DnaJ domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G01710 AT2G01710 |
| fragaria_vesca | FvH4_5g35420 |
| malus_domestica | MD08G1196700.v1.1 MD15G1301600.v1.1 MD15G1384400.v1.1 |
| prunus_persica | Prupe.1G531000_v2.0.a1 |
| pyrus_communis | pycom08g16900 pycom15g34460 |
| rosa_chinensis | RchiOBHm_Chr7g0236821 |
| rosa_laevigata | RLG00000001059 |
| rosa_multiflora | Rmu_sc0002867.1_g000022 Rmu_sc0008851.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00224800 |
| rosa_rugosa | Rorug07G0299600 |
| rosa_samantha | Rh7AG454800 Rh7BG426000 Rh7CG473400 Rh7DG442700 |
| rosa_wichuraiana | Rw7G037750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 165 |
| AccI | GTMKAC | 1 cut(s) | 159 |
| AccII | CGCG | 6 cut(s) | 90, 186, 431, 776, 887, 973 |
| AclWI | GGATC | 2 cut(s) | 228, 234 |
| AcoI | YGGCCR | 4 cut(s) | 150, 682, 882, 968 |
| AcsI | RAATTY | 3 cut(s) | 661, 910, 931 |
| AcyI | GRCGYC | 1 cut(s) | 162 |
| AfaI | GTAC | 4 cut(s) | 209, 266, 308, 587 |
| AfeI | AGCGCT | 1 cut(s) | 35 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 274, 348, 379, 891, 954 |
| AgsI | TTSAA | 2 cut(s) | 811, 910 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 558 |
| AjnI | CCWGG | 3 cut(s) | 589, 684, 848 |
| AluBI | AGCT | 8 cut(s) | 58, 84, 223, 397, 440, 457, 546, 741 |
| AluI | AGCT | 8 cut(s) | 58, 84, 223, 397, 440, 457, 546, 741 |
| Alw21I | GWGCWC | 1 cut(s) | 399 |
| AlwI | GGATC | 2 cut(s) | 228, 234 |
| Aor51HI | AGCGCT | 1 cut(s) | 35 |
| AoxI | GGCC | 8 cut(s) | 150, 351, 432, 682, 780, 852, 882, 968 |
| ApeKI | GCWGC | 8 cut(s) | 280, 283, 511, 514, 702, 738, 770, 868 |
| ApoI | RAATTY | 3 cut(s) | 661, 910, 931 |
| AspLEI | GCGC | 5 cut(s) | 36, 186, 280, 431, 877 |
| AspS9I | GGNCC | 3 cut(s) | 351, 852, 945 |
| AsuC2I | CCSGG | 3 cut(s) | 293, 373, 413 |
| AsuHPI | GGTGA | 2 cut(s) | 415, 908 |
| AsuII | TTCGAA | 1 cut(s) | 642 |
| AvaII | GGWCC | 1 cut(s) | 945 |
| BalI | TGGCCA | 1 cut(s) | 684 |
| BanII | GRGCYC | 1 cut(s) | 399 |
| Bbv12I | GWGCWC | 1 cut(s) | 399 |
| BbvCI | CCTCAGC | 1 cut(s) | 436 |
| BbvI | GCAGC | 8 cut(s) | 267, 270, 523, 526, 689, 750, 757, 880 |
| BccI | CCATC | 1 cut(s) | 893 |
| BceAI | ACGGC | 7 cut(s) | 137, 148, 287, 338, 508, 570, 632 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 464, 498 |
| BciT130I | CCWGG | 3 cut(s) | 591, 686, 850 |
