Rmu_sc0004657.1_g000019

BEACH domain-containing protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004657.1
Physical Location & Seq
Reverse (-)
61622 .. 108037
46416 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004657.1_g000019.1.cds

Sequence Viewer

Length: 10401 bp
atggctgacatccattttgagactgaggaggtagggctacagatggactcgagcctcgtggtgttgggggctgcagcgtttcaggatgggaactggtgcatggtgggccgtttgttggcgccgaaagcaaggttgcccggtttcaagggtactatttccacgatttggaatatcagatcaggactgaccattcaggatgcaggggagcgttttgtgttccaatttgagaatgaaggtgtgcgcaaccggatcttgcgtggcggtccctggttttatcggaatactatgctggtggtgggagaatatgatggtctcaatccagtggaggaggtgcctctaaatctgatggaggcctgggaagcacatcaagctgcctccagcatgatccagtcgccagagcttccaactggcagagatggtgttgtcgaggaggaggacaaggtcgcgcaatcagatcaggtttcgaggaggctttgggctcgagctcccagaggacgtcagcgacatcatccacgacccctgcctagtcgaaagactactttcggtcccggtgaagttggagatgaggccgttctaaatatactttgggctagatatcaaaaagctgtcgataaggtggaaaagaggaggctgcttcatgtttttctcaagcagttcctagttgtatacaagaactgggaaccagtaaattctgaccaaaattcagaggctgcttcgactaccatccaacatgcagagtctgatgatgtagttattggttgctttgccggacatcccgcagaagtcatcttagtattgactgaagagattacacaattaactgctatggttgttgaattaaatagcagtacagtccgatcagcagacttctgtggccattccacaatcttaaatatcatttctgaagggattccactccttgatgctcttctgattgttaatcgttcgctgcaaaattgcagagttttgggatactatggtggcattccaaagctaacggcattaatgaaaggggttgttgtccaacttaaaacaataagttgcgcactttcagctgacgaaaaattatctaattttaccgtggagaagacaggactcctgcaacaaatacttgtatatgtggtgtcaataataagtacttttattgatttgaattcaaatgtaaatgagaaatgtcagttgtatagtaataccataggctttgtcacggggggtggtgcatctcctgtcgactcttctagtagttcaaatgctccccctagtgaaatattgttacgttggcatcagagggcagttgtgtctgtgatggaagctggtggacttaattggttagtagagctgctgcgtgtgatccgaagcttaagcatgaaagaacagtggacagatacatcacttctgtatttgtctttgagaattcttcattcaacattatctcagaaccctcgtggtcaaaatctttttaaaagcattggaggacttgaagttctattggatggtcttggaataccatcaaataatgggctaacattgaaaaactctgcttgtgctgctgacaagagatctgagaatcccttgataaaaatcttccagctgcatgttctctccttggaagttctcaaagaggctgtctttgggaatttcagcaacttgcaatttctatgtgaaaatggaagggttcagaaattcgcaaatagcttttgttcccctgctttcacgtttcacgagtataaacaacacaccaagggattgtctggtcagcaagattctcaaatgcctgaagttgactttggaactggcaatactgtgaatagtcgcattgcagaggtttctgttgctcttcctgccgatggttcttactctcaagtttggaatgattatgttcttaagttgagcggagtattttgttctttccttccctcttcagaagatataaaatctcatgatgttgaactgtccactggtcgaattactgtgccattttcttcatcgtatggtgaactttcagtggcatggatcatgagggttcttcaaacagtgttcccctgcattaaggcctgttcagatcaaaatgatttaaaaagccacttaagggtctttgtcactgcgctgcagcactctgtattgaatgcatttaggatggttcttgatgcatcccctgtttcactcaaagtatttcgagacgagggaatctgggagcttatattttctgagaattttttctattttggaccagctcctgatgatctttctggagagtgctgtacatgtattgagtccctgaggaaaaatggaatgctttcttcttctagtgacatcatcagtcaagcaagagtttgtgggattggagttctccaaatggatgtgatttcatttttggagtttgctgcaacttctaatgggagcccagacaattcgcctgaattatctgctcttgtagaagcccttgaacagtgtgcttgcaatcctgatgtttctagtgcacttgccaagtgtttgcttcgcatattaaagctttcagctgagaaaactattgcttcgtttaaagcagttaattcatttcctcgtgtgcttaaggttgtttgcattcaatcccaagagtcaagaaggtctagcaatataatcctttctgttgagagtaatgtcggtgaagtggttccatgtcagcagaagagatctaagtcacatgagacaatgcagagatggatcaaatgcatggaaacatccatggagctttatatggagtttttctctacaatagaagatgctggaagtttggttttgcatagctctgaatgtattggtcggttgtttgatttattctggatagaaggtttgagaaataaagtgctaaagcatattcttgatctcatgaagattgtaccatcatctgaagaagatcaaagagcaaagttgcagttatgttctaaatacgtggaaacattcactcaaataaaggaccgggaaagaaactttgttgcgctatctatcaatttactagccggaatgcaagatatgctccagattgatcctgtgtcctatcagactttgtttcgtgagggagagtgctttttgcacattgtctctttactaaatggtaaccttgatgatgctaatggagagactttggttctgggtgtccttcaaactcttacctgtttgcttgcaagcaatgacacatcaaaggccacatttagaggtcttgcgggcaaggggtaccagacattgcaaagtctattgttggagttttgccagtctcgctcaagtgaaggacttttgaatgcgctgcttgatatgcttgttgatggaaagtttgatatgaaagcaagtcctaaaataaagaatgaagacgtgatcatactttatctcagcgtcctgcagaagagcagtgactcgttgcagcatagtgggcttgatgtgtttcagcaattaatgagggattccatttccaatcgagcttcttgcgtcagagcaggaatgctcgattttctacttgattggttttcacaagaaggtaatgatagtgtcatcttgaaaattgcccaattaattcaagttgttggtgggcatagcacatctgggaaggacattcgcaaaatctttgccctccttcgaagtgagaaaattgggaatcagcacaagtattgctcactgttgttgtccagtgttttgtcaatgctaaaggaaaagggacctactgccttttttgacctcaatgggaatgattctgggatcatgattaaaacacctgttcagtggccactcaacaagggattttctttttcatgttggttgagggtagagaatttccccagaagtgggacaatgggtcttttcagtttccttacagaaaatggaagagggtgcatggcggcactagcgaaggacaagcttctgtatgagtccatcaatctgaagcgacactctgtccagctgcagctaaaaattgtcacaaagaaatggcatttgctatgtataactcatagcataggaagagctttttcagggggtagcttattgaggtgttacgttgatggtgatcttgtttcttctgaaagatgcagttatgcgaaagttaatgacttgctaacaagttgtacagttggcgccaaatttgacgggcccctgtctgatgatgatttatcttcgaaatccataagggattcgcatccttttcttggtcaggttggtcctgtttatctgttcaatgatgccatttcttctgagcaagttcagggcatctgttctcttggaccaagctacatgtattcgttccttgacaatgatgcttcatcatctaatgaaactaagctcggaggggttcttgatgtcaaagatggtcttgcatcgaaaattatttttggacttaatgctcaggcaagtaatggcaggacactatttaatgtttcaccaatgctggatcatgcatcagataggaactcatttgaagcaaccatgatggttggcacgcagcaatgctcgagacgcttactgcaacagataatttactgtgtgggaggggtatcagttttcttccctcttattgcccagtctgaaaaatatgaaaatgaagaaagtgggcaatttaaagatacgtttcctatacctataactagagatcgggtgactgctgaagtcattgagctaatcgcttctgtgcttgatgagaatgtagctaatcaacaacagatgcatcttctctctgggttctcaatactgggattcttgttgcagtcagttcctcctcagcaacttaatttggaaacactttcatctctaaaacatttctatcatatcgttgcaaactgtggcttggctgaactgcttaccaaagaggctatatctagcatatttcttaaccctctcatctggctgtacacggattataaggtgcagcgagaattatacatgtttgtcatctggcagtttgataatgatccaaggatgcttaaaagcctttgccggctcccccgtgttattgatataatacgccaattctattgggataatccaaaatctcgatttgctattggaaacatgcctctcattcatcccatcacaaaacaagttcttggagagagacctagtaatgacgaaatacataaaattcgtcttcttttgttgagccttggcgaattgagccttaggcagaacattgcaggggcagatataagagctctaatagctttctttgagacaagtcaggatatgacctgcattgaagatgttctacatatggttattcgagcgatttctcaaaagccactgcttgcagatttccttgaacaggtcaatttgattggtggctgtcacatatttgccaatcttcttcagagagaacatgaacctatcagattacttagcttgcagctccttggaaagcttttagttgatctcccatctgagaaaaagggagcaagatttttcaatcttgcagtcggaaggtcccgatcgctttctgacggccataaaaaaatctcaaagcaaccaattttttcagccatgtctgatagattatttaggtttccacaaacagataacttgtgtgccactctgtttgatgttcttcttggtggtgctagccctaaacaggtattacagaagcacaacctggctgagaagcagagaagcaaaggacatatgtcacattttctccttcctcaaattttggttcttatatttagattcctgtctggctgtgaggatgcagcttcaagaatgaaaattatcagagatttacttgatcttcttgattcggatccttcaaatgtcgaagcttttatggattttggatggaatgcctggttaacagcttgtgtgaagcttggtgtgttcaaagactacaaagttactccagaagatcaagatcacgatgagaaaacagaacaagatttagtgcggaatatattttgtgttgttctttgttactatgttcattctgtgaaaggtgggtggcaccagttagaagagacggtaactttcctgctaatgcagtgtgaacatggtggagtttcatttcggtacttgcttcgtgacatatataaggatctgatcaggggattgttggaattgtcgtctgaagagagtatttttgtgtcgcaaccgagccgggacaacacattataccttctaagactgatcgatgagatgctcatttctgaaatggaccaaaaccttccgggtggagtttcatttcggtacttgcttcgtgacatatataaggatctgatcaggggattgttggaattgtcgtctgaagagagtatttttgtgtcgcaaccgagccgggacaacacattataccttctaagactgatcgatgagatgctcatttctgaaatggaccaaaaccttccgttcccagcaagcactacagatttctctcttgattcgttagagttagaacgccataaagattatggttctgccttgtttgaagtggtgcatggagaaaatgacagccaaatatcaaggacttctgggagttgcaagcagcctgtcaaaagtgaagatggcattgtcagtgacaagtggtgggatctgtatgacagtttgtggattattattagtgagatgaatggtaagggaccgagcaagtcgttatcgaaatcatcaccaactgcaattccatcttttggtcagagagcacgtggcttagtagaatcgttgaacattcctgctgcagaggtggctgcagttgttgtatcaggagggataggcagtgcattaggtggcaaaccaaacaaaaatgtcgataaggcaatgctcttacgaggagagaggtcttctttagaaagagcatcgcgatgcgtccaactggtcattccacttctgccatttctcttatcagctgatgacgagcaaagtaaaagcagattgcagctgttcatctgggcattgcttgttgttaggtcgcagtttggaatgctagatgacggtgctcgttttcatgttatatcgcacttgattcgagaaactatcagctttggtaaatcaatgcttgctagtagcattatgggtagggaggattccttggattcaggcagcaatgtaaaagaaaccggatccattcacaatctgattcagcgagatcgagtacttgcagcagttgcagaggagttaaaatatataaagtcattagatgctgatcgccaaaggcagctgcatgaactccactccaggatggatgaaaatgcctctgcagaatcaaatgatagaaaggcttttgaagatgagatacaaagtagcttaacctccattcttgctttggatgacagcagaagagctgcattccagctaactcacgaggaggagcagcaaaatgttgctgagaaatggatacacatgtttcgtgctttgattgatgagagaggtccatggtctgcgaacccttttccaaatagtgctgtaaggcattggaaacttgagaagatagaagatacctggcgacggagaccaaaactaagacagaattatcattttgatgaaaagttgtgccaaccttcatcctctgtctccagcattgagattacacctccttttaatgaaagtaaatctgcttttgttggtcacattcctgagcaaatgaagcggtttttgctaaaaggagtatggaagattactgatgaggggagctcagaacccaatgaaactgataccgagctctgtggacagaagccgtccatccacacagatacctcagacagccagacctcagaattagcaaaggacaccagtgattggatacaggagaggaaagattcgtcttccccttcacatgagacagaaactagtgaggttcttacatcagttccttgtgtacttgtatccccaaaaagaaaactagctggacatttggcggtcatgaaaaacgtcttgcatttctttggagaatttttggttgaaggtactggaggatcatccattttcagaaacttccctgcttcaagcaattttgatttgaccaaacctgatcaaaagcagaaatttataaaacaaccaatatgctttggtttggatgcctcgaagggcaccatggttcagaaatttgaggcaataggtgaaaatgttctcaaaagaaaggagctaaaaaatattaaacgccacaggaggtggaacatgggcaagatcaaatctgtttgttggacgcgttatttgcttcggtatactgcaatagagattttcttctgcgattcatctgcaccgatatttttgaattttgcatcacagaaggatgcaaaagatattggaaccttaatagttgctaccaggaacgaatatttgtttccaaaaggaagtggtagggataaaagtggagctatttcatttgttgatagacgtgtatccttggaaatggcagaagctgcccgagagagctggaggagaagggatatgacaaattttgaatatctaatgatccttaatacgctggctggaaggtcttataatgatttgacacaatatcctgtgtttccttgggtcttggctgattattcctcggaggttcttgatttcaacaagtcttcaacctttcgggatctttcaaaaccagttggagcacttgatttaaaacgatttgaggtgtttgaagatagatatcgtagctttactgatcctgatatacctagtttctactatgggtctcattattcaagcatggggatagtgctttattaccttctcagattagagccatttacttctctccatcgcaatttgcagggtggtaaatttgaccatgcagatcgtctctttcaaagcattgagtcaacttatcagaactgcctttctaatacaagtgatgtgaaggagttaatacctgagttcttttatatgccagagtttcttgtgaattcaaactcctatcatttaggggtgaaacaagatggtgaacctattggagatgtttgtctccctccctgggccaagggctcacctgaagaatttgttaacaagaacagagaggcccttgaaagtgaatatgttagctctaatctacaccattggatagatttagtatttggttacaaacagcgtggaaaacctgctgtggaggcagcaaatattttttattacttgacctatgaaggcgctgttgatctggacaccatggaagacgatttacaaagatcagcaattgaagaccaaattgcaaattttggacaaacaccaattcagattttccgtaaaaaacacccaagaagaggaccacccattccaattgctcatcctctgcgctttgcacctagttctattaacatgacttccattgttagtagtgcaagtcaaccaaggttgtcttcattgtatattcgtacagtggactcaaatattgttgttgtaaaccaggggctcaccttgtcagttaagatgtggttgacatcctcactgcaatctggtggaaattttaccttctctggctcccaggatccttcttttggcattggttctgatgtcctttctccgcgtaaaattgggagtccttctgctgaaaatgttgaacttggaccacaatgcttcgcaacaatgcaaacagcatcggagaattttttgatctcatgtggcaattgggaaaatagctttcaggttatatccttgaatgatggcagagtggtgcaaagcatcaggcagcatagggatgtggtcagttgtgttgcagtaacatctgatggacgcttccttgcgactggaagttatgacactacaatcatggtctgggaagttttccgaggtagaacacaagaaaagagaccacgtaatacacagacggaactaccccgtaaagattatgtcattgttgaaactccttttcgtattctgtgcggacacgatgatataattacatgcttatatatcagtgtagagcttgacatagttatcagtggatcgaaagatggaacatgtgtttttcataccctgcagaagggaagatatgtaagatccgtgcgacatccatctggatgtgcgttatcaaagcttgttgcctctcggcatggaaggatagtgttttacgcagatggtgatctcagtttgcatctttattcaattaatggtaaacatcttgcttcttctgaatccaatggccgcctcaactgtgttgagctgagtgggtgtgaggaatttttggtttgtgctggtgaccacgggcaaatagttgtacgctccatgaattcacttgaggtcataaagaaatataatggagctggaaagatcataacatctctaacagtgaccccagaagaatgcttcttagctggaacaaaagacggaacccttcttgtgattgatcattcctttgcacttgaagtcatgcagctaaaaaggcgagcaatgatcaatgatgtaaatcccagcaagatgtgcatctgtcgtaatataacattgttgaagagaagtaccacatga
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

3466

Amino Acids

387.92

Weight (kDa)

6.1

Isoelectric Point (pI)

45.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 4884, 7988, 8442
AatII GACGTC 1 cut(s) 499
Acc16I TGCGCA 2 cut(s) 242, 1045
Acc36I ACCTGC 2 cut(s) 5219, 9049
Acc65I GGTACC 1 cut(s) 3213
AccB1I GGYRCC 6 cut(s) 118, 331, 3213, 4103, 5952, 8027
AccB7I CCANNNNNTGG 3 cut(s) 165, 6632, 7737
AccBSI CCGCTC 1 cut(s) 1893
AccI GTMKAC 3 cut(s) 666, 1230, 8162
AccII CGCG 4 cut(s) 446, 6802, 8146, 9463
AcoI YGGCCR 4 cut(s) 874, 3755, 5461, 10078
AcvI CACGTG 1 cut(s) 6647
AcyI GRCGYC 3 cut(s) 119, 496, 4104
AflII CTTAAG 4 cut(s) 1360, 1883, 2086, 2570
AflIII ACRYGT 7 cut(s) 2264, 4260, 4905, 7341, 8144, 8335, 9896
AhdI GACNNNNNGTC 2 cut(s) 3825, 3923
AhlI ACTAGT 1 cut(s) 7787
AjiI CACGTC 2 cut(s) 3349, 8336
AjuI GAANNNNNNNTTGG 6 cut(s) 1770, 1802, 6804, 6836, 9280, 9312
AloI GAACNNNNNNTCC 2 cut(s) 1467, 1499
Alw21I GWGCWC 8 cut(s) 487, 2482, 5176, 6646, 6940, 7634, 7662, 8557
Alw44I GTGCAC 1 cut(s) 2478
AlwNI CAGNNNCTG 4 cut(s) 710, 740, 2237, 8360
Ama87I CYCGRG 4 cut(s) 49, 480, 4477, 8364
ApaI GGGCCC 1 cut(s) 4122
ApaLI GTGCAC 1 cut(s) 2478
ArsI GACNNNNNNTTYG 5 cut(s) 31, 1611, 1643, 8134, 8166
AseI ATTAAT 4 cut(s) 1004, 3428, 3545, 10044
Asp700I GAANNNNTTC 6 cut(s) 909, 2216, 2296, 2652, 5223, 8064
Asp718I GGTACC 1 cut(s) 3213
AsuC2I CCSGG 6 cut(s) 138, 549, 2960, 6107, 6177, 6284
AsuII TTCGAA 2 cut(s) 3610, 4145
AsuNHI GCTAGC 1 cut(s) 5576
AvaI CYCGRG 4 cut(s) 49, 480, 4477, 8364
AxyI CCTNAGG 2 cut(s) 2279, 5141
BaeGI GKGCMC 3 cut(s) 2482, 4122, 8030
BaeI ACNNNNGTAYC 4 cut(s) 964, 997, 7328, 7361
BalI TGGCCA 2 cut(s) 876, 3757
BamHI GGATCC 3 cut(s) 5755, 7061, 9424
BanI GGYRCC 6 cut(s) 118, 331, 3213, 4103, 5952, 8027
BanII GRGCYC 9 cut(s) 481, 487, 2405, 4122, 5176, 7634, 7662, 8930, 9351
BarI GAAGNNNNNNTAC 6 cut(s) 5211, 5243, 7218, 7250, 9102, 9134
BauI CACGAG 5 cut(s) 56, 1443, 1721, 2562, 7301
BbrPI CACGTG 1 cut(s) 6647
BbsI GAAGAC 9 cut(s) 1094, 3351, 5102, 6774, 7755, 8511, 9117, 9144, 9288
Bbv12I GWGCWC 8 cut(s) 487, 2482, 5176, 6646, 6940, 7634, 7662, 8557
BbvCI CCTCAGC 1 cut(s) 4743
BceAI ACGGC 5 cut(s) 93, 554, 1014, 5476, 7660
BcgI CGANNNNNNTGC 6 cut(s) 3441, 3475, 6947, 6981, 8177, 8211
BciVI GTATCC 5 cut(s) 965, 7329, 7734, 7834, 8350
BclI TGATCA 6 cut(s) 3351, 6048, 6225, 7969, 10282, 10329
BcnI CCSGG 6 cut(s) 138, 549, 2960, 6107, 6177, 6284
BcuI ACTAGT 1 cut(s) 7787
BfoI RGCGCY 3 cut(s) 122, 4107, 9090
BfrI CTTAAG 4 cut(s) 1360, 1883, 2086, 2570
BfuAI ACCTGC 2 cut(s) 5219, 9049
BfuI GTATCC 5 cut(s) 965, 7329, 7734, 7834, 8350
BglII AGATCT 2 cut(s) 1559, 2672
BmcAI AGTACT 2 cut(s) 1138, 7095
BmeRI GACNNNNNGTC 2 cut(s) 3825, 3923
BmeT110I CYCGRG 4 cut(s) 49, 480, 4477, 8364
BmgBI CACGTC 2 cut(s) 3349, 8336
BmrI ACTGGG 3 cut(s) 685, 4540, 4724
BmtI GCTAGC 1 cut(s) 5580
BmuI ACTGGG 3 cut(s) 685, 4540, 4724
BoxI GACNNNNGTC 1 cut(s) 5638
BpiI GAAGAC 9 cut(s) 1094, 3351, 5102, 6774, 7755, 8511, 9117, 9144, 9288
BplI GAGNNNNNCTC 4 cut(s) 2732, 2764, 7616, 7648
BpmI CTGGAG 8 cut(s) 361, 2271, 3002, 5835, 7159, 7498, 7929, 8395
Bpu10I CCTNAGC 3 cut(s) 4371, 4743, 7575
Bpu14I TTCGAA 2 cut(s) 3610, 4145
BpuEI CTTGAG 5 cut(s) 632, 1845, 3244, 7442, 10193
BpuMI CCSGG 6 cut(s) 138, 549, 2960, 6107, 6177, 6284
Bsa29I ATCGAT 2 cut(s) 6138, 6315
BsaAI YACGTR 3 cut(s) 2932, 6647, 9752
BsaHI GRCGYC 3 cut(s) 119, 496, 4104
BsaI GGTCTC 5 cut(s) 317, 5071, 7444, 8643, 9739
BsaWI WCCGGW 2 cut(s) 246, 7058
BsaXI ACNNNNNCTCC 2 cut(s) 5634, 5664
Bse118I RCCGGY 1 cut(s) 4959
Bse21I CCTNAGG 2 cut(s) 2279, 5141
Bse3DI GCAATG 9 cut(s) 1815, 3175, 3221, 4478, 5151, 6765, 6893, 7051, 10332
BseCI ATCGAT 2 cut(s) 6138, 6315
BseMI GCAATG 9 cut(s) 1815, 3175, 3221, 4478, 5151, 6765, 6893, 7051, 10332
BseSI GKGCMC 3 cut(s) 2482, 4122, 8030
BseYI CCCAGC 2 cut(s) 6358, 10346
BsgI GTGCAG 2 cut(s) 4910, 8181
Bsh1236I CGCG 4 cut(s) 446, 6802, 8146, 9463
Bsh1285I CGRYCG 1 cut(s) 5450
BshNI GGYRCC 6 cut(s) 118, 331, 3213, 4103, 5952, 8027
BshVI ATCGAT 2 cut(s) 6138, 6315
BsiEI CGRYCG 1 cut(s) 5450
BsiHKAI GWGCWC 8 cut(s) 487, 2482, 5176, 6646, 6940, 7634, 7662, 8557
BsiHKCI CYCGRG 4 cut(s) 49, 480, 4477, 8364
BslFI GGGAC 9 cut(s) 249, 531, 2260, 3702, 3832, 5428, 6122, 6299, 6597
