MD15G1387600.v1.1

BEACH domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0002031
Physical Location & Seq
Forward (+)
47931549 .. 47963041
31493 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1387600.v1.1.491

Sequence Viewer

Length: 9813 bp
ATGAATATTGTCAAGGGTGTTGCTGACCTTATTCGAAGGACTTCTGGTGGCCACGATGGAGATTCTTCTTCAGGGACCCAAGCTCAGAAGTTCTCTCCTCCTGGCTCGAAGATCCGCTTTAGTGAAGTTGGAGATGAGGCGGTCCTAAACATACTTTGGGATAGATATGAAAAAGCTGTTGACAAGGTGGAAAAGAGGAGGCTGTTTCATGTTTTTCTTAAGCAGTTTCTGGCTGTATGCAAGAATTGGCAACCAGTAAATACAGGCCAAATGTCAGAGGCTGCTTCAACTACCGTTCAGTCTACAGAATATTCATCACATTCAGATGATGTAGTTATTGGCTGCTTTGCTGGACATCCTGCAGAAGTCATTTTAGTGTTGACTGAAGAGATTACACATATATCTTCTATGGTTGCCGATTTAAACAACAGTACAGTGCGATCGTCAGCAGATTTCTCTGGCCATTCCGCAACCTTAAATATCATTTCGGAAGGAATGCCACTCCTGGATGCTCTTATGATTGTTACTCGTTCATTGCATAATTGCAGAGTTTTTGGATACTACGGTGGGATTCAAAAGCTAACGGCATTAATGAAAGGGGCTGTTGTCCAGCTTAAAACAATAAGCGGTGCACTTTCAGCTGATGAAAAGTCTTCTAATTCAACTATGGAGAGGACTGGACTATTGCAACAAATACTTGTATATGTGGTGTCAATAATATGTAGTTTCATTGATTTAAATTCAAATGTATATGAGAAAGGTCAGTTGTACAGTAATACTATAGGCTTTGTTTCAAGGGGTGGTGCATCTCCAGTTGACTCTTCTGGTAGTTCAAAGGTTCCTTCCAGTGAAATAAGGTTACGATGGCAGCAGAGGGCAGTTGTGTCGGTGATGGAAGCTGGTGGACTTAATTGGTTAGTAGGTAAGCTGCTGCGTGTAATCAAAAGGTTAAGCATGAAAGAACAGTGGACGGATACATCACTTCTGTATTTGTCTTTGAGAATTCTTTATTTGACATTAGCTCAGAATCCTCGTGGTCAAAATCATTTTAAGAGCATTGGAGGACTTGAAGTTCTGTTGGATGGTCTTGGAATACCATCAAGTAATGTGCTAATATTGAAAAGTTCTGCTTCTGCCGTTGAGAAAAGATTTGAGAACCCCTTGCTAAAAATTTTCCAGCTTCATGTTCTTTCTCTGGAAGTTCTCAAAGAGGCTGTCTTTGGGAATATCAGCAACTTGCAATTTCTTTGTGAAAATGGGAGGGTTCACAAATTTGCAAATAGCTTTTGTTCGCCTGCTTTCATGTTTCAAGAGTACAAACAGCAGACCAAGAATATGCCTGGTCAGCCTGATTTCCAAACGCCTATGATTGACTTCGGAAGTGAGAATAATGTGAAAAACCATATAGCAGAGGCTTCTGTTGCACTTCCTGCCAATGGTTCTTTCTCTCAACTTTGGAGTGATTATGCTGTTAAGCTGAGCAGAGTATTTTGTTCTTTTCTTCCTGCTTCAGAAGATTTTAAATCTCATGATCTCGAAACATCCACTGGTCGAACTACTGTGGCAGTCTCTTCATTGTATGGTGAACTTTCAATCAAATGGATTATGAGGGTTCTTCATACTGTGTTCCCCTGCATTAAGGCCTGTTCAAATCAAAATGAACTGCCAAGCCACTTAAGGGTCTTTGTCAATACTCTGCAGCATTGTGTTTTAAATGCATTTAGGAATTTTCTTGTTTCATCTCCTGTGTCACTGAAAGTATTTCGGGAAGAGGGAATCTGGGAACTCATATTTTCTGAGAATTTTTTCTACTTTGGACCAGCGTCTGATGACCTTTCTGGAGAGTGTTGCACATATTATGAGTCCTTAAGGAGCCTTGAACTGCCCTCCGCTTCTAGTGGCATCAACAGTCAAGCAAAAGTTTGTGGGATTGAAATTCTCCAAATGGAAGTGATTTCATTTGTGGAGTTTGCTGCAACTTCTAGTGGAAGTGCTCATAACTTGCCTGAATTATCTGCTTTGTTAGATGCCCTTGAACACTCTGCTTGCAATCCTGAAGTTGCTAGTGTTCTTGCCAAGAGTCTGCGTCGCGTGTTACAGCTTTCAGCTGAGAAAACTGTTGCTTCTTTTAAGGCAGTTAATGCATTTCCTCGTGTGCTTAAAGTTGCTTGCATTCAAGCCCAAGAGTCAAGAAGGTTTGGCAATATAAGCCCTTCTCTTGAAAAAAATATTGATGAAGTGGTGCCTAGTCATCAGGGATCCAAATCACATCAGACAATGCAAAGATGGCTTAAATGCATGGAGACATCCATGGAGCTCTATATGGAATTTTTCTTAACAGCAGAAGATGCTAGAAGTTTGGTTCTGCATAGCGCCGAATGTATTGGTTATTTATTTGATTTGTTCTGGGAAGAAGGTTTCAGGGACAATGTGCTTAGGCATATATTTGAGCTGATGAAGACTGTACCATCATCTGAAGAGGATCAAAGAGCAAAATTACAGTTATTTTCTAAATACTTGGAAACGTTCACTCAAATAAAGGAACGAGAGAAAAGCTTTGCAGAACTGTCAATCTATTTACTTGTTGGAATGAGAGATATGCTCAAGATTGATCCTGTGTACTATCAGACTTTATTTCGTGATGGAGAGTGCTTTTTGCACGTTGTCTCTTTACTAAATGGTAACCTTGAGGAGGGCAGTGGAGAAAACTTGGTTCTGAATGTTCTTCAAACTCTTACCTGTCTGCTTGCAAGCAATGATACATCAAAGGCTACATTTAGAGTTCTTGCAGGCAAGGGATACCAGACATTGCAAAGCTTACTGTTGGAGTTTTGTCAGTCACGCTCAAGTGAAGGACTTTTGAATGCTTTGCTTGATATGCTTGTTGATGGAAAGTTTGATATGAAATCAGGCCCTAAAATAAAGAATGAAGACGTGATTATACTTTATCTGCGTGTTTTGCGGGAGAGCAGTGACTCGTTGCAGCATAACGGGCTGGATGTGTTCCAACAACTACTGAGGGATTCCATTTCCAATCAGGCTTCCTGCGTCAGAGCGGGAATGCTTAATTTTCTTCTTGATTGGTTTTCACAAGAAGACAATGATAGTGTCATCTTGAAAATTGCCCAACTAATTCAGGTTGTTGGTGGACATAGCACATCTGGAAAAGACATTCGCAAAATCTTTGCCCTTCTCCGAAGTGAGAAAGTTGGGAATCAGCAAAAGTATTGCTCACTATTGTTGTCCAGTGTTTTGTCAATGCTAAATGAAAAGGGTCCTACTGCCTTCTTTGACTTCACTGGGAATGATTCTGGGATCATAATAAAAACGCCTGTGCAGTGGCCTCTGAATAAAGGATTTTCTTTTTCATGTTGGCTTCGTGTGGAGAATTTCCCCAGAAGTGGAAAAATGGGTCTTTTCAATTTTCTTGCAGAAAATGGACGAGGGTGTATGGCTGCACTTGCAAAGGACAAGCTTGTTTATGAGTCAATAAATCTGAAGCGACAATCGGTCCAGTTACAGGTTAATATTGTTAGAAAGAAATGGCATTTTCTATGTATAACTCATAGCATTGGAAGAGCATTTTCTGGGGGTAGCTTATTGAGGTGTTACGTGGATGGTGATCTCGTTTCTTCTGAAAGATGCAGATATGCCAAAGTTAATGAATTATTAACAAGTTGTAGAATTGGCGCAAAATTTGATATACGCCTGCATGACGACGATTTGGCTCTGGAATCTGTAAAAGATTCACATCCTTTCCTCGGTCAGATTGGTCCTGTTTATGTATTTAATGATACCATTTCTTCTGAGCAAGTTCAGGGCATATATTCTCTTGGACCAAGCTACATGTATTCGTTTCTTGACAGTGAAGCCGCCTCATCTAAGGATAACCCAGTGCTTAATGGGATCCTTGATGCCAAAGATGGTCTTGCATCAAAAATTCTTTTTGGACTTAATGCACAGGCATGTGATGGCAGGAAACTCTTTAATGTTTCACCAATGCTGGACCATGTATCAGATAAGAACTCATTTGAAGCAACTGTGATGGTTGGCACGCAGCAATGCTCCAGACGATTATTGCAACAGATAATTTACTGTGTTGGAGGTGTATCAGTGTTTTTTCCTCTTATTGCCCAGTCTGAAAAATATGAAAGTGAAGAAAGTGGGAAATTGGAGCATACATTGCCTATTATCACGAGAGAACGGGTGACTGCTGAAGTTATTGAGCTCATAGCTTCTGTTCTGGATGAGAACTTAGCTAATCAACAACAGATGCATCTTCTCTCTGGATTCTCAATACTAGGGTTCTTGTTGCAATCAGTTCCTCCTCAGCAGCTTAATTTGGAAACACTTTCAGCCTTAAAACATCTATTTTATGTCGTTGCAAACTGCGGCTTGGCGGAGCTGCTTACTAAAGAGGCTATATCTAGCATATTTCTTAACCCTCTCATCTGGTTGTATACGGCTTATAAGGTGCAGCGTGAGTTATACATGTTTCTCATCCAGCAGTTTGATAATGACCCAAGGTTACTTAAAAGCCTTTGCCGGCTCCCCCGTGTTATAGATATAATACGCCAATTTTATTGGGATAATCCAAAATCTCGATTTTCTGTTGGAAACACGCCTCTTCTTCATCCCATCACAAAACAAGTTCTTGGGGAGAGACCCAGTAATGATGAGATACGAAAAATTCGTCTTGTTTTGTTGAGCCTTGGTGAAATGAGCCTCAGGCAGAAAATTGCAGCCGCAGATATAAGAGCTTTAATAGCTTTTTTCGAAACAAGTCAGGATTCAACCTGTATTGAGGATGTTTTACATATGCTTGTTCGAGCGCTTTCTCAAAAACCACTGCTTGCAGCTTTCCTGGAGCAGGTCAACCTGATCGGTGGTTGTCACATGTTTGTTAATCTTCTTCAGAGGGAATATGAACCTATTAGATTGCTCAGCTTGCAACTCCTTGGGAGACTTTTGGTTGGTCTTCCATCTGAGAAGAAGGGAGCAAGATTTTTTAATCTTGCAGTTGGAAGATCTCGGTTTCTTTCAGATGGCCAAAAAAAAATTAGTATGAAGATGCAACCAATTTTCTCAGCCATGTCTGATAGGTTATTCAGGTTTCCACAAACAGATAACTTGTGTGCTTCGTTGTTTGATGCTCTTCTTGGTGGTGCTAGCCCCAAACAGGTGTTACAGAAACACCACCAGGTTGAAAGGCAGAGAAACAAAGCAAATAGCACTCATTTTCTCCTTCCGCAAATTTTGGTTCTTATTTTCAGATTCCTGTCTGGCTGTGAGGATGCAGGTTCAAGACTGAAAATTGTCAGAGACTTACTTGATCTTCTTGATTCTGATCCTTCAAATGTTGAAGCTTTTATGGAATTTGGCTGGAATGCCTGGTTAACAGCTTGTGTAAAGCTTGGTGTATTCAAAAACTACAAGGTTAATCCCCAAGACCAAGATGACAATGAGAAAAATGAGCAAGATATGGTGAGGAATCTGTTTGGTGTTGTTCTTTGTTACTATGTACATTCTGTCAAAGGTGGGTGGCAGCAGTTAGAAGATACAGTGACTTTCCTACTAATGCAGTGTGAACATGGGGGCATTTCATTTCGATACTTGCTTCGAGATATATATAAGGATTTGATCAGTAAACTTGTGGAATTGTCTTCTGAAGAGAATGTCTTCATCTCGCAACCATGCCGGGACAACACGTTATACCTTCTAAGACTGGTCGATGAGATGCTTATCTCTGAAATAGACCAAAAACTTCCGTTTCCGGCTAGTAACTCTGACTTTTCCCTGGATTCGCTGGAGCTAGAACGCCATAAAGATTATGGCTCTGCCTTATATGAAGTGCTAGAAGGAGAAATTGATAGCCAAACATCCAGGATCCCTGGTAGTTACAAGCAGCCAATCAGTAATGCAGATGACATAGTAAATGACCAGTGGTGGAATCTGTATGACAATTTGTGGATTATCATAAGTGAGATGAATGGTAAGGGACCAAGCAAGACGTCCCCCAAGCCATCACCATCTGCAGGTCCATCTTTGGGCCAAAGAGCACGTGGCTTAGTAGAATCTCTGAATATTCCTGCTGCGGAGGTAGCTGCAGTTGTTGTATCAGGAGGGATAGGCAGTGCTCTAGGTGGCAAACCTAACAAAAATGTTGATAAGGCAATGCTCTTGCGAGGGGAAAGGTGCCCAAGAATTATTTTTAGACTTGTCATCCTATATCTATGCAGATCTTCTCTGGAAAGATCATCGCGTTGCGTCCAACAGGTCATTTCGCTTTTGCCATGTCTCTTGGCAGCTGATGATGAGCAAAGCAAAAGCAGATTGCAACTGTTCATTTGGGCTTTGCTTGTGGTTAGGTCGCAGTTTGGAATGTTGGATGATGGTGCTCGTTTTCATGTGATATCACACTTGATTCGAGAAACTGTCAACTTTGGCAAATCAATGCTGGCTACTAGCATGATGGGGAGAGAGGACTCCTTGGACTCGGGAAACAGTGTAAAAGAAACAGGATCTATTCAGAATTTAATTCAGAGGGATCGAGTGCTAGCAGCAGTAGGTGATGAGGCAAAATATACAAAGTCATTAGATACAGATCGTCAAAGGCAGTTGTGTGAGCTCCAACTTAGGATGGATGAAAATTCCTCTTCAGAATCTAATACCAGGAAAGCTTTTGAAGATGAGATACAGAGTAGCTTGGCCTCCATTCTTGCTTTAGATGACAGCAGAAGAGCTGCATTCCAGCTCGCTCATGAGGAGGAGCAACAAAATGTTGCTGAAAAATGGATACACATGTTTCGTGCTTTGATTGATGAGAGAGGTCCATGGTCTGCTAATCCTTTTCCAAATAGTGCTGTGAGGCATTGGAAACTTGACAAGATAGAAGATGCTTGGCGACGTAGGCAAAAGCTGAGACAGAATTATCATTTTGATGAAAAGCTGTGTCATCCTTCATCATCTGTGCCCAGCAATGACATTGCACCTCCTGTTAATGAAAGTAAATGTGGTTTTGTGGGGCACATTCCTGAGCAAATGAAGCGGTTTTTGCTGAAGGGGGTATGGAAGATAACTGATGATGGGAGCTCAGAATCCAATGAAATTGATAATGAACTTGGAGGGCAGAAACCCACCCTCCCTAAAGATACTTCAGACAGCCAGTGCTCGGAATTATCCAAAGACAGCGGTGATTGGATGCAGGAAAGAAAAGATTCTTCATCCTCTTCACTTGAGACAGAAACTAGTGAGGTTCTTACGTCGGTTCCTTGTGTGCTTGTAACCCCAAAAAGAAAATTAGGTGGACATTTGGCAGTGATGAAAGATGTTTTGCATTTCTTTGGTGAATTTTTGGTTGAAGGTAGTGGAGGATCATCTGTTTTCAGAAATTTCCATGCTTCAAGTAATCATGATTTGACCAAACCTGATCAAAAGCAAAAGTCTCTGAAACAGCCTCTATATCTTGGTTTGGATGCTGAGAAGGGAGCCACAGTTGATAAATTTGATGCAACGAATGAAAATGTTCTTAATAGAAAACAGTTAAAAAATATGAAGCGCCACAGGAGATGGAATATTGGCAAGATAAAAGCTGTCTGTTGGACTCGTTATTTGCTTCGATATTCTGCAATAGAGATTTTCTTCAGTGATTCATCTGCACCAGTGTTTTTGAATTTTGCATCCCTGAAGGATGCAAAAGATACTGGAACCTTGATAGTTGCTACCCGAAATGAATATTTGTTTCCAAAAGGAAGTAGTCGGGACAAAAATGGAGCTATTTCATTTGTTGATAGACGTGTAGCACTGGAGATGGCAGAAACTGCTCGAGAGAGCTGGAGGAGGAGGGATATGACAAATTTTGAATATCTAATGATTCTCAATACACTGGCTGGAAGATCATATAATGATTTGACCCAATACCCTGTTTTTCCTTGGGTCTTGGCTGATTACTCCTCTGAGGTTCTTGATTTTAACAAGTCTTCCACTTTTCGGGATCTTTCAAAACCAGTTGGAGCACTTGATATAAAGCGATTTGAGGTATTTGAAGATAGGTATCGTAGCTTCACTGATCCTGATATACCTAGTTTTTACTATGGGTCTCATTACTCAAGCATGGGGATTGTGCTTTATTACCTTCTGAGATTAGAGCCATTTACTTCTCTCCATCGAAATTTACAGGGTGGTAAATTTGACCATGCTGACCGTCTCTTTCAAAGCATTGAGGGAACATATCAGAACTGCCTTACTAATACAAGTGATGTGAAGGAGTTAATACCGGAGTTCTTTTACATGCCAGAGTTTCTTGTCAATTCAAATGCTTATCATTTTGGTGTGAAGCAAGATGGTGAACCTATTGCAGATGTTTGTCTCCCACCCTGGGCCAAGGGCTCACCTGAAGAATTTATTAACAAGAACAGAGAAGCCCTTGAAAGCGAATATGTTAGCTCTAATCTACACCATTGGATAGATTTGGTATTTGGTTACAAGCAGCGTGGAAAACCAGCTGTGGAGGCTGCAAATATTTTTTATTACTTAACGTATGAAGGTGCTGTTGATCTGGAGACCATGGAAGATGATTTGCAAAGGTCAGCTATTGAAGACCAAATTGCAAATTTTGGCCAGACACCAATTCAGATTTTCCGTAAAAAACACCCAAGAAGAGGGCCACCTATTCCAATTGCACATCCTTTGCGCTTTGCACCTGGTTCTATTAACTTGACTTCCATTGTTTGTAGTACAAGTCATACACGGTCGGCTGCTTTATATGTTCGGACCAAGGACTCCAATGTTGTTCTTGTAAGCCAGGGTCTCACCTTGTCAGTTAAGATGTGGTTGACAACCTCACTGCAATCTGGTGGAAATTTTACCTTCTCTAGCTCCCAGGATCCTTCATTTGGCGTTGGTTCTGATATTCTCTCTCCTCGTAAATTTGGGAGTCCTTCAGCTGAAAATGTTGAACTTGGAGCTCAATGCTTTGCAACCATGCAAACACCATCTGAGAATTTTTTGATCTCATGTGGCAATTGGGAAAATAGCTTTCAGGTTATATCCTTAAATGATGGCAGAATGGTACAAAGCATCAGACAGCATAAGGATGTGGTTAGTTGTGTTGCAGTGACATTTGATGGAAGCTTCCTTGCAACTGGAAGTTATGACACTACAATCATGGTGTGGAAAGTCTTCCGAGGTAGAACCCAAGAAAAGAGACCTCGTAATACACAGACAGAACTACCACGCAAAGATTATGTCATTGTTGAAACTCCTTTTCGTATTCTCTGTGGACACGATGATATAATTACATGCTTGTATATCAGCGTGGAGCTTGACATTGTGATCAGTGGATCAAAAGACGGAACTTGTGTTTTTCATACCCTGCAGAGTGGAAGATATGTAAGATCCTTGCGCCATCCATCTGGATGTGCATTGTCAAAGCTCGTCGCTTCTCAACATGGACGGATTGTGTTTTATGCTGATGATGATCTGAGTTTGCATCTTTATTCAATTAATGGTAAACATCTTGCTTCTTCTGAATCCAATGGACGCCTCAACTGTGTTGAGCTGAGTGGGTGTGGTGAATTTTTGGTTTGTGCCGGTGACCAAGGGCAAATAGTTGTACGCTCTATGAATTCACTCGAGGTCATAAAGAAATATGATGGTGTTGGAAAGATTATAACATCTCTAACAGTGACCCCAGAAGAATGCTTCTTAGCTGGAACAAAAGATGGAACCATTCTCGTATATTCTATGGAAAATACTCAACTTCGCAAAGGCCTTCCTCGAAATTCAAAATCCAAACCTTCTTCAACAGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Beach DUF4704 DUF4800 Laminin_G_3 PH_BEACH WD40

Protein Analysis

3271

Amino Acids

366.42

Weight (kDa)

6.5

Isoelectric Point (pI)

44.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Neurobeachin PF20425 667 - 1088 2.5e-218 Neurobeachin alpha solenoid region
Laminin_G_3 PF13385 1101 - 1273 3.1e-08 Concanavalin A-like lectin/glucanases superfamily
DUF4704 PF15787 1340 - 1859 1e-161 Neurobeachin/BDCP, DUF4704 alpha solenoid region
DUF4800 PF16057 2218 - 2316 5.6e-07 Domain of unknown function (DUF4800)
PH_BEACH PF14844 2506 - 2567 3e-10 PH domain associated with Beige/BEACH
Beach PF02138 2611 - 2887 1.5e-123 Beige/BEACH domain
NBCH_WD40 PF20426 2908 - 3256 1e-201 Neurobeachin beta propeller domain
Beta-prop_EML_2 PF23414 2985 - 3132 5.5e-06 Echinoderm microtubule-associated protein second beta-propeller
WD40_Prp19 PF24814 2990 - 3172 7.7e-11 Prp19 WD40 domain
Beta-prop_WDR5 PF25175 2997 - 3065 3.3e-08 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 2999 - 3064 5.2e-07 WDR3 first beta-propeller domain
Beta-prop_THOC3 PF25174 2999 - 3060 7.3e-07 THOC3 beta-propeller domain
Beta-prop_TEP1_2nd PF25047 2999 - 3175 1.8e-07 TEP-1 second beta-propeller
WD40 PF00400 3022 - 3058 2.2e-07 WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1 PF24105 3022 - 3175 4.8e-07 CAF1B/HIR1 beta-propeller domain
Beta-prop_THOC3 PF25174 3092 - 3256 1.9e-09 THOC3 beta-propeller domain
WDR55 PF24796 3095 - 3249 2.5e-06 WDR55
WD40_WDHD1_1st PF24817 3098 - 3256 4.9e-06 WDHD1 first WD40 domain
Beta-prop_EML_2 PF23414 3152 - 3254 1.5e-06 Echinoderm microtubule-associated protein second beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 4470, 9671
AatII GACGTC 1 cut(s) 6014
Acc36I ACCTGC 3 cut(s) 4861, 5288, 6026
AccB1I GGYRCC 2 cut(s) 2242, 6195
AccBSI CCGCTC 1 cut(s) 3056
AccI GTMKAC 2 cut(s) 302, 4460
AccII CGCG 2 cut(s) 2091, 6262
AclI AACGTT 1 cut(s) 2525
AcoI YGGCCR 4 cut(s) 49, 460, 5047, 8617
AcvI CACGTG 1 cut(s) 6062
AcyI GRCGYC 2 cut(s) 6011, 9541
AfaI GTAC 9 cut(s) 433, 770, 1316, 2466, 2621, 5523, 8737, 9072, 9615
AfeI AGCGCT 1 cut(s) 4833
