Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0002031

Physical Location & Seq

Genomic Coordinates Forward (+)

17578850 .. 17591516

Gene Structure 12667 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g17380.15

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3093 bp

ATGAATATTGTCAAGGGTGTTGCTGACCTTATTCGAAGGACTTCCGGTGGCCACGATGGAGATTCTTCTTCAGGGACCCAAGCTCAGAAGTTCTCTCCTCCTGGCTTGAAGATCCGCTTTAGTGAAGTTGGAGATGAGGCAGTCCTAAACATACTTTGGGATCGATATGAAAAAGCTGTTGATAAGGTGGAAAAGAGGAGGCTGTTTCATGTTTTTCTTAAGCAGTTTCTGGTTGTATTCAAGAATTGGGAACCAGTAAATACAGGCCAAATGTCAGAGGCTTCTTCAACTACCATTCAATATACAGAATATTCATCACATTCAGATGATGTAGTTATTGGCTGCTTTGCTGGACATCCTGCAGAAGTCATCTTAGTATTGACTGAAGAGATTACACAATTAACTTCTATGGTTGCTGAGTTAAATACCAGTATAGTGCGATTGTTGGCAGACTTCTCTGGCCATTCTGCAACCTTAAATATCATTTCGGAAGGAATGCCACTCCTGGATGCTCTTATGATTGTTACTCGCTCATTACATAATTGCAGAGTTTTTGGATACTACAGTGGGATTCAAAAGCTAACGGCATTAATGAAAGGGGCTGTTGTCCAGCTTAAAACAATAAGCGGTGCACTTTCCGCTGATGAAAAGTCATCTAATTCTACTATGGAGAGGACTGGACTCTTGCAACAAATACTTGTATATGTGGTGTCAATAATGTGTAGTTTCATTGATTTAAATTCAAATGTATATGAGAGAGGTCAGTTGTGCAGTAATACTATAGGTTTTGATTCAAGGGGTTGTGCATCACCAGTTGGCTCTTCTGGTAAGGTTCCTTCCAGTGAAATAAGGTTACGATGGCATCAGAGGGCAGTTGTATCGGTGATGGAAGCTGGTGGACTTAATTGGTTAGTAGAGCTGCTGCGTGTAAGCAGAAGGTTGAGCATGAAAGAACAGTGGACGGATACCTCACTTCTGTATTTGTCTTTAAGAATTCTTCATATGACATTAGCACAGAATCCTCGTGGTCAAAATCATTTTAAAAGCATTGGAGGACTTGAAGTTCTGTTGGATGGTCTTGGAATACCGTCAAGTAATGTGCTAATACTGAAAAGTTCTGCTTCTGCCATTGAGAAAAGATATGAGAACCCCTTGCTAAAAAATTTCCAGCTCCATGTTCTTTCTCTGGAAGTTCTCAAAGAGGCTGTCTTTGGGAATATCGGCAACTTGCAATTTCTTTGTGAAAACGGGAGGGTTCAAAAATTCGCAAATAGCTTTTGTTCGCCTGCTTTCTTGTTTCAAGAGTACAAACAGCAGACCAAGAATATTCCTGGTCAGCCTGATTTCCAAACGCCGATGATTGACTTTGGAATTGAGAATACTGTGGAAAACCATATAACAGAGACTTCTGTTGCACTGCCTGCCAATGATTATTTCTCTCAACTTTGGAGTGATTATGCTGTTAAGCTGAGCAGAGTATTTTGTTCTTTTCTTCCTGCTTCAGAAGATATTAAATCTCATGATCTCGAAACATCCACTGGCCGAGCTGCTGTGGCAGTCTCTTCATTGTACGGTGAACTTTCGATCAAATCGATCGTGAGGGTTCTTCTTACAGTGTTCCCCTGCATTAAGGCCTGTTCAAATCAAAACGAACTGCCAAGCCAATTAAGGGTCTTTGTCAATACTCTGCAGCATTGCGTTTTAAATGCATTTAGGAAGGTTCTTGTTTCATCTCCAGTGTCACTCAAAGTATTTCGGGAAGAGGGAATCTGGGAACTCATATTTTCTGAGAATTTTTTCTATTTTGGACCAGCATCTGATGACCTTTCCGGAGAGTGTTGCACTTATTATGAGTCCCCAAGGAACCTTGAACTACTTTCTGCTTCTAGTGGCATCAACAGTCAAGCAAAAGTTTGTGGGATTGAAATTCTCCAAATGGAAGTGATTTCATTTGTGGAGTTTGCTGCAACTTCTAGTGGAAGTGCTCATAACTTGCCTGAATTATCTGCTTTATTAGATGCCCTTGAACACTCTGCTTGCAGTCCTGAAGTTGCTAGTGTTCTTGCCAAGAGTCTGCGTCGCGTGTTACAGCTTTCATCTGAGAAAACTGTTGCTTCTTTTAAGGCAGTTAATGCATTTCCTCGTGTGCTTAAAGTTGCTTGCATTCAAGCCCAAGAATCAAGAAGGGTTGGAAATACAAGCCCTAATGTTGATGAAGCGGTGCCTAGTCATCAGGGATCCAAATCACATCAGACAACGCAAAGATGGCTTAAATGCATGGAGACATCCATGGAGCTCTATATGGAATTTTTCTCAACAGCAGAAGATGCTAGAAGTTTGGTTCTGCATAGCATCGAATGTATTGGTTATTTATTTGATTTATTCTGGGAAGAAGGTTTGAGGGATAAGGTGCTTAGGCATATATTTGAGCTGATGAAGACTGTACCATCATCTGAAGAGGATCAAAGAGCAAAGTTACAGTTATTTTCTAAATACTTGGAAACATTCACTCAAATAAAGGAACGAGAGAAAAGCTTTGCTGAACTGTCTATCAATTTACTGGTCGGAATGAGAGATATGCTCAAGATCGATCCTGTGTACTATCAGACTTTATTTCGTGATGGAGAGTGCTTTTTGCATGTTGTCTCTTTACTAAATGGCAACCTTGAGGAGGCTAGTGGAGAAAACTTGGTTCTGAATGTTCTTCAAACTCTTACCTGTCTGCTTGCAGGCAATGATGCTTCGAAGGGATCTCAATTTTTGGCTAATTTATACGTTGTACATGTTGATTTTTGTAAATTTGTCTTTCCGAGGTTGCTTGACTCTCAAATATGCCAGCATTATTATGCTACATTTAGAGTTCTTGCAGGCAAGGGATACCAGACATTGCAAAGCTTACTGTTGGAGTCTTGTCAGTCACACTCAAGTGAAGGACTTTTGAATGCTTTGCTTGATATGCTTGTTGATGGAAAGTTTGATATGAAATCAGGCCCTAAAATAAAGAATGAAGATGTGATCGATACTTTATCTGCGTGTTTTGCGGGAGTGACTCATTGCAGCATAACGGGCTGGATGTGTTTCAACAACTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Beach DUF4704 DUF4800 Laminin_G_3 PH_BEACH WD40

