DnaJ domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G01710 AT2G01710 |
| fragaria_vesca | FvH4_5g35420 |
| malus_domestica | MD08G1196700.v1.1 MD15G1301600.v1.1 MD15G1384400.v1.1 |
| prunus_persica | Prupe.1G531000_v2.0.a1 |
| pyrus_communis | pycom08g16900 pycom15g34460 |
| rosa_chinensis | RchiOBHm_Chr7g0236821 |
| rosa_laevigata | RLG00000001059 |
| rosa_multiflora | Rmu_sc0002867.1_g000022 Rmu_sc0008851.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00224800 |
| rosa_rugosa | Rorug07G0299600 |
| rosa_samantha | Rh7AG454800 Rh7BG426000 Rh7CG473400 Rh7DG442700 |
| rosa_wichuraiana | Rw7G037750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 179 |
| AccB1I | GGYRCC | 2 cut(s) | 838, 847 |
| AccI | GTMKAC | 1 cut(s) | 521 |
| AccII | CGCG | 4 cut(s) | 84, 180, 320, 725 |
| AclWI | GGATC | 5 cut(s) | 12, 75, 222, 353, 416 |
| AcoI | YGGCCR | 2 cut(s) | 363, 493 |
| AcsI | RAATTY | 4 cut(s) | 375, 427, 640, 853 |
| AcyI | GRCGYC | 1 cut(s) | 474 |
| AfaI | GTAC | 6 cut(s) | 203, 302, 545, 560, 566, 941 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 268, 286, 342, 857 |
| AflIII | ACRYGT | 2 cut(s) | 178, 318 |
| AgsI | TTSAA | 1 cut(s) | 325 |
| AjiI | CACGTC | 1 cut(s) | 537 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 305, 337 |
| AluBI | AGCT | 6 cut(s) | 52, 78, 101, 328, 391, 585 |
| AluI | AGCT | 6 cut(s) | 52, 78, 101, 328, 391, 585 |
| Alw21I | GWGCWC | 2 cut(s) | 162, 318 |
| Alw26I | GTCTC | 1 cut(s) | 101 |
| AlwI | GGATC | 5 cut(s) | 12, 75, 222, 353, 416 |
| AoxI | GGCC | 6 cut(s) | 345, 363, 395, 463, 493, 899 |
| ApeKI | GCWGC | 8 cut(s) | 75, 78, 118, 499, 502, 585, 717, 746 |
| ApoI | RAATTY | 4 cut(s) | 375, 427, 640, 853 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 719, 751 |
| AspA2I | CCTAGG | 1 cut(s) | 569 |
| AspLEI | GCGC | 1 cut(s) | 725 |
| AspS9I | GGNCC | 4 cut(s) | 345, 395, 463, 885 |
| AsuC2I | CCSGG | 4 cut(s) | 65, 287, 461, 890 |
| AsuHPI | GGTGA | 1 cut(s) | 823 |
| AsuII | TTCGAA | 2 cut(s) | 240, 431 |
| AvaII | GGWCC | 1 cut(s) | 885 |
| AvrII | CCTAGG | 1 cut(s) | 569 |
| BaeGI | GKGCMC | 2 cut(s) | 542, 843 |
| BamHI | GGATCC | 1 cut(s) | 4 |
| BanI | GGYRCC | 2 cut(s) | 838, 847 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 362, 394 |
| Bbv12I | GWGCWC | 2 cut(s) | 162, 318 |
| BbvI | GCAGC | 8 cut(s) | 65, 87, 105, 511, 514, 572, 729, 758 |
