGCTAATACTGAAAAGTTCTGCTTCTGCCATTGAGAAAAGATATGAGAACCCCTTGCTAAAAAATTTCCAGCTCCATGTTCTCTCTCTGGAAGTTCTCAAAGAGGCTGTCTATGGGAATATCAGCAATTTGCAATTTCTATGTGAAAACGGGAGGGTTCAAAAATTCGCAAATAGCTTTTGTTCGCCTGCTTTCTTGTTTCAAGAGTACAAACAGCAGACCAAGAATATTCCTGGTCAGCCTGATTTCCAAACGCCGATGATTGACTTTGGAAGTGAGAATACTGTGGAAAACCATATAACAGAGACTTCTGTTGCACTGCCTGCCAATGATTATTTCTCTCAACTTTGGAGTGATTATGCTGTTAAGCTGAGCAGAGTATTTTGTTCTTTTCTTCCTGCTTCAGAAGATATTAAATCTCATGATCTTGAAACATCCACTGGTCAAGCTACGGTGGCAGTCTCTTCATTGTACGGTGAACTTTCGATCAAATGGATTGTGAGGGTTCTTCTTACAGTGTTCCCCTGCATTAAGGCCTGTTCAAATGAAAACGAACTGCCAAGCCAATTAAGGGTCTTTGTCAGTACTCTGCAGCATTGCGTTTTAAATGCATTTAGGAAGGTTCTTGTTTCATCTCCAGTGTCACTCAAAGTATTTCGGGAAGAGGGAATCTGGGAACTCATATTTTCTGAGAATTTTTTCTACTTTGGACCAGCATCTGATGACCTTTGCGGAGAGTGTTGCACTTATTATGAGTCCCCAAGGAACCTTGAACTACTCTCTGCTTCTAGTGGCATCAACAGTCAAGCAAAAGTTTGTGGGATTGAAATTCTCCAAATGGAAGTGATTTCATTTGTGGAGTTTGCTGCAACTTCTAGTGGAAGTGCTCATAACTTGCCTGAATTATCTGCTTTATTAGATGCCCTTGAACACTGTGCTTGCAGTCCTGAAGTTGCTAGTGTTCTTGCCAAGAGTCTGCGTCGCGTGTTACAGCTTTCATCTGAGAAAACTGTTGCTTCTTTTAAGGCAGTTAATGCATTTCCTCGTGTGCTTAAAGTTGCTTGCATTCAAGCCCAAGAATCAAGAAGGGTTGGAAATACAAGCCCTAATGTTGATGAAGCGATGCCTAGTCATCAGGGATCCAAATCACATCAGACAACGCAAAGATGGCTTAAATGCATGGAGACATCCATGGAGCTCTATATGGAATTTTTCTCAACAGCAGAAGATGCTAGAAGTTTGGTTCTGCGTAGCGTCGAATGTATTGGTTATTTATTTGATTTATTCTGGGAAGAAGGTTTGAGGGATAAGGTGCTTAGGCATATATTTGAGCTGATGAAGACTGTACCATCATCTGAAAAGGATCAAACAGCAAAGTTACAGTTATTTTCTAAATACTTGGAAACATTCACTCAAATAAAGGAACGAGAGAAAAGCTTTGCTGAACTGTCTATCAATTTACTGGTCGGAATGAGAGATATGCTCAAGATTGATCCTGTGTACTATCAGACTTTATTTCGTGACGGAGAGTGCTTTTTGCACGTTGTCTCTTTACTAAATGGCAACCTTGAGGAGGCTAGTGGAGAAAACTTGGTTCTGAATGTTCTTCAAACTCTTACCTGTCTGCTTGCAGGCAATGATGCTTCAAAGGCTACATTTAGAGTTCTTGCAGGCAAGGGATACCAGACATTGCAAAGCTTACTGTTGGAGTCTTGTCAGTCACGCTCAAGTGAAGGACTTTTGAATGCTTTGCTTCATATGCTTGTTGATGGAAAGTTTGATATGAAATCAGGCCCTAAAATAAAGAATGAAGATGTGATCATACTTTATCTGCGTGTTTTGCGGGAGAGCAGTGACTCGTTGCAGCATAACGGGCTGGATGTGTTTCAACAACTACTGAGGGATTCCATATCCAATCGGGCTTCTTGCGTCAGAGCGGGGATGCTTAATTTTCTTCTTGATTGGTTTTCACAAGAAGACAATGATAGTGTCATCTTGAAAATTGCCCAACTAATTCAGGTCGTTGGTGGACATAGCACATCTGGAAAGGACATTCGCAAAATCTTTGCACTTCTCCGAAGTGAGAAAATTGGGAATCAGCAGAAGTATTGCTCACTATTGTTGTCCAGTGTTTTGTCAATGCTAAATGTAAAGGGTCCTACTGCCTTCTTTGACTTCACTGGGAATGATTCTGGGATCATAATAAAAACGCCTGTGCAGTGGCCTCTGAATAAGGGATTTTCTTTTTCATGTTGGCTTCGTGTAGAGAATTTCCCCAGAAATGGAAAAATGGGTCTTTTCAATTTTCTTGCAGAAAATGGAAGAGGTTGTATGGCTGCACTTGCAAAGGACAAGTTTCTATATGAGTCAATGAATCTGAAGCGACAATCGGTCCAGTTACAGGTTAATATTGTTAGAAAGAAATGGCATTTTCTATGTATAACTCATAGCATTGGAAGAGCATTTTCTGGGGGTAGCTTATTGAGGTGCTATGTGGATGGTGATCTCGTTTCTTCTGAAAGATGCAGATATGCCAAAGTTAATGAATTATTAACAAGTTGTAGAATTGGCGCAAAATTTGATATTCCTCTGTATGAAGATGATTTGGCTCTGGAATCTGTAAAAGATTCACATCCTTACCTCGGTCAGATTGGTCCAGTTTATTTATTTAATGACGCCATTTCGTCTGAGCAAGTTCAGGGCATCTATTCTCTTGGGCCGAGCTACATGTATTCATTCCTTGACAATGAAGCTGCCTCATCCAAGGATAACCTGGTGCTTAGTGGGATCCTTGATGCGAAAGATGGTCTTTCATCAAAAATTATTTTTGGACTTAATGCACAGGCATGTGATGGCAGGAAACTCTTTAATGTTTCACCAATGCTGGACCATGTATCAGATAAGAACTCATTTGAAGCAACTGTGATGGTTGGCACGCAGCAATGCTCCAGACGCTTATTGCAAGAGATAATTTACTGTGTTGGAGGTGTATCAGTGTTTTTTCCTCTTATCGCGCAGTCTGAAAAATATGAAAATGAAGAAAGTGGGCAATTTGAGCATACATTGCCTGTTATCACGAGAGAGCGAGTGACTGCTGAAGTTATTGAGCTCATAGCTTCTGTTCTAGATGAGAACTTAGCTAATCAACAACAGATGCATCTTCTGTCTGGATTCTCAATACTAGGGTTCTTGTTGCAATCAGTTCCTCCTCAGCAGCTTAATTTGGAAACACTTTCGGCTTTAAAACATCTATTTAATGTCGTCGCAAACTGCGGCTTATCGGAGCTGCTTACTAAAGAGGCTATATCTAGCATATTTCTTAACCCTCTCATCTGGTTGTACACGGTATATAAGGTGCAGCTTGAATTATACATGTTTCTCATCCAGCAGTTTGATAATGACCCAAGGTTACTTAAAAGCCTTTGCCGGCTCCCTCGTGTTATTGATATAATACACCAATTTTATTGGGACAATCCAAAAACTCGATTTTCTATTGGAAGCACACCTCTCCTTCATCCCATCACAAAACAAGTTCTTGGAGAGAGACCCAGTAATGAAGAAATACGAAAAATTCGTCTTGTTTTGTTGAGCCTTGGTGAAATGAGCCTCAGGCAGAAAATTGCAGCAGCAGATATAAGAGCTTTAATAGCTTTTTTCGAAACAAGTCAGGATTCAACCTGTATCGAGGATGTTTTACATATGCTTGTTCGAGCGCTTACTCAAAAACCACTGCTTGCAGCTTTCCTGGAGCAGGCCAACCTGATTGGTGGTTGTCATATGTTTGTTAATCTTCTTCAGAGGGAATATGAACCCATTAGATTGCTCAGCTTGCAGCTCCTTGGGAGACTTTTGGTTGATCATCCATCTGAGAAGAAGGGAGCAAGATTTTTTAATCTTGCAGTTGGAAGATCTCGGTCTCCTTCAGATGGCCCAAAAAAAATTAGTATGAAGATGCAACCAATTTTTTCAGCCATGTCTGATAGGTTATTCAGATTTCCACAAACAGATAACTTGTGTGCTTCGTTGTTTGATGCTCTTCTTGGTGGTGCTAGTCCCAAACAGGTGTTACAGAAACACAACCAGGTTGAAAGGCAAAAAAGCAAAGCAAATAGCTCTCATTTTCTCCTTCCGCAAATTTTGGTTCTTATTTTTAGATTCCTGTCTGGCTGTGAGGATGCAGGTTCAAGAATGAAAATTGTCAGAGACTTACTTGATCTTCTTGATTCTGATCCTTCAAATGTTGAAGCTTTTATGGAATTTGGCTGGAATGCCTGGTTAACAGCTTGTGTCAAGCTTGGTGTATTCAAAAACTACAAAGTTAATCCCCAAGACCAAGATGATAACGAGAGAAATGAGCAAGATTTGGTGAGGAATCTGTTTGGTGTTGTTCTTTGTTACTATGTTCATTCTGTCAAAGGTGGGTGGCAACAGTTAGAAGAGACAGTGACTTTCCTACTAATGCAGTCTGAACATGGGGGCATTTCATTTCGATACTTGCTTCGAGATATTTATAAGGATTTGATCAGTAAACTTGTGGAATTGTCTTCTGAAGAGAATATCTTTATCTTGCAACCATGCCGGGACAACACGTTATACCTTCTAAGGCTGGTGGATGAGATGCTTATCTCTGAAATAGACCAAAATCTTCCGTTTCCGGCAAGTAGCTCTGACTTTTCCCTGGATTCACTGGAGCTAGAACGCCATAAAGATTATGGCTCTGCTTTGTATGAAGTGCTGGAAGGAGAAATTGATAGCCGAACATCCAGGATCCCTGGGAGTTACAAGCAGCCAATTGATAATGCAGATGACATAGTAAATGACAAGTGGTGGAATCTGTATGACAATTTGTGGATTATTATAAGTGACATGAATGGTAAGGGACCAAGCAAGATGTCACCCAAACCATCACCATCTGCAGGTCCATCTTTTGGCCAAAGAGCACGTGGCTTAGTAGAATCTCTGAATATTCCTGCTGCAGAGGTGGCTGCAGTTGTTGTATCAGGAGGGATAGGTAATGCGCTAGGTGGCAAACCTAACAAAATTGTTGATAAGGCAATGCTCTTGCGAGGGGAGAGGTGCCCAAGAATCATTTTTCGACTTGTCATCCTATATCTATGCAGATCTTCTCTGGAAAGAGCATCACGTTGCGTCCAACAGGTCATTTCGCTTTTGCCATGTCTCTTGGCAGCTGATGATGAGCAAAGCAAAAGCAGATTGCAGCTGTTCGTTTGGGCTTTGCTTGTTGTTAGGTCGCAGTTCGGAATGTTGGATGATGGTGCTCGTTTTCATGTGATATCACACTTGATTCGAGAAACTGTCAACTTTGGCAAATCAATGCTGGCTACTAGCATGATGGGGAGAGAGGACCCCTTGGACTCGGCAAATAGTGTAAAAGAAACAGGATCAATTCAGAATTTAATTCAGAGGGATCGAGTGCTAGCAGCAGTAGCTGATGAGGCAAAATATGCAAAGTCATTAGATACAGATCGTCAAAGGCAGTTGCGTGAGCTCCAATCTAGGTTAGATGAAAATTCCTCTGCAGAATCTAATACTAGGAAATCTTTTGAAGATGAGATACAGAGTAGCTTGGTCTCCATTCTTGCTTTAGATGACAGCAGAAGAGCTGTATTCCAGCTCACTCATGAGGAGGAGCAACAAAATGTTGCTGAAAAATGGATACACATGTTTCGCGCTTTGATTGATGAGAGAGGTCCATGGTCTGCTAATCCTTTTCCAAATAGTGCTGTGAGGCATTGGAAACTTGACAAGATAGAAGATGCCTGGCGACGTAGGCAAAAGTTGAGACAGAATTATCATTTTGATGAAAAGCTGTGTCATCCTTCATCATCTATGCCCACCAATGAGGTTGCACCTCCTGTTAATGAAAGTAAATCTGGTTTTGTGGGGCACATTCCTGAGCAAATGAAGCGCTTTTTGCTGAAAGGGGTATGGAAGATAATTGATGATGGGAGCTTAGAACCCAATGAAATTGATAATGAACTTGGTGGGCAGAAACCGACCCTCCCTAAAGATACTTCAGACAGCCAGTGCTCGGAATTATCCAAAGACAGCGGTGATTGGATACAGGAAAGAAAAGATTCTTCATCCTCTTCACTTGAGACAGAAACTAGTGAGGTTCTTACATCAGTTCCTTGTGTGCTTGTAACCCCAAAAAGAAAATTAGCTGGACATTTGGCAGTGATGAAAAATGTCTTGCATTTCTTTGGTGAATTTTTGGTTGAAGGTAGTGGAGGATCATCTGTTTTCAAAAACTTCCATGCTCCAAGTAATCATGATTTGGCCAAACCTGATCCAAAGCAAAAGTCTCTGAAACAGCCTCTAAATCTTGGTTTGGATTCTGAGAAGGCAGCCACAGTTGATAAATTTGATGCAATGAATGAAACTGTTCTTAATAGAAAACAATTAAAAAATATTAAGCGCCACAGGAGATGGAATATTGGCAAGATAAAAGCTGTCAGTTGGACTCGTTATTTGCTTCGATATTCCGCAATAGAGATTTTCTTCAGCGATTCATCTGCACCAGTATTTTTGAATTTTGCATCCCAGAAGGATGCAAAAGATACTGGAACCTTAATAGTTGCTACCAGAAATGAATATTTGTTTCCAAAAGGAAGTGGTCGTGACAAAAGTGGAGCTATTTCATTTGTTGATAGACGTGTCGCACTGGAGATGGCAGAAACTGCTCGAGAGAGCTGGAGGAGAAGGGATATGACAAATTTTGAATATCTAATGATTCTCAATACACTGGCTGGAAGGTCGTATAATGATTTGACCCAGTACCCTGTCTTTCCTTGGGTCTTGGCTGATTACTCCTCTGAGCTTCTTGATTTTAACAAGTCTTCCACCTTTCGGGATCTTTCAAAACCAGTTGGTGCACTTGATATGAAGCGATTTGAGGTATTTGAAGATAGGTACCGTAGCTTCACTGATCCTGATATACCTAGTTTTTACTATGGGTCTCATTACTCAAGCATGGGGATTGTGCTTTATTACCTTCTGAGATTAGAGCCGTTTACTTCTCTCCATCGAAATTTACAGGGTGGTAAATTTGATCATGCTGACCGTCTCTTTCAAAGCATTGAGGGAACATATCAGAACTGCCTTTCTAATACTAGTGATGTGAAGGAGTTAATACCGGAGTTCTTTTACATGCCAGAGTTTCTTGTCAATTCAAATGCTTATCATTTTGGTATGAAGCAAGATGGAGAACCTATTGCAGATGTTTGTCTCCCACCCTGGGCCAAGGGCTCACCTGAAGAATTTATTAACAAGAACAGAGAAGCCCTTGAAAGCGAATATGTTAGCTCTAATCTACACCATTGGATAGATTTGGTATTTGGTTACAAGCAGCGTGGAAAGCCTGCTGTGGAGGCAGCAAATATTTTTTATTACTTAACCTATGAAGGTTCTGTTGACCTGGAGACCATGGAAGATGATTTGCAAAGGTCAGCTATTGAAGACCAAATTGCAAATTTTGGCCAGACACCAATTCAGATTTTCCGTAAAAAACACCCAAGAAGAGGGCCACCTATTCCAATTGCACATCCCTTGCGCTTTGCACCTAGTTCTATTAACTTGACATCAATTGTTTGTAGTACAAGTCAAACACGGTCGGCTGCTTTATATGTTCGGACTGTGGACTCCAATGTCGTTCTTGTAAACCAGGGTCTCACCTTGTCAGTTAAGATGTGGTTGACAACCTCACTGCAATCTGGTGGAAATTTTACCTTCTCTGGCTCCCAGGATCCTTCATTTGTCGTTGGTTCTGATATTCTCTCATCTCGTAAAATTGGGAGTTCTTTAGCTGAAAATTTTGAACCTGGAGGACAATGCTTTGCAACCATGCAAACACCATCTGAGAATTTTTTGATCTCATGTGGCAATTGGGAAAATAGCTTTCAGGTTATATCGTTATATGATGGCAGAATGGTACAAAGCATCAGACAGCATAAGGATGTGGTCAGCTGTGTTGCAGTGACATCTGATGGAAGCTTCCTTGCAACTGGAAGTTATGACACTACAATTATGGTGTGGGAAGTCTTTCGAGGTAGAACCCAAGAAAAGAGACCTCGTAATACACAGACAGAAGTACCACGAAAAGATTATGTCATTGTTCAAACTCCTTTTCGTATTCTCTGTGGGCACGATGATATAATTACATGCTTGTATATCAGCGTGGACCTTGACATGGTGATCAGTGGATCAAAAGATGGAACTTGTGTTTTTCATACCCTGCAGAATGGAAGATATGTAAGATCCTTGCGCCATCCATCTGGATGTGCATTGTCAAAGCTTGTCGCTTCTCGACATGGACGGATTGTGTTTTATGCTGATGATGATCTGAGTTTGCATCTTTATTCAATTAATGGTAAACATCTTGCTTCTTCTGAATCCAATGGACGCCTCAACTGTTTTGAGTTGAGTCGGTGTGGTGAATTTTTGGTTTGTGCCGGTGACCAAGGGCAAATAGTTGTACGCTCTATGAATTCACTCGAGGTCATAAAGAAATATGATGGTGTAGGAAAGATTATAACATCTCTAACGGTGACCCCAGAAGAATGCTTCTTAGCTGGAACAAAAGATGGAACCATTCTCGTATATTCTATAGAAAATACTCAACTTCGCAAAGCTACTGTTCCTCGAAATTCAAAATCCAAACCATCATCAACAGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Beach DUF4704 DUF4800 Laminin_G_3 PH_BEACH WD40