Protein Analysis

1031

Amino Acids

114.6

Weight (kDa)

5.85

Isoelectric Point (pI)

44.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002031)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58230 AT1G58230 AT1G58230
fragaria_vesca	FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530 FvH4_5g34530
malus_domestica	MD08G1199800.v1.1 MD08G1200500.v1.1 MD08G1200600.v1.1 MD15G1387600.v1.1
prunus_persica	Prupe.1G534000_v2.0.a1 Prupe.1G534000_v2.0.a1 Prupe.1G534000_v2.0.a1 Prupe.1G534000_v2.0.a1
pyrus_communis	pycom08g17380 pycom08g17390 pycom08g17400 pycom15g34760 pycom15g34770 pycom15g34780 pycom15g34790
rosa_chinensis	RchiOBHm_Chr7g0235181
rosa_laevigata	RLG00000001175
rosa_multiflora	Rmu_co8395887.1_g000001 Rmu_sc0004657.1_g000019
rosa_roxburghii	Rroxscaffold_3G00226200
rosa_rugosa	Rorug07G0288800 Rorug07G0288900
rosa_samantha	Rh7AG443400 Rh7BG416100 Rh7CG464500 Rh7DG432900
rosa_wichuraiana	Rw7G036860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	2221
AccII	CGCG	1 cut(s)	2082
AccIII	TCCGGA	1 cut(s)	1829
AciI	CCGC	5 cut(s)	115, 627, 639, 2219, 3041
AclWI	GGATC	7 cut(s)	106, 168, 2232, 2245, 2469, 2585, 2758
AcoI	YGGCCR	3 cut(s)	49, 460, 1540
AcsI	RAATTY	8 cut(s)	739, 993, 1162, 1262, 1792, 1926, 2306, 2798
AcuI	CTGAAG	5 cut(s)	54, 405, 1485, 2067, 2475
AfaI	GTAC	5 cut(s)	1307, 1571, 2445, 2600, 2781
AfiI	CCNNNNNNNGG	2 cut(s)	1669, 2671
AflII	CTTAAG	1 cut(s)	218
AflIII	ACRYGT	1 cut(s)	2782
AjnI	CCWGG	3 cut(s)	100, 504, 1330
AjuI	GAANNNNNNNTTGG	2 cut(s)	1418, 1450
AleI	CACNNNNGTG	1 cut(s)	2925
AloI	GAACNNNNNNTCC	2 cut(s)	1047, 1079
Alw21I	GWGCWC	3 cut(s)	634, 1987, 2298
Alw26I	GTCTC	4 cut(s)	1397, 1564, 2276, 2650
Alw44I	GTGCAC	1 cut(s)	630
AlwI	GGATC	7 cut(s)	106, 168, 2232, 2245, 2469, 2585, 2758
AlwNI	CAGNNNCTG	2 cut(s)	229, 1817
Aor13HI	TCCGGA	1 cut(s)	1829
AoxI	GGCC	6 cut(s)	49, 265, 460, 1540, 1632, 2989
ApaLI	GTGCAC	1 cut(s)	630
ApeKI	GCWGC	7 cut(s)	342, 919, 922, 1547, 1690, 1964, 3057
ApoI	RAATTY	8 cut(s)	739, 993, 1162, 1262, 1792, 1926, 2306, 2798
ArsI	GACNNNNNNTTYG	2 cut(s)	1191, 1223
AseI	ATTAAT	1 cut(s)	590
Asp700I	GAANNNNTTC	2 cut(s)	40, 1796
AspS9I	GGNCC	3 cut(s)	75, 1808, 2990
AsuHPI	GGTGA	3 cut(s)	801, 895, 1586
AsuII	TTCGAA	2 cut(s)	34, 2744
AvaII	GGWCC	2 cut(s)	75, 1808
BaeGI	GKGCMC	1 cut(s)	634
BaeI	ACNNNNGTAYC	2 cut(s)	550, 583
BalI	TGGCCA	2 cut(s)	51, 462
BamHI	GGATCC	1 cut(s)	2237
BanI	GGYRCC	1 cut(s)	2221