| BclI | TGATCA | 1 cut(s) | 252 |
| BcnI | CCSGG | 3 cut(s) | 293, 373, 413 |
| BfmI | CTRYAG | 1 cut(s) | 406 |
| BfoI | RGCGCY | 2 cut(s) | 37, 281 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 779 |
| BglII | AGATCT | 2 cut(s) | 73, 144 |
| BlpI | GCTNAGC | 1 cut(s) | 742 |
| Bme1390I | CCNGG | 6 cut(s) | 293, 373, 413, 591, 686, 850 |
| Bme18I | GGWCC | 1 cut(s) | 945 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 558 |
| BmgT120I | GGNCC | 3 cut(s) | 351, 852, 945 |
| BmiI | GGNNCC | 4 cut(s) | 136, 507, 657, 946 |
| BmrFI | CCNGG | 6 cut(s) | 293, 373, 413, 591, 686, 850 |
| BmsI | GCATC | 3 cut(s) | 334, 679, 786 |
| BpmI | CTGGAG | 1 cut(s) | 203 |
| Bpu10I | CCTNAGC | 2 cut(s) | 436, 840 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 742 |
| Bpu14I | TTCGAA | 1 cut(s) | 642 |
| BpuEI | CTTGAG | 1 cut(s) | 93 |
| BpuMI | CCSGG | 3 cut(s) | 293, 373, 413 |
| BsaHI | GRCGYC | 1 cut(s) | 162 |
| BsaJI | CCNNGG | 9 cut(s) | 589, 590, 648, 720, 774, 849, 885, 953, 971 |
| BsaWI | WCCGGW | 1 cut(s) | 460 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 274, 348, 379, 891, 954 |
| Bse118I | RCCGGY | 3 cut(s) | 379, 425, 877 |
| Bse1I | ACTGG | 1 cut(s) | 209 |
| BseBI | CCWGG | 3 cut(s) | 591, 686, 850 |
| BseDI | CCNNGG | 9 cut(s) | 589, 590, 648, 720, 774, 849, 885, 953, 971 |
| BseGI | GGATG | 2 cut(s) | 694, 801 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 274, 348, 379, 891, 954 |
| BseMII | CTCAG | 4 cut(s) | 450, 756, 831, 839 |
| BseNI | ACTGG | 1 cut(s) | 209 |
| BseX3I | CGGCCG | 1 cut(s) | 968 |
| BseXI | GCAGC | 8 cut(s) | 267, 270, 523, 526, 689, 750, 757, 880 |
| BseYI | CCCAGC | 1 cut(s) | 705 |
| Bsh1236I | CGCG | 6 cut(s) | 90, 186, 431, 776, 887, 973 |
| Bsh1285I | CGRYCG | 2 cut(s) | 417, 971 |
| BshFI | GGCC | 8 cut(s) | 152, 353, 434, 684, 782, 854, 884, 970 |
| BsiEI | CGRYCG | 2 cut(s) | 417, 971 |
| BsiHKAI | GWGCWC | 1 cut(s) | 399 |
| BsiSI | CCGG | 8 cut(s) | 293, 331, 373, 380, 413, 426, 461, 878 |
| BslFI | GGGAC | 2 cut(s) | 952, 958 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 274, 348, 379, 891, 954 |
| BsmFI | GGGAC | 2 cut(s) | 952, 958 |
| BsmI | GAATGC | 1 cut(s) | 484 |
| BsnI | GGCC | 8 cut(s) | 152, 353, 434, 684, 782, 854, 884, 970 |
| Bsp119I | TTCGAA | 1 cut(s) | 642 |
| Bsp1286I | GDGCHC | 1 cut(s) | 399 |