Protein Analysis

3044

Amino Acids

342.03

Weight (kDa)

6.43

Isoelectric Point (pI)

45.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Neurobeachin PF20425 443 - 860 4.4e-216 Neurobeachin alpha solenoid region
Laminin_G_3 PF13385 873 - 1045 3.7e-08 Concanavalin A-like lectin/glucanases superfamily
DUF4704 PF15787 1112 - 1631 1.2e-160 Neurobeachin/BDCP, DUF4704 alpha solenoid region
DUF4800 PF16057 1984 - 2088 1.2e-06 Domain of unknown function (DUF4800)
PH_BEACH PF14844 2283 - 2339 9.3e-11 PH domain associated with Beige/BEACH
Beach PF02138 2383 - 2659 9.4e-124 Beige/BEACH domain
NBCH_WD40 PF20426 2680 - 3029 1.3e-200 Neurobeachin beta propeller domain
WD40_Prp19 PF24814 2759 - 2946 6.7e-11 Prp19 WD40 domain
Beta-prop_EML_2 PF23414 2769 - 2905 8.5e-07 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR5 PF25175 2769 - 2838 1.8e-08 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 2771 - 2836 1.6e-07 WDR3 first beta-propeller domain
Beta-prop_THOC3 PF25174 2771 - 2833 3.6e-07 THOC3 beta-propeller domain
Beta-prop_TEP1_2nd PF25047 2792 - 2947 5.2e-08 TEP-1 second beta-propeller
WD40 PF00400 2794 - 2830 9.5e-08 WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1 PF24105 2794 - 2947 6.5e-08 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR5 PF25175 2860 - 3018 4.3e-09 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 2864 - 3027 1.1e-09 THOC3 beta-propeller domain
WD40_WDHD1_1st PF24817 2867 - 3029 9e-07 WDHD1 first WD40 domain
WDR55 PF24796 2867 - 3022 3.1e-07 WDR55
Beta-prop_EML_2 PF23414 2925 - 3031 2.2e-06 Echinoderm microtubule-associated protein second beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 4947, 5294, 8987
AasI GACNNNNNNGTC 1 cut(s) 8102
Acc36I ACCTGC 2 cut(s) 4604, 5342
Acc65I GGTACC 1 cut(s) 7368
AccB1I GGYRCC 2 cut(s) 5511, 7368
AccB7I CCANNNNNTGG 1 cut(s) 5363
AccBSI CCGCTC 1 cut(s) 2372
AccII CGCG 3 cut(s) 1419, 3449, 6126
AciI CCGC 7 cut(s) 1167, 2278, 2372, 3708, 4565, 6507, 6942
AcoI YGGCCR 3 cut(s) 5365, 6735, 7933
AcvI CACGTG 1 cut(s) 5378
AcyI GRCGYC 2 cut(s) 3111, 8857
AfeI AGCGCT 2 cut(s) 4149, 6365
AflIII ACRYGT 5 cut(s) 3162, 3807, 5022, 6117, 7111
AhdI GACNNNNNGTC 1 cut(s) 2825
AhlI ACTAGT 2 cut(s) 6563, 7568
AjiI CACGTC 1 cut(s) 7112
AjuI GAANNNNNNNTTGG 2 cut(s) 755, 787
AloI GAACNNNNNNTCC 2 cut(s) 384, 416
Alw21I GWGCWC 8 cut(s) 1324, 1635, 3546, 5377, 5716, 5946, 6488, 7333
Alw44I GTGCAC 1 cut(s) 7329
AlwNI CAGNNNCTG 3 cut(s) 1154, 5885, 7136
Ama87I CYCGRG 2 cut(s) 7140, 8948
Aor51HI AGCGCT 2 cut(s) 4149, 6365
ApaLI GTGCAC 1 cut(s) 7329
ArsI GACNNNNNNTTYG 8 cut(s) 528, 560, 3994, 4026, 6743, 6775, 6910, 6942
AseI ATTAAT 1 cut(s) 8820
Asp700I GAANNNNTTC 4 cut(s) 1133, 6532, 6840, 8496
Asp718I GGTACC 1 cut(s) 7368
AspLEI GCGC 9 cut(s) 3008, 3451, 4150, 5455, 6128, 6366, 6876, 8010, 8721
