DnaJ domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G01710 AT2G01710 |
| fragaria_vesca | FvH4_5g35420 |
| malus_domestica | MD08G1196700.v1.1 MD15G1301600.v1.1 MD15G1384400.v1.1 |
| prunus_persica | Prupe.1G531000_v2.0.a1 |
| pyrus_communis | pycom08g16900 pycom15g34460 |
| rosa_chinensis | RchiOBHm_Chr7g0236821 |
| rosa_laevigata | RLG00000001059 |
| rosa_multiflora | Rmu_sc0002867.1_g000022 Rmu_sc0008851.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00224800 |
| rosa_rugosa | Rorug07G0299600 |
| rosa_samantha | Rh7AG454800 Rh7BG426000 Rh7CG473400 Rh7DG442700 |
| rosa_wichuraiana | Rw7G037750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 895 |
| AatII | GACGTC | 1 cut(s) | 165 |
| Acc36I | ACCTGC | 1 cut(s) | 895 |
| AccB1I | GGYRCC | 1 cut(s) | 859 |
| AccBSI | CCGCTC | 1 cut(s) | 34 |
| AccI | GTMKAC | 1 cut(s) | 159 |
| AccII | CGCG | 6 cut(s) | 88, 90, 186, 779, 902, 991 |
| AclWI | GGATC | 2 cut(s) | 228, 234 |
| AcoI | YGGCCR | 2 cut(s) | 369, 986 |
| AcsI | RAATTY | 2 cut(s) | 928, 949 |
| AcyI | GRCGYC | 1 cut(s) | 162 |
| AfaI | GTAC | 3 cut(s) | 209, 266, 587 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 274, 292, 348, 904 |
| AgsI | TTSAA | 2 cut(s) | 331, 928 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 558 |
| AjnI | CCWGG | 3 cut(s) | 219, 684, 854 |
| AluBI | AGCT | 7 cut(s) | 58, 84, 334, 397, 460, 546, 741 |
| AluI | AGCT | 7 cut(s) | 58, 84, 334, 397, 460, 546, 741 |
| Alw21I | GWGCWC | 1 cut(s) | 324 |
| Alw26I | GTCTC | 1 cut(s) | 842 |
| AlwI | GGATC | 2 cut(s) | 228, 234 |
| AoxI | GGCC | 7 cut(s) | 351, 369, 400, 645, 682, 783, 986 |
| ApeKI | GCWGC | 9 cut(s) | 81, 434, 437, 440, 511, 514, 702, 738, 770 |
| ApoI | RAATTY | 2 cut(s) | 928, 949 |
| AspA2I | CCTAGG | 1 cut(s) | 590 |
| AspLEI | GCGC | 4 cut(s) | 90, 109, 186, 781 |
| AspS9I | GGNCC | 4 cut(s) | 4, 351, 400, 655 |
| AsuC2I | CCSGG | 2 cut(s) | 293, 368 |
| AsuHPI | GGTGA | 1 cut(s) | 415 |
| AvaII | GGWCC | 2 cut(s) | 4, 655 |
| AvrII | CCTAGG | 1 cut(s) | 590 |
| BaeGI | GKGCMC | 1 cut(s) | 862 |
| BanI | GGYRCC | 1 cut(s) | 859 |
| BbsI | GAAGAC | 1 cut(s) | 376 |
| Bbv12I | GWGCWC | 1 cut(s) | 324 |
| BbvI | GCAGC | 9 cut(s) | 93, 446, 449, 452, 523, 526, 689, 750, 757 |
