DnaJ domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G01710 AT2G01710 |
| fragaria_vesca | FvH4_5g35420 |
| malus_domestica | MD08G1196700.v1.1 MD15G1301600.v1.1 MD15G1384400.v1.1 |
| prunus_persica | Prupe.1G531000_v2.0.a1 |
| pyrus_communis | pycom08g16900 pycom15g34460 |
| rosa_chinensis | RchiOBHm_Chr7g0236821 |
| rosa_laevigata | RLG00000001059 |
| rosa_multiflora | Rmu_sc0002867.1_g000022 Rmu_sc0008851.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00224800 |
| rosa_rugosa | Rorug07G0299600 |
| rosa_samantha | Rh7AG454800 Rh7BG426000 Rh7CG473400 Rh7DG442700 |
| rosa_wichuraiana | Rw7G037750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 603 |
| AccI | GTMKAC | 1 cut(s) | 527 |
| AccII | CGCG | 3 cut(s) | 180, 320, 621 |
| AclWI | GGATC | 3 cut(s) | 12, 222, 249 |
| AcoI | YGGCCR | 4 cut(s) | 144, 165, 765, 861 |
| AcsI | RAATTY | 2 cut(s) | 427, 646 |
| AcyI | GRCGYC | 2 cut(s) | 474, 812 |
| AfaI | GTAC | 6 cut(s) | 203, 302, 447, 551, 566, 572 |
| AfeI | AGCGCT | 1 cut(s) | 29 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 286, 342, 738, 763, 859, 907, 908 |
| AflIII | ACRYGT | 1 cut(s) | 318 |
| AgsI | TTSAA | 1 cut(s) | 325 |
| AjiI | CACGTC | 2 cut(s) | 157, 543 |
| AjnI | CCWGG | 3 cut(s) | 213, 669, 938 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 890, 922 |
| AluBI | AGCT | 3 cut(s) | 52, 78, 328 |
| AluI | AGCT | 3 cut(s) | 52, 78, 328 |
| Alw21I | GWGCWC | 2 cut(s) | 162, 318 |
| Alw26I | GTCTC | 1 cut(s) | 101 |
| AlwI | GGATC | 3 cut(s) | 12, 222, 249 |
| Aor51HI | AGCGCT | 1 cut(s) | 29 |
| ApaI | GGGCCC | 1 cut(s) | 398 |
| ApeKI | GCWGC | 6 cut(s) | 75, 78, 508, 761, 770, 839 |
| ApoI | RAATTY | 2 cut(s) | 427, 646 |
| AspA2I | CCTAGG | 1 cut(s) | 575 |
| AspLEI | GCGC | 5 cut(s) | 30, 103, 180, 422, 621 |
| AspS9I | GGNCC | 7 cut(s) | 345, 394, 395, 723, 754, 850, 936 |
| AsuC2I | CCSGG | 3 cut(s) | 287, 758, 902 |
| AsuHPI | GGTGA | 1 cut(s) | 506 |
| AsuII | TTCGAA | 1 cut(s) | 431 |
| AvaII | GGWCC | 2 cut(s) | 723, 850 |
| AvrII | CCTAGG | 1 cut(s) | 575 |
| BaeGI | GKGCMC | 2 cut(s) | 398, 548 |
| BalI | TGGCCA | 1 cut(s) | 863 |
| BamHI | GGATCC | 1 cut(s) | 4 |
| BanI | GGYRCC | 1 cut(s) | 603 |
| BanII | GRGCYC | 1 cut(s) | 398 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 362, 394 |
| Bbv12I | GWGCWC | 2 cut(s) | 162, 318 |
| BbvI | GCAGC | 6 cut(s) | 65, 87, 520, 773, 782, 826 |
| BccI | CCATC | 3 cut(s) | 700, 874, 887 |
| BceAI | ACGGC | 8 cut(s) | 66, 131, 191, 281, 332, 464, 861, 950 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 411, 421, 445, 455 |
| BciT130I | CCWGG | 3 cut(s) | 215, 671, 940 |
| BcnI | CCSGG | 3 cut(s) | 287, 758, 902 |
| BcoDI | GTCTC | 1 cut(s) | 101 |
| BfaI | CTAG | 1 cut(s) | 576 |
| BfoI | RGCGCY | 1 cut(s) | 31 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 448 |
| BglII | AGATCT | 2 cut(s) | 67, 138 |
| BlnI | CCTAGG | 1 cut(s) | 575 |
| Bme1390I | CCNGG | 6 cut(s) | 215, 287, 671, 758, 902, 940 |
| Bme18I | GGWCC | 2 cut(s) | 723, 850 |
| BmgBI | CACGTC | 2 cut(s) | 157, 543 |
| BmgT120I | GGNCC | 7 cut(s) | 345, 394, 395, 723, 754, 850, 936 |
| BmiI | GGNNCC | 9 cut(s) | 6, 396, 464, 605, 724, 725, 756, 852, 899 |
| BmrFI | CCNGG | 6 cut(s) | 215, 287, 671, 758, 902, 940 |
| BmsI | GCATC | 3 cut(s) | 328, 508, 780 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 399, 431, 814, 846 |
| BpmI | CTGGAG | 1 cut(s) | 197 |
| Bpu14I | TTCGAA | 1 cut(s) | 431 |
| BpuMI | CCSGG | 3 cut(s) | 287, 758, 902 |
| BsaBI | GATNNNNATC | 1 cut(s) | 240 |
| BsaHI | GRCGYC | 2 cut(s) | 474, 812 |
| BsaI | GGTCTC | 1 cut(s) | 101 |
| BsaJI | CCNNGG | 5 cut(s) | 575, 756, 843, 855, 938 |
| BsaWI | WCCGGW | 1 cut(s) | 832 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 286, 342, 738, 763, 859, 907, 908 |
| Bse1I | ACTGG | 1 cut(s) | 203 |
| Bse8I | GATNNNNATC | 1 cut(s) | 240 |
| BseBI | CCWGG | 3 cut(s) | 215, 671, 940 |
| BseDI | CCNNGG | 5 cut(s) | 575, 756, 843, 855, 938 |
| BseGI | GGATG | 3 cut(s) | 795, 889, 898 |
| BseJI | GATNNNNATC | 1 cut(s) | 240 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 286, 342, 738, 763, 859, 907, 908 |
| BseMII | CTCAG | 3 cut(s) | 62, 144, 430 |
| BseNI | ACTGG | 1 cut(s) | 203 |
| BseRI | GAGGAG | 1 cut(s) | 269 |
| BseSI | GKGCMC | 2 cut(s) | 398, 548 |
| BseX3I | CGGCCG | 1 cut(s) | 765 |
| BseXI | GCAGC | 6 cut(s) | 65, 87, 520, 773, 782, 826 |
| Bsh1236I | CGCG | 3 cut(s) | 180, 320, 621 |
| Bsh1285I | CGRYCG | 2 cut(s) | 223, 768 |
| BshNI | GGYRCC | 1 cut(s) | 603 |
| BsiEI | CGRYCG | 2 cut(s) | 223, 768 |
| BsiHKAI | GWGCWC | 2 cut(s) | 162, 318 |
| BsiSI | CCGG | 4 cut(s) | 287, 758, 833, 902 |
| BslFI | GGGAC | 4 cut(s) | 736, 836, 925, 945 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 286, 342, 738, 763, 859, 907, 908 |
| BsmAI | GTCTC | 1 cut(s) | 101 |
| BsmFI | GGGAC | 4 cut(s) | 736, 836, 925, 945 |
| Bso31I | GGTCTC | 1 cut(s) | 101 |
