Rh7AG443400

BEACH domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
60205449 .. 60242502
37054 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG443400.1

Sequence Viewer

Length: 9390 bp
ATGGTTGTTGAATTAAATAGCAGTACAGTCCGATCAGCAGACTTCTGTGGCCATTCCACAATCTTAAATATCATTTCTGAAGGGATTCCACTCCTTGATGCTCTTCTGATTGTTAATCGTTCGCTGCAAAATTGCAGAGTTTTGGGATACTATGGTGGCATTCCAAAGCTAACGGCATTAATGAAAGGGGTTGTTGTCCAACTTAAAACAATAAGTTGCGCACTTTCAGCTGACGAAAAATTATCTAATTTTACCGTGGAGAAGACAGGACTCCTGCAACAAATACTTGTATATGTGGTGTCAATAATAAGTACTTTTATTGATTTGAATTCAAATGTAAATGAGAAATGTCAGTTGTATAGTAATACCATAGGCTTTGTCTTGGGGGGTGGTGCATCTCCTGTCGACTCTTCTAGTAGTTCAAATGCCCCCCCTAGTGAAATATTGTTACGTTGGCATCAGAGGGCAGTTGTGTCTGTGATGGAAGCTGGTGGACTTAATTGGTTAGTAGAGCTGCTGCGTGTGATCCGAAGCTTAAGCATGAAAGAACAGTGGACAGATACATCACTTCTGTATATGTCTTTGAGAATTCTTCATTCAACATTATCTCAAAACCCTCGTGGTCAAAATCTTTTTAAAAGCATTGGAGGACTTGAAGTTCTATTGGATGGTCTTGGAATACCATCAAATAATGGGCTAATATTGAAAAACTCTGCTTGTGCTGCTGACAAGAGATCTGAGAATCCCTTGATAAAAATCTTCCAGCTGCATGTTCTCTCCTTGGAAGTTCTCAAAGAGGCTGTCTTTGGGAATTTCAGCAACTTGCAATTTCTATGTGAAAATGGAAGGGTTCAGAAATTCGCAAATAGCTTTTGTTCCCCTGCTTTCACGTTTCACGAGTATAAACAACACACCAAGGGATTGTCTGGTCAGCAAGGTTCTCAAATGCCTGAAGTTGACTTTGGAACTGGCAATACTGTGAATAGCCGCATTGCAGAGGTTTCTGTTGCTCTTCCTGCCGATGGTTCTTACTCTCAAGTTTGGAATGATTATGTTCTTAAGTTGAGCGGAGTATTTTGTTCTTTCCTTCCCTCTTCAGAAGATATAAAATCTCATGATGTTGAACTGTCCACTGGTCGAATTACTGTGCCATTTTCTTCATCGTATGGTGAACTTTCAGTGGCATGGATCATAAGGGTTCTTCAAACAGTGTTCCCCTGCATTAAGGCCTGTTCAGATCAAAATGATTTAAAAAGCCACTTAAGGGTCTTTGTCACTGCGCTGCAGCACTCTGTATTAAATGCATTTAGGATGGTTCTTGATGCATCCCCTGTTTCACTCAAAGAATTTCGAAAAGAGGGAATCTGGGAGCTTATATTTTCTGAGAATTTTTTCTATTTTGGACCAGCTCCTGATGATCTTTCTGGAGAGTGCTGTACATGTATTGAGTCCCTGAGGAAAAATGGAATGCTTTCTTCTTCTAGTGACATCATCAGTCGAGCAAGAGTTTGTGGGATTGAAGTTCTCCAAATGGATGTGATTTCATTTTTGGAGTTTGCTGCAACTTCTAATGGGAGCCCAGACAATTCGCCTGAATTATCTGCTCTCGTAGAAGCCCTTGAACAGTGTGCTTGCAATCCTGATGTTTCTAGTGCACTTGCCAAGTGTTTGCTTCGCATATTAAAGCTTTCAGCTGAGAAAACTATTGCTTCGTTTAAAGCAGTTAATTCATTTCCTCGTGTGCTTAAGGTTGTTTGCATTCAATCCCAAGAGTCAAGAAGGTCTAGCAATATAATCCTTTCTGTTGAGAGTAATGTCAGTGAAGTGGTTCCATGTCAGCAGAAGAGATCTAAGTCACATGAGACAACGCAGAGATGGATCAAATGCATGGAAACATCCATGGAGCTTTATATGGAGTTTTTCTCTACAATAGAAGATGCTGGAAGTTTGGTTTTGCATAGCTCTGAATGTATTGGTCGGTTGTTTGATTTATTCTGGATAGAAGGTTTGAGAAATGAAGTGCTAAAGCATATTCTTGATCTCATGAAGATTGTACCATCATCTGAAGAAGATCAAAGAGCAAAGTTGCAGTTATGTTCTAAATACGTGGAAACATTCACTCAAATAAAGGACCGGGAAAGAAACTTTGTTGAGCTATCTATCAATTTACTAGCCGGAATGCAAGATATGCTCCAGATTGATCCTGTGTCCTATCAGACTTTGTTTCGTGAGGGAGAGTGCTTTTTGCACATTGTCTCTTTACTAAATGGTAACCTTGATGATGCTAATGGAGAGACTTTGGTTCTGGGTGTCCTTCAAACTCTTACCTGTTTGCTTGCAAGCAATGACACATCAAAGGCCACATTTAGAGGTCTTGCGGGCAAGGGGTACCAGACATTGCAAAGTCTATTGTTGGAGTTTTGCCAGTCTCGCTCAAGTGAAGGACTTTTGAATGCGCTGCTTGATATGCTTGTTGATGGAAAGTTTGATATGAAAGCAAGTCCTAAAATAAAGAATGAAGACGTGATCATACTTTATCTCAGCGTCCTGCAGAAGAGCAGTGACTCGTTGCAGCATAGTGGGCTTGATGTGTTTCAGCAATTAATGAGGGATTCCATTTCCAATCGAGCTTCTTGTGTCAGAGCAGGAATGCTCGATTTTCTACTTGATTGGTTTTCACAAGAAGGTAATGATAGTGTCATCTTGAAAATTGCCCAATTAATTCAAGTTGTTGGTGGGCATAGCACATCTGGGAAGGACATTCGCAAAATCTTTGCCCTCCTTCGAAGTGAGAAAATTGGGAATCAGCACAAGTATTGCTCACTGTTGTTGTCCAGTGTTTTGTCAATGCTAAAGGAAAAGGGACCTACTGCCTTTTTTGACCTCAATGGGAATGATTCTGGGATCGTGATTAAAACACCTGTTCAGTGGCCACTCAACAAGGGATTTTCTTTTTCATGTTGGTTGAGGGTAGAGAATTTCCCCAGAAGTGGGACAATGGGTCTTTTCAGTTTCCTTACAGAAAATGGAAGAGGGTGCATGGCGGCACTAGCAAAGGACAAGCTTCTGTATGAGTCCATCAATCTGAAGCGACACTCTGTCCAGCTGCAGCTAAAAATTGTCACAAAGAAATGGCATTTGCTATGTATAACTCATAGCATAGGAAGAGCTTTTTCAGGGGGTAGCTTATTGAGGTGTTACGTTGATGGTGATCTTGTTTCTTCTGAAAGATGCAGTTATGCGAAAGTTAATGACTTGCTAACAAGATGTACAGTTGGCGCCAAATTTGACGGGCCCCTGTCTGATGATGATTTATCTTCGAAATCCTTAAGGGATTCGCATCCTTTTCTTGGTCAGGTTGGTCCAGTTTATCTGTTCAATGATGCCATTTCTTCTGAGCAAGTTCAGGGCATCTGTTCTCTTGGACCAAGCTACATGTATTCGTTCCTTGACAATGAAGCTTCATCATCTAATGAAACTAAGCTCGGAGGGGTTCTTGATGTCAAAGATGGTCTTGCATCGAAAATTATTTTTGGACTTAATGCTCAGGCAAGTAATGGCAGGACACTATTTAATGTTTCACCAATGCTGGATCATGCATCAGATAGGAACTCATTTGAAGCAACCATGATGGTTGGCACGCAGCAATGCTCGAGACGCTTACTGCAACAGATAATTTACTGTGTGGGAGGGGTATCAGTTTTCTTCCCTCTTATTGCCCAGTCTGAAAAATATGAAAATGAAGAAAGTGGGCAATTTAAAGATACGTTTCCTATACCTATAACTAGAGATCGGGTGACTGCTGAAGTCATTGAGCTAATCGCTTCTGTGCTTGATGAGAATGTAGCTAATCAACAACAGATGCATCTTCTCTCTGGGTTCTCAATACTGGGATTCTTGTTGCAGTCAGTTCCTCCTCAGCAACTTAATTTGGAAACACTTTCATCTCTAAAACATTTCTATCATATCGTTGCAAACTGTGGCTTGGCTGAACTGCTTACCAAAGAGGCTATATCTAGCATATTTCTTAACCCTCTCATCTGGCTGTACACGGATTATAAGGTGCAGCGAGAATTATACATGTTTGTCATCTGGCAGTTTGATAATGATCCAAGGATGCTTAAAAGCCTTTGCCGGCTCCCCCGTGTTATTGATATAATACGCCAATTCTATTGGGATAATCCAAAATCTCGATTTGCTATTGGAAACATGCCTCTCATTCATCCCATCACAAAACAAGTTCTTGGAGAGAGACCTAGTAATGACGAAATACATAAAATTCGTCTTCTTTTGTTGAGCCTTGGTGAATTGAGCCTTAGGCAGAACATTGCAGGGGCAGATATAAGAGCTCTAATAGCTTTCTTTGAGACAAGTCAGGATATGACCTGCATTGAAGATGTTCTACATATGGTTATTCGAGCAATTTCTCAAAAGCCACTGCTTGCAGATTTCCTTGAACAGGTCAATTTGATTGGTGGCTGTCACATATTTGCCAATCTTCTTCAGAGAGAACATGAACCTATCAGATTACTTAGCTTGCAGCTCCTTGGAAGGCTTTTAGTTGATCTCCCATCTGAGAAAAAGGGAGCAAGATTTTTCAATCTTGCAGTCGGAAGGTCCCGATCTCTTTTTGACGGCCATAAAAAAATCTCAAAGCAACCAATTTTTTCAGCCATGTCTGATAGATTATTTAGGTTTCCACAAACAGATAACTTGTGTGCCACTCTGTTTGATGTTCTTCTTGGTGGTGCTAGCCCTAAACAGGTATTACAGAAGCACAACCTGGCTGAGAAGCAGAGAAGCAAAGGACATATGTCACATTTTCTCCTTCCTCAAATTTTGGTTCTTATATTTAGATTCCTGTCTGACTGTGAGGATGCGGCTTCAAGAATGAAAATTATCAGAGATTTACTTGATCTTCTTGATTCGGATCCTTCAAATGTCGAAGCTTTTATGGATTTTGGATGGAATGCCTGGTTAACAGCTTGTGTGAAGCTCGGTGTGTTCAAAGACTACAAAGTTACTCCAGAAGATCAAGATCACGATGAGAAAACAGAACAAGATTTAGTGCGGAATATATTTTGTGTTGTTCTTTGTTACTATGTTCATTCTGTGAAAGGTGGGTGGCACCAGTTAGAAGAGACGGTAACTTTCCTGCTAATGCAGTGTGAACATGGTGGAGTTTCATTTCGGTACTTGCTTCGTGACATATATAAGGATCTGATCAGGGGATTGTTGGAATTGTCTTCTGAAGAGAGTATTTTTGTGTCGCAACCGAGCCGGGACAACACATTATACCTTCTAAGACTGATCGATGAGATGCTCATTTCTGAAATGGACCAAAACCTTCCGTTCCCAGCAAGCACTACAGATTTCTCTCTTGATTCGTTAGAGTTAGAACGCCATAAAGATTATGGTTCTGCCTTGTTTGAAGTGCTGCATGGAGAAAATGACAGCCAAATATCGAGGACTTCTGGGAGTTGCAAGCAGCCTGTCAAAAGTGAAGATGGCATTGTCAGTGACAAGTGGTGGGATCTGTATGACAGTTTGTGGATTATTATTAGTGAGATGAATGGTAAGGGACCGAGCAAGTCGCTATCGAAATCATCACCAACTGCAGTTCCATCTTTTGGTCAGAGAGCACGTGGCTTAGTAGAATCGTTGAACATTCCTGCTGCAGAGGTGGCTGCAGTTGTTGTATCAGGAGGGATAGGCAGTGCATTAGGTGGCAAACCAAACAAAAATGTTGATAAGGCAATGCTCTTACGAGGAGAGAGGTGTCCAAGAATTATTTTTCGACTTGTAATCCTATATCTCTGTAGATCTTCTTTAGAAAGAGCATCGCGATGCGTCCAACTGGTCATTCCACTTCTGCCATTTCTCTTATCAGCTGATGACGAGCAAAGTAAAAGCAGATTGCAGCTGTTCATCTGGGCATTGCTTGTTGTTAGGTCGCAGTTTGGAATGCTAGATGACGGTGCTCGTTTTCATGTTATATCGCACTTGATTCGAGAAACTATCAGCTTTGGTAAATCAATGCTTGCTAGTAGCATTATGGGTAGGGAGGATTCCTTGGATTCAGGCAGCAATGTAAAAGAAACCGGATCCATTCACAATCTGATTCAGCGAGATCGAGTACTTGCAGCAGTTGCAGAGGAGGTAAAATATATAAAGTCATTAGATGCTGATCGCCAAAGGCAGCTGCATGAACTCCACTCCAGGATGGATGAAAATGCCTCTGCAGAATCAAATGATAGAAAGGCTTTTGAAGATGAGATACAAAGTAGCTTAACCTCCATTCTTGCTTTGGATGACAGCAGAAGAGCTGCATTCCAGCTAACTCACGAGGAGGAGCAGCAAAATGTTGCTGAGAAATGGATACACATGTTTCGTGCTTTGATTGATGAGAGAGGTCCATGGTCTGCGAACCCTTTTCCAAATAGTGCTGTAAGGCATTGGAAACTTGAGAAGATAGAAGATACCTGGCGACGGAGACCAAAACTGAGACAGAATTATCATTTTGATGAAAAGTTGTGCCAACCTTCATCCTCTGTCTCCAGCATTGAGATTACACCTCCTTTTAATGAAAGTAAATCTGCTTTTGTTGGCCACATTCCTGAGCAAATGAAGCGGTTTTTGCTAAAAGGAGTATGGAAGATTACTGATGAGGGGAGCTCAGAACCCAATGAAACTGATACCGAGCTCAGTGGACAGAAGCCGTCCATCCACACAGATACCTCAGACAGCCAGACCTCAGAATTAGCAAAGGACACCAGTGATTGGATACAGGAGAGGAAAGATTCGTCTTCCCCTTCACATGAGACAGAAACTAGTGAGGTTCTTACATCAGTTCCTTGTGTACTTGTATCCCCAAAAAGAAAATTAGCTGGACATTTGGCGGTCATGAAAAACGTCTTGCATTTCTTTGGAGAATTTTTGGTTGAAGGTACTGGAGGATCATCCATTTTCAGAAACTTCCCTGCTTCAAGCAATTTTGATTTGACCAAACCTGATCAAAAGCAGAAATTTATAAAACAACCAATATGCTTTGGTTTGGATGCATCGAAGGGCACCATGGTTCAGAAATTTGAGGCAATAGGTGAAAATGTTCTCAAAAGAAAGGAGCTAAAAAATATTAAACGCCACAGGAGGTGGAACATGGGCAAGATCAAATCTGTTTGTTGGACGCGTTATTTGCTTCGGTATACTGCAATAGAGATTTTCTTCTGTGATTCATCTGCACCGATATTTTTGAATTTTGCATCACAGAAGGATGCAAAAGATATTGGAACCTTAATAGTTGCTACGAGGAACGAATATTTGTTTCCAAAAGGAAGTGGTAGGGATAAAAGTGGAGCTATTTCATTTGTTGATAGACGTGTATCCTTGGAAATGGCAGAAGCTGCCCGAGAGAGCTGGAGGAGAAGGGATATGACAAATTTTGAATATCTAATGATCCTTAATACGCTGGCTGGAAGGTCTTATAATGATTTGACACAATATCCTGTGTTTCCTTGGGTCTTGGCTGATTATTCCTCGGAGGTTCTTGATTTCAACAAGTCTTCAACCTTTCGGGATCTTTCAAAACCAGTTGGAGCACTTGATTTAAAACGATTTGAGGTGTTTGAAGATAGATATCGTAGCTTTACTGATCCTGATATACCTAGTTTCTACTATGGGTCTCATTATTCAAGCATGGGGATAGTGCTTTATTACCTTCTCAGATTAGAGCCATTTACTTCTCTCCATCGCAATTTGCAGGGTGGTAAATTTGACCATGCAGATCGTCTCTTTCAAAGCATTGAGTCAACTTATCAGAACTGCCTTTCTAATACAAGTGATGTGAAAGAGTTAATACCTGAGTTCTTTTATATGCCAGAGTTTCTTGTGAATTCAAACTCCTATCATTTAGGGGTGAAACAAGATGGTGAACCTATTGGAGATGTTTGTCTCCCTCCCTGGGCCAAGGGCTCACCTGAAGAATTTGTTAACAAGAACAGAGAGGCCCTTGAAAGTGAATATGTTAGCTCTAATCTACACCATTGGATAGATTTAGTATTTGGTTACAAACAGCGTGGAAAACCTGCTGTGGAGGCAGCAAATATTTTTTATTACTTGACCTATGAAGGCGCTGTTGATCTGGACACCATGGAAGACGATTTACAAAGATCAGCAATTGAAGACCAAATTGCAAATTTTGGACAAACACCAATTCAGATTTTCCGTAAAAAACACCCAAGAAGAGGACCACCCATTCCAATTGCTCATCCTCTGCGCTTTGCACCTAGTTCTATTAACATGACTTCCATTGTTAGTAGTGCAAGTCAACCAAGGTCGTCTTCATTGTATATTCGTACAGTGGACTCAAATATTGTTGTTGTAAACCAGGGGCTCACCTTGTCAGTTAAGATGTGGTTGACATCCTCACTGCAATCTGGTGGAAATTTTACCTTCTCTGGCTCCCAGGATCCTTCTTTTGGCATTGGTTCTGATGTCCTTTCTCCGCGTAAAATTGGGAGTCCTTCTGCTGAAAATGTTGAACTTGGACCACAATGCTTCGCAACAATGCAAACAGCATCGGAGAATTTTTTGATCTCATGTGGCAATTGGGAAAATAGCTTTCAGGTTATATCCTTGAATGATGGCAGAGTGGTGCAAAGCATCAGGCAGCATAGGGATGTGGTCAGTTGTGTTGCAGTAACATCTGATGGACGCTTCCTTGCAACTGGAAGTTATGACACTACAATCATGGTCTGGGAAGTTTTCCGAGGTAGAACACAAGAAAAGAGACCACGTAATACACAGACGGAACTACCCCGTAAAGATTATGTCATTGTTGAAACTCCTTTTCGTATTCTGTGCGGACACGATGATATAATTACATGCTTATATATCAGCGTAGAGCTTGACATAGTTATCAGTGGATCGAAAGATGGAACATGTGTTTTTCATACCCTGCAGAAGGGAAGATATGTAAGATCCGTGCGACATCCATCTGGATGTGCGTTATCAAAGCTTGTTGCCTCTCGGCATGGAAGGATAGTGTTTTACGCAGATGATGATCTCAGTTTGCATCTTTATTCAATTAATGGTAAACATCTTGCTTCTTCTGAATCCAATGGCCGCCTCAACTGTGTTGAGCTGAGTGGGTGTGAGGAATTTTTGGTTTGTGCTGGTGACCACGGGCAAATAGTTGTACGCTCCATGAATTCACTTGAGGTCATAAAGAAATATAATGGAGCTGGAAAGATCATAACATCTCTAACAGTGACCCCAGAAGAATGCTTCTTAGCTGGAACAAAAGACGGAGCCCTTCTTGTGTATTCTATAGAAAATCCTCAACATCGCAAAGGTGCCCTTCCTCGAAATTCAAAATCCAAACCCTCTTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