AsuC2I CCSGG 1 cut(s) 5015
AsuII TTCGAA 1 cut(s) 4092
AsuNHI GCTAGC 1 cut(s) 5872
AvaI CYCGRG 2 cut(s) 7140, 8948
AxyI CCTNAGG 1 cut(s) 4043
BaeGI GKGCMC 4 cut(s) 5516, 6345, 7333, 8601
BaeI ACNNNNGTAYC 4 cut(s) 6104, 6137, 8529, 8562
BalI TGGCCA 3 cut(s) 5367, 6737, 7935
BamHI GGATCC 4 cut(s) 1574, 3222, 5202, 8200
BanI GGYRCC 2 cut(s) 5511, 7368
BanII GRGCYC 4 cut(s) 1635, 3546, 5946, 7706
BarI GAAGNNNNNNTAC 8 cut(s) 154, 186, 700, 732, 5994, 6026, 7361, 7393
BauI CACGAG 4 cut(s) 360, 1479, 3511, 3870
BbrPI CACGTG 1 cut(s) 5378
BbsI GAAGAC 5 cut(s) 1781, 2418, 4971, 7287, 7920
Bbv12I GWGCWC 8 cut(s) 1324, 1635, 3546, 5377, 5716, 5946, 6488, 7333
BbvCI CCTCAGC 1 cut(s) 3645
BceAI ACGGC 1 cut(s) 7450
BcgI CGANNNNNNTGC 2 cut(s) 6953, 6987
BciVI GTATCC 4 cut(s) 295, 2108, 6105, 6510
BclI TGATCA 5 cut(s) 2253, 4291, 4956, 7507, 8649
BcnI CCSGG 1 cut(s) 5015
BcuI ACTAGT 2 cut(s) 6563, 7568
BfmI CTRYAG 8 cut(s) 114, 1025, 5349, 5409, 5421, 5973, 8690, 9060
BfoI RGCGCY 3 cut(s) 4151, 6367, 6877
BfuAI ACCTGC 2 cut(s) 4604, 5342
BfuI GTATCC 4 cut(s) 295, 2108, 6105, 6510
BglII AGATCT 2 cut(s) 4343, 5555
BlpI GCTNAGC 2 cut(s) 806, 4259
BmcAI AGTACT 1 cut(s) 1021
BmeRI GACNNNNNGTC 1 cut(s) 2825
BmeT110I CYCGRG 2 cut(s) 7140, 8948
BmgBI CACGTC 1 cut(s) 7112
BmrI ACTGGG 3 cut(s) 2625, 3978, 7225
BmtI GCTAGC 1 cut(s) 5876
BmuI ACTGGG 3 cut(s) 2625, 3978, 7225
BpiI GAAGAC 5 cut(s) 1781, 2418, 4971, 7287, 7920
BplI GAGNNNNNCTC 2 cut(s) 1902, 1934
BpmI CTGGAG 8 cut(s) 1056, 3367, 4202, 5144, 7142, 7171, 7895, 8298
Bpu10I CCTNAGC 3 cut(s) 1751, 3645, 6351
Bpu1102I GCTNAGC 2 cut(s) 806, 4259
Bpu14I TTCGAA 1 cut(s) 4092
BpuEI CTTGAG 5 cut(s) 1904, 2024, 2146, 6572, 7408
BpuMI CCSGG 1 cut(s) 5015
BsaAI YACGTR 1 cut(s) 5378
BsaBI GATNNNNATC 7 cut(s) 1579, 2937, 3066, 4662, 5057, 5919, 8793
BsaHI GRCGYC 2 cut(s) 3111, 8857
BsaI GGTCTC 7 cut(s) 3973, 4356, 6031, 7419, 7871, 8129, 8515
BsaWI WCCGGW 1 cut(s) 7591
BsaXI ACNNNNNCTCC 2 cut(s) 6441, 6471
Bse118I RCCGGY 2 cut(s) 3861, 8906
Bse21I CCTNAGG 1 cut(s) 4043
Bse3DI GCAATG 7 cut(s) 1030, 2077, 2123, 3383, 3497, 5496, 6834
Bse8I GATNNNNATC 7 cut(s) 1579, 2937, 3066, 4662, 5057, 5919, 8793
BseJI GATNNNNATC 7 cut(s) 1579, 2937, 3066, 4662, 5057, 5919, 8793
BseMI GCAATG 7 cut(s) 1030, 2077, 2123, 3383, 3497, 5496, 6834
BseRI GAGGAG 6 cut(s) 2021, 3633, 6095, 6098, 7168, 7258
BseSI GKGCMC 4 cut(s) 5516, 6345, 7333, 8601
BsgI GTGCAG 5 cut(s) 124, 2672, 2757, 3812, 6957
Bsh1236I CGCG 3 cut(s) 1419, 3449, 6126
Bsh1285I CGRYCG 1 cut(s) 8069
BshNI GGYRCC 2 cut(s) 5511, 7368
BsiEI CGRYCG 1 cut(s) 8069
BsiHKAI GWGCWC 8 cut(s) 1324, 1635, 3546, 5377, 5716, 5946, 6488, 7333
BsiHKCI CYCGRG 2 cut(s) 7140, 8948
BsiSI CCGG 5 cut(s) 3862, 5014, 5090, 7592, 8907
BslFI GGGAC 5 cut(s) 1177, 3917, 4473, 5030, 5328
BsmBI CGTCTC 1 cut(s) 7526
BsmFI GGGAC 5 cut(s) 1177, 3917, 4473, 5030, 5328
BsmI GAATGC 4 cut(s) 1500, 2185, 4708, 9020
