Rh7BG416100

BEACH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0002031
Physical Location & Seq
Reverse (-)
46924248 .. 46958760
34513 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG416100.1

Sequence Viewer

Length: 9156 bp
ATGAATATCGTCAAGGGTGTTGCTGACCTTATTCGAAGGACATCCGGTGGCCACGATGGAGATTCTTTCTCAGGGTCGCACTCCCAGAGGTTCTCTGCCCCTGGTTTGAGGATCCGCTTCAGTGAAGTTGGAGATGAGGCGGTTCTAAATATACTTTGGGCTAGATATCAAAAAGCTGTCGATAAGGTGGAAAAGAGGAGGCTGCTTCATGTTTTTCTCAAGCAGTTCCTAGTTGTATACAAGAACTGGGAACCAGTAAATTCTGACCAAAATTCAGAGGCTGCTTCGACTACCATCCAACATGCAGAGTCTGATGATGTAGTTATTGGTTGCTTTGCTGGACATCCTGCAGAAGTCATCTTAGTATTGACTGAAGAGATTACACAATTAACTGCTATGGTTGTTGAATTAAATAGCAGTACAGTCCGATCAGCAGACTTCTGTGGCCATTCCACAATCTTAAATATCATTTCTGAAGGGATTCCACTCCTTGATGCTCTTCTGATTGTTACTCGTTCGCTGCAAAATTGCAGAGTTTTGGGATACTATGGTGGCATTCCAAAGCTAACGGCATTAATGAAAGGGGTTGTTGTCCAACTTAAAACAATAAGTTGCGCACTTTCAGCTGACGAAAAATTATCTAATTTTACCCTGGAGAAGACAGGACTCCTGCAACAAATACTTGTATATGTGGTGTCAATAATAAGTACTTTTATTGATTTGAATTCAAATGTAAATGAGAAATGTCAGTTGTATAGTAATACCATAGGCTTTGTCTCGGGGGGTGGTGCATCTCCGGTCGACTCTTCTAGTAGTTCAAATGCTCCTCCTAGTGAAATATTGTTACGTTGGCATCAGAGGGCAGTTGTGTCTGTGATGGAAGCTGGTGGACTTAATTGGTTAGTAGAGCTGCTGCGTGTGATCCGAAGGTTAAGCATGAAAGAACAGTGGACAGATACATCACTTCTGTATTTGTCTTTGAGAATTCTTCATTCAACATTATCTCAGAACCCTCGTGGTCAAAATCATTTTAAAAGTATTGGAGGACTTGAAGTTCTATTGGATGGTCTTGGAATACCATCAAATAATGGGCTAATATTGAAAAACTCTGCTTGTGCTGCTGACAAGAGATCTGAGAATCCCTTGTTAAAAATCTTCCAGCTGCATGTTCTCTCCTTGGAAGTTCTCAAAGAGGCTGTCTTTGGGAATTTCAGCAACTTGACATTTCTATGTGAAAATGGAAGGGTTCAGAAATTCGCAAATAGCTTTTGTTCCCCTGCTTTCACGTTTCACGAGTATAAACAACACACCAAGGGATTGTCTGGTCAGCAAGGTTCTCAAATGCCTGAAGTTGACTTTGGAACTGGCAATACTGTGAATAGCCGCATTGCAGAGGTTTCTGTTGCTCTTCCTGCCGATGGTTCTTACTCTCAAGTTTGGAATGATTATGTTCTTAAGTTGAGCGGAGTATTTTGTTCTTTCCTTCCCTCTTCAGAAGATATAAAATCTCATGATGTTGAACTGTCCACTGGTCGAATTACTGTGCCATTTTCTTCATCGTATGGTGAACTTTCAGTTGCATGGATCATGAGGGTTCTTCAAACAGTGTTCCCCTGCATTAAGGCCTGCTCAGATCAAAATGATTTAACAAGCCACTTAAGGGTCTTTGTCACTGCGCTGCAGCACTCTGTATTAAATGCATTTAGGATGGTTCTTGATGCATCCCCTGTTTCACTCAAAGTATTTCGAAATGAGGGAATCTGGGAGCTTATATTTTCTGAGAATTTTTTCTATTTTGGACCAGCTCCTGATGATCTTTCTGGAGAGTGCTGTACATGTATTGAGTTCCTGAGGAAAAATGAAATGCTTTCTTCTTCTAGTGACATCATCAGTCAAGCAAGAGTTTGTGGGATTGAAGTTCTCCAAATGGATGTGATTTCATTTTTGGAGTTTGCTGCAACTTCTAATGGGAACCCAGACAATTCGCCTGAATTATCTGCTCTCGTAGAAGCCCTTGAACAGTGTGCTTGCAATCCTGAAGTTTCTAGTGCACTTGCCAAGTGTTTGCTTCGCATATTAAAGCTTTCAGCTGAGAAAACTATTGCTTCGTTTAAAGCAGTTAATTCATTTCCTCGTGTGCTTAAGGTTGTTTGCATTCAATCCCAAGAGTCAAGAAGGTCTAGCAATATAATCCTTTCTGTTGAGAGTAATGTCGGTGAAGTGGTTCCATGTCAGCAGAAGAGATCTAAGTCACATGAGACAACGCAGAGATGGATCAAATGCATGGAAACATCCATGGAGCTTTATATGGAGTTTTTCTCTACAATAGAAGATGCTGGAAGTTTGGTTTTGCATAGCTCTGAATGTATTGGTCGGTTGTTTGATTTATTCTGGATAGAAGGTTTAAGAAATAAAGTGCTAAGGCATATTCTTGATCTCATGAAGATTGTACCATCATCTGAAGAAGATCAAAGAGCAAAGTTGCAGTTATGTTCTAAATACGTGGAAACATTCACTCAAATAAAGGACCGGGAAAGAAACTTTGTTGAGCTATCTATCAATTTACTAGCCGGAATGCGAGATATGCTCCAGATTGATCCTGTGTCCTATCAGACTTTGTTTCGTGAGGGAGAGTGCTTTTTGCACATTGTCTCTTTACTAAATGGTAACCTTGATGATGCTAATGGAGAGACTTTGGTTCTGGGTGTCCTTCAAACTCTTACCTGTTTGCTTGCAAGCAATGACACATCAAAGGCCACATTTAGAGGTCTTGCGGGCAAGGGGTACCAGACATTGCAAAGTCTATTGTTGGAGTTTTGCCAGTCTCGCTCAAGTGAAGGACTTTTGAATGCGCTGCTTGATATGCTTGTTGATGGAAAGTTTGATATGAAAGCAAGTCCTAAAATAAAGAATGAAGACGTGATCATACTTTATCTCAGCGTCCTGCAGAAGAGCAGTGACTCGTTGCAGCATAGCGGGCTTGATGTGTTTCAGCAATTAATGAGAGATTCCATTTCCAATCGAGCTTCTTGTGTCAGAGCAGGAATGCTCGATTTTCTACTTGATTGGTTTTCACAAGAAGGTAATGATAGTGTCATCTTGAAAATTGCCCAATTAATTCAAGTTGTTGGTGGGCATAGCACATCTGGGAAGGACATTCGCAAAATCTTTGCCCTCCTTCGAAGTGAGAAAATTGGAAATCAGCACAAGTATTGCTCACTGTTGTTGTCCAGTGTTTTGTCAATGCTAAAGGAAAAGGGACCTACTGCCTTTTTTGACCTCAATGGGAATGATTCTGGGATCATGATTAAAACACCTGTTCAGTGGCCACTCAACAAGGGATTTTCTTTTTCATGTTGGTTGAGGGTAGAGAATTTCCCCAGAAGTGGGACAATGGGTCTTTTCAGTTTCCGTACAGAAAATGGAAGAGGGTGCATGGCGGCACTAGCGAAGGACAAGCTTCTGTATGAGTCCATCAATCTGAAGCGACACTCTGTCCAGCTACAGCTAAAAATTGTCACAAAGAAATGGCATTTGCTATGTATAACTCATAGCATAGGAAGAGCTTTTTCAGGGGGTAGCTTATTGAGGTGTTACGTTGATGGTGATCTTGTTTCTTCTGAAAGATGCAGTTATGCGAAAGTTAATGACTTGCTAACAAGTTGTACAGTTGGCGCCAAATTTGACGGGCCCCTGTCTGATGATGATTTATCTTCGAAATCCATAAGGGATTCGCATCCTTTTCTTGGTCAGGTTGGTCCTGTTTATCTGTTCAATGATGCCATTTCTTCTGAGCAAGTTCAGGGTATCTGTTCTCTTGGACCAAGCTACATGTATTCGTTCCTTGACAATGAAGCTTCATCATCTAATGAAACTAAGCTCGGAGGGGTTCTTGATGTCAAAGATGGTCTTGCATCAAAAATTATTTTTGGACTTAATGCTCAGGCAAGTAATGGCAGGACACTATTTAATGTTTCACCAATGCTAGATCATGCATCAGATAGGAACTCATTTGAAGCAACCATGATGGTTGGCACACAGCAATGCTCCAGACGCCTACTGCAACAGATAATTTACTGTGTGGGAGGGGTATCAGTTTTCTTCCCTCTTATTGCCCAGTCTGAAAAATATGAAAATGAAGAAAGTGGGCAATTTAAAGATACGTTTCCTATACCTATTACAAGAGATCGGGTGACTGCTGAAGTCATTGAGCTAATCGCTTCTGTGCTTGATGAGAATGTAGCTAATCAACAACAGATGCATCTTCTCTCTGGGTTCTCAATACTGGGATTCTTGTTGCAGTCAGTTCCTCCTCAGCAACTTAATTTGGAAACACTTTCATCTCTAAAACATCTCTATCATATCGTTGCAAACTGTGGCTTGGCTGAACTGCTTACCAAAGAGGCTATATCTAGCATATTTCTTAACCCTCTCATCTGGCTGTACACGGATTATAAGGTGCAGCGAGAATTATACATGTTTGTCATCTGGCAGTTTGATAATGATCCAAGGATGCTTAAAAGCCTTTGCCGGCTCCCCCGTGTTATTGATATAATACGCCAATTCTATTGGGATAATCCAAAATCTCGATTTGCTATTGGAAACATGCCTCTCATTCATCCCATCACAAAACAAGTTCTTGGAGAGAGACCTAGTAATGACGAAATACATAAAATTCGTCTTCTTTTGTTGAGCCTTGGTGAATTGAGCCTTAGGCAGAACATTGCAGGGGCAGATATAAGAGCTCTAATAGCTTTCTTTGAGACAAGTCAGGATATGACCTGCATTGAAGATGTTCTACATATGGTTATTCGAGCGATTTCTCAAAAGCCACTGCTTGCAGATTTCCTTGAACAGGTCAATTTGATTGGTGGCTGTCACATATTTGCCAATCTTCTTCAGAGAGAACATGAACCTATCAGATTACTTAGCTTGCAGCTCCTTGGAAGGCTTTTAGTTGATCTCCCATCTGAGAAAAAGGGAGCAAGATTTTTCAATCTTGCAGTCGGAAGGTCCCGATCTCTTTTTGACGGCCATAAAAAAATCTCAAAGCAACCAATTTTTTCAGCCATGTCTGATAGATTATTTAGGTTTCCACAAACAGATAACTTGTGTGCCACTTTGTTTGATGTTCTTCTTGGTGGTGCTAGCCCTAAACAGGTATTACAGAAGCACAACCAGGCTGAGAAGCAGAGAAGCAAAGGACATATGTCACATTTTCTCCTTCCTCAAATTTTGGTTCTTATATTTAGATTCCTGTCTGGCTGTGAGGATGCGGCTTCAAGAATGAAAATTATCAGAGATTTACTTTATCTTCTTGATTCGGATCCTTCAAATGTCGAAGCTTTTATGGATTTTGGATGGAATGCCTGGTTAACAGCTTGTGTGAAGCTTGGTGTGTTCAAAGACTACAAAGTTACTCCAGAAGATCAAGATCACGATGAGAAAACAGAACAAGATTTAGTGAGGAATATATTTTGTGTTGTTCTTTGTTACTATGTTCATTCTGTGAAAGGTGGGTGGCACCAGTTAGAAGAGACGGTAACTTTCCTGCTAATGCAGTGTGAACATGGTGGAGTTTCTTTTCGGTACTTGCTTCGTGACATATATAAGGATCTGATCAGGGGATTGTTAGAATTGTCTTCTGAAGAGAGTATTTTTGTGTCGCAACCGAGCCGGGACAACACATTATACCTTCTAAGACTGATCGATGAGATGCTCATTTCTGAAATGGACCAAAACCTTCCGTTCCCAGCAAGCACTACAGATTTCTCTCTTGATTCGTTAGAGTTAGAATGCCATAAAGATTATGGTTCTGCCTTGTTTGAAGTGCTGCATGGAGAAAATGACAGCCAAATATCGAGGACTTCTGGGAGTTGCAAGCAGCCTGTCAAAAGTGAAGATGGCATTGTCAATGACAAGTGGTGGGATCTGTATGACAGTTTGTGGATTATTATTAGTGAGATGAATGGTAAGGGACCGAGCAAGTCGTTATCGAAATCATCACCAACTGCAGTTCCATCTTTTGGTCAGAGAGCACGTGGCTTAGTAGAATCGTTGAACATTCCTGCTGCAGAGGTGGCTGCAGTTGTTGTATCAGGAGGGATAGGCAGTGCATTAGGTGGCAAACCAAACAAAAATGTCGATAAGGCAATGCTCTTACGAGGAGAGAGGTGTCCAAGAATTATTTTTCGACTTGTAATCCTATATCTCTGTAGATCTTCTTTAGAAAGAGCATCGCGATGCGTCCAACTGGTCATTCCACTTCTGCCATTTCTCTTATCAGCTGATGACGAGCAAAGTAAAAGCAGATTGCAGCTGTTCATCTGGGCATTGCTTGTTGTTAGGTCGCAGTTTGGAATGCTAGATGACGGTGCTCGTTTTCATGTTATATCACACTTGATTCGAGAAACTATCAGCTTTGGTAAATCAATGCTTGCTAGTAGCATTATGGGTAGGGAGGATTCCTTGGATTCAGGCAGCAATGTAAAAGAAACCGGATCCATTCACAATCTGATTCAGCGAGATCGAGTACTTGCAGCAGTTGCAGAGGAGTCAAAATATATAAAGTCATTAGATGCTGATCGCCAAAGGCAGCTGCATGAACTCCACTCCAGGATGGATGAAAATGCCTCTGCAGAATCAAATGATAGAAAGGCTTTTGAAGATGAGATACAAAGTAGCTTAACCTCCATTCTTGCTTTGGATGACAGCAGAAGAGCTGCATTCCAGCTAACTCACGAGGAGGAGCAGCAAAATGTTGCTGAGAAATGGATACACATGTTTCGTGCTTTGATTGATGAGAGAGGTCCATGGTCTGCTAACCCTTTTCCAAATAGTGCTGTAAGGCATTGGAAACTTGAGAAGATAGAAGATACCTGGCGACGGAGACCAAAACTGAGACAGAATTATCATTTTGATGAAAACTTGTGCCAACCTTCATCCTCTGTCTCCAGCATTGAGATTACACCTCCTTTTAATGAAAGTAAATCTGCTTTTGTTGGCCACATTCCTGAGCAAATGAAGCGGTTTTTGCTAAAAGGAGTATGGAAGATTACTGATGAGGGGAGCTCAGAACCCAATGAAACTGATACCGAGCTCAGTGGACAGAAGCCGTCCATCCACACGGATACCTCAGACAGCCAGACCTCAGAATTAGCAAAGGACACCAGTGATTGGATACAGGAGAGGAAAGATTCGTCTTCCCCTTCACATGAGACAGAAACTAGTGAGGTTCTTACATCAGTTCCTTGTGTACTTGTATCCCCAAAAAGAAAATTAGCTGGACATTTGGCGGTCATGAAAAACGTCTTGCATTTCTTTGGAGAATTTTTGGTTGAAGGTACTGGAGGATCATCCATTTTCAGAAACTTCCCTGCTTCAAGCAATTTTGATTTGACCAAACCTGATCAAAAGCAGAAATTTATAAAACAACCAATATGCTTTGGTTTGGATGCATCGAAGGGCACCATGGTTCAGAAATTTGAGGCAATAGGTGAAAATGTTCTCAAAAGAAAGGAGCTAAAAAATATTAAACGCCACAGGAGGTGGAACATGGGCAAGATCAAATCTGTTTGTTGGACGCGTTATTTGCTTCGGTATACTGCAATAGAGATTTTCTTCTGCGATTCATCTGCACCGATATTTTTGAATTTTGCATCACAAAAGGATGCAAAAGATATTGGAACCTTAATAGTTGCTACCAGGAACGAATATTTGTTTCCAAAAGGAAGTGGTAGGGATAAAAGTGGAGCTATTTCATTTGTTGATAGACGTGTATCCTTGGAAATGGCAGAAGCTGCCCGAGAGAGCTGGAGGAGAAGGGATATGACAAATTTTGAATATCTAATGATCCTTAATACGCTGGCTGGAAGGTCTTATAATGATTTGACACAATATCCTGTGTTTCCTTGGGTCTTGGCTGATTATTCCTCGGAGGTTCTTGATTTCAACAAGTCTTCAACCTTTCGGGATCTTTCAAAACCAGTTGGAGCACTTGATTTAAAACGATTTGAGGTGTTTGAAGATAGATATCGTAGCTTTACTGATCCTGATATACCTAGTTTCTACTATGGGTCTCATTATTCAAGCATGGGGATAGTGCTTTATTACCTTCTCAGATTAGAGCCATTTACTTCTCTCCATCGCAATTTGCAGGGTGGTAAATTTGACCATGCAGATCGTCTCTTTCAAAGCATTGAGTCAACTTATCAGAACTGCCTTTCTAATACAAGTGATGTGAAGGAGTTAATACCTGAGTTCTTTTATATGCCAGAGTTTCTTGTGAATTCAAACTCCTATCATTTAGGGGTGAAACAAGATGGTGAACCTATTGGAGATGTTTGTCTCCCTCCCTGGGCCAAGGGCTCACCTGAAGAATTTGTTAACAAGAACAGAGAGGCCCTTGAAAGTGAATATGTTAGCTCCAATCTACACCATTGGATAGATTTAGTATTTGGTTACAAACAGCGTGGAAAACCTGCTGTGGAGGCAGCAAATATTTTTTATTACTTGACCTATGAAGGCGCTGTTGATTTGGACACCATGGAAGACGATTTACAAAGATCAGCAATTGAAGACCAAATTGCAAATTTTGGACAAACACCAATTCAGATTTTCCGTAAAAAACACCCAAGAAGAGGACCACCCATTCCAATTGCTCATCCTCTGCGCTTTGCACCTAGTTCTATTAACATGACTTCCATTGTTAGTAGTGCAAGTCAACCAAGGTCGTCTTCATTGTATATTCGTACAGTGGACTCAAATATTGTTGTTGTAAACCAGGGGCTCACCTTGTCAGTTAAGATGTGGTTGACATCCTCACTGCAATCTGGTGGAAATTTTACCTTCTCTGGCTCCCAGGATCATTCTTTTGGCATTGGTTCTGATGTCCTTTCTCCGCGTAAAATTGGGAGTCCTTCTGCTGAAAATGTTGAACTTGGACCACAATGCTTCGCAACAATGCAAACAGCATCGGAGAATTTTTTGATCTCATGTGGCAATTGGGAAAATAGCTTTCAGGTTATATCCTTGAATGATGGCAGAGTGGTGCAAAGCATCAGGCAGCATAGGGATGTGGTCAGTTGTGTTGCAGGTATTTTTCGTAATTGGAAGACAAATATATTTACTGTTACAAGAGCATGCTTATGTAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Beach DUF4704 DUF4800 Laminin_G_3 PH_BEACH WD40

Protein Analysis

3051

Amino Acids

341.95

Weight (kDa)

6.23

Isoelectric Point (pI)

47.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Neurobeachin PF20425 661 - 1083 1.2e-213 Neurobeachin alpha solenoid region
Laminin_G_3 PF13385 1095 - 1268 1.2e-08 Concanavalin A-like lectin/glucanases superfamily
DUF4704 PF15787 1334 - 1852 8.3e-161 Neurobeachin/BDCP, DUF4704 alpha solenoid region
DUF4800 PF16057 2202 - 2308 4.8e-07 Domain of unknown function (DUF4800)
PH_BEACH PF14844 2504 - 2563 1.7e-10 PH domain associated with Beige/BEACH
Beach PF02138 2604 - 2880 4.9e-124 Beige/BEACH domain
NBCH_WD40 PF20426 2901 - 3031 7.1e-65 Neurobeachin beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 4455, 7427, 7881
Acc16I TGCGCA 1 cut(s) 616
Acc36I ACCTGC 3 cut(s) 4790, 8488, 9083
Acc65I GGTACC 1 cut(s) 2784
AccB1I GGYRCC 4 cut(s) 2784, 3674, 5523, 7466
AccB7I CCANNNNNTGG 2 cut(s) 6026, 7176
AccBSI CCGCTC 1 cut(s) 1464
AccI GTMKAC 3 cut(s) 237, 801, 7601
AccII CGCG 3 cut(s) 6241, 7585, 8902
AcoI YGGCCR 5 cut(s) 49, 445, 3326, 5032, 7003
AcvI CACGTG 1 cut(s) 6041
AcyI GRCGYC 2 cut(s) 3675, 4054
AflII CTTAAG 3 cut(s) 1454, 1657, 2141
AflIII ACRYGT 6 cut(s) 1835, 3831, 4476, 6780, 7583, 7774
AhdI GACNNNNNGTC 2 cut(s) 3396, 3494
AhlI ACTAGT 1 cut(s) 7226
AjiI CACGTC 2 cut(s) 2920, 7775
AjuI GAANNNNNNNTTGG 6 cut(s) 1341, 1373, 6243, 6275, 8719, 8751
AloI GAACNNNNNNTCC 2 cut(s) 1038, 1070
Alw21I GWGCWC 7 cut(s) 2053, 4747, 6040, 6379, 7073, 7101, 7996
Alw44I GTGCAC 1 cut(s) 2049
AlwNI CAGNNNCTG 4 cut(s) 281, 311, 1808, 7799
Ama87I CYCGRG 2 cut(s) 778, 7803
ApaI GGGCCC 1 cut(s) 3693
ApaLI GTGCAC 1 cut(s) 2049
ArsI GACNNNNNNTTYG 4 cut(s) 1182, 1214, 7573, 7605
AseI ATTAAT 3 cut(s) 575, 2999, 3116
Asp700I GAANNNNTTC 5 cut(s) 480, 1787, 2223, 4794, 7503
Asp718I GGTACC 1 cut(s) 2784
AspLEI GCGC 6 cut(s) 617, 1678, 2854, 3677, 8528, 8673
AsuC2I CCSGG 2 cut(s) 2531, 5678
AsuII TTCGAA 4 cut(s) 34, 1747, 3181, 3716
AsuNHI GCTAGC 1 cut(s) 5147
AvaI CYCGRG 2 cut(s) 778, 7803
AxyI CCTNAGG 2 cut(s) 1850, 4712
BaeGI GKGCMC 3 cut(s) 2053, 3693, 7469
BaeI ACNNNNGTAYC 4 cut(s) 535, 568, 6767, 6800
BalI TGGCCA 4 cut(s) 51, 447, 3328, 7005
BamHI GGATCC 3 cut(s) 111, 5326, 6500
BanI GGYRCC 4 cut(s) 2784, 3674, 5523, 7466
BanII GRGCYC 6 cut(s) 3693, 4747, 7073, 7101, 8369, 8790
BarI GAAGNNNNNNTAC 6 cut(s) 4782, 4814, 6657, 6689, 8541, 8573
BauI CACGAG 4 cut(s) 1014, 1292, 2133, 6740
BbrPI CACGTG 1 cut(s) 6041
Bbv12I GWGCWC 7 cut(s) 2053, 4747, 6040, 6379, 7073, 7101, 7996