3129

Amino Acids

350.28

Weight (kDa)

6.28

Isoelectric Point (pI)

45.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Neurobeachin PF20425 529 - 951 8.3e-213 Neurobeachin alpha solenoid region
Laminin_G_3 PF13385 963 - 1136 2.6e-08 Concanavalin A-like lectin/glucanases superfamily
DUF4704 PF15787 1202 - 1720 1.2e-159 Neurobeachin/BDCP, DUF4704 alpha solenoid region
DUF4800 PF16057 2071 - 2177 8.9e-07 Domain of unknown function (DUF4800)
PH_BEACH PF14844 2372 - 2431 1.8e-10 PH domain associated with Beige/BEACH
Beach PF02138 2472 - 2748 5.1e-124 Beige/BEACH domain
NBCH_WD40 PF20426 2769 - 3117 2e-204 Neurobeachin beta propeller domain
WD40_Prp19 PF24814 2856 - 3033 1.5e-11 Prp19 WD40 domain
Beta-prop_EML_2 PF23414 2856 - 2994 3e-06 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR3_1st PF25173 2857 - 2925 9e-08 WDR3 first beta-propeller domain
Beta-prop_TEP1_2nd PF25047 2857 - 3036 4e-08 TEP-1 second beta-propeller
Beta-prop_WDR5 PF25175 2860 - 2926 5.5e-08 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 2862 - 2921 7e-08 THOC3 beta-propeller domain
WD40 PF00400 2883 - 2919 1.2e-07 WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1 PF24105 2883 - 3035 2.8e-07 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR5 PF25175 2950 - 3099 3.4e-07 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 2953 - 3111 1.5e-07 THOC3 beta-propeller domain
WDR55 PF24796 2956 - 3111 2.9e-06 WDR55
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 4059, 7031, 7485
Acc16I TGCGCA 1 cut(s) 220
Acc36I ACCTGC 2 cut(s) 4394, 8092
Acc65I GGTACC 1 cut(s) 2388
AccB1I GGYRCC 5 cut(s) 2388, 3278, 5127, 7070, 9353
AccB7I CCANNNNNTGG 2 cut(s) 5630, 6780
AccBSI CCGCTC 1 cut(s) 1068
AccI GTMKAC 2 cut(s) 405, 7205
AccII CGCG 3 cut(s) 5845, 7189, 8506
AcoI YGGCCR 5 cut(s) 49, 2930, 4636, 6607, 9121
AcuI CTGAAG 9 cut(s) 99, 972, 1080, 2085, 3107, 3825, 4487, 5271, 7998
AcvI CACGTG 1 cut(s) 5645
AcyI GRCGYC 1 cut(s) 3279
AflII CTTAAG 5 cut(s) 535, 1058, 1261, 1745, 3328
AflIII ACRYGT 7 cut(s) 1439, 3435, 4080, 6384, 7187, 7378, 8939
AhdI GACNNNNNGTC 2 cut(s) 3000, 3098
AhlI ACTAGT 1 cut(s) 6830
AjiI CACGTC 2 cut(s) 2524, 7379
AjnI CCWGG 7 cut(s) 4782, 4973, 6218, 6482, 7958, 8385, 8463
AjuI GAANNNNNNNTTGG 6 cut(s) 945, 977, 5847, 5879, 8323, 8355
AloI GAACNNNNNNTCC 2 cut(s) 642, 674
Alw21I GWGCWC 7 cut(s) 1657, 4351, 5644, 5983, 6677, 6705, 7600
Alw44I GTGCAC 1 cut(s) 1653
AlwNI CAGNNNCTG 2 cut(s) 1412, 7403
Ama87I CYCGRG 2 cut(s) 3652, 7407
ApaI GGGCCC 1 cut(s) 3297
ApaLI GTGCAC 1 cut(s) 1653
ArsI GACNNNNNNTTYG 4 cut(s) 786, 818, 7177, 7209
AseI ATTAAT 4 cut(s) 179, 2603, 2720, 9087
Asp700I GAANNNNTTC 6 cut(s) 84, 1391, 1471, 1827, 4398, 7107
Asp718I GGTACC 1 cut(s) 2388
AspLEI GCGC 6 cut(s) 221, 1282, 2458, 3281, 8132, 8277
AsuC2I CCSGG 2 cut(s) 2135, 5282
AsuII TTCGAA 3 cut(s) 1351, 2785, 3320
AsuNHI GCTAGC 1 cut(s) 4751
AvaI CYCGRG 2 cut(s) 3652, 7407
AxyI CCTNAGG 2 cut(s) 1454, 4316
BaeGI GKGCMC 4 cut(s) 1657, 3297, 7073, 9358
BaeI ACNNNNGTAYC 4 cut(s) 139, 172, 6371, 6404
BalI TGGCCA 3 cut(s) 51, 2932, 6609
BamHI GGATCC 3 cut(s) 4930, 6104, 8467