| Bsp143I | GATC | 9 cut(s) | 73, 139, 144, 226, 233, 247, 252, 319, 418 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 742 |
| Bsp19I | CCATGG | 1 cut(s) | 720 |
| BspANI | GGCC | 8 cut(s) | 152, 353, 434, 684, 782, 854, 884, 970 |
| BspCNI | CTCAG | 4 cut(s) | 449, 755, 832, 838 |
| BspFNI | CGCG | 6 cut(s) | 90, 186, 431, 776, 887, 973 |
| BspLI | GGNNCC | 4 cut(s) | 136, 507, 657, 946 |
| BspPI | GGATC | 2 cut(s) | 228, 234 |
| BspT104I | TTCGAA | 1 cut(s) | 642 |
| BsrFI | RCCGGY | 3 cut(s) | 379, 425, 877 |
| BsrI | ACTGG | 1 cut(s) | 209 |
| BssAI | RCCGGY | 3 cut(s) | 379, 425, 877 |
| BssECI | CCNNGG | 9 cut(s) | 589, 590, 648, 720, 774, 849, 885, 953, 971 |
| BssMI | GATC | 9 cut(s) | 73, 139, 144, 226, 233, 247, 252, 319, 418 |
| BssNI | GRCGYC | 1 cut(s) | 162 |
| BssT1I | CCWWGG | 1 cut(s) | 720 |
| Bst2UI | CCWGG | 3 cut(s) | 591, 686, 850 |
| Bst4CI | ACNGT | 3 cut(s) | 569, 579, 629 |
| Bst6I | CTCTTC | 1 cut(s) | 953 |
| BstACI | GRCGYC | 1 cut(s) | 162 |
| BstBI | TTCGAA | 1 cut(s) | 642 |
| BstC8I | GCNNGC | 2 cut(s) | 276, 873 |
| BstDEI | CTNAG | 5 cut(s) | 169, 436, 742, 825, 840 |
| BstDSI | CCRYGG | 5 cut(s) | 648, 720, 774, 885, 971 |
| BstF5I | GGATG | 2 cut(s) | 694, 801 |
| BstFNI | CGCG | 6 cut(s) | 90, 186, 431, 776, 887, 973 |
| BstH2I | RGCGCY | 2 cut(s) | 37, 281 |
| BstHHI | GCGC | 5 cut(s) | 36, 186, 280, 431, 877 |
| BstKTI | GATC | 9 cut(s) | 76, 142, 147, 229, 236, 250, 255, 322, 421 |
| BstMBI | GATC | 9 cut(s) | 73, 139, 144, 226, 233, 247, 252, 319, 418 |
| BstMCI | CGRYCG | 2 cut(s) | 417, 971 |
| BstNI | CCWGG | 3 cut(s) | 591, 686, 850 |
| BstSCI | CCNGG | 6 cut(s) | 291, 371, 411, 589, 684, 848 |
| BstSFI | CTRYAG | 1 cut(s) | 406 |
| BstUI | CGCG | 6 cut(s) | 90, 186, 431, 776, 887, 973 |
| BstV1I | GCAGC | 8 cut(s) | 267, 270, 523, 526, 689, 750, 757, 880 |
| BstX2I | RGATCY | 2 cut(s) | 73, 144 |
| BstYI | RGATCY | 2 cut(s) | 73, 144 |
| BstZI | CGGCCG | 1 cut(s) | 968 |
| BsuRI | GGCC | 8 cut(s) | 152, 353, 434, 684, 782, 854, 884, 970 |
| BtgI | CCRYGG | 5 cut(s) | 648, 720, 774, 885, 971 |
| BtsCI | GGATG | 2 cut(s) | 694, 801 |
| Cac8I | GCNNGC | 2 cut(s) | 276, 873 |
| CciNI | GCGGCCGC | 1 cut(s) | 968 |
| CfoI | GCGC | 5 cut(s) | 36, 186, 280, 431, 877 |
| Cfr10I | RCCGGY | 3 cut(s) | 379, 425, 877 |
| Cfr13I | GGNCC | 3 cut(s) | 351, 852, 945 |
| Cfr42I | CCGCGG | 3 cut(s) | 777, 888, 974 |
