Prupe.1G531000_v2.0.a1

DnaJ domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
43410880 .. 43413132
2253 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G531000.1

Sequence Viewer

Length: 954 bp
ATGGATCCAAACAGAGTGGAAGCCGAGCGCTTGCTCGGAATCGCCGAGAAGCTTCTACACAGCCGAGATCTGAGCAGCTGCCGTGACTTCGCAATTCTGGCGCAAGAGACCGAGCCGCTATTGGAAGGCTCAGATCAGATCTTGGCCGTCGCCGACGTGCTCTTGGCCGCCGACAAGCGCGTAAACAACCACCACGACTGGTACGCCGTTCTCCAGGTCGATCGCCGATCCGAAGATCAGGATCTCATCAAGAGGTCATATCGACGGCTGGCGTTGCTCCTCCACCCGGACAAGAACAAGTACGCTTATGCCGAGCACGCGTTCAAGCTTGTCGCCGATGCATGGGCCGTTTTGTCCGACCCGACTCGGAAGCCGATTTACGACAACGAGTTGGGCCCGTTCAGCCGAGTCGATCTCAGCGCACCGAATTCGAACAAATTGCCTGTACGGCGAGTCAATCGGAGCCGAAACGACGCCGATTTGACAAACGACGGTGAGCATCATCAGCAGCAGAGGTCGAGATTGTCGACTTTCTGGACGACGTGCCCGTACTGCTATGTGCTGTACGAGTACCCTAGGGTTTACGAGAATTGCTGTTTGAGGTGCCAGAATTGTAAGCGCGGGTTTGAGGCGGTGGTTGTGCCGAATTTGCCGCCATTGGTGCAAGGCCAGGAGGCCTACTACTGCTGTTGGGCGTTTTTTCCGATGGGATTTGTGGGCGGGACCCACTCCAATGGCGGGAAGGGTAAGGCGGCCCCGGCAGCGGCCGCAGCCGCCTTTCCCAATTGGATGCCACCTGTCTTTTCGACGACGCCGCCGCAGAGTAAAACTCCGGTGGCTGCCACGGCGGTCCCCGTGGTGGCCAATTCGGGTGGAGTGATGGATGTTTCGGATGGGAACCCGGATTTGGGGACTAATCAGAAGAAGAGGGGACGGCCCAGGAAGGTTATTTGA

Protein Analysis

318

Amino Acids

35.38

Weight (kDa)

8.51

Isoelectric Point (pI)