| BccI | CCATC | 1 cut(s) | 875 |
| BceAI | ACGGC | 5 cut(s) | 142, 281, 332, 382, 508 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 421, 455 |
| BcnI | CCSGG | 4 cut(s) | 65, 287, 461, 890 |
| BcoDI | GTCTC | 1 cut(s) | 101 |
| BfaI | CTAG | 2 cut(s) | 98, 570 |
| BfmI | CTRYAG | 1 cut(s) | 56 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 448 |
| BglII | AGATCT | 1 cut(s) | 138 |
| BlnI | CCTAGG | 1 cut(s) | 569 |
| BmcAI | AGTACT | 1 cut(s) | 941 |
| Bme1390I | CCNGG | 4 cut(s) | 65, 287, 461, 890 |
| Bme18I | GGWCC | 1 cut(s) | 885 |
| BmgBI | CACGTC | 1 cut(s) | 537 |
| BmgT120I | GGNCC | 4 cut(s) | 345, 395, 463, 885 |
| BmiI | GGNNCC | 7 cut(s) | 6, 396, 464, 840, 849, 886, 887 |
| BmrFI | CCNGG | 4 cut(s) | 65, 287, 461, 890 |
| BmsI | GCATC | 2 cut(s) | 328, 762 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 790, 822 |
| BpmI | CTGGAG | 1 cut(s) | 197 |
| Bpu10I | CCTNAGC | 1 cut(s) | 102 |
| Bpu14I | TTCGAA | 2 cut(s) | 240, 431 |
| BpuMI | CCSGG | 4 cut(s) | 65, 287, 461, 890 |
| Bsa29I | ATCGAT | 1 cut(s) | 411 |
| BsaAI | YACGTR | 1 cut(s) | 553 |
| BsaHI | GRCGYC | 1 cut(s) | 474 |
| BsaI | GGTCTC | 1 cut(s) | 101 |
| BsaJI | CCNNGG | 6 cut(s) | 460, 506, 569, 834, 843, 888 |
| BsaWI | WCCGGW | 1 cut(s) | 808 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 305, 335 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 268, 286, 342, 857 |
| Bse118I | RCCGGY | 2 cut(s) | 442, 476 |
| Bse1I | ACTGG | 3 cut(s) | 203, 214, 773 |
| BseCI | ATCGAT | 1 cut(s) | 411 |
| BseDI | CCNNGG | 6 cut(s) | 460, 506, 569, 834, 843, 888 |
| BseGI | GGATG | 2 cut(s) | 777, 886 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 268, 286, 342, 857 |
| BseMII | CTCAG | 4 cut(s) | 62, 116, 144, 926 |
| BseNI | ACTGG | 3 cut(s) | 203, 214, 773 |
| BseRI | GAGGAG | 1 cut(s) | 269 |
| BseSI | GKGCMC | 2 cut(s) | 542, 843 |
| BseXI | GCAGC | 8 cut(s) | 65, 87, 105, 511, 514, 572, 729, 758 |
| BseYI | CCCAGC | 1 cut(s) | 391 |
| BsgI | GTGCAG | 1 cut(s) | 677 |
| Bsh1236I | CGCG | 4 cut(s) | 84, 180, 320, 725 |
| Bsh1285I | CGRYCG | 2 cut(s) | 150, 223 |
| BshFI | GGCC | 6 cut(s) | 347, 365, 397, 465, 495, 901 |
| BshNI | GGYRCC | 2 cut(s) | 838, 847 |
| BshVI | ATCGAT | 1 cut(s) | 411 |
| BsiEI | CGRYCG | 2 cut(s) | 150, 223 |
| BsiHKAI | GWGCWC | 2 cut(s) | 162, 318 |