| BceAI | ACGGC | 8 cut(s) | 137, 148, 287, 338, 511, 570, 632, 1001 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 467, 501 |
| BciT130I | CCWGG | 3 cut(s) | 221, 686, 856 |
| BclI | TGATCA | 1 cut(s) | 252 |
| BcnI | CCSGG | 2 cut(s) | 293, 368 |
| BcoDI | GTCTC | 1 cut(s) | 842 |
| BfaI | CTAG | 2 cut(s) | 170, 591 |
| BfmI | CTRYAG | 2 cut(s) | 62, 406 |
| BfuAI | ACCTGC | 1 cut(s) | 895 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 104 |
| BglII | AGATCT | 2 cut(s) | 73, 144 |
| BlnI | CCTAGG | 1 cut(s) | 590 |
| BlpI | GCTNAGC | 1 cut(s) | 742 |
| Bme1390I | CCNGG | 5 cut(s) | 221, 293, 368, 686, 856 |
| Bme18I | GGWCC | 2 cut(s) | 4, 655 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 558 |
| BmgT120I | GGNCC | 4 cut(s) | 4, 351, 400, 655 |
| BmiI | GGNNCC | 3 cut(s) | 136, 657, 861 |
| BmrFI | CCNGG | 5 cut(s) | 221, 293, 368, 686, 856 |
| BmrI | ACTGGG | 1 cut(s) | 407 |
| BmsI | GCATC | 3 cut(s) | 334, 679, 789 |
| BmuI | ACTGGG | 1 cut(s) | 407 |
| BpiI | GAAGAC | 1 cut(s) | 376 |
| BpmI | CTGGAG | 1 cut(s) | 203 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 742 |
| BpuMI | CCSGG | 2 cut(s) | 293, 368 |
| BsaHI | GRCGYC | 1 cut(s) | 162 |
| BsaJI | CCNNGG | 5 cut(s) | 590, 720, 855, 900, 989 |
| BsaWI | WCCGGW | 1 cut(s) | 463 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 194, 224 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 274, 292, 348, 904 |
| Bse118I | RCCGGY | 2 cut(s) | 379, 781 |
| Bse1I | ACTGG | 2 cut(s) | 209, 413 |
| BseBI | CCWGG | 3 cut(s) | 221, 686, 856 |
| BseDI | CCNNGG | 5 cut(s) | 590, 720, 855, 900, 989 |
| BseGI | GGATG | 2 cut(s) | 694, 804 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 274, 292, 348, 904 |
| BseMII | CTCAG | 3 cut(s) | 68, 756, 837 |
| BseNI | ACTGG | 2 cut(s) | 209, 413 |
| BseRI | GAGGAG | 1 cut(s) | 275 |
| BseSI | GKGCMC | 1 cut(s) | 862 |
| BseX3I | CGGCCG | 1 cut(s) | 986 |
| BseXI | GCAGC | 9 cut(s) | 93, 446, 449, 452, 523, 526, 689, 750, 757 |
| BseYI | CCCAGC | 2 cut(s) | 397, 705 |
| Bsh1236I | CGCG | 6 cut(s) | 88, 90, 186, 779, 902, 991 |
| Bsh1285I | CGRYCG | 1 cut(s) | 989 |
| BshFI | GGCC | 7 cut(s) | 353, 371, 402, 647, 684, 785, 988 |
| BshNI | GGYRCC | 1 cut(s) | 859 |
| BsiEI | CGRYCG | 1 cut(s) | 989 |
| BsiHKAI | GWGCWC | 1 cut(s) | 324 |
| BsiSI | CCGG | 5 cut(s) | 293, 368, 380, 464, 782 |