BanI GGYRCC 5 cut(s) 2388, 3278, 5127, 7070, 9353
BanII GRGCYC 8 cut(s) 1580, 3297, 4351, 6677, 6705, 7973, 8394, 9313
BarI GAAGNNNNNNTAC 6 cut(s) 4386, 4418, 6261, 6293, 8145, 8177
BauI CACGAG 4 cut(s) 618, 896, 1737, 6344
BbrPI CACGTG 1 cut(s) 5645
BbsI GAAGAC 9 cut(s) 269, 2526, 4277, 5238, 6798, 7554, 8160, 8187, 8331
Bbv12I GWGCWC 7 cut(s) 1657, 4351, 5644, 5983, 6677, 6705, 7600
BbvCI CCTCAGC 1 cut(s) 3918
BceAI ACGGC 3 cut(s) 189, 4651, 6703
BcgI CGANNNNNNTGC 2 cut(s) 5990, 6024
BciT130I CCWGG 7 cut(s) 4784, 4975, 6220, 6484, 7960, 8387, 8465
BciVI GTATCC 5 cut(s) 140, 6372, 6777, 6877, 7393
BclI TGATCA 3 cut(s) 2526, 5223, 7012
BcnI CCSGG 2 cut(s) 2135, 5282
BcuI ACTAGT 1 cut(s) 6830
BfoI RGCGCY 2 cut(s) 3282, 8133
BfrI CTTAAG 5 cut(s) 535, 1058, 1261, 1745, 3328
BfuAI ACCTGC 2 cut(s) 4394, 8092
BfuI GTATCC 5 cut(s) 140, 6372, 6777, 6877, 7393
BglII AGATCT 3 cut(s) 734, 1847, 5822
BmcAI AGTACT 2 cut(s) 313, 6138
Bme1390I CCNGG 9 cut(s) 2135, 4784, 4975, 5282, 6220, 6484, 7960, 8387, 8465
BmeRI GACNNNNNGTC 2 cut(s) 3000, 3098
BmeT110I CYCGRG 2 cut(s) 3652, 7407
BmgBI CACGTC 2 cut(s) 2524, 7379
BmrFI CCNGG 9 cut(s) 2135, 4784, 4975, 5282, 6220, 6484, 7960, 8387, 8465
BmrI ACTGGG 2 cut(s) 3715, 3899
BmtI GCTAGC 1 cut(s) 4755
BmuI ACTGGG 2 cut(s) 3715, 3899
BoxI GACNNNNGTC 1 cut(s) 4813
BpiI GAAGAC 9 cut(s) 269, 2526, 4277, 5238, 6798, 7554, 8160, 8187, 8331
BplI GAGNNNNNCTC 4 cut(s) 1907, 1939, 6659, 6691
BpmI CTGGAG 7 cut(s) 1446, 2177, 5010, 6202, 6541, 6972, 7438
Bpu10I CCTNAGC 3 cut(s) 3546, 3918, 6618
Bpu14I TTCGAA 3 cut(s) 1351, 2785, 3320
BpuEI CTTGAG 4 cut(s) 1020, 2419, 6485, 9236
BpuMI CCSGG 2 cut(s) 2135, 5282
Bsa29I ATCGAT 1 cut(s) 5313
BsaAI YACGTR 3 cut(s) 2107, 5645, 8795
BsaBI GATNNNNATC 9 cut(s) 755, 3210, 3339, 4107, 4929, 5037, 6186, 7635, 9060
BsaHI GRCGYC 1 cut(s) 3279
BsaI GGTCTC 4 cut(s) 4246, 6487, 7686, 8782
BsaWI WCCGGW 1 cut(s) 6101
BsaXI ACNNNNNCTCC 2 cut(s) 4809, 4839
Bse118I RCCGGY 1 cut(s) 4134
Bse21I CCTNAGG 2 cut(s) 1454, 4316
Bse3DI GCAATG 8 cut(s) 990, 2350, 2396, 3653, 4326, 5763, 5936, 6094
Bse8I GATNNNNATC 9 cut(s) 755, 3210, 3339, 4107, 4929, 5037, 6186, 7635, 9060
BseBI CCWGG 7 cut(s) 4784, 4975, 6220, 6484, 7960, 8387, 8465
BseCI ATCGAT 1 cut(s) 5313
BseJI GATNNNNATC 9 cut(s) 755, 3210, 3339, 4107, 4929, 5037, 6186, 7635, 9060
BseMI GCAATG 8 cut(s) 990, 2350, 2396, 3653, 4326, 5763, 5936, 6094
BseRI GAGGAG 6 cut(s) 3906, 5784, 6170, 6362, 6365, 7435
BseSI GKGCMC 4 cut(s) 1657, 3297, 7073, 9358
BseYI CCCAGC 1 cut(s) 5356
BsgI GTGCAG 2 cut(s) 4085, 7224
Bsh1236I CGCG 3 cut(s) 5845, 7189, 8506
BshNI GGYRCC 5 cut(s) 2388, 3278, 5127, 7070, 9353
BshVI ATCGAT 1 cut(s) 5313
BsiHKAI GWGCWC 7 cut(s) 1657, 4351, 5644, 5983, 6677, 6705, 7600
BsiHKCI CYCGRG 2 cut(s) 3652, 7407
BsiSI CCGG 5 cut(s) 2134, 2175, 4135, 5281, 6102
BslFI GGGAC 6 cut(s) 1435, 2877, 3007, 4603, 5297, 5595
BsmBI CGTCTC 3 cut(s) 3649, 5135, 7793
BsmFI GGGAC 6 cut(s) 1435, 2877, 3007, 4603, 5297, 5595
Bso31I GGTCTC 4 cut(s) 4246, 6487, 7686, 8782
BsoBI CYCGRG 2 cut(s) 3652, 7407
Bsp119I TTCGAA 3 cut(s) 1351, 2785, 3320
Bsp120I GGGCCC 1 cut(s) 3293
Bsp1407I TGTACA 3 cut(s) 1436, 3269, 4047
Bsp19I CCATGG 4 cut(s) 1899, 6416, 7074, 8148