| BsiSI | CCGG | 9 cut(s) | 64, 287, 362, 406, 443, 460, 477, 809, 890 |
| BslFI | GGGAC | 3 cut(s) | 467, 675, 898 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 268, 286, 342, 857 |
| BsmAI | GTCTC | 1 cut(s) | 101 |
| BsmFI | GGGAC | 3 cut(s) | 467, 675, 898 |
| BsnI | GGCC | 6 cut(s) | 347, 365, 397, 465, 495, 901 |
| Bso31I | GGTCTC | 1 cut(s) | 101 |
| Bsp119I | TTCGAA | 2 cut(s) | 240, 431 |
| Bsp1286I | GDGCHC | 4 cut(s) | 162, 318, 542, 843 |
| Bsp143I | GATC | 9 cut(s) | 4, 67, 133, 138, 220, 227, 358, 408, 412 |
| BspANI | GGCC | 6 cut(s) | 347, 365, 397, 465, 495, 901 |
| BspCNI | CTCAG | 4 cut(s) | 63, 115, 143, 925 |
| BspDI | ATCGAT | 1 cut(s) | 411 |
| BspFNI | CGCG | 4 cut(s) | 84, 180, 320, 725 |
| BspLI | GGNNCC | 7 cut(s) | 6, 396, 464, 840, 849, 886, 887 |
| BspPI | GGATC | 5 cut(s) | 12, 75, 222, 353, 416 |
| BspT104I | TTCGAA | 2 cut(s) | 240, 431 |
| BspT107I | GGYRCC | 2 cut(s) | 838, 847 |
| BspTNI | GGTCTC | 1 cut(s) | 101 |
| BsrFI | RCCGGY | 2 cut(s) | 442, 476 |
| BsrI | ACTGG | 3 cut(s) | 203, 214, 773 |
| BssAI | RCCGGY | 2 cut(s) | 442, 476 |
| BssECI | CCNNGG | 6 cut(s) | 460, 506, 569, 834, 843, 888 |
| BssMI | GATC | 9 cut(s) | 4, 67, 133, 138, 220, 227, 358, 408, 412 |
| BssNI | GRCGYC | 1 cut(s) | 474 |
| BssT1I | CCWWGG | 1 cut(s) | 569 |
| Bst4CI | ACNGT | 2 cut(s) | 548, 826 |
| Bst6I | CTCTTC | 1 cut(s) | 914 |
| BstACI | GRCGYC | 1 cut(s) | 474 |
| BstBAI | YACGTR | 1 cut(s) | 553 |
| BstBI | TTCGAA | 2 cut(s) | 240, 431 |
| BstC8I | GCNNGC | 3 cut(s) | 270, 318, 497 |
| BstDEI | CTNAG | 5 cut(s) | 71, 102, 130, 163, 912 |
| BstDSI | CCRYGG | 1 cut(s) | 843 |
| BstF5I | GGATG | 2 cut(s) | 777, 886 |
| BstFNI | CGCG | 4 cut(s) | 84, 180, 320, 725 |
| BstHHI | GCGC | 1 cut(s) | 725 |
| BstKTI | GATC | 9 cut(s) | 7, 70, 136, 141, 223, 230, 361, 411, 415 |
| BstMAI | GTCTC | 1 cut(s) | 101 |
| BstMBI | GATC | 9 cut(s) | 4, 67, 133, 138, 220, 227, 358, 408, 412 |
| BstMCI | CGRYCG | 2 cut(s) | 150, 223 |
| BstSCI | CCNGG | 4 cut(s) | 63, 285, 459, 888 |
| BstSFI | CTRYAG | 1 cut(s) | 56 |
| BstSLI | GKGCMC | 2 cut(s) | 542, 843 |
| BstUI | CGCG | 4 cut(s) | 84, 180, 320, 725 |
| BstV1I | GCAGC | 8 cut(s) | 65, 87, 105, 511, 514, 572, 729, 758 |
| BstX2I | RGATCY | 3 cut(s) | 4, 67, 138 |
| BstYI | RGATCY | 3 cut(s) | 4, 67, 138 |