Bso31I GGTCTC 7 cut(s) 3973, 4356, 6031, 7419, 7871, 8129, 8515
BsoBI CYCGRG 2 cut(s) 7140, 8948
Bsp119I TTCGAA 1 cut(s) 4092
Bsp1407I TGTACA 1 cut(s) 3774
Bsp1720I GCTNAGC 2 cut(s) 806, 4259
Bsp19I CCATGG 3 cut(s) 1626, 6149, 7881
BspACI CCGC 7 cut(s) 1167, 2278, 2372, 3708, 4565, 6507, 6942
BspFNI CGCG 3 cut(s) 1419, 3449, 6126
BspHI TCATGA 3 cut(s) 856, 6076, 6727
BspMAI CTGCAG 6 cut(s) 1029, 5353, 5413, 5425, 5977, 8694
BspMI ACCTGC 2 cut(s) 4604, 5342
BspOI GCTAGC 1 cut(s) 5876
BspQI GCTCTTC 4 cut(s) 160, 2887, 4476, 6049
BspT104I TTCGAA 1 cut(s) 4092
BspT107I GGYRCC 2 cut(s) 5511, 7368
BspTNI GGTCTC 7 cut(s) 3973, 4356, 6031, 7419, 7871, 8129, 8515
BsrBI CCGCTC 1 cut(s) 2372
BsrDI GCAATG 7 cut(s) 1030, 2077, 2123, 3383, 3497, 5496, 6834
BsrFI RCCGGY 2 cut(s) 3861, 8906
BsrGI TGTACA 1 cut(s) 3774
BssAI RCCGGY 2 cut(s) 3861, 8906
BssNI GRCGYC 2 cut(s) 3111, 8857
BssSI CACGAG 4 cut(s) 360, 1479, 3511, 3870
Bst2BI CACGAG 4 cut(s) 360, 1479, 3511, 3870
BstACI GRCGYC 2 cut(s) 3111, 8857
BstAPI GCANNNNNTGC 6 cut(s) 758, 1469, 1664, 3499, 5900, 7136
BstAUI TGTACA 1 cut(s) 3774
BstBAI YACGTR 1 cut(s) 5378
BstBI TTCGAA 1 cut(s) 4092
BstDSI CCRYGG 3 cut(s) 1626, 6149, 7881
BstEII GGTNACC 2 cut(s) 8909, 9001
BstENI CCTNNNNNAGG 2 cut(s) 2006, 4184
BstFNI CGCG 3 cut(s) 1419, 3449, 6126
BstH2I RGCGCY 3 cut(s) 4151, 6367, 6877
BstHHI GCGC 9 cut(s) 3008, 3451, 4150, 5455, 6128, 6366, 6876, 8010, 8721
BstMCI CGRYCG 1 cut(s) 8069
BstNSI RCATGY 6 cut(s) 3166, 3285, 3811, 6121, 7609, 8619
BstPI GGTNACC 2 cut(s) 8909, 9001
BstSFI CTRYAG 8 cut(s) 114, 1025, 5349, 5409, 5421, 5973, 8690, 9060
BstSLI GKGCMC 4 cut(s) 5516, 6345, 7333, 8601
BstUI CGCG 3 cut(s) 1419, 3449, 6126
BstV2I GAAGAC 5 cut(s) 1781, 2418, 4971, 7287, 7920
BstX2I RGATCY 8 cut(s) 1574, 3222, 4343, 5202, 5555, 7309, 8200, 8711
BstXI CCANNNNNNTGG 1 cut(s) 8729
BstYI RGATCY 8 cut(s) 1574, 3222, 4343, 5202, 5555, 7309, 8200, 8711
Bsu36I CCTNAGG 1 cut(s) 4043
BsuI GTATCC 4 cut(s) 295, 2108, 6105, 6510
BtgI CCRYGG 3 cut(s) 1626, 6149, 7881
BtgZI GCGATG 1 cut(s) 1571
BtrI CACGTC 1 cut(s) 7112
BtsI GCAGTG 7 cut(s) 752, 2293, 2660, 4163, 6639, 8159, 8436
BveI ACCTGC 2 cut(s) 4604, 5342
CaiI CAGNNNCTG 3 cut(s) 1154, 5885, 7136
CciI TCATGA 3 cut(s) 856, 6076, 6727
CfoI GCGC 9 cut(s) 3008, 3451, 4150, 5455, 6128, 6366, 6876, 8010, 8721
Cfr10I RCCGGY 2 cut(s) 3861, 8906
CseI GACGC 7 cut(s) 1403, 1678, 2353, 3119, 3396, 5572, 8865
CsiI ACCWGGT 2 cut(s) 3207, 4515
CspCI CAANNNNNGTGG 2 cut(s) 7789, 7824
DraI TTTAAA 4 cut(s) 72, 379, 1041, 3678
DrdI GACNNNNNNGTC 1 cut(s) 8102
DriI GACNNNNNGTC 1 cut(s) 2825
DseDI GACNNNNNNGTC 1 cut(s) 8102
EaeI YGGCCR 3 cut(s) 5365, 6735, 7933
Eam1105I GACNNNNNGTC 1 cut(s) 2825
Ecl136II GAGCTC 3 cut(s) 1633, 3544, 5944
Eco147I AGGCCT 1 cut(s) 971
Eco24I GRGCYC 4 cut(s) 1635, 3546, 5946, 7706
Eco31I GGTCTC 7 cut(s) 3973, 4356, 6031, 7419, 7871, 8129, 8515
Eco32I GATATC 1 cut(s) 5730