| BslFI | GGGAC | 5 cut(s) | 641, 881, 970, 976, 996 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 274, 292, 348, 904 |
| BsmAI | GTCTC | 1 cut(s) | 842 |
| BsmFI | GGGAC | 5 cut(s) | 641, 881, 970, 976, 996 |
| BsmI | GAATGC | 1 cut(s) | 487 |
| BsnI | GGCC | 7 cut(s) | 353, 371, 402, 647, 684, 785, 988 |
| Bsp1286I | GDGCHC | 2 cut(s) | 324, 862 |
| Bsp143I | GATC | 9 cut(s) | 73, 139, 144, 226, 233, 247, 252, 260, 418 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 742 |
| Bsp19I | CCATGG | 1 cut(s) | 720 |
| BspANI | GGCC | 7 cut(s) | 353, 371, 402, 647, 684, 785, 988 |
| BspCNI | CTCAG | 3 cut(s) | 69, 755, 838 |
| BspFNI | CGCG | 6 cut(s) | 88, 90, 186, 779, 902, 991 |
| BspLI | GGNNCC | 3 cut(s) | 136, 657, 861 |
| BspMI | ACCTGC | 1 cut(s) | 895 |
| BspPI | GGATC | 2 cut(s) | 228, 234 |
| BspT107I | GGYRCC | 1 cut(s) | 859 |
| BsrBI | CCGCTC | 1 cut(s) | 34 |
| BsrFI | RCCGGY | 2 cut(s) | 379, 781 |
| BsrI | ACTGG | 2 cut(s) | 209, 413 |
| BssAI | RCCGGY | 2 cut(s) | 379, 781 |
| BssECI | CCNNGG | 5 cut(s) | 590, 720, 855, 900, 989 |
| BssMI | GATC | 9 cut(s) | 73, 139, 144, 226, 233, 247, 252, 260, 418 |
| BssNI | GRCGYC | 1 cut(s) | 162 |
| BssT1I | CCWWGG | 2 cut(s) | 590, 720 |
| Bst2UI | CCWGG | 3 cut(s) | 221, 686, 856 |
| Bst4CI | ACNGT | 2 cut(s) | 569, 579 |
| Bst6I | CTCTTC | 1 cut(s) | 971 |
| BstACI | GRCGYC | 1 cut(s) | 162 |
| BstC8I | GCNNGC | 4 cut(s) | 86, 276, 324, 783 |
| BstDEI | CTNAG | 5 cut(s) | 77, 148, 742, 846, 1002 |
| BstDSI | CCRYGG | 3 cut(s) | 720, 900, 989 |
| BstF5I | GGATG | 2 cut(s) | 694, 804 |
| BstFNI | CGCG | 6 cut(s) | 88, 90, 186, 779, 902, 991 |
| BstHHI | GCGC | 4 cut(s) | 90, 109, 186, 781 |
| BstKTI | GATC | 9 cut(s) | 76, 142, 147, 229, 236, 250, 255, 263, 421 |
| BstMAI | GTCTC | 1 cut(s) | 842 |
| BstMBI | GATC | 9 cut(s) | 73, 139, 144, 226, 233, 247, 252, 260, 418 |
| BstMCI | CGRYCG | 1 cut(s) | 989 |
| BstNI | CCWGG | 3 cut(s) | 221, 686, 856 |
| BstSCI | CCNGG | 5 cut(s) | 219, 291, 366, 684, 854 |
| BstSFI | CTRYAG | 2 cut(s) | 62, 406 |
| BstSLI | GKGCMC | 1 cut(s) | 862 |
| BstUI | CGCG | 6 cut(s) | 88, 90, 186, 779, 902, 991 |
| BstV1I | GCAGC | 9 cut(s) | 93, 446, 449, 452, 523, 526, 689, 750, 757 |
| BstV2I | GAAGAC | 1 cut(s) | 376 |
| BstX2I | RGATCY | 2 cut(s) | 73, 144 |