| Bsu15I | ATCGAT | 1 cut(s) | 411 |
| BsuRI | GGCC | 6 cut(s) | 347, 365, 397, 465, 495, 901 |
| BsuTUI | ATCGAT | 1 cut(s) | 411 |
| BtgI | CCRYGG | 1 cut(s) | 843 |
| BtrI | CACGTC | 1 cut(s) | 537 |
| BtsCI | GGATG | 2 cut(s) | 777, 886 |
| BtsIMutI | CAGTG | 1 cut(s) | 831 |
| Cac8I | GCNNGC | 3 cut(s) | 270, 318, 497 |
| CfoI | GCGC | 1 cut(s) | 725 |
| Cfr10I | RCCGGY | 2 cut(s) | 442, 476 |
| Cfr13I | GGNCC | 4 cut(s) | 345, 395, 463, 885 |
| ClaI | ATCGAT | 1 cut(s) | 411 |
| CseI | GACGC | 3 cut(s) | 169, 482, 677 |
| Csp6I | GTAC | 6 cut(s) | 202, 301, 544, 559, 565, 940 |
| CspCI | CAANNNNNGTGG | 1 cut(s) | 32 |
| CviAII | CATG | 1 cut(s) | 342 |
| CviQI | GTAC | 6 cut(s) | 202, 301, 544, 559, 565, 940 |
| DdeI | CTNAG | 5 cut(s) | 71, 102, 130, 163, 912 |
| DpnI | GATC | 9 cut(s) | 6, 69, 135, 140, 222, 229, 360, 410, 414 |
| DpnII | GATC | 9 cut(s) | 4, 67, 133, 138, 220, 227, 358, 408, 412 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 179 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 179 |
| EaeI | YGGCCR | 2 cut(s) | 363, 493 |
| Eam1104I | CTCTTC | 1 cut(s) | 914 |
| EarI | CTCTTC | 1 cut(s) | 914 |
| Eco130I | CCWWGG | 1 cut(s) | 569 |
| Eco147I | AGGCCT | 1 cut(s) | 901 |
| Eco31I | GGTCTC | 1 cut(s) | 101 |
| Eco47I | GGWCC | 1 cut(s) | 885 |
| EcoO109I | RGGNCCY | 1 cut(s) | 885 |
| EcoRI | GAATTC | 2 cut(s) | 427, 853 |
| EcoT14I | CCWWGG | 1 cut(s) | 569 |
| EcoT22I | ATGCAT | 1 cut(s) | 343 |
| ErhI | CCWWGG | 1 cut(s) | 569 |
| FaeI | CATG | 1 cut(s) | 345 |
| FaiI | YATR | 2 cut(s) | 309, 343 |
| FaqI | GGGAC | 3 cut(s) | 467, 675, 898 |
| FatI | CATG | 1 cut(s) | 341 |
| FauI | CCCGC | 3 cut(s) | 413, 444, 801 |
| FblI | GTMKAC | 1 cut(s) | 521 |
| FokI | GGATG | 2 cut(s) | 784, 893 |
| FspBI | CTAG | 2 cut(s) | 98, 570 |
| GlaI | GCGC | 1 cut(s) | 724 |
| GsaI | CCCAGC | 1 cut(s) | 395 |
| GsuI | CTGGAG | 1 cut(s) | 197 |
| HaeIII | GGCC | 6 cut(s) | 347, 365, 397, 465, 495, 901 |
| HapII | CCGG | 9 cut(s) | 64, 287, 362, 406, 443, 460, 477, 809, 890 |
| HgaI | GACGC | 3 cut(s) | 169, 482, 677 |
| HhaI | GCGC | 1 cut(s) | 725 |
| Hin1I | GRCGYC | 1 cut(s) | 474 |
| Hin1II | CATG | 1 cut(s) | 345 |
| Hin6I | GCGC | 1 cut(s) | 723 |
| HinP1I | GCGC | 1 cut(s) | 723 |
| HincII | GTYRAC | 2 cut(s) | 184, 522 |
| HindII | GTYRAC | 2 cut(s) | 184, 522 |
| HindIII | AAGCTT | 1 cut(s) | 50 |