Eco47III AGCGCT 2 cut(s) 4149, 6365
Eco53kI GAGCTC 3 cut(s) 1633, 3544, 5944
Eco72I CACGTG 1 cut(s) 5378
Eco81I CCTNAGG 1 cut(s) 4043
Eco88I CYCGRG 2 cut(s) 7140, 8948
Eco91I GGTNACC 2 cut(s) 8909, 9001
EcoICRI GAGCTC 3 cut(s) 1633, 3544, 5944
EcoNI CCTNNNNNAGG 2 cut(s) 2006, 4184
EcoO109I RGGNCCY 3 cut(s) 2228, 2591, 5800
EcoO65I GGTNACC 2 cut(s) 8909, 9001
EcoRI GAATTC 2 cut(s) 330, 8941
EcoRV GATATC 1 cut(s) 5730
EcoT22I ATGCAT 4 cut(s) 1048, 1474, 1616, 3594
EcoT38I GRGCYC 4 cut(s) 1635, 3546, 5946, 7706
Esp3I CGTCTC 1 cut(s) 7526
FalI AAGNNNNNCTT 4 cut(s) 442, 474, 3228, 3260
FaqI GGGAC 5 cut(s) 1177, 3917, 4473, 5030, 5328
FauI CCCGC 2 cut(s) 2271, 2365
FauNDI CATATG 3 cut(s) 2193, 4134, 4212
FbaI TGATCA 5 cut(s) 2253, 4291, 4956, 7507, 8649
FriOI GRGCYC 4 cut(s) 1635, 3546, 5946, 7706
GlaI GCGC 9 cut(s) 3007, 3450, 4149, 5454, 6127, 6365, 6875, 8009, 8720
GsuI CTGGAG 8 cut(s) 1056, 3367, 4202, 5144, 7142, 7171, 7895, 8298
HaeII RGCGCY 3 cut(s) 4151, 6367, 6877
HapII CCGG 5 cut(s) 3862, 5014, 5090, 7592, 8907
HgaI GACGC 7 cut(s) 1403, 1678, 2353, 3119, 3396, 5572, 8865
HhaI GCGC 9 cut(s) 3008, 3451, 4150, 5455, 6128, 6366, 6876, 8010, 8721
Hin1I GRCGYC 2 cut(s) 3111, 8857
Hin6I GCGC 9 cut(s) 3006, 3449, 4148, 5453, 6126, 6364, 6874, 8008, 8719
HinP1I GCGC 9 cut(s) 3006, 3449, 4148, 5453, 6126, 6364, 6874, 8008, 8719
HincII GTYRAC 4 cut(s) 4713, 5755, 7870, 8151
HindII GTYRAC 4 cut(s) 4713, 5755, 7870, 8151
HindIII AAGCTT 6 cut(s) 1870, 2131, 4680, 4727, 8446, 8747
HpaI GTTAAC 1 cut(s) 4713
HpaII CCGG 5 cut(s) 3862, 5014, 5090, 7592, 8907
Hpy99I CGWCG 4 cut(s) 1419, 1694, 3701, 6225
HpyCH4IV ACGT 6 cut(s) 1977, 5024, 5377, 5578, 6223, 7111
HpySE526I ACGT 6 cut(s) 1977, 5024, 5377, 5578, 6223, 7111
Hsp92I GRCGYC 2 cut(s) 3111, 8857
HspAI GCGC 9 cut(s) 3006, 3449, 4148, 5453, 6126, 6364, 6874, 8008, 8719
KpnI GGTACC 1 cut(s) 7372
KroI GCCGGC 1 cut(s) 3861
KroNI GCCGGC 1 cut(s) 3863
Ksp22I TGATCA 5 cut(s) 2253, 4291, 4956, 7507, 8649
KspAI GTTAAC 1 cut(s) 4713
LguI GCTCTTC 4 cut(s) 160, 2887, 4476, 6049
MabI ACCWGGT 2 cut(s) 3207, 4515
MaeII ACGT 6 cut(s) 1977, 5024, 5377, 5578, 6223, 7111
MbiI CCGCTC 1 cut(s) 2372
MfeI CAATTG 4 cut(s) 5226, 7992, 8040, 8338
MflI RGATCY 8 cut(s) 1574, 3222, 4343, 5202, 5555, 7309, 8200, 8711
MlsI TGGCCA 3 cut(s) 5367, 6737, 7935
MluNI TGGCCA 3 cut(s) 5367, 6737, 7935
MmeI TCCRAC 9 cut(s) 387, 1507, 1882, 2121, 3397, 4318, 5611, 5682, 6896
Mox20I TGGCCA 3 cut(s) 5367, 6737, 7935
Mph1103I ATGCAT 4 cut(s) 1048, 1474, 1616, 3594
MroNI GCCGGC 1 cut(s) 3861
MroXI GAANNNNTTC 4 cut(s) 1133, 6532, 6840, 8496
MscI TGGCCA 3 cut(s) 5367, 6737, 7935
MslI CAYNNNNRTG 4 cut(s) 3280, 6255, 8409, 8731
Msp20I TGGCCA 3 cut(s) 5367, 6737, 7935
MspA1I CMGCKG 4 cut(s) 5624, 5656, 6507, 8421
MspI CCGG 5 cut(s) 3862, 5014, 5090, 7592, 8907
MunI CAATTG 4 cut(s) 5226, 7992, 8040, 8338
Mva1269I GAATGC 4 cut(s) 1500, 2185, 4708, 9020
MvnI CGCG 3 cut(s) 1419, 3449, 6126