Bsp68I TCGCGA 1 cut(s) 5845
BspDI ATCGAT 1 cut(s) 5313
BspFNI CGCG 3 cut(s) 5845, 7189, 8506
BspHI TCATGA 3 cut(s) 1114, 2043, 6903
BspMAI CTGCAG 8 cut(s) 1287, 2553, 3111, 5620, 5680, 5692, 6244, 8961
BspMI ACCTGC 2 cut(s) 4394, 8092
BspOI GCTAGC 1 cut(s) 4755
BspQI GCTCTTC 5 cut(s) 108, 1017, 2549, 3160, 6316
BspT104I TTCGAA 3 cut(s) 1351, 2785, 3320
BspT107I GGYRCC 5 cut(s) 2388, 3278, 5127, 7070, 9353
BspTI CTTAAG 5 cut(s) 535, 1058, 1261, 1745, 3328
BspTNI GGTCTC 4 cut(s) 4246, 6487, 7686, 8782
BsrBI CCGCTC 1 cut(s) 1068
BsrDI GCAATG 8 cut(s) 990, 2350, 2396, 3653, 4326, 5763, 5936, 6094
BsrFI RCCGGY 1 cut(s) 4134
BsrGI TGTACA 3 cut(s) 1436, 3269, 4047
BssAI RCCGGY 1 cut(s) 4134
BssNAI GTATAC 1 cut(s) 7206
BssNI GRCGYC 1 cut(s) 3279
BssSI CACGAG 4 cut(s) 618, 896, 1737, 6344
Bst1107I GTATAC 1 cut(s) 7206
Bst2BI CACGAG 4 cut(s) 618, 896, 1737, 6344
Bst2UI CCWGG 7 cut(s) 4784, 4975, 6220, 6484, 7960, 8387, 8465
BstACI GRCGYC 1 cut(s) 3279
BstAFI CTTAAG 5 cut(s) 535, 1058, 1261, 1745, 3328
BstAPI GCANNNNNTGC 3 cut(s) 2188, 6149, 7403
BstAUI TGTACA 3 cut(s) 1436, 3269, 4047
BstBAI YACGTR 3 cut(s) 2107, 5645, 8795
BstBI TTCGAA 3 cut(s) 1351, 2785, 3320
BstDSI CCRYGG 6 cut(s) 255, 1899, 6416, 7074, 8148, 9181
BstEII GGTNACC 2 cut(s) 2270, 9176
BstENI CCTNNNNNAGG 2 cut(s) 4457, 8960
BstFNI CGCG 3 cut(s) 5845, 7189, 8506
BstH2I RGCGCY 2 cut(s) 3282, 8133
BstHHI GCGC 6 cut(s) 221, 1282, 2458, 3281, 8132, 8277
BstNI CCWGG 7 cut(s) 4784, 4975, 6220, 6484, 7960, 8387, 8465
BstNSI RCATGY 8 cut(s) 773, 1443, 3439, 4084, 4213, 6388, 8886, 8943
BstPAI GACNNNNGTC 1 cut(s) 4813
BstPI GGTNACC 2 cut(s) 2270, 9176
BstSCI CCNGG 9 cut(s) 2133, 4782, 4973, 5280, 6218, 6482, 7958, 8385, 8463
BstSLI GKGCMC 4 cut(s) 1657, 3297, 7073, 9358
BstUI CGCG 3 cut(s) 5845, 7189, 8506
BstV2I GAAGAC 9 cut(s) 269, 2526, 4277, 5238, 6798, 7554, 8160, 8187, 8331
BstZ17I GTATAC 1 cut(s) 7206
Bsu15I ATCGAT 1 cut(s) 5313
Bsu36I CCTNAGG 2 cut(s) 1454, 4316
BsuI GTATCC 5 cut(s) 140, 6372, 6777, 6877, 7393
BsuTUI ATCGAT 1 cut(s) 5313
BtgI CCRYGG 6 cut(s) 255, 1899, 6416, 7074, 8148, 9181
BtgZI GCGATG 4 cut(s) 5826, 5860, 7733, 9329
BtrI CACGTC 2 cut(s) 2524, 7379
BtsI GCAGTG 6 cut(s) 1275, 2566, 4436, 5171, 5722, 8426
BtuMI TCGCGA 1 cut(s) 5845
BveI ACCTGC 2 cut(s) 4394, 8092
CaiI CAGNNNCTG 2 cut(s) 1412, 7403
CciI TCATGA 3 cut(s) 1114, 2043, 6903
CfoI GCGC 6 cut(s) 221, 1282, 2458, 3281, 8132, 8277
Cfr10I RCCGGY 1 cut(s) 4134
ClaI ATCGAT 1 cut(s) 5313
CseI GACGC 5 cut(s) 2533, 3666, 5839, 7195, 8721
CspCI CAANNNNNGTGG 4 cut(s) 4711, 4746, 8056, 8091
DinI GGCGCC 1 cut(s) 3280
DraI TTTAAA 5 cut(s) 637, 1251, 1717, 3760, 7608
DriI GACNNNNNGTC 2 cut(s) 3000, 3098
EaeI YGGCCR 5 cut(s) 49, 2930, 4636, 6607, 9121
Eam1105I GACNNNNNGTC 2 cut(s) 3000, 3098
Ecl136II GAGCTC 3 cut(s) 4349, 6675, 6703
Eco147I AGGCCT 1 cut(s) 1229
Eco24I GRGCYC 8 cut(s) 1580, 3297, 4351, 6677, 6705, 7973, 8394, 9313
Eco31I GGTCTC 4 cut(s) 4246, 6487, 7686, 8782
Eco32I GATATC 1 cut(s) 7637
Eco53kI GAGCTC 3 cut(s) 4349, 6675, 6703
Eco57I CTGAAG 9 cut(s) 99, 972, 1080, 2085, 3107, 3825, 4487, 5271, 7998
Eco72I CACGTG 1 cut(s) 5645
Eco81I CCTNAGG 2 cut(s) 1454, 4316