AflII CTTAAG 3 cut(s) 218, 1675, 1867
AflIII ACRYGT 6 cut(s) 3846, 4491, 4896, 5706, 6801, 7795
AhdI GACNNNNNGTC 1 cut(s) 3509
AhlI ACTAGT 1 cut(s) 7247
AjiI CACGTC 2 cut(s) 2935, 7796
AjuI GAANNNNNNNTTGG 2 cut(s) 1427, 1459
AloI GAACNNNNNNTCC 2 cut(s) 1056, 1088
Alw44I GTGCAC 1 cut(s) 630
AlwNI CAGNNNCTG 4 cut(s) 229, 281, 1826, 7820
Ama87I CYCGRG 3 cut(s) 6496, 7824, 9632
Aor51HI AGCGCT 1 cut(s) 4833
ApaLI GTGCAC 1 cut(s) 630
ArsI GACNNNNNNTTYG 8 cut(s) 1200, 1232, 4678, 4710, 7594, 7626, 9231, 9263
AseI ATTAAT 2 cut(s) 590, 9504
Asp700I GAANNNNTTC 6 cut(s) 40, 1805, 5678, 7216, 7524, 9179
AspLEI GCGC 6 cut(s) 2375, 3692, 4834, 7560, 8694, 9405
AsuC2I CCSGG 1 cut(s) 5699
AsuII TTCGAA 2 cut(s) 34, 4776
AsuNHI GCTAGC 2 cut(s) 5168, 6556
AvaI CYCGRG 3 cut(s) 6496, 7824, 9632
AxyI CCTNAGG 1 cut(s) 4727
BaeGI GKGCMC 4 cut(s) 634, 6200, 6975, 7029
BaeI ACNNNNGTAYC 4 cut(s) 550, 583, 6788, 6821
BalI TGGCCA 4 cut(s) 51, 462, 5049, 8619
BamHI GGATCC 4 cut(s) 2258, 3906, 5886, 8884
BanI GGYRCC 2 cut(s) 2242, 6195
BanII GRGCYC 6 cut(s) 2319, 4230, 6630, 7094, 8390, 8968
BarI GAAGNNNNNNTAC 4 cut(s) 6678, 6710, 8045, 8077
BauI CACGAG 3 cut(s) 1032, 2151, 4195
BbrPI CACGTG 1 cut(s) 6062
BbvCI CCTCAGC 1 cut(s) 4329
BceAI ACGGC 3 cut(s) 600, 1121, 4479
BcgI CGANNNNNNTGC 2 cut(s) 867, 901
BciVI GTATCC 4 cut(s) 551, 967, 2792, 6789
BclI TGATCA 3 cut(s) 5640, 7429, 9333
BcnI CCSGG 1 cut(s) 5699
BcuI ACTAGT 1 cut(s) 7247
BfmI CTRYAG 7 cut(s) 303, 360, 780, 1697, 6033, 6105, 9374
BfoI RGCGCY 3 cut(s) 2376, 4835, 7561
BfrI CTTAAG 3 cut(s) 218, 1675, 1867
BfuAI ACCTGC 3 cut(s) 4861, 5288, 6026
BfuI GTATCC 4 cut(s) 551, 967, 2792, 6789
BglII AGATCT 2 cut(s) 5027, 6239
BlpI GCTNAGC 2 cut(s) 1478, 4943
BmeRI GACNNNNNGTC 1 cut(s) 3509
BmeT110I CYCGRG 3 cut(s) 6496, 7824, 9632
BmgBI CACGTC 2 cut(s) 2935, 7796
BmrI ACTGGG 4 cut(s) 3309, 3887, 4129, 4662
BmtI GCTAGC 2 cut(s) 5172, 6560
BmuI ACTGGG 4 cut(s) 3309, 3887, 4129, 4662
BoxI GACNNNNGTC 1 cut(s) 1822
BplI GAGNNNNNCTC 2 cut(s) 2586, 2618
BpmI CTGGAG 8 cut(s) 795, 1860, 4051, 4886, 5828, 7826, 7855, 8579
Bpu10I CCTNAGC 3 cut(s) 2435, 4329, 7035
Bpu1102I GCTNAGC 2 cut(s) 1478, 4943
Bpu14I TTCGAA 2 cut(s) 34, 4776
BpuEI CTTGAG 5 cut(s) 2588, 2708, 2830, 7256, 8092
BpuMI CCSGG 1 cut(s) 5699
BsaAI YACGTR 2 cut(s) 3613, 6062
BsaBI GATNNNNATC 8 cut(s) 2263, 3621, 3750, 5346, 5741, 6603, 8052, 9477
BsaHI GRCGYC 2 cut(s) 6011, 9541
BsaI GGTCTC 5 cut(s) 4657, 8103, 8555, 8813, 9199
BsaWI WCCGGW 1 cut(s) 8275
BsaXI ACNNNNNCTCC 4 cut(s) 7125, 7155, 7479, 7509
Bse118I RCCGGY 2 cut(s) 4545, 9590
Bse21I CCTNAGG 1 cut(s) 4727
Bse3DI GCAATG 8 cut(s) 533, 2761, 2807, 4067, 4181, 6180, 6984, 6985
Bse8I GATNNNNATC 8 cut(s) 2263, 3621, 3750, 5346, 5741, 6603, 8052, 9477
BseJI GATNNNNATC 8 cut(s) 2263, 3621, 3750, 5346, 5741, 6603, 8052, 9477
BseMI GCAATG 8 cut(s) 533, 2761, 2807, 4067, 4181, 6180, 6984, 6985
BseSI GKGCMC 4 cut(s) 634, 6200, 6975, 7029
BseYI CCCAGC 1 cut(s) 6974
BsgI GTGCAG 4 cut(s) 3356, 3441, 4496, 7641
Bsh1236I CGCG 2 cut(s) 2091, 6262
Bsh1285I CGRYCG 2 cut(s) 443, 8753