BanII	GRGCYC	1 cut(s)	2298
BarI	GAAGNNNNNNTAC	2 cut(s)	820, 852
BauI	CACGAG	2 cut(s)	1023, 2142
BbsI	GAAGAC	1 cut(s)	2444
Bbv12I	GWGCWC	3 cut(s)	634, 1987, 2298
BbvI	GCAGC	7 cut(s)	329, 906, 909, 1534, 1702, 1951, 3069
BccI	CCATC	8 cut(s)	50, 852, 880, 1067, 2259, 2455, 2615, 2960
BceAI	ACGGC	1 cut(s)	600
BcgI	CGANNNNNNTGC	2 cut(s)	861, 895
BciT130I	CCWGG	3 cut(s)	102, 506, 1332
BciVI	GTATCC	3 cut(s)	551, 958, 2870
BcoDI	GTCTC	4 cut(s)	1397, 1564, 2276, 2650
BfaI	CTAG	6 cut(s)	1887, 1974, 2055, 2226, 2331, 2676
BfmI	CTRYAG	4 cut(s)	360, 562, 780, 1688
BfrI	CTTAAG	1 cut(s)	218
BfuI	GTATCC	3 cut(s)	551, 958, 2870
BisI	GCNGC	7 cut(s)	343, 920, 923, 1548, 1691, 1965, 3058
BlpI	GCTNAGC	1 cut(s)	1469
BlsI	GCNGC	7 cut(s)	344, 921, 924, 1549, 1692, 1966, 3059
Bme1390I	CCNGG	3 cut(s)	102, 506, 1332
Bme18I	GGWCC	2 cut(s)	75, 1808
BmgT120I	GGNCC	3 cut(s)	75, 1808, 2990
BmiI	GGNNCC	7 cut(s)	76, 77, 252, 834, 1865, 2223, 2239
BmrFI	CCNGG	3 cut(s)	102, 506, 1332
BmsI	GCATC	9 cut(s)	499, 815, 871, 1823, 1902, 2008, 2317, 2361, 2728
BpiI	GAAGAC	1 cut(s)	2444
BplI	GAGNNNNNCTC	2 cut(s)	2565, 2597
BpmI	CTGGAG	1 cut(s)	1719
Bpu10I	CCTNAGC	1 cut(s)	2414
Bpu1102I	GCTNAGC	1 cut(s)	1469
Bpu14I	TTCGAA	2 cut(s)	34, 2744
BpuEI	CTTGAG	3 cut(s)	2567, 2687, 2908
Bsa29I	ATCGAT	4 cut(s)	163, 1592, 2589, 3018
BsaBI	GATNNNNATC	1 cut(s)	2242
BsaJI	CCNNGG	3 cut(s)	1859, 2289, 2810
BsaWI	WCCGGW	2 cut(s)	44, 1829
Bsc4I	CCNNNNNNNGG	2 cut(s)	1669, 2671
Bse1I	ACTGG	8 cut(s)	254, 429, 682, 812, 840, 1543, 1736, 2565
Bse3DI	GCAATG	4 cut(s)	1693, 2740, 2885, 3052
Bse8I	GATNNNNATC	1 cut(s)	2242
BseAI	TCCGGA	1 cut(s)	1829
BseBI	CCWGG	3 cut(s)	102, 506, 1332
BseCI	ATCGAT	4 cut(s)	163, 1592, 2589, 3018
BseDI	CCNNGG	3 cut(s)	1859, 2289, 2810
BseGI	GGATG	6 cut(s)	355, 514, 1078, 1532, 2285, 3078
BseJI	GATNNNNATC	1 cut(s)	2242
BseLI	CCNNNNNNNGG	2 cut(s)	1669, 2671
BseMI	GCAATG	4 cut(s)	1693, 2740, 2885, 3052
BseMII	CTCAG	5 cut(s)	98, 408, 1460, 1779, 2091
BseNI	ACTGG	8 cut(s)	254, 429, 682, 812, 840, 1543, 1736, 2565
BseRI	GAGGAG	3 cut(s)	87, 211, 2684
BseSI	GKGCMC	1 cut(s)	634
BseXI	GCAGC	7 cut(s)	329, 906, 909, 1534, 1702, 1951, 3069
BsgI	GTGCAG	1 cut(s)	790
Bsh1236I	CGCG	1 cut(s)	2082
Bsh1285I	CGRYCG	1 cut(s)	1596
BshFI	GGCC	6 cut(s)	51, 267, 462, 1542, 1634, 2991
BshNI	GGYRCC	1 cut(s)	2221
BshVI	ATCGAT	4 cut(s)	163, 1592, 2589, 3018
BsiEI	CGRYCG	1 cut(s)	1596