| Bsp119I | TTCGAA | 1 cut(s) | 431 |
| Bsp120I | GGGCCC | 1 cut(s) | 394 |
| Bsp1286I | GDGCHC | 4 cut(s) | 162, 318, 398, 548 |
| Bsp143I | GATC | 9 cut(s) | 4, 67, 133, 138, 220, 227, 235, 241, 412 |
| BspCNI | CTCAG | 3 cut(s) | 63, 143, 429 |
| BspFNI | CGCG | 3 cut(s) | 180, 320, 621 |
| BspLI | GGNNCC | 9 cut(s) | 6, 396, 464, 605, 724, 725, 756, 852, 899 |
| BspPI | GGATC | 3 cut(s) | 12, 222, 249 |
| BspT104I | TTCGAA | 1 cut(s) | 431 |
| BspT107I | GGYRCC | 1 cut(s) | 603 |
| BspTNI | GGTCTC | 1 cut(s) | 101 |
| BsrI | ACTGG | 1 cut(s) | 203 |
| BssECI | CCNNGG | 5 cut(s) | 575, 756, 843, 855, 938 |
| BssMI | GATC | 9 cut(s) | 4, 67, 133, 138, 220, 227, 235, 241, 412 |
| BssNI | GRCGYC | 2 cut(s) | 474, 812 |
| BssT1I | CCWWGG | 1 cut(s) | 575 |
| Bst2UI | CCWGG | 3 cut(s) | 215, 671, 940 |
| Bst4CI | ACNGT | 1 cut(s) | 494 |
| Bst6I | CTCTTC | 1 cut(s) | 920 |
| BstACI | GRCGYC | 2 cut(s) | 474, 812 |
| BstBI | TTCGAA | 1 cut(s) | 431 |
| BstC8I | GCNNGC | 3 cut(s) | 32, 270, 318 |
| BstDEI | CTNAG | 3 cut(s) | 71, 130, 416 |
| BstDSI | CCRYGG | 2 cut(s) | 843, 855 |
| BstF5I | GGATG | 3 cut(s) | 795, 889, 898 |
| BstFNI | CGCG | 3 cut(s) | 180, 320, 621 |
| BstH2I | RGCGCY | 1 cut(s) | 31 |
| BstHHI | GCGC | 5 cut(s) | 30, 103, 180, 422, 621 |
| BstKTI | GATC | 9 cut(s) | 7, 70, 136, 141, 223, 230, 238, 244, 415 |
| BstMAI | GTCTC | 1 cut(s) | 101 |
| BstMBI | GATC | 9 cut(s) | 4, 67, 133, 138, 220, 227, 235, 241, 412 |
| BstMCI | CGRYCG | 2 cut(s) | 223, 768 |
| BstNI | CCWGG | 3 cut(s) | 215, 671, 940 |
| BstSCI | CCNGG | 6 cut(s) | 213, 285, 669, 756, 900, 938 |
| BstSLI | GKGCMC | 2 cut(s) | 398, 548 |
| BstUI | CGCG | 3 cut(s) | 180, 320, 621 |
| BstV1I | GCAGC | 6 cut(s) | 65, 87, 520, 773, 782, 826 |
| BstX2I | RGATCY | 4 cut(s) | 4, 67, 138, 241 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 734 |
| BstYI | RGATCY | 4 cut(s) | 4, 67, 138, 241 |
| BstZI | CGGCCG | 1 cut(s) | 765 |
| BtgI | CCRYGG | 2 cut(s) | 843, 855 |
| BtrI | CACGTC | 2 cut(s) | 157, 543 |
| BtsCI | GGATG | 3 cut(s) | 795, 889, 898 |
| Cac8I | GCNNGC | 3 cut(s) | 32, 270, 318 |
| CciNI | GCGGCCGC | 1 cut(s) | 765 |
| CfoI | GCGC | 5 cut(s) | 30, 103, 180, 422, 621 |
| Cfr13I | GGNCC | 7 cut(s) | 345, 394, 395, 723, 754, 850, 936 |
| CseI | GACGC | 2 cut(s) | 482, 820 |
| Csp6I | GTAC | 6 cut(s) | 202, 301, 446, 550, 565, 571 |
| CspCI | CAANNNNNGTGG | 3 cut(s) | 32, 853, 888 |
| CviAII | CATG | 1 cut(s) | 342 |