BsmBI CGTCTC 4 cut(s) 2172, 4474, 5960, 8750
BsmFI GGGAC 9 cut(s) 249, 531, 2260, 3702, 3832, 5428, 6122, 6299, 6597
Bso31I GGTCTC 5 cut(s) 317, 5071, 7444, 8643, 9739
BsoBI CYCGRG 4 cut(s) 49, 480, 4477, 8364
Bsp119I TTCGAA 2 cut(s) 3610, 4145
Bsp120I GGGCCC 1 cut(s) 4118
Bsp1407I TGTACA 3 cut(s) 2261, 4094, 4872
Bsp19I CCATGG 4 cut(s) 2724, 7373, 8031, 9105
Bsp68I TCGCGA 1 cut(s) 6802
BspDI ATCGAT 2 cut(s) 6138, 6315
BspFNI CGCG 4 cut(s) 446, 6802, 8146, 9463
BspHI TCATGA 5 cut(s) 1939, 2016, 2868, 3732, 7860
BspMAI CTGCAG 8 cut(s) 76, 2112, 3378, 3936, 6682, 6694, 7201, 9918
BspMI ACCTGC 2 cut(s) 5219, 9049
BspOI GCTAGC 1 cut(s) 5580
BspQI GCTCTTC 5 cut(s) 933, 1842, 3374, 3985, 7273
BspT104I TTCGAA 2 cut(s) 3610, 4145
BspT107I GGYRCC 6 cut(s) 118, 331, 3213, 4103, 5952, 8027
BspTI CTTAAG 4 cut(s) 1360, 1883, 2086, 2570
BspTNI GGTCTC 5 cut(s) 317, 5071, 7444, 8643, 9739
BsrBI CCGCTC 1 cut(s) 1893
BsrDI GCAATG 9 cut(s) 1815, 3175, 3221, 4478, 5151, 6765, 6893, 7051, 10332
BsrFI RCCGGY 1 cut(s) 4959
BsrGI TGTACA 3 cut(s) 2261, 4094, 4872
BssAI RCCGGY 1 cut(s) 4959
BssNAI GTATAC 2 cut(s) 667, 8163
BssNI GRCGYC 3 cut(s) 119, 496, 4104
BssSI CACGAG 5 cut(s) 56, 1443, 1721, 2562, 7301
Bst1107I GTATAC 2 cut(s) 667, 8163
Bst2BI CACGAG 5 cut(s) 56, 1443, 1721, 2562, 7301
BstACI GRCGYC 3 cut(s) 119, 496, 4104
BstAFI CTTAAG 4 cut(s) 1360, 1883, 2086, 2570
BstAPI GCANNNNNTGC 4 cut(s) 3013, 7106, 8360, 10356
BstAUI TGTACA 3 cut(s) 2261, 4094, 4872
BstBAI YACGTR 3 cut(s) 2932, 6647, 9752
BstBI TTCGAA 2 cut(s) 3610, 4145
BstDSI CCRYGG 6 cut(s) 1080, 2724, 7373, 8031, 9105, 10138
BstEII GGTNACC 2 cut(s) 3095, 10133
BstENI CCTNNNNNAGG 2 cut(s) 5282, 9917
BstFNI CGCG 4 cut(s) 446, 6802, 8146, 9463
BstH2I RGCGCY 3 cut(s) 122, 4107, 9090
BstMCI CGRYCG 1 cut(s) 5450
BstNSI RCATGY 9 cut(s) 734, 1598, 2268, 4264, 4909, 5038, 7345, 9843, 9900
BstPAI GACNNNNGTC 1 cut(s) 5638
BstPI GGTNACC 2 cut(s) 3095, 10133
BstSLI GKGCMC 3 cut(s) 2482, 4122, 8030
BstUI CGCG 4 cut(s) 446, 6802, 8146, 9463
BstV2I GAAGAC 9 cut(s) 1094, 3351, 5102, 6774, 7755, 8511, 9117, 9144, 9288
BstZ17I GTATAC 2 cut(s) 667, 8163
Bsu15I ATCGAT 2 cut(s) 6138, 6315
Bsu36I CCTNAGG 2 cut(s) 2279, 5141
BsuI GTATCC 5 cut(s) 965, 7329, 7734, 7834, 8350
BsuTUI ATCGAT 2 cut(s) 6138, 6315
BtgI CCRYGG 6 cut(s) 1080, 2724, 7373, 8031, 9105, 10138
BtgZI GCGATG 3 cut(s) 6783, 6817, 8690
BtrI CACGTC 2 cut(s) 3349, 8336
BtsI GCAGTG 6 cut(s) 2100, 3391, 5261, 5996, 6724, 9383
BtuMI TCGCGA 1 cut(s) 6802
BveI ACCTGC 2 cut(s) 5219, 9049
CaiI CAGNNNCTG 4 cut(s) 710, 740, 2237, 8360
CciI TCATGA 5 cut(s) 1939, 2016, 2868, 3732, 7860
Cfr10I RCCGGY 1 cut(s) 4959
ClaI ATCGAT 2 cut(s) 6138, 6315
CseI GACGC 6 cut(s) 3358, 3451, 4491, 6796, 8152, 9678
CspCI CAANNNNNGTGG 4 cut(s) 5536, 5571, 9013, 9048
DinI GGCGCC 2 cut(s) 120, 4105
DraI TTTAAA 5 cut(s) 1462, 2076, 2542, 4585, 8565
DriI GACNNNNNGTC 2 cut(s) 3825, 3923
EaeI YGGCCR 4 cut(s) 874, 3755, 5461, 10078
Eam1105I GACNNNNNGTC 2 cut(s) 3825, 3923