BsiHKAI	GWGCWC	3 cut(s)	634, 1987, 2298
BsiSI	CCGG	2 cut(s)	45, 1830
BslFI	GGGAC	2 cut(s)	88, 1840
BslI	CCNNNNNNNGG	2 cut(s)	1669, 2671
BsmAI	GTCTC	4 cut(s)	1397, 1564, 2276, 2650
BsmFI	GGGAC	2 cut(s)	88, 1840
BsmI	GAATGC	3 cut(s)	501, 2163, 2947
BsnI	GGCC	6 cut(s)	51, 267, 462, 1542, 1634, 2991
Bsp119I	TTCGAA	2 cut(s)	34, 2744
Bsp1286I	GDGCHC	3 cut(s)	634, 1987, 2298
Bsp13I	TCCGGA	1 cut(s)	1829
Bsp1407I	TGTACA	1 cut(s)	2779
Bsp1720I	GCTNAGC	1 cut(s)	1469
Bsp19I	CCATGG	1 cut(s)	2289
BspACI	CCGC	5 cut(s)	115, 627, 639, 2219, 3041
BspANI	GGCC	6 cut(s)	51, 267, 462, 1542, 1634, 2991
BspCNI	CTCAG	5 cut(s)	97, 409, 1461, 1780, 2092
BspDI	ATCGAT	4 cut(s)	163, 1592, 2589, 3018
BspEI	TCCGGA	1 cut(s)	1829
BspFNI	CGCG	1 cut(s)	2082
BspHI	TCATGA	1 cut(s)	1519
BspLI	GGNNCC	7 cut(s)	76, 77, 252, 834, 1865, 2223, 2239
BspMAI	CTGCAG	2 cut(s)	364, 1692
BspPI	GGATC	7 cut(s)	106, 168, 2232, 2245, 2469, 2585, 2758
BspQI	GCTCTTC	1 cut(s)	826
BspT104I	TTCGAA	2 cut(s)	34, 2744
BspT107I	GGYRCC	1 cut(s)	2221
BspTI	CTTAAG	1 cut(s)	218
BsrDI	GCAATG	4 cut(s)	1693, 2740, 2885, 3052
BsrGI	TGTACA	1 cut(s)	2779
BsrI	ACTGG	8 cut(s)	254, 429, 682, 812, 840, 1543, 1736, 2565
BssECI	CCNNGG	3 cut(s)	1859, 2289, 2810
BssSI	CACGAG	2 cut(s)	1023, 2142
BssT1I	CCWWGG	2 cut(s)	1859, 2289
Bst2BI	CACGAG	2 cut(s)	1023, 2142
Bst2UI	CCWGG	3 cut(s)	102, 506, 1332
Bst6I	CTCTTC	5 cut(s)	381, 826, 1567, 1755, 2451
BstAFI	CTTAAG	1 cut(s)	218
BstAPI	GCANNNNNTGC	3 cut(s)	1421, 2132, 2327
BstAUI	TGTACA	1 cut(s)	2779
BstBI	TTCGAA	2 cut(s)	34, 2744
BstC8I	GCNNGC	8 cut(s)	1287, 1422, 2038, 2161, 2727, 2731, 2837, 2869
BstDEI	CTNAG	7 cut(s)	84, 373, 417, 1469, 1788, 2100, 2414
BstDSI	CCRYGG	1 cut(s)	2289
BstENI	CCTNNNNNAGG	1 cut(s)	2669
BstF5I	GGATG	6 cut(s)	355, 514, 1078, 1532, 2285, 3078
BstFNI	CGCG	1 cut(s)	2082
BstMAI	GTCTC	4 cut(s)	1397, 1564, 2276, 2650
BstMCI	CGRYCG	1 cut(s)	1596
BstMWI	GCNNNNNNNGC	9 cut(s)	638, 1421, 1553, 2132, 2266, 2327, 2956, 3038, 3066
BstNI	CCWGG	3 cut(s)	102, 506, 1332
BstNSI	RCATGY	2 cut(s)	2642, 2786
BstSCI	CCNGG	3 cut(s)	100, 504, 1330
BstSFI	CTRYAG	4 cut(s)	360, 562, 780, 1688
BstSLI	GKGCMC	1 cut(s)	634
BstUI	CGCG	1 cut(s)	2082
BstV1I	GCAGC	7 cut(s)	329, 906, 909, 1534, 1702, 1951, 3069
BstV2I	GAAGAC	1 cut(s)	2444
BstX2I	RGATCY	3 cut(s)	111, 2237, 2750
BstYI	RGATCY	3 cut(s)	111, 2237, 2750
Bsu15I	ATCGAT	4 cut(s)	163, 1592, 2589, 3018
BsuI	GTATCC	3 cut(s)	551, 958, 2870