BshNI GGYRCC 2 cut(s) 2242, 6195
BsiEI CGRYCG 2 cut(s) 443, 8753
BsiHKCI CYCGRG 3 cut(s) 6496, 7824, 9632
BsiSI CCGG 5 cut(s) 4546, 5698, 5774, 8276, 9591
BslFI GGGAC 6 cut(s) 88, 2438, 5714, 5998, 6012, 7775
BsmBI CGTCTC 1 cut(s) 8210
BsmFI GGGAC 6 cut(s) 88, 2438, 5714, 5998, 6012, 7775
BsmI GAATGC 7 cut(s) 501, 2172, 2869, 3066, 5392, 6746, 9704
Bso31I GGTCTC 5 cut(s) 4657, 8103, 8555, 8813, 9199
BsoBI CYCGRG 3 cut(s) 6496, 7824, 9632
Bsp119I TTCGAA 2 cut(s) 34, 4776
Bsp1407I TGTACA 2 cut(s) 768, 5521
Bsp1720I GCTNAGC 2 cut(s) 1478, 4943
Bsp19I CCATGG 3 cut(s) 2310, 6833, 8565
BspFNI CGCG 2 cut(s) 2091, 6262
BspHI TCATGA 3 cut(s) 1528, 6760, 7411
BspMAI CTGCAG 5 cut(s) 364, 1701, 6037, 6109, 9378
BspMI ACCTGC 3 cut(s) 4861, 5288, 6026
BspOI GCTAGC 2 cut(s) 5172, 6560
BspQI GCTCTTC 3 cut(s) 3571, 5160, 6733
BspT104I TTCGAA 2 cut(s) 34, 4776
BspT107I GGYRCC 2 cut(s) 2242, 6195
BspTI CTTAAG 3 cut(s) 218, 1675, 1867
BspTNI GGTCTC 5 cut(s) 4657, 8103, 8555, 8813, 9199
BsrBI CCGCTC 1 cut(s) 3056
BsrDI GCAATG 8 cut(s) 533, 2761, 2807, 4067, 4181, 6180, 6984, 6985
BsrFI RCCGGY 2 cut(s) 4545, 9590
BsrGI TGTACA 2 cut(s) 768, 5521
BssAI RCCGGY 2 cut(s) 4545, 9590
BssNAI GTATAC 1 cut(s) 4461
BssNI GRCGYC 2 cut(s) 6011, 9541
BssSI CACGAG 3 cut(s) 1032, 2151, 4195
Bst1107I GTATAC 1 cut(s) 4461
Bst2BI CACGAG 3 cut(s) 1032, 2151, 4195
BstACI GRCGYC 2 cut(s) 6011, 9541
BstAFI CTTAAG 3 cut(s) 218, 1675, 1867
BstAPI GCANNNNNTGC 5 cut(s) 1430, 2141, 2348, 4183, 7820
BstAUI TGTACA 2 cut(s) 768, 5521
BstBAI YACGTR 2 cut(s) 3613, 6062
BstBI TTCGAA 2 cut(s) 34, 4776
BstDSI CCRYGG 3 cut(s) 2310, 6833, 8565
BstEII GGTNACC 2 cut(s) 2681, 9593
BstENI CCTNNNNNAGG 2 cut(s) 2690, 4868
BstFNI CGCG 2 cut(s) 2091, 6262
BstH2I RGCGCY 3 cut(s) 2376, 4835, 7561
BstHHI GCGC 6 cut(s) 2375, 3692, 4834, 7560, 8694, 9405
BstMCI CGRYCG 2 cut(s) 443, 8753
BstNSI RCATGY 7 cut(s) 3850, 3969, 4495, 4900, 6805, 8293, 9303
BstPAI GACNNNNGTC 1 cut(s) 1822
BstPI GGTNACC 2 cut(s) 2681, 9593
BstSFI CTRYAG 7 cut(s) 303, 360, 780, 1697, 6033, 6105, 9374
BstSLI GKGCMC 4 cut(s) 634, 6200, 6975, 7029
BstUI CGCG 2 cut(s) 2091, 6262
BstXI CCANNNNNNTGG 1 cut(s) 9413
BstZ17I GTATAC 1 cut(s) 4461
Bsu36I CCTNAGG 1 cut(s) 4727
BsuI GTATCC 4 cut(s) 551, 967, 2792, 6789
BtgI CCRYGG 3 cut(s) 2310, 6833, 8565
BtgZI GCGATG 1 cut(s) 6243
BtrI CACGTC 2 cut(s) 2935, 7796
BtsI GCAGTG 9 cut(s) 2704, 2977, 3344, 4847, 5588, 6139, 7323, 8843, 9120
BveI ACCTGC 3 cut(s) 4861, 5288, 6026
CaiI CAGNNNCTG 4 cut(s) 229, 281, 1826, 7820
CciI TCATGA 3 cut(s) 1528, 6760, 7411
CfoI GCGC 6 cut(s) 2375, 3692, 4834, 7560, 8694, 9405
Cfr10I RCCGGY 2 cut(s) 4545, 9590
CseI GACGC 5 cut(s) 1812, 2075, 3037, 6256, 9549
CsiI ACCWGGT 2 cut(s) 5199, 8701
Csp6I GTAC 9 cut(s) 432, 769, 1315, 2465, 2620, 5522, 8736, 9071, 9614
CspCI CAANNNNNGTGG 2 cut(s) 8473, 8508
CviQI GTAC 9 cut(s) 432, 769, 1315, 2465, 2620, 5522, 8736, 9071, 9614
DraI TTTAAA 4 cut(s) 423, 738, 1522, 1713
DriI GACNNNNNGTC 1 cut(s) 3509
EaeI YGGCCR 4 cut(s) 49, 460, 5047, 8617
Eam1105I GACNNNNNGTC 1 cut(s) 3509
EciI GGCGGA 1 cut(s) 4415