Eco88I CYCGRG 2 cut(s) 3652, 7407
Eco91I GGTNACC 2 cut(s) 2270, 9176
EcoICRI GAGCTC 3 cut(s) 4349, 6675, 6703
EcoNI CCTNNNNNAGG 2 cut(s) 4457, 8960
EcoO109I RGGNCCY 4 cut(s) 2864, 3294, 4617, 8005
EcoO65I GGTNACC 2 cut(s) 2270, 9176
EcoRI GAATTC 4 cut(s) 328, 588, 7891, 9208
EcoRII CCWGG 7 cut(s) 4782, 4973, 6218, 6482, 7958, 8385, 8463
EcoRV GATATC 1 cut(s) 7637
EcoT22I ATGCAT 6 cut(s) 1306, 1327, 1889, 3601, 3867, 7063
EcoT38I GRGCYC 8 cut(s) 1580, 3297, 4351, 6677, 6705, 7973, 8394, 9313
EgeI GGCGCC 1 cut(s) 3280
EheI GGCGCC 1 cut(s) 3280
Esp3I CGTCTC 3 cut(s) 3649, 5135, 7793
FalI AAGNNNNNCTT 6 cut(s) 3498, 3530, 8323, 8355, 9342, 9374
FaqI GGGAC 6 cut(s) 1435, 2877, 3007, 4603, 5297, 5595
FauI CCCGC 1 cut(s) 2371
FauNDI CATATG 2 cut(s) 4407, 4812
FbaI TGATCA 3 cut(s) 2526, 5223, 7012
FblI GTMKAC 2 cut(s) 405, 7205
FriOI GRGCYC 8 cut(s) 1580, 3297, 4351, 6677, 6705, 7973, 8394, 9313
FspI TGCGCA 1 cut(s) 220
GlaI GCGC 6 cut(s) 220, 1281, 2457, 3280, 8131, 8276
GsaI CCCAGC 1 cut(s) 5360
GsuI CTGGAG 7 cut(s) 1446, 2177, 5010, 6202, 6541, 6972, 7438
HaeII RGCGCY 2 cut(s) 3282, 8133
HapII CCGG 5 cut(s) 2134, 2175, 4135, 5281, 6102
HgaI GACGC 5 cut(s) 2533, 3666, 5839, 7195, 8721
HhaI GCGC 6 cut(s) 221, 1282, 2458, 3281, 8132, 8277
Hin1I GRCGYC 1 cut(s) 3279
Hin6I GCGC 6 cut(s) 219, 1280, 2456, 3279, 8130, 8275
HinP1I GCGC 6 cut(s) 219, 1280, 2456, 3279, 8130, 8275
HincII GTYRAC 7 cut(s) 406, 958, 4980, 7809, 7990, 8327, 8418
HindII GTYRAC 7 cut(s) 406, 958, 4980, 7809, 7990, 8327, 8418
HindIII AAGCTT 6 cut(s) 532, 1685, 3062, 3459, 4947, 9014
HpaI GTTAAC 2 cut(s) 4980, 7990
HpaII CCGG 5 cut(s) 2134, 2175, 4135, 5281, 6102
Hpy99I CGWCG 1 cut(s) 6492
Hsp92I GRCGYC 1 cut(s) 3279
HspAI GCGC 6 cut(s) 219, 1280, 2456, 3279, 8130, 8275
KasI GGCGCC 1 cut(s) 3278
KpnI GGTACC 1 cut(s) 2392
KroI GCCGGC 1 cut(s) 4134
KroNI GCCGGC 1 cut(s) 4136
Ksp22I TGATCA 3 cut(s) 2526, 5223, 7012
KspAI GTTAAC 2 cut(s) 4980, 7990
LguI GCTCTTC 5 cut(s) 108, 1017, 2549, 3160, 6316
MbiI CCGCTC 1 cut(s) 1068
MfeI CAATTG 3 cut(s) 8175, 8259, 8605
MlsI TGGCCA 3 cut(s) 51, 2932, 6609
MluI ACGCGT 1 cut(s) 7187
MluNI TGGCCA 3 cut(s) 51, 2932, 6609
Mly113I GGCGCC 1 cut(s) 3279
MlyI GAGTC 9 cut(s) 264, 401, 1457, 1781, 2558, 3083, 7814, 8357, 8527
MmeI TCCRAC 7 cut(s) 223, 2394, 4591, 5217, 5878, 7163, 7573
Mox20I TGGCCA 3 cut(s) 51, 2932, 6609
Mph1103I ATGCAT 6 cut(s) 1306, 1327, 1889, 3601, 3867, 7063
MroNI GCCGGC 1 cut(s) 4134
MroXI GAANNNNTTC 6 cut(s) 84, 1391, 1471, 1827, 4398, 7107
MscI TGGCCA 3 cut(s) 51, 2932, 6609
MslI CAYNNNNRTG 4 cut(s) 5845, 6522, 8676, 8998
Msp20I TGGCCA 3 cut(s) 51, 2932, 6609
MspA1I CMGCKG 7 cut(s) 230, 766, 1694, 3106, 5891, 5923, 6202
MspCI CTTAAG 5 cut(s) 535, 1058, 1261, 1745, 3328
MspI CCGG 5 cut(s) 2134, 2175, 4135, 5281, 6102
MspR9I CCNGG 9 cut(s) 2135, 4784, 4975, 5282, 6220, 6484, 7960, 8387, 8465
MunI CAATTG 3 cut(s) 8175, 8259, 8605
MvaI CCWGG 7 cut(s) 4784, 4975, 6220, 6484, 7960, 8387, 8465
MvnI CGCG 3 cut(s) 5845, 7189, 8506
NaeI GCCGGC 1 cut(s) 4136
NarI GGCGCC 1 cut(s) 3279
NciI CCSGG 2 cut(s) 2135, 5282
NcoI CCATGG 4 cut(s) 1899, 6416, 7074, 8148
NdeI CATATG 2 cut(s) 4407, 4812
NgoMIV GCCGGC 1 cut(s) 4134
NheI GCTAGC 1 cut(s) 4751