| CviQI | GTAC | 6 cut(s) | 202, 301, 446, 550, 565, 571 |
| DdeI | CTNAG | 3 cut(s) | 71, 130, 416 |
| DpnI | GATC | 9 cut(s) | 6, 69, 135, 140, 222, 229, 237, 243, 414 |
| DpnII | GATC | 9 cut(s) | 4, 67, 133, 138, 220, 227, 235, 241, 412 |
| EaeI | YGGCCR | 4 cut(s) | 144, 165, 765, 861 |
| EagI | CGGCCG | 1 cut(s) | 765 |
| Eam1104I | CTCTTC | 1 cut(s) | 920 |
| EarI | CTCTTC | 1 cut(s) | 920 |
| EclXI | CGGCCG | 1 cut(s) | 765 |
| Eco130I | CCWWGG | 1 cut(s) | 575 |
| Eco147I | AGGCCT | 1 cut(s) | 677 |
| Eco24I | GRGCYC | 1 cut(s) | 398 |
| Eco31I | GGTCTC | 1 cut(s) | 101 |
| Eco47I | GGWCC | 2 cut(s) | 723, 850 |
| Eco47III | AGCGCT | 1 cut(s) | 29 |
| Eco52I | CGGCCG | 1 cut(s) | 765 |
| EcoO109I | RGGNCCY | 1 cut(s) | 723 |
| EcoRI | GAATTC | 1 cut(s) | 427 |
| EcoRII | CCWGG | 3 cut(s) | 213, 669, 938 |
| EcoT14I | CCWWGG | 1 cut(s) | 575 |
| EcoT22I | ATGCAT | 1 cut(s) | 343 |
| EcoT38I | GRGCYC | 1 cut(s) | 398 |
| ErhI | CCWWGG | 1 cut(s) | 575 |
| FaeI | CATG | 1 cut(s) | 345 |
| FaiI | YATR | 4 cut(s) | 259, 309, 343, 558 |
| FaqI | GGGAC | 4 cut(s) | 736, 836, 925, 945 |
| FatI | CATG | 1 cut(s) | 341 |
| FauI | CCCGC | 3 cut(s) | 614, 713, 731 |
| FblI | GTMKAC | 1 cut(s) | 527 |
| FokI | GGATG | 3 cut(s) | 802, 896, 905 |
| FriOI | GRGCYC | 1 cut(s) | 398 |
| FspBI | CTAG | 1 cut(s) | 576 |
| GlaI | GCGC | 5 cut(s) | 29, 102, 179, 421, 620 |
| GsuI | CTGGAG | 1 cut(s) | 197 |
| HaeII | RGCGCY | 1 cut(s) | 31 |
| HapII | CCGG | 4 cut(s) | 287, 758, 833, 902 |
| HgaI | GACGC | 2 cut(s) | 482, 820 |
| HhaI | GCGC | 5 cut(s) | 30, 103, 180, 422, 621 |
| Hin1I | GRCGYC | 2 cut(s) | 474, 812 |
| Hin1II | CATG | 1 cut(s) | 345 |
| Hin6I | GCGC | 5 cut(s) | 28, 101, 178, 420, 619 |
| HinP1I | GCGC | 5 cut(s) | 28, 101, 178, 420, 619 |
| HincII | GTYRAC | 1 cut(s) | 528 |
| HindII | GTYRAC | 1 cut(s) | 528 |
| HindIII | AAGCTT | 2 cut(s) | 50, 326 |
| HinfI | GANTC | 4 cut(s) | 39, 364, 408, 453 |
| HpaII | CCGG | 4 cut(s) | 287, 758, 833, 902 |
| HphI | GGTGA | 1 cut(s) | 506 |
| Hpy166II | GTNNAC | 3 cut(s) | 184, 528, 583 |
| Hpy188III | TCNNGA | 4 cut(s) | 239, 250, 519, 535 |
| Hpy8I | GTNNAC | 3 cut(s) | 184, 528, 583 |
| Hpy99I | CGWCG | 8 cut(s) | 152, 158, 267, 476, 494, 544, 811, 814 |
| HpyAV | CCTTC | 3 cut(s) | 119, 736, 937 |
| HpyCH4III | ACNGT | 1 cut(s) | 494 |
| HpyCH4IV | ACGT | 2 cut(s) | 156, 542 |
| HpyCH4V | TGCA | 2 cut(s) | 341, 664 |