BbvCI CCTCAGC 1 cut(s) 4314
BceAI ACGGC 3 cut(s) 585, 5047, 7099
BcgI CGANNNNNNTGC 2 cut(s) 7616, 7650
BciVI GTATCC 6 cut(s) 536, 6768, 7123, 7173, 7273, 7789
BclI TGATCA 3 cut(s) 2922, 5619, 7408
BcnI CCSGG 2 cut(s) 2531, 5678
BcuI ACTAGT 1 cut(s) 7226
BfoI RGCGCY 2 cut(s) 3678, 8529
BfrI CTTAAG 3 cut(s) 1454, 1657, 2141
BfuAI ACCTGC 3 cut(s) 4790, 8488, 9083
BfuI GTATCC 6 cut(s) 536, 6768, 7123, 7173, 7273, 7789
BglII AGATCT 3 cut(s) 1130, 2243, 6218
BmcAI AGTACT 2 cut(s) 709, 6534
BmeRI GACNNNNNGTC 2 cut(s) 3396, 3494
BmeT110I CYCGRG 2 cut(s) 778, 7803
BmgBI CACGTC 2 cut(s) 2920, 7775
BmrI ACTGGG 3 cut(s) 256, 4111, 4295
BmtI GCTAGC 1 cut(s) 5151
BmuI ACTGGG 3 cut(s) 256, 4111, 4295
BoxI GACNNNNGTC 1 cut(s) 5209
BplI GAGNNNNNCTC 6 cut(s) 2303, 2335, 2571, 2603, 7055, 7087
BpmI CTGGAG 9 cut(s) 674, 1842, 2573, 4033, 5406, 6598, 6937, 7368, 7834
Bpu10I CCTNAGC 4 cut(s) 2420, 3942, 4314, 7014
Bpu14I TTCGAA 4 cut(s) 34, 1747, 3181, 3716
BpuEI CTTGAG 4 cut(s) 203, 1416, 2815, 6881
BpuMI CCSGG 2 cut(s) 2531, 5678
Bsa29I ATCGAT 1 cut(s) 5709
BsaAI YACGTR 2 cut(s) 2503, 6041
BsaBI GATNNNNATC 7 cut(s) 3606, 3735, 4503, 5325, 5433, 6582, 8031
BsaHI GRCGYC 2 cut(s) 3675, 4054
BsaI GGTCTC 3 cut(s) 4642, 6883, 8082
BsaWI WCCGGW 3 cut(s) 44, 796, 6497
BsaXI ACNNNNNCTCC 2 cut(s) 5205, 5235
Bse118I RCCGGY 1 cut(s) 4530
Bse21I CCTNAGG 2 cut(s) 1850, 4712
Bse3DI GCAATG 8 cut(s) 1386, 2746, 2792, 4049, 4722, 6159, 6332, 6490
Bse8I GATNNNNATC 7 cut(s) 3606, 3735, 4503, 5325, 5433, 6582, 8031
BseCI ATCGAT 1 cut(s) 5709
BseJI GATNNNNATC 7 cut(s) 3606, 3735, 4503, 5325, 5433, 6582, 8031
BseMI GCAATG 8 cut(s) 1386, 2746, 2792, 4049, 4722, 6159, 6332, 6490
BseRI GAGGAG 8 cut(s) 211, 816, 4302, 6180, 6566, 6758, 6761, 7831
BseSI GKGCMC 3 cut(s) 2053, 3693, 7469
BseYI CCCAGC 1 cut(s) 5752
BsgI GTGCAG 2 cut(s) 4481, 7620
Bsh1236I CGCG 3 cut(s) 6241, 7585, 8902
Bsh1285I CGRYCG 1 cut(s) 801
BshNI GGYRCC 4 cut(s) 2784, 3674, 5523, 7466
BshVI ATCGAT 1 cut(s) 5709
BsiEI CGRYCG 1 cut(s) 801
BsiHKAI GWGCWC 7 cut(s) 2053, 4747, 6040, 6379, 7073, 7101, 7996
BsiHKCI CYCGRG 2 cut(s) 778, 7803
BsiSI CCGG 7 cut(s) 45, 797, 2530, 2571, 4531, 5677, 6498
BslFI GGGAC 5 cut(s) 3273, 3403, 4999, 5693, 5991
BsmBI CGTCTC 2 cut(s) 5531, 8189
BsmFI GGGAC 5 cut(s) 3273, 3403, 4999, 5693, 5991
BsmI GAATGC 9 cut(s) 555, 2154, 2580, 2854, 3051, 5371, 5801, 6366, 6725
Bso31I GGTCTC 3 cut(s) 4642, 6883, 8082
BsoBI CYCGRG 2 cut(s) 778, 7803
Bsp119I TTCGAA 4 cut(s) 34, 1747, 3181, 3716
Bsp120I GGGCCC 1 cut(s) 3689
Bsp1407I TGTACA 3 cut(s) 1832, 3665, 4443
Bsp19I CCATGG 4 cut(s) 2295, 6812, 7470, 8544
Bsp68I TCGCGA 1 cut(s) 6241
BspDI ATCGAT 1 cut(s) 5709
BspFNI CGCG 3 cut(s) 6241, 7585, 8902
BspHI TCATGA 5 cut(s) 1510, 1587, 2439, 3303, 7299
BspMAI CTGCAG 7 cut(s) 352, 1683, 2949, 6016, 6076, 6088, 6640
BspMI ACCTGC 3 cut(s) 4790, 8488, 9083
BspOI GCTAGC 1 cut(s) 5151
BspQI GCTCTTC 5 cut(s) 504, 1413, 2945, 3556, 6712
BspT104I TTCGAA 4 cut(s) 34, 1747, 3181, 3716
BspT107I GGYRCC 4 cut(s) 2784, 3674, 5523, 7466