Ecl136II GAGCTC 4 cut(s) 485, 5174, 7632, 7660
Eco147I AGGCCT 2 cut(s) 353, 2054
Eco24I GRGCYC 9 cut(s) 481, 487, 2405, 4122, 5176, 7634, 7662, 8930, 9351
Eco31I GGTCTC 5 cut(s) 317, 5071, 7444, 8643, 9739
Eco32I GATATC 2 cut(s) 596, 8594
Eco53kI GAGCTC 4 cut(s) 485, 5174, 7632, 7660
Eco72I CACGTG 1 cut(s) 6647
Eco81I CCTNAGG 2 cut(s) 2279, 5141
Eco88I CYCGRG 4 cut(s) 49, 480, 4477, 8364
Eco91I GGTNACC 2 cut(s) 3095, 10133
EcoICRI GAGCTC 4 cut(s) 485, 5174, 7632, 7660
EcoNI CCTNNNNNAGG 2 cut(s) 5282, 9917
EcoO109I RGGNCCY 4 cut(s) 3689, 4119, 5442, 8962
EcoO65I GGTNACC 2 cut(s) 3095, 10133
EcoRI GAATTC 4 cut(s) 1153, 1413, 8848, 10165
EcoRV GATATC 2 cut(s) 596, 8594
EcoT22I ATGCAT 5 cut(s) 2131, 2152, 2714, 4426, 4692
EcoT38I GRGCYC 9 cut(s) 481, 487, 2405, 4122, 5176, 7634, 7662, 8930, 9351
EgeI GGCGCC 2 cut(s) 120, 4105
EheI GGCGCC 2 cut(s) 120, 4105
Esp3I CGTCTC 4 cut(s) 2172, 4474, 5960, 8750
FalI AAGNNNNNCTT 4 cut(s) 4323, 4355, 9280, 9312
FaqI GGGAC 9 cut(s) 249, 531, 2260, 3702, 3832, 5428, 6122, 6299, 6597
FauI CCCGC 2 cut(s) 784, 3196
FauNDI CATATG 2 cut(s) 5232, 5637
FbaI TGATCA 6 cut(s) 3351, 6048, 6225, 7969, 10282, 10329
FblI GTMKAC 3 cut(s) 666, 1230, 8162
FriOI GRGCYC 9 cut(s) 481, 487, 2405, 4122, 5176, 7634, 7662, 8930, 9351
FspI TGCGCA 2 cut(s) 242, 1045
GsaI CCCAGC 2 cut(s) 6362, 10350
GsuI CTGGAG 8 cut(s) 361, 2271, 3002, 5835, 7159, 7498, 7929, 8395
HaeII RGCGCY 3 cut(s) 122, 4107, 9090
HgaI GACGC 6 cut(s) 3358, 3451, 4491, 6796, 8152, 9678
Hin1I GRCGYC 3 cut(s) 119, 496, 4104
HincII GTYRAC 7 cut(s) 1231, 1783, 5805, 8766, 8947, 9284, 9375
HindII GTYRAC 7 cut(s) 1231, 1783, 5805, 8766, 8947, 9284, 9375
HindIII AAGCTT 7 cut(s) 1357, 2510, 3887, 5378, 5772, 5819, 9971
HpaI GTTAAC 2 cut(s) 5805, 8947
Hpy99I CGWCG 1 cut(s) 7449
Hsp92I GRCGYC 3 cut(s) 119, 496, 4104
KasI GGCGCC 2 cut(s) 118, 4103
KpnI GGTACC 1 cut(s) 3217
KroI GCCGGC 1 cut(s) 4959
KroNI GCCGGC 1 cut(s) 4961
Ksp22I TGATCA 6 cut(s) 3351, 6048, 6225, 7969, 10282, 10329
KspAI GTTAAC 2 cut(s) 5805, 8947
LguI GCTCTTC 5 cut(s) 933, 1842, 3374, 3985, 7273
MbiI CCGCTC 1 cut(s) 1893
MfeI CAATTG 3 cut(s) 9132, 9216, 9562
MlsI TGGCCA 2 cut(s) 876, 3757
MluI ACGCGT 1 cut(s) 8144
MluNI TGGCCA 2 cut(s) 876, 3757
Mly113I GGCGCC 2 cut(s) 119, 4104
Mox20I TGGCCA 2 cut(s) 876, 3757
Mph1103I ATGCAT 5 cut(s) 2131, 2152, 2714, 4426, 4692
MroNI GCCGGC 1 cut(s) 4959
MroXI GAANNNNTTC 6 cut(s) 909, 2216, 2296, 2652, 5223, 8064
MscI TGGCCA 2 cut(s) 876, 3757
MslI CAYNNNNRTG 4 cut(s) 6802, 7479, 9633, 9955
Msp20I TGGCCA 2 cut(s) 876, 3757
MspA1I CMGCKG 7 cut(s) 1055, 1591, 2519, 3931, 6848, 6880, 7159
MspCI CTTAAG 4 cut(s) 1360, 1883, 2086, 2570
MunI CAATTG 3 cut(s) 9132, 9216, 9562
MvnI CGCG 4 cut(s) 446, 6802, 8146, 9463
NaeI GCCGGC 1 cut(s) 4961
NarI GGCGCC 2 cut(s) 119, 4104
NciI CCSGG 6 cut(s) 138, 549, 2960, 6107, 6177, 6284
NcoI CCATGG 4 cut(s) 2724, 7373, 8031, 9105
NdeI CATATG 2 cut(s) 5232, 5637
NgoMIV GCCGGC 1 cut(s) 4959
NheI GCTAGC 1 cut(s) 5576
NmeAIII GCCGAG 1 cut(s) 9964