46.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0011428)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 603
AccI GTMKAC 1 cut(s) 527
AccII CGCG 3 cut(s) 180, 320, 621
AclWI GGATC 3 cut(s) 12, 222, 249
AcoI YGGCCR 4 cut(s) 144, 165, 765, 861
AcsI RAATTY 2 cut(s) 427, 646
AcyI GRCGYC 2 cut(s) 474, 812
AfaI GTAC 6 cut(s) 203, 302, 447, 551, 566, 572
AfeI AGCGCT 1 cut(s) 29
AfiI CCNNNNNNNGG 7 cut(s) 286, 342, 738, 763, 859, 907, 908
AflIII ACRYGT 1 cut(s) 318
AgsI TTSAA 1 cut(s) 325
AjiI CACGTC 2 cut(s) 157, 543
AjnI CCWGG 3 cut(s) 213, 669, 938
AjuI GAANNNNNNNTTGG 2 cut(s) 890, 922
AluBI AGCT 3 cut(s) 52, 78, 328
AluI AGCT 3 cut(s) 52, 78, 328
Alw21I GWGCWC 2 cut(s) 162, 318
Alw26I GTCTC 1 cut(s) 101
AlwI GGATC 3 cut(s) 12, 222, 249
Aor51HI AGCGCT 1 cut(s) 29
ApaI GGGCCC 1 cut(s) 398
ApeKI GCWGC 6 cut(s) 75, 78, 508, 761, 770, 839
ApoI RAATTY 2 cut(s) 427, 646
AspA2I CCTAGG 1 cut(s) 575
AspLEI GCGC 5 cut(s) 30, 103, 180, 422, 621
AspS9I GGNCC 7 cut(s) 345, 394, 395, 723, 754, 850, 936
AsuC2I CCSGG 3 cut(s) 287, 758, 902
AsuHPI GGTGA 1 cut(s) 506
AsuII TTCGAA 1 cut(s) 431
AvaII GGWCC 2 cut(s) 723, 850
AvrII CCTAGG 1 cut(s) 575
BaeGI GKGCMC 2 cut(s) 398, 548
BalI TGGCCA 1 cut(s) 863
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 1 cut(s) 603
BanII GRGCYC 1 cut(s) 398
BarI GAAGNNNNNNTAC 2 cut(s) 362, 394
Bbv12I GWGCWC 2 cut(s) 162, 318
BbvI GCAGC 6 cut(s) 65, 87, 520, 773, 782, 826
BccI CCATC 3 cut(s) 700, 874, 887
BceAI ACGGC 8 cut(s) 66, 131, 191, 281, 332, 464, 861, 950
BcgI CGANNNNNNTGC 4 cut(s) 411, 421, 445, 455
BciT130I CCWGG 3 cut(s) 215, 671, 940
BcnI CCSGG 3 cut(s) 287, 758, 902
BcoDI GTCTC 1 cut(s) 101
BfaI CTAG 1 cut(s) 576
BfoI RGCGCY 1 cut(s) 31
BglI GCCNNNNNGGC 1 cut(s) 448
BglII AGATCT 2 cut(s) 67, 138
BlnI CCTAGG 1 cut(s) 575
Bme1390I CCNGG 6 cut(s) 215, 287, 671, 758, 902, 940
Bme18I GGWCC 2 cut(s) 723, 850
BmgBI CACGTC 2 cut(s) 157, 543
BmgT120I GGNCC 7 cut(s) 345, 394, 395, 723, 754, 850, 936
BmiI GGNNCC 9 cut(s) 6, 396, 464, 605, 724, 725, 756, 852, 899
BmrFI CCNGG 6 cut(s) 215, 287, 671, 758, 902, 940
BmsI GCATC 3 cut(s) 328, 508, 780
BplI GAGNNNNNCTC 4 cut(s) 399, 431, 814, 846
BpmI CTGGAG 1 cut(s) 197
Bpu14I TTCGAA 1 cut(s) 431
BpuMI CCSGG 3 cut(s) 287, 758, 902
BsaBI GATNNNNATC 1 cut(s) 240
BsaHI GRCGYC 2 cut(s) 474, 812
BsaI GGTCTC 1 cut(s) 101
BsaJI CCNNGG 5 cut(s) 575, 756, 843, 855, 938
BsaWI WCCGGW 1 cut(s) 832
Bsc4I CCNNNNNNNGG 7 cut(s) 286, 342, 738, 763, 859, 907, 908
Bse1I ACTGG 1 cut(s) 203
Bse8I GATNNNNATC 1 cut(s) 240
BseBI CCWGG 3 cut(s) 215, 671, 940
BseDI CCNNGG 5 cut(s) 575, 756, 843, 855, 938
BseGI GGATG 3 cut(s) 795, 889, 898
BseJI GATNNNNATC 1 cut(s) 240
BseLI CCNNNNNNNGG 7 cut(s) 286, 342, 738, 763, 859, 907, 908
BseMII CTCAG 3 cut(s) 62, 144, 430
BseNI ACTGG 1 cut(s) 203
BseRI GAGGAG 1 cut(s) 269
BseSI GKGCMC 2 cut(s) 398, 548
BseX3I CGGCCG 1 cut(s) 765
BseXI GCAGC 6 cut(s) 65, 87, 520, 773, 782, 826
Bsh1236I CGCG 3 cut(s) 180, 320, 621
Bsh1285I CGRYCG 2 cut(s) 223, 768
BshNI GGYRCC 1 cut(s) 603
BsiEI CGRYCG 2 cut(s) 223, 768
BsiHKAI GWGCWC 2 cut(s) 162, 318
BsiSI CCGG 4 cut(s) 287, 758, 833, 902
BslFI GGGAC 4 cut(s) 736, 836, 925, 945
BslI CCNNNNNNNGG 7 cut(s) 286, 342, 738, 763, 859, 907, 908
BsmAI GTCTC 1 cut(s) 101
BsmFI GGGAC 4 cut(s) 736, 836, 925, 945
Bso31I GGTCTC 1 cut(s) 101
Bsp119I TTCGAA 1 cut(s) 431
Bsp120I GGGCCC 1 cut(s) 394
Bsp1286I GDGCHC 4 cut(s) 162, 318, 398, 548
Bsp143I GATC 9 cut(s) 4, 67, 133, 138, 220, 227, 235, 241, 412
BspCNI CTCAG 3 cut(s) 63, 143, 429
BspFNI CGCG 3 cut(s) 180, 320, 621
BspLI GGNNCC 9 cut(s) 6, 396, 464, 605, 724, 725, 756, 852, 899
BspPI GGATC 3 cut(s) 12, 222, 249
BspT104I TTCGAA 1 cut(s) 431
BspT107I GGYRCC 1 cut(s) 603
BspTNI GGTCTC 1 cut(s) 101
BsrI ACTGG 1 cut(s) 203
BssECI CCNNGG 5 cut(s) 575, 756, 843, 855, 938
BssMI GATC 9 cut(s) 4, 67, 133, 138, 220, 227, 235, 241, 412
BssNI GRCGYC 2 cut(s) 474, 812
BssT1I CCWWGG 1 cut(s) 575
Bst2UI CCWGG 3 cut(s) 215, 671, 940
Bst4CI ACNGT 1 cut(s) 494
Bst6I CTCTTC 1 cut(s) 920
BstACI GRCGYC 2 cut(s) 474, 812
BstBI TTCGAA 1 cut(s) 431
BstC8I GCNNGC 3 cut(s) 32, 270, 318
BstDEI CTNAG 3 cut(s) 71, 130, 416
BstDSI CCRYGG 2 cut(s) 843, 855
BstF5I GGATG 3 cut(s) 795, 889, 898
BstFNI CGCG 3 cut(s) 180, 320, 621
BstH2I RGCGCY 1 cut(s) 31
BstHHI GCGC 5 cut(s) 30, 103, 180, 422, 621
BstKTI GATC 9 cut(s) 7, 70, 136, 141, 223, 230, 238, 244, 415
BstMAI GTCTC 1 cut(s) 101
BstMBI GATC 9 cut(s) 4, 67, 133, 138, 220, 227, 235, 241, 412
BstMCI CGRYCG 2 cut(s) 223, 768
BstNI CCWGG 3 cut(s) 215, 671, 940
BstSCI CCNGG 6 cut(s) 213, 285, 669, 756, 900, 938
BstSLI GKGCMC 2 cut(s) 398, 548
BstUI CGCG 3 cut(s) 180, 320, 621
BstV1I GCAGC 6 cut(s) 65, 87, 520, 773, 782, 826
BstX2I RGATCY 4 cut(s) 4, 67, 138, 241
BstXI CCANNNNNNTGG 1 cut(s) 734
BstYI RGATCY 4 cut(s) 4, 67, 138, 241
BstZI CGGCCG 1 cut(s) 765
BtgI CCRYGG 2 cut(s) 843, 855
BtrI CACGTC 2 cut(s) 157, 543
BtsCI GGATG 3 cut(s) 795, 889, 898
Cac8I GCNNGC 3 cut(s) 32, 270, 318
CciNI GCGGCCGC 1 cut(s) 765
CfoI GCGC 5 cut(s) 30, 103, 180, 422, 621
Cfr13I GGNCC 7 cut(s) 345, 394, 395, 723, 754, 850, 936
CseI GACGC 2 cut(s) 482, 820
Csp6I GTAC 6 cut(s) 202, 301, 446, 550, 565, 571
CspCI CAANNNNNGTGG 3 cut(s) 32, 853, 888
CviAII CATG 1 cut(s) 342
CviQI GTAC 6 cut(s) 202, 301, 446, 550, 565, 571
DdeI CTNAG 3 cut(s) 71, 130, 416