| HinfI | GANTC | 2 cut(s) | 39, 910 |
| HpaII | CCGG | 9 cut(s) | 64, 287, 362, 406, 443, 460, 477, 809, 890 |
| HphI | GGTGA | 1 cut(s) | 823 |
| Hpy166II | GTNNAC | 4 cut(s) | 184, 522, 577, 738 |
| Hpy188III | TCNNGA | 4 cut(s) | 104, 250, 513, 529 |
| Hpy8I | GTNNAC | 4 cut(s) | 184, 522, 577, 738 |
| Hpy99I | CGWCG | 5 cut(s) | 267, 335, 476, 494, 538 |
| HpyAV | CCTTC | 1 cut(s) | 721 |
| HpyCH4III | ACNGT | 2 cut(s) | 548, 826 |
| HpyCH4IV | ACGT | 2 cut(s) | 536, 552 |
| HpyCH4V | TGCA | 3 cut(s) | 341, 658, 818 |
| HpyF3I | CTNAG | 5 cut(s) | 71, 102, 130, 163, 912 |
| HpySE526I | ACGT | 2 cut(s) | 536, 552 |
| Hsp92I | GRCGYC | 1 cut(s) | 474 |
| Hsp92II | CATG | 1 cut(s) | 345 |
| HspAI | GCGC | 1 cut(s) | 723 |
| KflI | GGGWCCC | 1 cut(s) | 885 |
| Kzo9I | GATC | 9 cut(s) | 4, 67, 133, 138, 220, 227, 358, 408, 412 |
| LmnI | GCTCC | 2 cut(s) | 282, 313 |
| Lsp1109I | GCAGC | 8 cut(s) | 65, 87, 105, 511, 514, 572, 729, 758 |
| LweI | GCATC | 2 cut(s) | 328, 762 |
| MaeI | CTAG | 2 cut(s) | 98, 570 |
| MaeII | ACGT | 2 cut(s) | 536, 552 |
| MaeIII | GTNAC | 1 cut(s) | 548 |
| MalI | GATC | 9 cut(s) | 6, 69, 135, 140, 222, 229, 360, 410, 414 |
| MboI | GATC | 9 cut(s) | 4, 67, 133, 138, 220, 227, 358, 408, 412 |
| MboII | GAAGA | 2 cut(s) | 928, 931 |
| MflI | RGATCY | 3 cut(s) | 4, 67, 138 |
| MhlI | GDGCHC | 4 cut(s) | 162, 318, 542, 843 |
| MluCI | AATT | 8 cut(s) | 93, 375, 427, 437, 604, 640, 853, 893 |
| MluI | ACGCGT | 2 cut(s) | 178, 318 |
| MlyI | GAGTC | 1 cut(s) | 904 |
| MmeI | TCCRAC | 1 cut(s) | 932 |
| MnlI | CCTC | 7 cut(s) | 290, 501, 608, 616, 844, 891, 917 |
| Mph1103I | ATGCAT | 1 cut(s) | 343 |
| MseI | TTAA | 1 cut(s) | 593 |
| MspA1I | CMGCKG | 3 cut(s) | 78, 118, 720 |
| MspI | CCGG | 9 cut(s) | 64, 287, 362, 406, 443, 460, 477, 809, 890 |
| MspR9I | CCNGG | 4 cut(s) | 65, 287, 461, 890 |
| MvnI | CGCG | 4 cut(s) | 84, 180, 320, 725 |
| NciI | CCSGG | 4 cut(s) | 65, 287, 461, 890 |
| NdeII | GATC | 9 cut(s) | 4, 67, 133, 138, 220, 227, 358, 408, 412 |
| NlaIII | CATG | 1 cut(s) | 345 |
| NlaIV | GGNNCC | 7 cut(s) | 6, 396, 464, 840, 849, 886, 887 |
| NmeAIII | GCCGAG | 4 cut(s) | 49, 70, 396, 531 |
| NsiI | ATGCAT | 1 cut(s) | 343 |
| NspV | TTCGAA | 2 cut(s) | 240, 431 |
| PceI | AGGCCT | 1 cut(s) | 901 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 42, 518, 539, 558 |