NaeI GCCGGC 1 cut(s) 3863
NciI CCSGG 1 cut(s) 5015
NcoI CCATGG 3 cut(s) 1626, 6149, 7881
NdeI CATATG 3 cut(s) 2193, 4134, 4212
NgoMIV GCCGGC 1 cut(s) 3861
NheI GCTAGC 1 cut(s) 5872
NmeAIII GCCGAG 2 cut(s) 3180, 5792
NsiI ATGCAT 4 cut(s) 1048, 1474, 1616, 3594
NspI RCATGY 6 cut(s) 3166, 3285, 3811, 6121, 7609, 8619
NspV TTCGAA 1 cut(s) 4092
PaeR7I CTCGAG 2 cut(s) 7140, 8948
PagI TCATGA 3 cut(s) 856, 6076, 6727
PasI CCCWGGG 2 cut(s) 5207, 7692
PceI AGGCCT 1 cut(s) 971
PciI ACATGT 3 cut(s) 3162, 3807, 6117
PciSI GCTCTTC 4 cut(s) 160, 2887, 4476, 6049
PcsI WCGNNNNNNNCGW 1 cut(s) 4006
PctI GAATGC 4 cut(s) 1500, 2185, 4708, 9020
PdiI GCCGGC 1 cut(s) 3863
PdmI GAANNNNTTC 4 cut(s) 1133, 6532, 6840, 8496
PflMI CCANNNNNTGG 1 cut(s) 5363
PfoI TCCNGGA 2 cut(s) 4179, 5198
PmaCI CACGTG 1 cut(s) 5378
PmlI CACGTG 1 cut(s) 5378
Ppu21I YACGTR 1 cut(s) 5378
PpuMI RGGWCCY 2 cut(s) 2591, 5800
PscI ACATGT 3 cut(s) 3162, 3807, 6117
PshBI ATTAAT 1 cut(s) 8820
PsiI TTATAA 3 cut(s) 4947, 5294, 8987
Psp124BI GAGCTC 3 cut(s) 1635, 3546, 5946
Psp5II RGGWCCY 2 cut(s) 2591, 5800
PspCI CACGTG 1 cut(s) 5378
PspEI GGTNACC 2 cut(s) 8909, 9001
PspPPI RGGWCCY 2 cut(s) 2591, 5800
PspXI VCTCGAGB 1 cut(s) 8948
PstI CTGCAG 6 cut(s) 1029, 5353, 5413, 5425, 5977, 8694
PstNI CAGNNNCTG 3 cut(s) 1154, 5885, 7136
PsuI RGATCY 8 cut(s) 1574, 3222, 4343, 5202, 5555, 7309, 8200, 8711
PvuII CAGCTG 3 cut(s) 5624, 5656, 8421
RseI CAYNNNNRTG 4 cut(s) 3280, 6255, 8409, 8731
SacI GAGCTC 3 cut(s) 1635, 3546, 5946
SapI GCTCTTC 4 cut(s) 160, 2887, 4476, 6049
ScaI AGTACT 1 cut(s) 1021
SexAI ACCWGGT 2 cut(s) 3207, 4515
SfcI CTRYAG 8 cut(s) 114, 1025, 5349, 5409, 5421, 5973, 8690, 9060
Sfr274I CTCGAG 2 cut(s) 7140, 8948
SfuI TTCGAA 1 cut(s) 4092
SlaI CTCGAG 2 cut(s) 7140, 8948
SmiI ATTTAAAT 1 cut(s) 72
SmiMI CAYNNNNRTG 4 cut(s) 3280, 6255, 8409, 8731
SmlI CTYRAG 7 cut(s) 1919, 2003, 2161, 6551, 7140, 7423, 8948
SmoI CTYRAG 7 cut(s) 1919, 2003, 2161, 6551, 7140, 7423, 8948
SpeI ACTAGT 2 cut(s) 6563, 7568
SseBI AGGCCT 1 cut(s) 971
SsiI CCGC 7 cut(s) 1167, 2278, 2372, 3708, 4565, 6507, 6942
SspI AATATT 7 cut(s) 664, 2845, 5401, 6868, 6892, 7052, 7837
SstI GAGCTC 3 cut(s) 1635, 3546, 5946
StuI AGGCCT 1 cut(s) 971
SwaI ATTTAAAT 1 cut(s) 72
TaiI ACGT 6 cut(s) 1980, 5027, 5380, 5581, 6226, 7114
TaqII GACCGA 3 cut(s) 2815, 3068, 4338
TatI WGTACW 5 cut(s) 642, 1019, 1935, 3774, 8051
TauI GCSGC 1 cut(s) 3711
TspGWI ACGGA 5 cut(s) 314, 1974, 5073, 7946, 8785
Van91I CCANNNNNTGG 1 cut(s) 5363
VneI GTGCAC 1 cut(s) 7329
VspI ATTAAT 1 cut(s) 8820
XagI CCTNNNNNAGG 2 cut(s) 2006, 4184
XbaI TCTAGA 1 cut(s) 3559
XceI RCATGY 6 cut(s) 3166, 3285, 3811, 6121, 7609, 8619
XcmI CCANNNNNNNNNTGG 3 cut(s) 3205, 5144, 5375
XhoI CTCGAG 2 cut(s) 7140, 8948
XmnI GAANNNNTTC 4 cut(s) 1133, 6532, 6840, 8496
ZrmI AGTACT 1 cut(s) 1021
Zsp2I ATGCAT 4 cut(s) 1048, 1474, 1616, 3594
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.