DpnI GATC 9 cut(s) 6, 69, 135, 140, 222, 229, 237, 243, 414
DpnII GATC 9 cut(s) 4, 67, 133, 138, 220, 227, 235, 241, 412
EaeI YGGCCR 4 cut(s) 144, 165, 765, 861
EagI CGGCCG 1 cut(s) 765
Eam1104I CTCTTC 1 cut(s) 920
EarI CTCTTC 1 cut(s) 920
EclXI CGGCCG 1 cut(s) 765
Eco130I CCWWGG 1 cut(s) 575
Eco147I AGGCCT 1 cut(s) 677
Eco24I GRGCYC 1 cut(s) 398
Eco31I GGTCTC 1 cut(s) 101
Eco47I GGWCC 2 cut(s) 723, 850
Eco47III AGCGCT 1 cut(s) 29
Eco52I CGGCCG 1 cut(s) 765
EcoO109I RGGNCCY 1 cut(s) 723
EcoRI GAATTC 1 cut(s) 427
EcoRII CCWGG 3 cut(s) 213, 669, 938
EcoT14I CCWWGG 1 cut(s) 575
EcoT22I ATGCAT 1 cut(s) 343
EcoT38I GRGCYC 1 cut(s) 398
ErhI CCWWGG 1 cut(s) 575
FaeI CATG 1 cut(s) 345
FaiI YATR 4 cut(s) 259, 309, 343, 558
FaqI GGGAC 4 cut(s) 736, 836, 925, 945
FatI CATG 1 cut(s) 341
FauI CCCGC 3 cut(s) 614, 713, 731
FblI GTMKAC 1 cut(s) 527
FokI GGATG 3 cut(s) 802, 896, 905
FriOI GRGCYC 1 cut(s) 398
FspBI CTAG 1 cut(s) 576
GlaI GCGC 5 cut(s) 29, 102, 179, 421, 620
GsuI CTGGAG 1 cut(s) 197
HaeII RGCGCY 1 cut(s) 31
HapII CCGG 4 cut(s) 287, 758, 833, 902
HgaI GACGC 2 cut(s) 482, 820
HhaI GCGC 5 cut(s) 30, 103, 180, 422, 621
Hin1I GRCGYC 2 cut(s) 474, 812
Hin1II CATG 1 cut(s) 345
Hin6I GCGC 5 cut(s) 28, 101, 178, 420, 619
HinP1I GCGC 5 cut(s) 28, 101, 178, 420, 619
HincII GTYRAC 1 cut(s) 528
HindII GTYRAC 1 cut(s) 528
HindIII AAGCTT 2 cut(s) 50, 326
HinfI GANTC 4 cut(s) 39, 364, 408, 453
HpaII CCGG 4 cut(s) 287, 758, 833, 902
HphI GGTGA 1 cut(s) 506
Hpy166II GTNNAC 3 cut(s) 184, 528, 583
Hpy188III TCNNGA 4 cut(s) 239, 250, 519, 535
Hpy8I GTNNAC 3 cut(s) 184, 528, 583
Hpy99I CGWCG 8 cut(s) 152, 158, 267, 476, 494, 544, 811, 814
HpyAV CCTTC 3 cut(s) 119, 736, 937
HpyCH4III ACNGT 1 cut(s) 494
HpyCH4IV ACGT 2 cut(s) 156, 542
HpyCH4V TGCA 2 cut(s) 341, 664
HpyF3I CTNAG 3 cut(s) 71, 130, 416
HpySE526I ACGT 2 cut(s) 156, 542
Hsp92I GRCGYC 2 cut(s) 474, 812
Hsp92II CATG 1 cut(s) 345
HspAI GCGC 5 cut(s) 28, 101, 178, 420, 619
KflI GGGWCCC 1 cut(s) 723
Kzo9I GATC 9 cut(s) 4, 67, 133, 138, 220, 227, 235, 241, 412
LmnI GCTCC 2 cut(s) 282, 462
Lsp1109I GCAGC 6 cut(s) 65, 87, 520, 773, 782, 826
LweI GCATC 3 cut(s) 328, 508, 780
MaeI CTAG 1 cut(s) 576
MaeII ACGT 2 cut(s) 156, 542
MaeIII GTNAC 1 cut(s) 83
MalI GATC 9 cut(s) 6, 69, 135, 140, 222, 229, 237, 243, 414
MboI GATC 9 cut(s) 4, 67, 133, 138, 220, 227, 235, 241, 412
MboII GAAGA 3 cut(s) 245, 934, 937
MfeI CAATTG 1 cut(s) 784
MflI RGATCY 4 cut(s) 4, 67, 138, 241
MhlI GDGCHC 4 cut(s) 162, 318, 398, 548
MlsI TGGCCA 1 cut(s) 863
MluCI AATT 8 cut(s) 93, 427, 437, 589, 610, 646, 784, 865
MluI ACGCGT 1 cut(s) 318
MluNI TGGCCA 1 cut(s) 863
MlyI GAGTC 3 cut(s) 358, 417, 462