| Csp6I | GTAC | 4 cut(s) | 208, 265, 307, 586 |
| CviAII | CATG | 3 cut(s) | 348, 680, 721 |
| CviQI | GTAC | 4 cut(s) | 208, 265, 307, 586 |
| DdeI | CTNAG | 5 cut(s) | 169, 436, 742, 825, 840 |
| DpnI | GATC | 9 cut(s) | 75, 141, 146, 228, 235, 249, 254, 321, 420 |
| DpnII | GATC | 9 cut(s) | 73, 139, 144, 226, 233, 247, 252, 319, 418 |
| DriI | GACNNNNNGTC | 1 cut(s) | 558 |
| EaeI | YGGCCR | 4 cut(s) | 150, 682, 882, 968 |
| EagI | CGGCCG | 1 cut(s) | 968 |
| Eam1104I | CTCTTC | 1 cut(s) | 953 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 558 |
| EarI | CTCTTC | 1 cut(s) | 953 |
| EciI | GGCGGA | 1 cut(s) | 810 |
| Ecl136II | GAGCTC | 1 cut(s) | 397 |
| EclXI | CGGCCG | 1 cut(s) | 968 |
| Eco130I | CCWWGG | 1 cut(s) | 720 |
| Eco147I | AGGCCT | 1 cut(s) | 782 |
| Eco24I | GRGCYC | 1 cut(s) | 399 |
| Eco47I | GGWCC | 1 cut(s) | 945 |
| Eco47III | AGCGCT | 1 cut(s) | 35 |
| Eco52I | CGGCCG | 1 cut(s) | 968 |
| Eco53kI | GAGCTC | 1 cut(s) | 397 |
| EcoICRI | GAGCTC | 1 cut(s) | 397 |
| EcoO109I | RGGNCCY | 1 cut(s) | 852 |
| EcoRII | CCWGG | 3 cut(s) | 589, 684, 848 |
| EcoT14I | CCWWGG | 1 cut(s) | 720 |
| EcoT22I | ATGCAT | 1 cut(s) | 349 |
| EcoT38I | GRGCYC | 1 cut(s) | 399 |
| ErhI | CCWWGG | 1 cut(s) | 720 |
| FaeI | CATG | 3 cut(s) | 351, 683, 724 |
| FaiI | YATR | 8 cut(s) | 349, 573, 575, 582, 600, 681, 722, 729 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 296, 328 |
| FaqI | GGGAC | 2 cut(s) | 952, 958 |
| FatI | CATG | 3 cut(s) | 347, 679, 720 |
| FauI | CCCGC | 2 cut(s) | 462, 796 |
| FbaI | TGATCA | 1 cut(s) | 252 |
| FblI | GTMKAC | 1 cut(s) | 159 |
| FokI | GGATG | 2 cut(s) | 701, 808 |
| FriOI | GRGCYC | 1 cut(s) | 399 |
| GlaI | GCGC | 5 cut(s) | 35, 185, 279, 430, 876 |
| GsaI | CCCAGC | 1 cut(s) | 709 |
| GsuI | CTGGAG | 1 cut(s) | 203 |
| HaeII | RGCGCY | 2 cut(s) | 37, 281 |
| HaeIII | GGCC | 8 cut(s) | 152, 353, 434, 684, 782, 854, 884, 970 |
| HapII | CCGG | 8 cut(s) | 293, 331, 373, 380, 413, 426, 461, 878 |
| HhaI | GCGC | 5 cut(s) | 36, 186, 280, 431, 877 |
| Hin1I | GRCGYC | 1 cut(s) | 162 |
| Hin1II | CATG | 3 cut(s) | 351, 683, 724 |
| Hin6I | GCGC | 5 cut(s) | 34, 184, 278, 429, 875 |
| HinP1I | GCGC | 5 cut(s) | 34, 184, 278, 429, 875 |
| HincII | GTYRAC | 1 cut(s) | 160 |
| HindII | GTYRAC | 1 cut(s) | 160 |
| HindIII | AAGCTT | 1 cut(s) | 455 |