BsuRI	GGCC	6 cut(s)	51, 267, 462, 1542, 1634, 2991
BsuTUI	ATCGAT	4 cut(s)	163, 1592, 2589, 3018
BtgI	CCRYGG	1 cut(s)	2289
BtsCI	GGATG	6 cut(s)	355, 514, 1078, 1532, 2285, 3078
BtsI	GCAGTG	1 cut(s)	1415
BtsIMutI	CAGTG	7 cut(s)	571, 847, 962, 1415, 1536, 1620, 1743
Cac8I	GCNNGC	8 cut(s)	1287, 1422, 2038, 2161, 2727, 2731, 2837, 2869
CaiI	CAGNNNCTG	2 cut(s)	229, 1817
CciI	TCATGA	1 cut(s)	1519
Cfr13I	GGNCC	3 cut(s)	75, 1808, 2990
ClaI	ATCGAT	4 cut(s)	163, 1592, 2589, 3018
CseI	GACGC	1 cut(s)	2066
Csp6I	GTAC	5 cut(s)	1306, 1570, 2444, 2599, 2780
CviAII	CATG	8 cut(s)	209, 946, 1175, 1520, 2278, 2290, 2639, 2783
CviQI	GTAC	5 cut(s)	1306, 1570, 2444, 2599, 2780
DdeI	CTNAG	7 cut(s)	84, 373, 417, 1469, 1788, 2100, 2414
DraI	TTTAAA	3 cut(s)	738, 1042, 1704
EaeI	YGGCCR	3 cut(s)	49, 460, 1540
Eam1104I	CTCTTC	5 cut(s)	381, 826, 1567, 1755, 2451
EarI	CTCTTC	5 cut(s)	381, 826, 1567, 1755, 2451
Ecl136II	GAGCTC	1 cut(s)	2296
Eco130I	CCWWGG	2 cut(s)	1859, 2289
Eco147I	AGGCCT	1 cut(s)	1634
Eco24I	GRGCYC	1 cut(s)	2298
Eco47I	GGWCC	2 cut(s)	75, 1808
Eco53kI	GAGCTC	1 cut(s)	2296
Eco57I	CTGAAG	5 cut(s)	54, 405, 1485, 2067, 2475
EcoICRI	GAGCTC	1 cut(s)	2296
EcoNI	CCTNNNNNAGG	1 cut(s)	2669
EcoO109I	RGGNCCY	2 cut(s)	75, 2990
EcoRI	GAATTC	1 cut(s)	993
EcoRII	CCWGG	3 cut(s)	100, 504, 1330
EcoT14I	CCWWGG	2 cut(s)	1859, 2289
EcoT22I	ATGCAT	3 cut(s)	1711, 2137, 2279
EcoT38I	GRGCYC	1 cut(s)	2298
ErhI	CCWWGG	2 cut(s)	1859, 2289
FaeI	CATG	8 cut(s)	212, 949, 1178, 1523, 2281, 2293, 2642, 2786
FalI	AAGNNNNNCTT	4 cut(s)	101, 133, 1105, 1137
FaqI	GGGAC	2 cut(s)	88, 1840
FatI	CATG	8 cut(s)	208, 945, 1174, 1519, 2277, 2289, 2638, 2782
FauI	CCCGC	1 cut(s)	3034
FauNDI	CATATG	1 cut(s)	1002
Fnu4HI	GCNGC	7 cut(s)	343, 920, 923, 1548, 1691, 1965, 3058
FokI	GGATG	6 cut(s)	342, 521, 1085, 1519, 2272, 3085
FriOI	GRGCYC	1 cut(s)	2298
Fsp4HI	GCNGC	7 cut(s)	343, 920, 923, 1548, 1691, 1965, 3058
FspBI	CTAG	6 cut(s)	1887, 1974, 2055, 2226, 2331, 2676
GluI	GCNGC	7 cut(s)	343, 920, 923, 1548, 1691, 1965, 3058
GsuI	CTGGAG	1 cut(s)	1719
HaeIII	GGCC	6 cut(s)	51, 267, 462, 1542, 1634, 2991
HapII	CCGG	2 cut(s)	45, 1830
HgaI	GACGC	1 cut(s)	2066
Hin1II	CATG	8 cut(s)	212, 949, 1178, 1523, 2281, 2293, 2642, 2786
HindIII	AAGCTT	2 cut(s)	2533, 2893
HpaII	CCGG	2 cut(s)	45, 1830
HphI	GGTGA	3 cut(s)	801, 895, 1586
Hpy166II	GTNNAC	5 cut(s)	632, 899, 960, 1577, 2599
Hpy8I	GTNNAC	5 cut(s)	632, 899, 960, 1577, 2599