Ecl136II GAGCTC 5 cut(s) 2317, 4228, 6628, 7092, 8966
Eco147I AGGCCT 2 cut(s) 1643, 9771
Eco24I GRGCYC 6 cut(s) 2319, 4230, 6630, 7094, 8390, 8968
Eco31I GGTCTC 5 cut(s) 4657, 8103, 8555, 8813, 9199
Eco32I GATATC 1 cut(s) 6414
Eco47III AGCGCT 1 cut(s) 4833
Eco53kI GAGCTC 5 cut(s) 2317, 4228, 6628, 7092, 8966
Eco72I CACGTG 1 cut(s) 6062
Eco81I CCTNAGG 1 cut(s) 4727
Eco88I CYCGRG 3 cut(s) 6496, 7824, 9632
Eco91I GGTNACC 2 cut(s) 2681, 9593
EcoICRI GAGCTC 5 cut(s) 2317, 4228, 6628, 7092, 8966
EcoNI CCTNNNNNAGG 2 cut(s) 2690, 4868
EcoO109I RGGNCCY 3 cut(s) 75, 2912, 3275
EcoO65I GGTNACC 2 cut(s) 2681, 9593
EcoRI GAATTC 2 cut(s) 1002, 9625
EcoRV GATATC 1 cut(s) 6414
EcoT22I ATGCAT 4 cut(s) 1720, 2146, 2300, 4278
EcoT38I GRGCYC 6 cut(s) 2319, 4230, 6630, 7094, 8390, 8968
Esp3I CGTCTC 1 cut(s) 8210
FalI AAGNNNNNCTT 6 cut(s) 101, 133, 1114, 1146, 3912, 3944
FaqI GGGAC 6 cut(s) 88, 2438, 5714, 5998, 6012, 7775
FauI CCCGC 2 cut(s) 2955, 3049
FauNDI CATATG 1 cut(s) 4818
FbaI TGATCA 3 cut(s) 5640, 7429, 9333
FblI GTMKAC 2 cut(s) 302, 4460
FriOI GRGCYC 6 cut(s) 2319, 4230, 6630, 7094, 8390, 8968
GlaI GCGC 6 cut(s) 2374, 3691, 4833, 7559, 8693, 9404
GsaI CCCAGC 1 cut(s) 6978
GsuI CTGGAG 8 cut(s) 795, 1860, 4051, 4886, 5828, 7826, 7855, 8579
HaeII RGCGCY 3 cut(s) 2376, 4835, 7561
HapII CCGG 5 cut(s) 4546, 5698, 5774, 8276, 9591
HgaI GACGC 5 cut(s) 1812, 2075, 3037, 6256, 9549
HhaI GCGC 6 cut(s) 2375, 3692, 4834, 7560, 8694, 9405
Hin1I GRCGYC 2 cut(s) 6011, 9541
Hin6I GCGC 6 cut(s) 2373, 3690, 4832, 7558, 8692, 9403
HinP1I GCGC 6 cut(s) 2373, 3690, 4832, 7558, 8692, 9403
HincII GTYRAC 7 cut(s) 181, 381, 817, 4876, 5397, 6439, 8835
HindII GTYRAC 7 cut(s) 181, 381, 817, 4876, 5397, 6439, 8835
HindIII AAGCTT 7 cut(s) 2554, 2815, 3473, 5364, 5411, 6678, 9130
HpaI GTTAAC 1 cut(s) 5397
HpaII CCGG 5 cut(s) 4546, 5698, 5774, 8276, 9591
Hpy99I CGWCG 5 cut(s) 2091, 3722, 6909, 7267, 9440
Hsp92I GRCGYC 2 cut(s) 6011, 9541
HspAI GCGC 6 cut(s) 2373, 3690, 4832, 7558, 8692, 9403
KflI GGGWCCC 1 cut(s) 75
KroI GCCGGC 1 cut(s) 4545
KroNI GCCGGC 1 cut(s) 4547
Ksp22I TGATCA 3 cut(s) 5640, 7429, 9333
KspAI GTTAAC 1 cut(s) 5397
LguI GCTCTTC 3 cut(s) 3571, 5160, 6733
MabI ACCWGGT 2 cut(s) 5199, 8701
MbiI CCGCTC 1 cut(s) 3056
MfeI CAATTG 2 cut(s) 8676, 9022
MlsI TGGCCA 4 cut(s) 51, 462, 5049, 8619
MluNI TGGCCA 4 cut(s) 51, 462, 5049, 8619
Mox20I TGGCCA 4 cut(s) 51, 462, 5049, 8619
Mph1103I ATGCAT 4 cut(s) 1720, 2146, 2300, 4278
MroNI GCCGGC 1 cut(s) 4545
MroXI GAANNNNTTC 6 cut(s) 40, 1805, 5678, 7216, 7524, 9179
MscI TGGCCA 4 cut(s) 51, 462, 5049, 8619
MslI CAYNNNNRTG 7 cut(s) 324, 374, 3964, 6939, 8328, 9093, 9415
Msp20I TGGCCA 4 cut(s) 51, 462, 5049, 8619
MspA1I CMGCKG 6 cut(s) 641, 2108, 6308, 7191, 8504, 8945
MspCI CTTAAG 3 cut(s) 218, 1675, 1867
MspI CCGG 5 cut(s) 4546, 5698, 5774, 8276, 9591
MunI CAATTG 2 cut(s) 8676, 9022
Mva1269I GAATGC 7 cut(s) 501, 2172, 2869, 3066, 5392, 6746, 9704
MvnI CGCG 2 cut(s) 2091, 6262
NaeI GCCGGC 1 cut(s) 4547
NciI CCSGG 1 cut(s) 5699
NcoI CCATGG 3 cut(s) 2310, 6833, 8565
NdeI CATATG 1 cut(s) 4818