| HinfI | GANTC | 2 cut(s) | 45, 711 |
| HpaII | CCGG | 8 cut(s) | 293, 331, 373, 380, 413, 426, 461, 878 |
| HphI | GGTGA | 2 cut(s) | 415, 908 |
| Hpy166II | GTNNAC | 2 cut(s) | 160, 190 |
| Hpy188III | TCNNGA | 4 cut(s) | 110, 256, 534, 550 |
| Hpy8I | GTNNAC | 2 cut(s) | 160, 190 |
| Hpy99I | CGWCG | 7 cut(s) | 158, 161, 164, 242, 273, 341, 494 |
| HpyAV | CCTTC | 5 cut(s) | 322, 337, 793, 855, 970 |
| HpyCH4III | ACNGT | 3 cut(s) | 569, 579, 629 |
| HpyCH4IV | ACGT | 1 cut(s) | 162 |
| HpyCH4V | TGCA | 2 cut(s) | 347, 679 |
| HpyF3I | CTNAG | 5 cut(s) | 169, 436, 742, 825, 840 |
| HpySE526I | ACGT | 1 cut(s) | 162 |
| Hsp92I | GRCGYC | 1 cut(s) | 162 |
| Hsp92II | CATG | 3 cut(s) | 351, 683, 724 |
| HspAI | GCGC | 5 cut(s) | 34, 184, 278, 429, 875 |
| Ksp22I | TGATCA | 1 cut(s) | 252 |
| KspI | CCGCGG | 3 cut(s) | 777, 888, 974 |
| Kzo9I | GATC | 9 cut(s) | 73, 139, 144, 226, 233, 247, 252, 319, 418 |
| LmnI | GCTCC | 3 cut(s) | 140, 291, 505 |
| Lsp1109I | GCAGC | 8 cut(s) | 267, 270, 523, 526, 689, 750, 757, 880 |
| LweI | GCATC | 3 cut(s) | 334, 679, 786 |
| MaeII | ACGT | 1 cut(s) | 162 |
| MalI | GATC | 9 cut(s) | 75, 141, 146, 228, 235, 249, 254, 321, 420 |
| MboI | GATC | 9 cut(s) | 73, 139, 144, 226, 233, 247, 252, 319, 418 |
| MboII | GAAGA | 2 cut(s) | 706, 970 |
| MflI | RGATCY | 2 cut(s) | 73, 144 |
| MhlI | GDGCHC | 1 cut(s) | 399 |
| MlsI | TGGCCA | 1 cut(s) | 684 |
| MluCI | AATT | 5 cut(s) | 126, 604, 661, 910, 931 |
| MluNI | TGGCCA | 1 cut(s) | 684 |
| MmeI | TCCRAC | 2 cut(s) | 261, 387 |
| Mox20I | TGGCCA | 1 cut(s) | 684 |
| Mph1103I | ATGCAT | 1 cut(s) | 349 |
| MscI | TGGCCA | 1 cut(s) | 684 |
| MseI | TTAA | 1 cut(s) | 62 |
| Msp20I | TGGCCA | 1 cut(s) | 684 |
| MspA1I | CMGCKG | 4 cut(s) | 223, 776, 887, 973 |
| MspI | CCGG | 8 cut(s) | 293, 331, 373, 380, 413, 426, 461, 878 |
| MspR9I | CCNGG | 6 cut(s) | 293, 373, 413, 591, 686, 850 |
| Mva1269I | GAATGC | 1 cut(s) | 484 |
| MvaI | CCWGG | 3 cut(s) | 591, 686, 850 |
| MvnI | CGCG | 6 cut(s) | 90, 186, 431, 776, 887, 973 |
| NciI | CCSGG | 3 cut(s) | 293, 373, 413 |
| NcoI | CCATGG | 1 cut(s) | 720 |
| NdeII | GATC | 9 cut(s) | 73, 139, 144, 226, 233, 247, 252, 319, 418 |
| NlaIII | CATG | 3 cut(s) | 351, 683, 724 |
| NlaIV | GGNNCC | 4 cut(s) | 136, 507, 657, 946 |
| NmeAIII | GCCGAG | 1 cut(s) | 55 |
| NotI | GCGGCCGC | 1 cut(s) | 968 |