BspTI CTTAAG 3 cut(s) 1454, 1657, 2141
BspTNI GGTCTC 3 cut(s) 4642, 6883, 8082
BsrBI CCGCTC 1 cut(s) 1464
BsrDI GCAATG 8 cut(s) 1386, 2746, 2792, 4049, 4722, 6159, 6332, 6490
BsrFI RCCGGY 1 cut(s) 4530
BsrGI TGTACA 3 cut(s) 1832, 3665, 4443
BssAI RCCGGY 1 cut(s) 4530
BssNAI GTATAC 2 cut(s) 238, 7602
BssNI GRCGYC 2 cut(s) 3675, 4054
BssSI CACGAG 4 cut(s) 1014, 1292, 2133, 6740
Bst1107I GTATAC 2 cut(s) 238, 7602
Bst2BI CACGAG 4 cut(s) 1014, 1292, 2133, 6740
BstACI GRCGYC 2 cut(s) 3675, 4054
BstAFI CTTAAG 3 cut(s) 1454, 1657, 2141
BstAPI GCANNNNNTGC 2 cut(s) 6545, 7799
BstAUI TGTACA 3 cut(s) 1832, 3665, 4443
BstBAI YACGTR 2 cut(s) 2503, 6041
BstBI TTCGAA 4 cut(s) 34, 1747, 3181, 3716
BstDSI CCRYGG 4 cut(s) 2295, 6812, 7470, 8544
BstEII GGTNACC 1 cut(s) 2666
BstENI CCTNNNNNAGG 1 cut(s) 4853
BstFNI CGCG 3 cut(s) 6241, 7585, 8902
BstH2I RGCGCY 2 cut(s) 3678, 8529
BstHHI GCGC 6 cut(s) 617, 1678, 2854, 3677, 8528, 8673
BstMCI CGRYCG 1 cut(s) 801
BstNSI RCATGY 8 cut(s) 305, 1169, 1839, 3835, 4480, 4609, 6784, 9144
BstPAI GACNNNNGTC 1 cut(s) 5209
BstPI GGTNACC 1 cut(s) 2666
BstSLI GKGCMC 3 cut(s) 2053, 3693, 7469
BstUI CGCG 3 cut(s) 6241, 7585, 8902
BstX2I RGATCY 9 cut(s) 111, 1130, 2243, 5326, 5614, 5929, 6218, 6500, 7972
BstYI RGATCY 9 cut(s) 111, 1130, 2243, 5326, 5614, 5929, 6218, 6500, 7972
BstZ17I GTATAC 2 cut(s) 238, 7602
Bsu15I ATCGAT 1 cut(s) 5709
Bsu36I CCTNAGG 2 cut(s) 1850, 4712
BsuI GTATCC 6 cut(s) 536, 6768, 7123, 7173, 7273, 7789
BsuTUI ATCGAT 1 cut(s) 5709
BtgI CCRYGG 4 cut(s) 2295, 6812, 7470, 8544
BtgZI GCGATG 3 cut(s) 6222, 6256, 8129
BtrI CACGTC 2 cut(s) 2920, 7775
BtsI GCAGTG 6 cut(s) 1671, 2962, 4832, 5567, 6118, 8822
BtuMI TCGCGA 1 cut(s) 6241
BveI ACCTGC 3 cut(s) 4790, 8488, 9083
CaiI CAGNNNCTG 4 cut(s) 281, 311, 1808, 7799
CciI TCATGA 5 cut(s) 1510, 1587, 2439, 3303, 7299
CfoI GCGC 6 cut(s) 617, 1678, 2854, 3677, 8528, 8673
Cfr10I RCCGGY 1 cut(s) 4530
ClaI ATCGAT 1 cut(s) 5709
CseI GACGC 4 cut(s) 2929, 4062, 6235, 7591
CspCI CAANNNNNGTGG 4 cut(s) 5107, 5142, 8452, 8487
DinI GGCGCC 1 cut(s) 3676
DraI TTTAAA 4 cut(s) 1033, 2113, 4156, 8004
DriI GACNNNNNGTC 2 cut(s) 3396, 3494
EaeI YGGCCR 5 cut(s) 49, 445, 3326, 5032, 7003
Eam1105I GACNNNNNGTC 2 cut(s) 3396, 3494
Ecl136II GAGCTC 3 cut(s) 4745, 7071, 7099
Eco147I AGGCCT 1 cut(s) 1625
Eco24I GRGCYC 6 cut(s) 3693, 4747, 7073, 7101, 8369, 8790
Eco31I GGTCTC 3 cut(s) 4642, 6883, 8082
Eco32I GATATC 2 cut(s) 167, 8033
Eco53kI GAGCTC 3 cut(s) 4745, 7071, 7099
Eco72I CACGTG 1 cut(s) 6041
Eco81I CCTNAGG 2 cut(s) 1850, 4712
Eco88I CYCGRG 2 cut(s) 778, 7803
Eco91I GGTNACC 1 cut(s) 2666
EcoICRI GAGCTC 3 cut(s) 4745, 7071, 7099
EcoNI CCTNNNNNAGG 1 cut(s) 4853
EcoO109I RGGNCCY 4 cut(s) 3260, 3690, 5013, 8401
EcoO65I GGTNACC 1 cut(s) 2666
EcoRI GAATTC 3 cut(s) 724, 984, 8287
EcoRV GATATC 2 cut(s) 167, 8033
EcoT22I ATGCAT 6 cut(s) 1702, 1723, 2285, 3997, 4263, 7459
EcoT38I GRGCYC 6 cut(s) 3693, 4747, 7073, 7101, 8369, 8790
EgeI GGCGCC 1 cut(s) 3676
EheI GGCGCC 1 cut(s) 3676