| BstYI | RGATCY | 2 cut(s) | 73, 144 |
| BstZI | CGGCCG | 1 cut(s) | 986 |
| BsuRI | GGCC | 7 cut(s) | 353, 371, 402, 647, 684, 785, 988 |
| BtgI | CCRYGG | 3 cut(s) | 720, 900, 989 |
| BtgZI | GCGATG | 1 cut(s) | 930 |
| BtsCI | GGATG | 2 cut(s) | 694, 804 |
| BveI | ACCTGC | 1 cut(s) | 895 |
| Cac8I | GCNNGC | 4 cut(s) | 86, 276, 324, 783 |
| CfoI | GCGC | 4 cut(s) | 90, 109, 186, 781 |
| Cfr10I | RCCGGY | 2 cut(s) | 379, 781 |
| Cfr13I | GGNCC | 4 cut(s) | 4, 351, 400, 655 |
| Cfr42I | CCGCGG | 2 cut(s) | 903, 992 |
| Csp6I | GTAC | 3 cut(s) | 208, 265, 586 |
| CviAII | CATG | 2 cut(s) | 348, 721 |
| CviQI | GTAC | 3 cut(s) | 208, 265, 586 |
| DdeI | CTNAG | 5 cut(s) | 77, 148, 742, 846, 1002 |
| DpnI | GATC | 9 cut(s) | 75, 141, 146, 228, 235, 249, 254, 262, 420 |
| DpnII | GATC | 9 cut(s) | 73, 139, 144, 226, 233, 247, 252, 260, 418 |
| DriI | GACNNNNNGTC | 1 cut(s) | 558 |
| EaeI | YGGCCR | 2 cut(s) | 369, 986 |
| EagI | CGGCCG | 1 cut(s) | 986 |
| Eam1104I | CTCTTC | 1 cut(s) | 971 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 558 |
| EarI | CTCTTC | 1 cut(s) | 971 |
| EclXI | CGGCCG | 1 cut(s) | 986 |
| Eco130I | CCWWGG | 2 cut(s) | 590, 720 |
| Eco47I | GGWCC | 2 cut(s) | 4, 655 |
| Eco52I | CGGCCG | 1 cut(s) | 986 |
| EcoRI | GAATTC | 1 cut(s) | 949 |
| EcoRII | CCWGG | 3 cut(s) | 219, 684, 854 |
| EcoT14I | CCWWGG | 2 cut(s) | 590, 720 |
| EcoT22I | ATGCAT | 1 cut(s) | 349 |
| ErhI | CCWWGG | 2 cut(s) | 590, 720 |
| FaeI | CATG | 2 cut(s) | 351, 724 |
| FaiI | YATR | 6 cut(s) | 349, 573, 575, 582, 600, 722 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 368, 400, 623, 655 |
| FaqI | GGGAC | 5 cut(s) | 641, 881, 970, 976, 996 |
| FatI | CATG | 2 cut(s) | 347, 720 |
| FauI | CCCGC | 2 cut(s) | 465, 907 |
| FbaI | TGATCA | 1 cut(s) | 252 |
| FblI | GTMKAC | 1 cut(s) | 159 |
| FokI | GGATG | 2 cut(s) | 701, 811 |
| FspBI | CTAG | 2 cut(s) | 170, 591 |
| GlaI | GCGC | 4 cut(s) | 89, 108, 185, 780 |
| GsaI | CCCAGC | 2 cut(s) | 401, 709 |
| GsuI | CTGGAG | 1 cut(s) | 203 |
| HaeIII | GGCC | 7 cut(s) | 353, 371, 402, 647, 684, 785, 988 |
| HapII | CCGG | 5 cut(s) | 293, 368, 380, 464, 782 |
| HhaI | GCGC | 4 cut(s) | 90, 109, 186, 781 |
| Hin1I | GRCGYC | 1 cut(s) | 162 |
| Hin1II | CATG | 2 cut(s) | 351, 724 |