NruI TCGCGA 1 cut(s) 6802
NsbI TGCGCA 2 cut(s) 242, 1045
NsiI ATGCAT 5 cut(s) 2131, 2152, 2714, 4426, 4692
NspI RCATGY 9 cut(s) 734, 1598, 2268, 4264, 4909, 5038, 7345, 9843, 9900
NspV TTCGAA 2 cut(s) 3610, 4145
PaeR7I CTCGAG 3 cut(s) 49, 480, 4477
PagI TCATGA 5 cut(s) 1939, 2016, 2868, 3732, 7860
PasI CCCWGGG 1 cut(s) 8916
PceI AGGCCT 2 cut(s) 353, 2054
PciI ACATGT 5 cut(s) 2264, 4260, 4905, 7341, 9896
PciSI GCTCTTC 5 cut(s) 933, 1842, 3374, 3985, 7273
PdiI GCCGGC 1 cut(s) 4961
PdmI GAANNNNTTC 6 cut(s) 909, 2216, 2296, 2652, 5223, 8064
PflFI GACNNNGTC 1 cut(s) 440
PflMI CCANNNNNTGG 3 cut(s) 165, 6632, 7737
PfoI TCCNGGA 1 cut(s) 7175
Ple19I CGATCG 1 cut(s) 5450
PluTI GGCGCC 2 cut(s) 122, 4107
PmaCI CACGTG 1 cut(s) 6647
PmlI CACGTG 1 cut(s) 6647
Ppu21I YACGTR 3 cut(s) 2932, 6647, 9752
PpuMI RGGWCCY 2 cut(s) 3689, 5442
PscI ACATGT 5 cut(s) 2264, 4260, 4905, 7341, 9896
PshAI GACNNNNGTC 1 cut(s) 5638
PshBI ATTAAT 4 cut(s) 1004, 3428, 3545, 10044
PsiI TTATAA 3 cut(s) 4884, 7988, 8442
Psp124BI GAGCTC 4 cut(s) 487, 5176, 7634, 7662
Psp5II RGGWCCY 2 cut(s) 3689, 5442
PspCI CACGTG 1 cut(s) 6647
PspEI GGTNACC 2 cut(s) 3095, 10133
PspFI CCCAGC 2 cut(s) 6358, 10346
PspOMI GGGCCC 1 cut(s) 4118
PspPPI RGGWCCY 2 cut(s) 3689, 5442
PspXI VCTCGAGB 2 cut(s) 49, 480
PsrI GAACNNNNNNTAC 2 cut(s) 1783, 1815
PstI CTGCAG 8 cut(s) 76, 2112, 3378, 3936, 6682, 6694, 7201, 9918
PstNI CAGNNNCTG 4 cut(s) 710, 740, 2237, 8360
PsyI GACNNNGTC 1 cut(s) 440
PvuI CGATCG 1 cut(s) 5450
PvuII CAGCTG 7 cut(s) 1055, 1591, 2519, 3931, 6848, 6880, 7159
RruI TCGCGA 1 cut(s) 6802
RseI CAYNNNNRTG 4 cut(s) 6802, 7479, 9633, 9955
SacI GAGCTC 4 cut(s) 487, 5176, 7634, 7662
SalI GTCGAC 1 cut(s) 1229
SapI GCTCTTC 5 cut(s) 933, 1842, 3374, 3985, 7273
ScaI AGTACT 2 cut(s) 1138, 7095
SfoI GGCGCC 2 cut(s) 120, 4105
Sfr274I CTCGAG 3 cut(s) 49, 480, 4477
SfuI TTCGAA 2 cut(s) 3610, 4145
SlaI CTCGAG 3 cut(s) 49, 480, 4477
SmiMI CAYNNNNRTG 4 cut(s) 6802, 7479, 9633, 9955
SpeI ACTAGT 1 cut(s) 7787
SseBI AGGCCT 2 cut(s) 353, 2054
SspDI GGCGCC 2 cut(s) 118, 4103
SspI AATATT 5 cut(s) 1269, 8092, 8276, 9061, 9328
SstI GAGCTC 4 cut(s) 487, 5176, 7634, 7662
StuI AGGCCT 2 cut(s) 353, 2054
TaqII GACCGA 2 cut(s) 533, 6601
TatI WGTACW 7 cut(s) 848, 1136, 2261, 4094, 4872, 7093, 7816
TauI GCSGC 2 cut(s) 3872, 10083
TspGWI ACGGA 7 cut(s) 4892, 6342, 7462, 9170, 9779, 9928, 10278
Tth111I GACNNNGTC 1 cut(s) 440
Van91I CCANNNNNTGG 3 cut(s) 165, 6632, 7737
Vha464I CTTAAG 4 cut(s) 1360, 1883, 2086, 2570
VneI GTGCAC 1 cut(s) 2478
VspI ATTAAT 4 cut(s) 1004, 3428, 3545, 10044
XagI CCTNNNNNAGG 2 cut(s) 5282, 9917
XceI RCATGY 9 cut(s) 734, 1598, 2268, 4264, 4909, 5038, 7345, 9843, 9900
XcmI CCANNNNNNNNNTGG 2 cut(s) 6413, 7261
XhoI CTCGAG 3 cut(s) 49, 480, 4477
XmiI GTMKAC 3 cut(s) 666, 1230, 8162
XmnI GAANNNNTTC 6 cut(s) 909, 2216, 2296, 2652, 5223, 8064
ZraI GACGTC 1 cut(s) 497
ZrmI AGTACT 2 cut(s) 1138, 7095
Zsp2I ATGCAT 5 cut(s) 2131, 2152, 2714, 4426, 4692
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.