NgoMIV GCCGGC 1 cut(s) 4545
NheI GCTAGC 2 cut(s) 5168, 6556
NmuCI GTSAC 9 cut(s) 1749, 2838, 2972, 4207, 4892, 5563, 9115, 9593, 9685
NsiI ATGCAT 4 cut(s) 1720, 2146, 2300, 4278
NspI RCATGY 7 cut(s) 3850, 3969, 4495, 4900, 6805, 8293, 9303
NspV TTCGAA 2 cut(s) 34, 4776
PaeR7I CTCGAG 2 cut(s) 7824, 9632
PagI TCATGA 3 cut(s) 1528, 6760, 7411
PasI CCCWGGG 1 cut(s) 8376
PceI AGGCCT 2 cut(s) 1643, 9771
PciI ACATGT 4 cut(s) 3846, 4491, 4896, 6801
PciSI GCTCTTC 3 cut(s) 3571, 5160, 6733
PcsI WCGNNNNNNNCGW 1 cut(s) 4690
PctI GAATGC 7 cut(s) 501, 2172, 2869, 3066, 5392, 6746, 9704
PdiI GCCGGC 1 cut(s) 4547
PdmI GAANNNNTTC 6 cut(s) 40, 1805, 5678, 7216, 7524, 9179
PfoI TCCNGGA 3 cut(s) 504, 4863, 5882
Ple19I CGATCG 1 cut(s) 443
PmaCI CACGTG 1 cut(s) 6062
PmlI CACGTG 1 cut(s) 6062
Ppu21I YACGTR 2 cut(s) 3613, 6062
PpuMI RGGWCCY 2 cut(s) 75, 3275
PscI ACATGT 4 cut(s) 3846, 4491, 4896, 6801
PshAI GACNNNNGTC 1 cut(s) 1822
PshBI ATTAAT 2 cut(s) 590, 9504
PsiI TTATAA 2 cut(s) 4470, 9671
Psp124BI GAGCTC 5 cut(s) 2319, 4230, 6630, 7094, 8968
Psp1406I AACGTT 1 cut(s) 2525
Psp5II RGGWCCY 2 cut(s) 75, 3275
PspCI CACGTG 1 cut(s) 6062
PspEI GGTNACC 2 cut(s) 2681, 9593
PspFI CCCAGC 1 cut(s) 6974
PspPPI RGGWCCY 2 cut(s) 75, 3275
PspXI VCTCGAGB 1 cut(s) 9632
PstI CTGCAG 5 cut(s) 364, 1701, 6037, 6109, 9378
PstNI CAGNNNCTG 4 cut(s) 229, 281, 1826, 7820
PvuI CGATCG 1 cut(s) 443
PvuII CAGCTG 5 cut(s) 641, 2108, 6308, 8504, 8945
RsaI GTAC 9 cut(s) 433, 770, 1316, 2466, 2621, 5523, 8737, 9072, 9615
RsaNI GTAC 9 cut(s) 432, 769, 1315, 2465, 2620, 5522, 8736, 9071, 9614
RseI CAYNNNNRTG 7 cut(s) 324, 374, 3964, 6939, 8328, 9093, 9415
SacI GAGCTC 5 cut(s) 2319, 4230, 6630, 7094, 8968
SapI GCTCTTC 3 cut(s) 3571, 5160, 6733
SexAI ACCWGGT 2 cut(s) 5199, 8701
SfcI CTRYAG 7 cut(s) 303, 360, 780, 1697, 6033, 6105, 9374
Sfr274I CTCGAG 2 cut(s) 7824, 9632
SfuI TTCGAA 2 cut(s) 34, 4776
SlaI CTCGAG 2 cut(s) 7824, 9632
SmiI ATTTAAAT 1 cut(s) 738
SmiMI CAYNNNNRTG 7 cut(s) 324, 374, 3964, 6939, 8328, 9093, 9415
SpeI ACTAGT 1 cut(s) 7247
SseBI AGGCCT 2 cut(s) 1643, 9771
SspI AATATT 9 cut(s) 7, 311, 1116, 2230, 3529, 6085, 7576, 7736, 8521
SstI GAGCTC 5 cut(s) 2319, 4230, 6630, 7094, 8968
StuI AGGCCT 2 cut(s) 1643, 9771
SwaI ATTTAAAT 1 cut(s) 738
TaqII GACCGA 2 cut(s) 3499, 3752
TatI WGTACW 6 cut(s) 431, 768, 1314, 2619, 5521, 8735
TauI GCSGC 3 cut(s) 3875, 4395, 4748
TseFI GTSAC 9 cut(s) 1749, 2838, 2972, 4207, 4892, 5563, 9115, 9593, 9685
Tsp45I GTSAC 9 cut(s) 1749, 2838, 2972, 4207, 4892, 5563, 9115, 9593, 9685
TspGWI ACGGA 5 cut(s) 986, 5757, 8630, 9366, 9469
Vha464I CTTAAG 3 cut(s) 218, 1675, 1867
VneI GTGCAC 1 cut(s) 630
VspI ATTAAT 2 cut(s) 590, 9504
XagI CCTNNNNNAGG 2 cut(s) 2690, 4868
XceI RCATGY 7 cut(s) 3850, 3969, 4495, 4900, 6805, 8293, 9303
XcmI CCANNNNNNNNNTGG 2 cut(s) 5828, 6059
XhoI CTCGAG 2 cut(s) 7824, 9632
XmiI GTMKAC 2 cut(s) 302, 4460
XmnI GAANNNNTTC 6 cut(s) 40, 1805, 5678, 7216, 7524, 9179
ZraI GACGTC 1 cut(s) 6012
Zsp2I ATGCAT 4 cut(s) 1720, 2146, 2300, 4278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.