| NsiI | ATGCAT | 1 cut(s) | 349 |
| NspV | TTCGAA | 1 cut(s) | 642 |
| PasI | CCCWGGG | 1 cut(s) | 590 |
| PceI | AGGCCT | 1 cut(s) | 782 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 48, 315, 495, 539 |
| PctI | GAATGC | 1 cut(s) | 484 |
| PfeI | GAWTC | 2 cut(s) | 45, 711 |
| Psp124BI | GAGCTC | 1 cut(s) | 399 |
| Psp6I | CCWGG | 3 cut(s) | 589, 684, 848 |
| PspFI | CCCAGC | 1 cut(s) | 705 |
| PspGI | CCWGG | 3 cut(s) | 589, 684, 848 |
| PspN4I | GGNNCC | 4 cut(s) | 136, 507, 657, 946 |
| PspPI | GGNCC | 3 cut(s) | 351, 852, 945 |
| PsuI | RGATCY | 2 cut(s) | 73, 144 |
| PvuII | CAGCTG | 1 cut(s) | 223 |
| RsaI | GTAC | 4 cut(s) | 209, 266, 308, 587 |
| RsaNI | GTAC | 4 cut(s) | 208, 265, 307, 586 |
| SacI | GAGCTC | 1 cut(s) | 399 |
| SacII | CCGCGG | 3 cut(s) | 777, 888, 974 |
| SalI | GTCGAC | 1 cut(s) | 158 |
| SaqAI | TTAA | 1 cut(s) | 62 |
| Sau3AI | GATC | 9 cut(s) | 73, 139, 144, 226, 233, 247, 252, 319, 418 |
| Sau96I | GGNCC | 3 cut(s) | 351, 852, 945 |
| ScrFI | CCNGG | 6 cut(s) | 293, 373, 413, 591, 686, 850 |
| SduI | GDGCHC | 1 cut(s) | 399 |
| SfaNI | GCATC | 3 cut(s) | 334, 679, 786 |
| SfcI | CTRYAG | 1 cut(s) | 406 |
| Sfr303I | CCGCGG | 3 cut(s) | 777, 888, 974 |
| SfuI | TTCGAA | 1 cut(s) | 642 |
| SgrAI | CRCCGGYG | 2 cut(s) | 425, 877 |
| SgrBI | CCGCGG | 3 cut(s) | 777, 888, 974 |
| SgrDI | CGTCGACG | 1 cut(s) | 158 |
| SinI | GGWCC | 1 cut(s) | 945 |
| SmlI | CTYRAG | 1 cut(s) | 108 |
| SmoI | CTYRAG | 1 cut(s) | 108 |
| Sse9I | AATT | 5 cut(s) | 126, 604, 661, 910, 931 |
| SseBI | AGGCCT | 1 cut(s) | 782 |
| SstI | GAGCTC | 1 cut(s) | 399 |
| StuI | AGGCCT | 1 cut(s) | 782 |
| StyD4I | CCNGG | 6 cut(s) | 291, 371, 411, 589, 684, 848 |
| StyI | CCWWGG | 1 cut(s) | 720 |
| TaaI | ACNGT | 3 cut(s) | 569, 579, 629 |
| TaiI | ACGT | 1 cut(s) | 165 |
| TaqI | TCGA | 7 cut(s) | 159, 387, 417, 484, 533, 542, 642 |
| TasI | AATT | 5 cut(s) | 126, 604, 661, 910, 931 |
| TfiI | GAWTC | 2 cut(s) | 45, 711 |
| Tru1I | TTAA | 1 cut(s) | 62 |
| Tru9I | TTAA | 1 cut(s) | 62 |
| TseI | GCWGC | 8 cut(s) | 280, 283, 511, 514, 702, 738, 770, 868 |
| VpaK11BI | GGWCC | 1 cut(s) | 945 |
| XapI | RAATTY | 3 cut(s) | 661, 910, 931 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 220 |
| XmiI | GTMKAC | 1 cut(s) | 159 |
| ZraI | GACGTC | 1 cut(s) | 163 |
| Zsp2I | ATGCAT | 1 cut(s) | 349 |