Hpy99I	CGWCG	1 cut(s)	2082
HpyAV	CCTTC	9 cut(s)	30, 485, 846, 930, 1711, 2178, 2387, 2740, 2924
HpyCH4IV	ACGT	1 cut(s)	2775
HpyF10VI	GCNNNNNNNGC	9 cut(s)	638, 1421, 1553, 2132, 2266, 2327, 2956, 3038, 3066
HpyF3I	CTNAG	7 cut(s)	84, 373, 417, 1469, 1788, 2100, 2414
HpySE526I	ACGT	1 cut(s)	2775
Hsp92II	CATG	8 cut(s)	212, 949, 1178, 1523, 2281, 2293, 2642, 2786
KflI	GGGWCCC	1 cut(s)	75
Kpn2I	TCCGGA	1 cut(s)	1829
LguI	GCTCTTC	1 cut(s)	826
LmnI	GCTCC	2 cut(s)	1176, 2293
Lsp1109I	GCAGC	7 cut(s)	329, 906, 909, 1534, 1702, 1951, 3069
LweI	GCATC	9 cut(s)	499, 815, 871, 1823, 1902, 2008, 2317, 2361, 2728
MaeI	CTAG	6 cut(s)	1887, 1974, 2055, 2226, 2331, 2676
MaeII	ACGT	1 cut(s)	2775
MaeIII	GTNAC	7 cut(s)	523, 852, 1740, 2085, 2475, 2916, 3046
MflI	RGATCY	3 cut(s)	111, 2237, 2750
MhlI	GDGCHC	3 cut(s)	634, 1987, 2298
MlsI	TGGCCA	2 cut(s)	51, 462
MluNI	TGGCCA	2 cut(s)	51, 462
MlyI	GAGTC	6 cut(s)	675, 1862, 2080, 2816, 2915, 3043
MmeI	TCCRAC	5 cut(s)	109, 1050, 2170, 2545, 2883
Mox20I	TGGCCA	2 cut(s)	51, 462
Mph1103I	ATGCAT	3 cut(s)	1711, 2137, 2279
MroI	TCCGGA	1 cut(s)	1829
MroXI	GAANNNNTTC	2 cut(s)	40, 1796
MscI	TGGCCA	2 cut(s)	51, 462
MslI	CAYNNNNRTG	3 cut(s)	324, 2844, 2925
Msp20I	TGGCCA	2 cut(s)	51, 462
MspA1I	CMGCKG	1 cut(s)	641
MspCI	CTTAAG	1 cut(s)	218
MspI	CCGG	2 cut(s)	45, 1830
MspR9I	CCNGG	3 cut(s)	102, 506, 1332
Mva1269I	GAATGC	3 cut(s)	501, 2163, 2947
MvaI	CCWGG	3 cut(s)	102, 506, 1332
MvnI	CGCG	1 cut(s)	2082
MwoI	GCNNNNNNNGC	9 cut(s)	638, 1421, 1553, 2132, 2266, 2327, 2956, 3038, 3066
NcoI	CCATGG	1 cut(s)	2289
NdeI	CATATG	1 cut(s)	1002
NlaIII	CATG	8 cut(s)	212, 949, 1178, 1523, 2281, 2293, 2642, 2786
NlaIV	GGNNCC	7 cut(s)	76, 77, 252, 834, 1865, 2223, 2239
NmeAIII	GCCGAG	1 cut(s)	1568
NmuCI	GTSAC	3 cut(s)	1740, 2916, 3046
NsiI	ATGCAT	3 cut(s)	1711, 2137, 2279
NspI	RCATGY	2 cut(s)	2642, 2786
NspV	TTCGAA	2 cut(s)	34, 2744
OliI	CACNNNNGTG	1 cut(s)	2925
PagI	TCATGA	1 cut(s)	1519
PceI	AGGCCT	1 cut(s)	1634
PciI	ACATGT	1 cut(s)	2782
PciSI	GCTCTTC	1 cut(s)	826
PcsI	WCGNNNNNNNCGW	1 cut(s)	1589
PctI	GAATGC	3 cut(s)	501, 2163, 2947
PdmI	GAANNNNTTC	2 cut(s)	40, 1796
PfeI	GAWTC	6 cut(s)	62, 571, 791, 1018, 1767, 2177
PfoI	TCCNGGA	1 cut(s)	504
PkrI	GCNGC	7 cut(s)	344, 921, 924, 1549, 1692, 1966, 3059
Ple19I	CGATCG	1 cut(s)	1596
PleI	GAGTC	6 cut(s)	675, 1861, 2079, 2816, 2914, 3043
PpsI	GAGTC	6 cut(s)	675, 1861, 2079, 2816, 2914, 3043