MmeI TCCRAC 1 cut(s) 381
MnlI CCTC 7 cut(s) 246, 290, 507, 594, 622, 667, 921
Mox20I TGGCCA 1 cut(s) 863
Mph1103I ATGCAT 1 cut(s) 343
MscI TGGCCA 1 cut(s) 863
MslI CAYNNNNRTG 1 cut(s) 732
Msp20I TGGCCA 1 cut(s) 863
MspA1I CMGCKG 2 cut(s) 78, 764
MspI CCGG 4 cut(s) 287, 758, 833, 902
MspR9I CCNGG 6 cut(s) 215, 287, 671, 758, 902, 940
MunI CAATTG 1 cut(s) 784
MvaI CCWGG 3 cut(s) 215, 671, 940
MvnI CGCG 3 cut(s) 180, 320, 621
NciI CCSGG 3 cut(s) 287, 758, 902
NdeII GATC 9 cut(s) 4, 67, 133, 138, 220, 227, 235, 241, 412
NlaIII CATG 1 cut(s) 345
NlaIV GGNNCC 9 cut(s) 6, 396, 464, 605, 724, 725, 756, 852, 899
NmeAIII GCCGAG 5 cut(s) 49, 70, 89, 337, 431
NmuCI GTSAC 1 cut(s) 83
NotI GCGGCCGC 1 cut(s) 765
NsiI ATGCAT 1 cut(s) 343
NspV TTCGAA 1 cut(s) 431
PceI AGGCCT 1 cut(s) 677
PcsI WCGNNNNNNNCGW 4 cut(s) 42, 309, 524, 545
PfeI GAWTC 1 cut(s) 39
Ple19I CGATCG 1 cut(s) 223
PleI GAGTC 3 cut(s) 358, 416, 461
PpsI GAGTC 3 cut(s) 358, 416, 461
PpuMI RGGWCCY 1 cut(s) 723
Psp5II RGGWCCY 1 cut(s) 723
Psp6I CCWGG 3 cut(s) 213, 669, 938
PspGI CCWGG 3 cut(s) 213, 669, 938
PspN4I GGNNCC 9 cut(s) 6, 396, 464, 605, 724, 725, 756, 852, 899
PspOMI GGGCCC 1 cut(s) 394
PspPI GGNCC 7 cut(s) 345, 394, 395, 723, 754, 850, 936
PspPPI RGGWCCY 1 cut(s) 723
PsuI RGATCY 4 cut(s) 4, 67, 138, 241
PvuI CGATCG 1 cut(s) 223
PvuII CAGCTG 1 cut(s) 78
RsaI GTAC 6 cut(s) 203, 302, 447, 551, 566, 572
RsaNI GTAC 6 cut(s) 202, 301, 446, 550, 565, 571
RseI CAYNNNNRTG 1 cut(s) 732
SalI GTCGAC 1 cut(s) 526
Sau3AI GATC 9 cut(s) 4, 67, 133, 138, 220, 227, 235, 241, 412
Sau96I GGNCC 7 cut(s) 345, 394, 395, 723, 754, 850, 936
SchI GAGTC 3 cut(s) 358, 417, 462
ScrFI CCNGG 6 cut(s) 215, 287, 671, 758, 902, 940
SduI GDGCHC 4 cut(s) 162, 318, 398, 548
SfaNI GCATC 3 cut(s) 328, 508, 780
SfuI TTCGAA 1 cut(s) 431
SinI GGWCC 2 cut(s) 723, 850
SmiMI CAYNNNNRTG 1 cut(s) 732
Sse9I AATT 8 cut(s) 93, 427, 437, 589, 610, 646, 784, 865
SseBI AGGCCT 1 cut(s) 677
SspMI CTAG 1 cut(s) 576
StuI AGGCCT 1 cut(s) 677
StyD4I CCNGG 6 cut(s) 213, 285, 669, 756, 900, 938
StyI CCWWGG 1 cut(s) 575
TaaI ACNGT 1 cut(s) 494
TaiI ACGT 2 cut(s) 159, 545
TaqI TCGA 7 cut(s) 219, 262, 411, 431, 518, 527, 806
TaqII GACCGA 1 cut(s) 125
TasI AATT 8 cut(s) 93, 427, 437, 589, 610, 646, 784, 865
TauI GCSGC 9 cut(s) 118, 170, 655, 755, 767, 770, 776, 817, 820
TfiI GAWTC 1 cut(s) 39
TseFI GTSAC 1 cut(s) 83
TseI GCWGC 6 cut(s) 75, 78, 508, 761, 770, 839
Tsp45I GTSAC 1 cut(s) 83
VpaK11BI GGWCC 2 cut(s) 723, 850
XapI RAATTY 2 cut(s) 427, 646
XmaJI CCTAGG 1 cut(s) 575
XmiI GTMKAC 1 cut(s) 527
XspI CTAG 1 cut(s) 576
Zsp2I ATGCAT 1 cut(s) 343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.