Esp3I CGTCTC 2 cut(s) 5531, 8189
FalI AAGNNNNNCTT 4 cut(s) 3894, 3926, 8719, 8751
FaqI GGGAC 5 cut(s) 3273, 3403, 4999, 5693, 5991
FauI CCCGC 2 cut(s) 2767, 2969
FauNDI CATATG 2 cut(s) 4803, 5208
FbaI TGATCA 3 cut(s) 2922, 5619, 7408
FblI GTMKAC 3 cut(s) 237, 801, 7601
FriOI GRGCYC 6 cut(s) 3693, 4747, 7073, 7101, 8369, 8790
FspI TGCGCA 1 cut(s) 616
GlaI GCGC 6 cut(s) 616, 1677, 2853, 3676, 8527, 8672
GsaI CCCAGC 1 cut(s) 5756
GsuI CTGGAG 9 cut(s) 674, 1842, 2573, 4033, 5406, 6598, 6937, 7368, 7834
HaeII RGCGCY 2 cut(s) 3678, 8529
HapII CCGG 7 cut(s) 45, 797, 2530, 2571, 4531, 5677, 6498
HgaI GACGC 4 cut(s) 2929, 4062, 6235, 7591
HhaI GCGC 6 cut(s) 617, 1678, 2854, 3677, 8528, 8673
Hin1I GRCGYC 2 cut(s) 3675, 4054
Hin6I GCGC 6 cut(s) 615, 1676, 2852, 3675, 8526, 8671
HinP1I GCGC 6 cut(s) 615, 1676, 2852, 3675, 8526, 8671
HincII GTYRAC 7 cut(s) 802, 1354, 5376, 8205, 8386, 8723, 8814
HindII GTYRAC 7 cut(s) 802, 1354, 5376, 8205, 8386, 8723, 8814
HindIII AAGCTT 5 cut(s) 2081, 3458, 3855, 5343, 5390
HpaI GTTAAC 2 cut(s) 5376, 8386
HpaII CCGG 7 cut(s) 45, 797, 2530, 2571, 4531, 5677, 6498
Hpy99I CGWCG 1 cut(s) 6888
HpyCH4IV ACGT 9 cut(s) 847, 1286, 2502, 2919, 3597, 4163, 6040, 7308, 7774
HpySE526I ACGT 9 cut(s) 847, 1286, 2502, 2919, 3597, 4163, 6040, 7308, 7774
Hsp92I GRCGYC 2 cut(s) 3675, 4054
HspAI GCGC 6 cut(s) 615, 1676, 2852, 3675, 8526, 8671
KasI GGCGCC 1 cut(s) 3674
KpnI GGTACC 1 cut(s) 2788
KroI GCCGGC 1 cut(s) 4530
KroNI GCCGGC 1 cut(s) 4532
Ksp22I TGATCA 3 cut(s) 2922, 5619, 7408
KspAI GTTAAC 2 cut(s) 5376, 8386
LguI GCTCTTC 5 cut(s) 504, 1413, 2945, 3556, 6712
MaeII ACGT 9 cut(s) 847, 1286, 2502, 2919, 3597, 4163, 6040, 7308, 7774
MbiI CCGCTC 1 cut(s) 1464
MfeI CAATTG 3 cut(s) 8571, 8655, 9001
MflI RGATCY 9 cut(s) 111, 1130, 2243, 5326, 5614, 5929, 6218, 6500, 7972
MlsI TGGCCA 4 cut(s) 51, 447, 3328, 7005
MluI ACGCGT 1 cut(s) 7583
MluNI TGGCCA 4 cut(s) 51, 447, 3328, 7005
Mly113I GGCGCC 1 cut(s) 3675
MmeI TCCRAC 8 cut(s) 109, 322, 619, 2790, 4987, 6274, 7559, 7969
Mox20I TGGCCA 4 cut(s) 51, 447, 3328, 7005
Mph1103I ATGCAT 6 cut(s) 1702, 1723, 2285, 3997, 4263, 7459
MroNI GCCGGC 1 cut(s) 4530
MroXI GAANNNNTTC 5 cut(s) 480, 1787, 2223, 4794, 7503
MscI TGGCCA 4 cut(s) 51, 447, 3328, 7005
MslI CAYNNNNRTG 6 cut(s) 1228, 4042, 6241, 6918, 9072, 9145
Msp20I TGGCCA 4 cut(s) 51, 447, 3328, 7005
MspA1I CMGCKG 6 cut(s) 626, 1162, 2090, 6287, 6319, 6598
MspCI CTTAAG 3 cut(s) 1454, 1657, 2141
MspI CCGG 7 cut(s) 45, 797, 2530, 2571, 4531, 5677, 6498
MunI CAATTG 3 cut(s) 8571, 8655, 9001
Mva1269I GAATGC 9 cut(s) 555, 2154, 2580, 2854, 3051, 5371, 5801, 6366, 6725
MvnI CGCG 3 cut(s) 6241, 7585, 8902
NaeI GCCGGC 1 cut(s) 4532
NarI GGCGCC 1 cut(s) 3675
NciI CCSGG 2 cut(s) 2531, 5678
NcoI CCATGG 4 cut(s) 2295, 6812, 7470, 8544
NdeI CATATG 2 cut(s) 4803, 5208
NgoMIV GCCGGC 1 cut(s) 4530
NheI GCTAGC 1 cut(s) 5147
NmuCI GTSAC 9 cut(s) 1669, 1880, 2250, 2957, 3517, 4192, 4877, 5211, 5600
NruI TCGCGA 1 cut(s) 6241
NsbI TGCGCA 1 cut(s) 616