| PfeI | GAWTC | 1 cut(s) | 39 |
| Ple19I | CGATCG | 1 cut(s) | 223 |
| PleI | GAGTC | 1 cut(s) | 904 |
| PpsI | GAGTC | 1 cut(s) | 904 |
| Ppu21I | YACGTR | 1 cut(s) | 553 |
| PpuMI | RGGWCCY | 1 cut(s) | 885 |
| Psp5II | RGGWCCY | 1 cut(s) | 885 |
| PspFI | CCCAGC | 1 cut(s) | 391 |
| PspN4I | GGNNCC | 7 cut(s) | 6, 396, 464, 840, 849, 886, 887 |
| PspPI | GGNCC | 4 cut(s) | 345, 395, 463, 885 |
| PspPPI | RGGWCCY | 1 cut(s) | 885 |
| PsuI | RGATCY | 3 cut(s) | 4, 67, 138 |
| PvuI | CGATCG | 1 cut(s) | 223 |
| PvuII | CAGCTG | 1 cut(s) | 78 |
| RsaI | GTAC | 6 cut(s) | 203, 302, 545, 560, 566, 941 |
| RsaNI | GTAC | 6 cut(s) | 202, 301, 544, 559, 565, 940 |
| SalI | GTCGAC | 1 cut(s) | 520 |
| SaqAI | TTAA | 1 cut(s) | 593 |
| Sau3AI | GATC | 9 cut(s) | 4, 67, 133, 138, 220, 227, 358, 408, 412 |
| Sau96I | GGNCC | 4 cut(s) | 345, 395, 463, 885 |
| ScaI | AGTACT | 1 cut(s) | 941 |
| SchI | GAGTC | 1 cut(s) | 904 |
| ScrFI | CCNGG | 4 cut(s) | 65, 287, 461, 890 |
| SduI | GDGCHC | 4 cut(s) | 162, 318, 542, 843 |
| SfaNI | GCATC | 2 cut(s) | 328, 762 |
| SfcI | CTRYAG | 1 cut(s) | 56 |
| SfuI | TTCGAA | 2 cut(s) | 240, 431 |
| SgrAI | CRCCGGYG | 1 cut(s) | 476 |
| SinI | GGWCC | 1 cut(s) | 885 |
| Sse9I | AATT | 8 cut(s) | 93, 375, 427, 437, 604, 640, 853, 893 |
| SseBI | AGGCCT | 1 cut(s) | 901 |
| SspMI | CTAG | 2 cut(s) | 98, 570 |
| StuI | AGGCCT | 1 cut(s) | 901 |
| StyD4I | CCNGG | 4 cut(s) | 63, 285, 459, 888 |
| StyI | CCWWGG | 1 cut(s) | 569 |
| TaaI | ACNGT | 2 cut(s) | 548, 826 |
| TaiI | ACGT | 2 cut(s) | 539, 555 |
| TaqI | TCGA | 7 cut(s) | 240, 411, 425, 431, 512, 521, 621 |
| TaqII | GACCGA | 1 cut(s) | 125 |
| TasI | AATT | 8 cut(s) | 93, 375, 427, 437, 604, 640, 853, 893 |
| TatI | WGTACW | 1 cut(s) | 939 |
| TauI | GCSGC | 9 cut(s) | 84, 118, 170, 451, 649, 717, 723, 746, 758 |
| TfiI | GAWTC | 1 cut(s) | 39 |
| Tru1I | TTAA | 1 cut(s) | 593 |
| Tru9I | TTAA | 1 cut(s) | 593 |
| TscAI | CASTG | 1 cut(s) | 831 |
| TseI | GCWGC | 8 cut(s) | 75, 78, 118, 499, 502, 585, 717, 746 |
| TspRI | CASTG | 1 cut(s) | 831 |
| VpaK11BI | GGWCC | 1 cut(s) | 885 |
| XapI | RAATTY | 4 cut(s) | 375, 427, 640, 853 |
| XmaJI | CCTAGG | 1 cut(s) | 569 |
| XmiI | GTMKAC | 1 cut(s) | 521 |
| XspI | CTAG | 2 cut(s) | 98, 570 |
| ZrmI | AGTACT | 1 cut(s) | 941 |
| Zsp2I | ATGCAT | 1 cut(s) | 343 |