NmeAIII GCCGAG 1 cut(s) 9007
NruI TCGCGA 1 cut(s) 5845
NsbI TGCGCA 1 cut(s) 220
NsiI ATGCAT 6 cut(s) 1306, 1327, 1889, 3601, 3867, 7063
NspI RCATGY 8 cut(s) 773, 1443, 3439, 4084, 4213, 6388, 8886, 8943
NspV TTCGAA 3 cut(s) 1351, 2785, 3320
PaeR7I CTCGAG 1 cut(s) 3652
PagI TCATGA 3 cut(s) 1114, 2043, 6903
PasI CCCWGGG 1 cut(s) 7959
PceI AGGCCT 1 cut(s) 1229
PciI ACATGT 5 cut(s) 1439, 3435, 4080, 6384, 8939
PciSI GCTCTTC 5 cut(s) 108, 1017, 2549, 3160, 6316
PdiI GCCGGC 1 cut(s) 4136
PdmI GAANNNNTTC 6 cut(s) 84, 1391, 1471, 1827, 4398, 7107
PflMI CCANNNNNTGG 2 cut(s) 5630, 6780
PfoI TCCNGGA 1 cut(s) 6218
PleI GAGTC 9 cut(s) 264, 401, 1456, 1780, 2558, 3082, 7813, 8357, 8526
PluTI GGCGCC 1 cut(s) 3282
PmaCI CACGTG 1 cut(s) 5645
PmlI CACGTG 1 cut(s) 5645
PpsI GAGTC 9 cut(s) 264, 401, 1456, 1780, 2558, 3082, 7813, 8357, 8526
Ppu21I YACGTR 3 cut(s) 2107, 5645, 8795
PpuMI RGGWCCY 2 cut(s) 2864, 4617
PscI ACATGT 5 cut(s) 1439, 3435, 4080, 6384, 8939
PshAI GACNNNNGTC 1 cut(s) 4813
PshBI ATTAAT 4 cut(s) 179, 2603, 2720, 9087
PsiI TTATAA 3 cut(s) 4059, 7031, 7485
Psp124BI GAGCTC 3 cut(s) 4351, 6677, 6705
Psp5II RGGWCCY 2 cut(s) 2864, 4617
Psp6I CCWGG 7 cut(s) 4782, 4973, 6218, 6482, 7958, 8385, 8463
PspCI CACGTG 1 cut(s) 5645
PspEI GGTNACC 2 cut(s) 2270, 9176
PspFI CCCAGC 1 cut(s) 5356
PspGI CCWGG 7 cut(s) 4782, 4973, 6218, 6482, 7958, 8385, 8463
PspOMI GGGCCC 1 cut(s) 3293
PspPPI RGGWCCY 2 cut(s) 2864, 4617
PsrI GAACNNNNNNTAC 2 cut(s) 958, 990
PstI CTGCAG 8 cut(s) 1287, 2553, 3111, 5620, 5680, 5692, 6244, 8961
PstNI CAGNNNCTG 2 cut(s) 1412, 7403
PvuII CAGCTG 7 cut(s) 230, 766, 1694, 3106, 5891, 5923, 6202
RruI TCGCGA 1 cut(s) 5845
RseI CAYNNNNRTG 4 cut(s) 5845, 6522, 8676, 8998
SacI GAGCTC 3 cut(s) 4351, 6677, 6705
SalI GTCGAC 1 cut(s) 404
SapI GCTCTTC 5 cut(s) 108, 1017, 2549, 3160, 6316
ScaI AGTACT 2 cut(s) 313, 6138
SchI GAGTC 9 cut(s) 264, 401, 1457, 1781, 2558, 3083, 7814, 8357, 8527
ScrFI CCNGG 9 cut(s) 2135, 4784, 4975, 5282, 6220, 6484, 7960, 8387, 8465
SfoI GGCGCC 1 cut(s) 3280
Sfr274I CTCGAG 1 cut(s) 3652
SfuI TTCGAA 3 cut(s) 1351, 2785, 3320
SlaI CTCGAG 1 cut(s) 3652
SmiMI CAYNNNNRTG 4 cut(s) 5845, 6522, 8676, 8998
SpeI ACTAGT 1 cut(s) 6830
SseBI AGGCCT 1 cut(s) 1229
SspDI GGCGCC 1 cut(s) 3278
SspI AATATT 6 cut(s) 444, 702, 7135, 7319, 8104, 8371
SstI GAGCTC 3 cut(s) 4351, 6677, 6705
StuI AGGCCT 1 cut(s) 1229
StyD4I CCNGG 9 cut(s) 2133, 4782, 4973, 5280, 6218, 6482, 7958, 8385, 8463
TaqII GACCGA 1 cut(s) 5599
TatI WGTACW 7 cut(s) 23, 311, 1436, 3269, 4047, 6136, 6859
TauI GCSGC 4 cut(s) 990, 3047, 4883, 9126
TspGWI ACGGA 7 cut(s) 4067, 5340, 6505, 8213, 8822, 8971, 9321
Van91I CCANNNNNTGG 2 cut(s) 5630, 6780
Vha464I CTTAAG 5 cut(s) 535, 1058, 1261, 1745, 3328
VneI GTGCAC 1 cut(s) 1653
VspI ATTAAT 4 cut(s) 179, 2603, 2720, 9087
XagI CCTNNNNNAGG 2 cut(s) 4457, 8960
XceI RCATGY 8 cut(s) 773, 1443, 3439, 4084, 4213, 6388, 8886, 8943
XcmI CCANNNNNNNNNTGG 2 cut(s) 5411, 6304
XhoI CTCGAG 1 cut(s) 3652
XmiI GTMKAC 2 cut(s) 405, 7205
XmnI GAANNNNTTC 6 cut(s) 84, 1391, 1471, 1827, 4398, 7107
ZrmI AGTACT 2 cut(s) 313, 6138
Zsp2I ATGCAT 6 cut(s) 1306, 1327, 1889, 3601, 3867, 7063
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.