| Hin6I | GCGC | 4 cut(s) | 88, 107, 184, 779 |
| HinP1I | GCGC | 4 cut(s) | 88, 107, 184, 779 |
| HincII | GTYRAC | 2 cut(s) | 160, 999 |
| HindII | GTYRAC | 2 cut(s) | 160, 999 |
| HindIII | AAGCTT | 1 cut(s) | 458 |
| HinfI | GANTC | 1 cut(s) | 45 |
| HpaI | GTTAAC | 1 cut(s) | 999 |
| HpaII | CCGG | 5 cut(s) | 293, 368, 380, 464, 782 |
| HphI | GGTGA | 1 cut(s) | 415 |
| Hpy166II | GTNNAC | 3 cut(s) | 160, 190, 999 |
| Hpy188III | TCNNGA | 3 cut(s) | 256, 534, 550 |
| Hpy8I | GTNNAC | 3 cut(s) | 160, 190, 999 |
| Hpy99I | CGWCG | 5 cut(s) | 164, 242, 273, 341, 497 |
| HpyAV | CCTTC | 3 cut(s) | 322, 337, 796 |
| HpyCH4III | ACNGT | 2 cut(s) | 569, 579 |
| HpyCH4IV | ACGT | 1 cut(s) | 162 |
| HpyCH4V | TGCA | 2 cut(s) | 347, 679 |
| HpyF3I | CTNAG | 5 cut(s) | 77, 148, 742, 846, 1002 |
| HpySE526I | ACGT | 1 cut(s) | 162 |
| Hsp92I | GRCGYC | 1 cut(s) | 162 |
| Hsp92II | CATG | 2 cut(s) | 351, 724 |
| HspAI | GCGC | 4 cut(s) | 88, 107, 184, 779 |
| KroI | GCCGGC | 1 cut(s) | 781 |
| KroNI | GCCGGC | 1 cut(s) | 783 |
| Ksp22I | TGATCA | 1 cut(s) | 252 |
| KspAI | GTTAAC | 1 cut(s) | 999 |
| KspI | CCGCGG | 2 cut(s) | 903, 992 |
| Kzo9I | GATC | 9 cut(s) | 73, 139, 144, 226, 233, 247, 252, 260, 418 |
| LmnI | GCTCC | 3 cut(s) | 63, 140, 288 |
| Lsp1109I | GCAGC | 9 cut(s) | 93, 446, 449, 452, 523, 526, 689, 750, 757 |
| LweI | GCATC | 3 cut(s) | 334, 679, 789 |
| MaeI | CTAG | 2 cut(s) | 170, 591 |
| MaeII | ACGT | 1 cut(s) | 162 |
| MalI | GATC | 9 cut(s) | 75, 141, 146, 228, 235, 249, 254, 262, 420 |
| MbiI | CCGCTC | 1 cut(s) | 34 |
| MboI | GATC | 9 cut(s) | 73, 139, 144, 226, 233, 247, 252, 260, 418 |
| MboII | GAAGA | 3 cut(s) | 376, 706, 988 |
| MflI | RGATCY | 2 cut(s) | 73, 144 |
| MhlI | GDGCHC | 2 cut(s) | 324, 862 |
| MluCI | AATT | 5 cut(s) | 604, 625, 661, 928, 949 |
| MmeI | TCCRAC | 2 cut(s) | 261, 387 |
| Mph1103I | ATGCAT | 1 cut(s) | 349 |
| MroNI | GCCGGC | 1 cut(s) | 781 |
| MseI | TTAA | 1 cut(s) | 998 |
| MspA1I | CMGCKG | 2 cut(s) | 902, 991 |
| MspI | CCGG | 5 cut(s) | 293, 368, 380, 464, 782 |
| MspR9I | CCNGG | 5 cut(s) | 221, 293, 368, 686, 856 |
| Mva1269I | GAATGC | 1 cut(s) | 487 |
| MvaI | CCWGG | 3 cut(s) | 221, 686, 856 |
| MvnI | CGCG | 6 cut(s) | 88, 90, 186, 779, 902, 991 |
| NaeI | GCCGGC | 1 cut(s) | 783 |