NsiI ATGCAT 6 cut(s) 1702, 1723, 2285, 3997, 4263, 7459
NspI RCATGY 8 cut(s) 305, 1169, 1839, 3835, 4480, 4609, 6784, 9144
NspV TTCGAA 4 cut(s) 34, 1747, 3181, 3716
PaeI GCATGC 1 cut(s) 9144
PagI TCATGA 5 cut(s) 1510, 1587, 2439, 3303, 7299
PasI CCCWGGG 1 cut(s) 8355
PceI AGGCCT 1 cut(s) 1625
PciI ACATGT 4 cut(s) 1835, 3831, 4476, 6780
PciSI GCTCTTC 5 cut(s) 504, 1413, 2945, 3556, 6712
PctI GAATGC 9 cut(s) 555, 2154, 2580, 2854, 3051, 5371, 5801, 6366, 6725
PdiI GCCGGC 1 cut(s) 4532
PdmI GAANNNNTTC 5 cut(s) 480, 1787, 2223, 4794, 7503
PflMI CCANNNNNTGG 2 cut(s) 6026, 7176
PfoI TCCNGGA 1 cut(s) 6614
PluTI GGCGCC 1 cut(s) 3678
PmaCI CACGTG 1 cut(s) 6041
PmlI CACGTG 1 cut(s) 6041
Ppu21I YACGTR 2 cut(s) 2503, 6041
PpuMI RGGWCCY 2 cut(s) 3260, 5013
PscI ACATGT 4 cut(s) 1835, 3831, 4476, 6780
PshAI GACNNNNGTC 1 cut(s) 5209
PshBI ATTAAT 3 cut(s) 575, 2999, 3116
PsiI TTATAA 3 cut(s) 4455, 7427, 7881
Psp124BI GAGCTC 3 cut(s) 4747, 7073, 7101
Psp5II RGGWCCY 2 cut(s) 3260, 5013
PspCI CACGTG 1 cut(s) 6041
PspEI GGTNACC 1 cut(s) 2666
PspFI CCCAGC 1 cut(s) 5752
PspOMI GGGCCC 1 cut(s) 3689
PspPPI RGGWCCY 2 cut(s) 3260, 5013
PsrI GAACNNNNNNTAC 2 cut(s) 1354, 1386
PstI CTGCAG 7 cut(s) 352, 1683, 2949, 6016, 6076, 6088, 6640
PstNI CAGNNNCTG 4 cut(s) 281, 311, 1808, 7799
PsuI RGATCY 9 cut(s) 111, 1130, 2243, 5326, 5614, 5929, 6218, 6500, 7972
PvuII CAGCTG 6 cut(s) 626, 1162, 2090, 6287, 6319, 6598
RruI TCGCGA 1 cut(s) 6241
RseI CAYNNNNRTG 6 cut(s) 1228, 4042, 6241, 6918, 9072, 9145
SacI GAGCTC 3 cut(s) 4747, 7073, 7101
SalI GTCGAC 1 cut(s) 800
SapI GCTCTTC 5 cut(s) 504, 1413, 2945, 3556, 6712
ScaI AGTACT 2 cut(s) 709, 6534
SfoI GGCGCC 1 cut(s) 3676
SfuI TTCGAA 4 cut(s) 34, 1747, 3181, 3716
SmiMI CAYNNNNRTG 6 cut(s) 1228, 4042, 6241, 6918, 9072, 9145
SmlI CTYRAG 7 cut(s) 218, 1431, 1454, 1657, 2141, 2830, 6860
SmoI CTYRAG 7 cut(s) 218, 1431, 1454, 1657, 2141, 2830, 6860
SpeI ACTAGT 1 cut(s) 7226
SphI GCATGC 1 cut(s) 9144
SseBI AGGCCT 1 cut(s) 1625
SspDI GGCGCC 1 cut(s) 3674
SspI AATATT 6 cut(s) 840, 1098, 7531, 7715, 8500, 8767
SstI GAGCTC 3 cut(s) 4747, 7073, 7101
StuI AGGCCT 1 cut(s) 1625
TaiI ACGT 9 cut(s) 850, 1289, 2505, 2922, 3600, 4166, 6043, 7311, 7777
TaqII GACCGA 1 cut(s) 5995
TatI WGTACW 7 cut(s) 419, 707, 1832, 3665, 4443, 6532, 7255
TauI GCSGC 3 cut(s) 1386, 3443, 5279
TseFI GTSAC 9 cut(s) 1669, 1880, 2250, 2957, 3517, 4192, 4877, 5211, 5600
Tsp45I GTSAC 9 cut(s) 1669, 1880, 2250, 2957, 3517, 4192, 4877, 5211, 5600
TspGWI ACGGA 6 cut(s) 3401, 4463, 5736, 6901, 7142, 8609
Van91I CCANNNNNTGG 2 cut(s) 6026, 7176
Vha464I CTTAAG 3 cut(s) 1454, 1657, 2141
VneI GTGCAC 1 cut(s) 2049
VspI ATTAAT 3 cut(s) 575, 2999, 3116
XagI CCTNNNNNAGG 1 cut(s) 4853
XceI RCATGY 8 cut(s) 305, 1169, 1839, 3835, 4480, 4609, 6784, 9144
XcmI CCANNNNNNNNNTGG 2 cut(s) 5807, 6700
XmiI GTMKAC 3 cut(s) 237, 801, 7601
XmnI GAANNNNTTC 5 cut(s) 480, 1787, 2223, 4794, 7503
ZrmI AGTACT 2 cut(s) 709, 6534
Zsp2I ATGCAT 6 cut(s) 1702, 1723, 2285, 3997, 4263, 7459
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.