PpuMI	RGGWCCY	1 cut(s)	75
PscI	ACATGT	1 cut(s)	2782
PshBI	ATTAAT	1 cut(s)	590
Psp124BI	GAGCTC	1 cut(s)	2298
Psp5II	RGGWCCY	1 cut(s)	75
Psp6I	CCWGG	3 cut(s)	100, 504, 1330
PspGI	CCWGG	3 cut(s)	100, 504, 1330
PspN4I	GGNNCC	7 cut(s)	76, 77, 252, 834, 1865, 2223, 2239
PspPI	GGNCC	3 cut(s)	75, 1808, 2990
PspPPI	RGGWCCY	1 cut(s)	75
PstI	CTGCAG	2 cut(s)	364, 1692
PstNI	CAGNNNCTG	2 cut(s)	229, 1817
PsuI	RGATCY	3 cut(s)	111, 2237, 2750
PvuI	CGATCG	1 cut(s)	1596
RsaI	GTAC	5 cut(s)	1307, 1571, 2445, 2600, 2781
RsaNI	GTAC	5 cut(s)	1306, 1570, 2444, 2599, 2780
RseI	CAYNNNNRTG	3 cut(s)	324, 2844, 2925
SacI	GAGCTC	1 cut(s)	2298
SapI	GCTCTTC	1 cut(s)	826
SatI	GCNGC	7 cut(s)	343, 920, 923, 1548, 1691, 1965, 3058
Sau96I	GGNCC	3 cut(s)	75, 1808, 2990
SchI	GAGTC	6 cut(s)	675, 1862, 2080, 2816, 2915, 3043
ScrFI	CCNGG	3 cut(s)	102, 506, 1332
SduI	GDGCHC	3 cut(s)	634, 1987, 2298
SfaNI	GCATC	9 cut(s)	499, 815, 871, 1823, 1902, 2008, 2317, 2361, 2728
SfcI	CTRYAG	4 cut(s)	360, 562, 780, 1688
SfuI	TTCGAA	2 cut(s)	34, 2744
SinI	GGWCC	2 cut(s)	75, 1808
SmiI	ATTTAAAT	1 cut(s)	738
SmiMI	CAYNNNNRTG	3 cut(s)	324, 2844, 2925
SmlI	CTYRAG	4 cut(s)	218, 2582, 2666, 2923
SmoI	CTYRAG	4 cut(s)	218, 2582, 2666, 2923
SseBI	AGGCCT	1 cut(s)	1634
SsiI	CCGC	5 cut(s)	115, 627, 639, 2219, 3041
SspI	AATATT	3 cut(s)	7, 311, 1327
SspMI	CTAG	6 cut(s)	1887, 1974, 2055, 2226, 2331, 2676
SstI	GAGCTC	1 cut(s)	2298
StuI	AGGCCT	1 cut(s)	1634
StyD4I	CCNGG	3 cut(s)	100, 504, 1330
StyI	CCWWGG	2 cut(s)	1859, 2289
SwaI	ATTTAAAT	1 cut(s)	738
TaiI	ACGT	1 cut(s)	2778
TaqI	TCGA	9 cut(s)	34, 163, 1527, 1583, 1592, 2355, 2589, 2744, 3018
TatI	WGTACW	3 cut(s)	1305, 2598, 2779
TfiI	GAWTC	6 cut(s)	62, 571, 791, 1018, 1767, 2177
TscAI	CASTG	7 cut(s)	571, 847, 962, 1422, 1543, 1620, 1743
TseFI	GTSAC	3 cut(s)	1740, 2916, 3046
TseI	GCWGC	7 cut(s)	342, 919, 922, 1547, 1690, 1964, 3057
Tsp45I	GTSAC	3 cut(s)	1740, 2916, 3046
TspGWI	ACGGA	1 cut(s)	977
TspRI	CASTG	7 cut(s)	571, 847, 962, 1422, 1543, 1620, 1743
Vha464I	CTTAAG	1 cut(s)	218
VneI	GTGCAC	1 cut(s)	630
VpaK11BI	GGWCC	2 cut(s)	75, 1808
VspI	ATTAAT	1 cut(s)	590
XagI	CCTNNNNNAGG	1 cut(s)	2669
XapI	RAATTY	8 cut(s)	739, 993, 1162, 1262, 1792, 1926, 2306, 2798
XceI	RCATGY	2 cut(s)	2642, 2786
XmnI	GAANNNNTTC	2 cut(s)	40, 1796
XspI	CTAG	6 cut(s)	1887, 1974, 2055, 2226, 2331, 2676
Zsp2I	ATGCAT	3 cut(s)	1711, 2137, 2279

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.