| NciI | CCSGG | 2 cut(s) | 293, 368 |
| NcoI | CCATGG | 1 cut(s) | 720 |
| NdeII | GATC | 9 cut(s) | 73, 139, 144, 226, 233, 247, 252, 260, 418 |
| NgoMIV | GCCGGC | 1 cut(s) | 781 |
| NlaIII | CATG | 2 cut(s) | 351, 724 |
| NlaIV | GGNNCC | 3 cut(s) | 136, 657, 861 |
| NmeAIII | GCCGAG | 3 cut(s) | 55, 76, 343 |
| NsiI | ATGCAT | 1 cut(s) | 349 |
| PaqCI | CACCTGC | 1 cut(s) | 895 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 48, 315, 539 |
| PctI | GAATGC | 1 cut(s) | 487 |
| PdiI | GCCGGC | 1 cut(s) | 783 |
| PfeI | GAWTC | 1 cut(s) | 45 |
| Psp6I | CCWGG | 3 cut(s) | 219, 684, 854 |
| PspFI | CCCAGC | 2 cut(s) | 397, 705 |
| PspGI | CCWGG | 3 cut(s) | 219, 684, 854 |
| PspN4I | GGNNCC | 3 cut(s) | 136, 657, 861 |
| PspPI | GGNCC | 4 cut(s) | 4, 351, 400, 655 |
| PsuI | RGATCY | 2 cut(s) | 73, 144 |
| RsaI | GTAC | 3 cut(s) | 209, 266, 587 |
| RsaNI | GTAC | 3 cut(s) | 208, 265, 586 |
| SacII | CCGCGG | 2 cut(s) | 903, 992 |
| SalI | GTCGAC | 1 cut(s) | 158 |
| SaqAI | TTAA | 1 cut(s) | 998 |
| Sau3AI | GATC | 9 cut(s) | 73, 139, 144, 226, 233, 247, 252, 260, 418 |
| Sau96I | GGNCC | 4 cut(s) | 4, 351, 400, 655 |
| ScrFI | CCNGG | 5 cut(s) | 221, 293, 368, 686, 856 |
| SduI | GDGCHC | 2 cut(s) | 324, 862 |
| SfaNI | GCATC | 3 cut(s) | 334, 679, 789 |
| SfcI | CTRYAG | 2 cut(s) | 62, 406 |
| Sfr303I | CCGCGG | 2 cut(s) | 903, 992 |
| SgrBI | CCGCGG | 2 cut(s) | 903, 992 |
| SinI | GGWCC | 2 cut(s) | 4, 655 |
| Sse9I | AATT | 5 cut(s) | 604, 625, 661, 928, 949 |
| SspMI | CTAG | 2 cut(s) | 170, 591 |
| StyD4I | CCNGG | 5 cut(s) | 219, 291, 366, 684, 854 |
| StyI | CCWWGG | 2 cut(s) | 590, 720 |
| TaaI | ACNGT | 2 cut(s) | 569, 579 |
| TaiI | ACGT | 1 cut(s) | 165 |
| TaqI | TCGA | 7 cut(s) | 159, 387, 417, 487, 533, 542, 947 |
| TasI | AATT | 5 cut(s) | 604, 625, 661, 928, 949 |
| TfiI | GAWTC | 1 cut(s) | 45 |
| Tru1I | TTAA | 1 cut(s) | 998 |
| Tru9I | TTAA | 1 cut(s) | 998 |
| TseI | GCWGC | 9 cut(s) | 81, 434, 437, 440, 511, 514, 702, 738, 770 |
| VpaK11BI | GGWCC | 2 cut(s) | 4, 655 |
| XapI | RAATTY | 2 cut(s) | 928, 949 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 220 |
| XmaJI | CCTAGG | 1 cut(s) | 590 |
| XmiI | GTMKAC | 1 cut(s) | 159 |
| XspI | CTAG | 2 cut(s) | 170, 591 |
| ZraI | GACGTC | 1 cut(s) | 163 |
| Zsp2I | ATGCAT | 1 cut(s) | 349 |