| HpyF3I | CTNAG | 3 cut(s) | 71, 130, 416 |
| HpySE526I | ACGT | 2 cut(s) | 156, 542 |
| Hsp92I | GRCGYC | 2 cut(s) | 474, 812 |
| Hsp92II | CATG | 1 cut(s) | 345 |
| HspAI | GCGC | 5 cut(s) | 28, 101, 178, 420, 619 |
| KflI | GGGWCCC | 1 cut(s) | 723 |
| Kzo9I | GATC | 9 cut(s) | 4, 67, 133, 138, 220, 227, 235, 241, 412 |
| LmnI | GCTCC | 2 cut(s) | 282, 462 |
| Lsp1109I | GCAGC | 6 cut(s) | 65, 87, 520, 773, 782, 826 |
| LweI | GCATC | 3 cut(s) | 328, 508, 780 |
| MaeI | CTAG | 1 cut(s) | 576 |
| MaeII | ACGT | 2 cut(s) | 156, 542 |
| MaeIII | GTNAC | 1 cut(s) | 83 |
| MalI | GATC | 9 cut(s) | 6, 69, 135, 140, 222, 229, 237, 243, 414 |
| MboI | GATC | 9 cut(s) | 4, 67, 133, 138, 220, 227, 235, 241, 412 |
| MboII | GAAGA | 3 cut(s) | 245, 934, 937 |
| MfeI | CAATTG | 1 cut(s) | 784 |
| MflI | RGATCY | 4 cut(s) | 4, 67, 138, 241 |
| MhlI | GDGCHC | 4 cut(s) | 162, 318, 398, 548 |
| MlsI | TGGCCA | 1 cut(s) | 863 |
| MluCI | AATT | 8 cut(s) | 93, 427, 437, 589, 610, 646, 784, 865 |
| MluI | ACGCGT | 1 cut(s) | 318 |
| MluNI | TGGCCA | 1 cut(s) | 863 |
| MlyI | GAGTC | 3 cut(s) | 358, 417, 462 |
| MmeI | TCCRAC | 1 cut(s) | 381 |
| MnlI | CCTC | 7 cut(s) | 246, 290, 507, 594, 622, 667, 921 |
| Mox20I | TGGCCA | 1 cut(s) | 863 |
| Mph1103I | ATGCAT | 1 cut(s) | 343 |
| MscI | TGGCCA | 1 cut(s) | 863 |
| MslI | CAYNNNNRTG | 1 cut(s) | 732 |
| Msp20I | TGGCCA | 1 cut(s) | 863 |
| MspA1I | CMGCKG | 2 cut(s) | 78, 764 |
| MspI | CCGG | 4 cut(s) | 287, 758, 833, 902 |
| MspR9I | CCNGG | 6 cut(s) | 215, 287, 671, 758, 902, 940 |
| MunI | CAATTG | 1 cut(s) | 784 |
| MvaI | CCWGG | 3 cut(s) | 215, 671, 940 |
| MvnI | CGCG | 3 cut(s) | 180, 320, 621 |
| NciI | CCSGG | 3 cut(s) | 287, 758, 902 |
| NdeII | GATC | 9 cut(s) | 4, 67, 133, 138, 220, 227, 235, 241, 412 |
| NlaIII | CATG | 1 cut(s) | 345 |
| NlaIV | GGNNCC | 9 cut(s) | 6, 396, 464, 605, 724, 725, 756, 852, 899 |
| NmeAIII | GCCGAG | 5 cut(s) | 49, 70, 89, 337, 431 |
| NmuCI | GTSAC | 1 cut(s) | 83 |
| NotI | GCGGCCGC | 1 cut(s) | 765 |
| NsiI | ATGCAT | 1 cut(s) | 343 |
| NspV | TTCGAA | 1 cut(s) | 431 |
| PceI | AGGCCT | 1 cut(s) | 677 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 42, 309, 524, 545 |
| PfeI | GAWTC | 1 cut(s) | 39 |
| Ple19I | CGATCG | 1 cut(s) | 223 |
| PleI | GAGTC | 3 cut(s) | 358, 416, 461 |
| PpsI | GAGTC | 3 cut(s) | 358, 416, 461 |
| PpuMI | RGGWCCY | 1 cut(s) | 723 |
| Psp5II | RGGWCCY | 1 cut(s) | 723 |
| Psp6I | CCWGG | 3 cut(s) | 213, 669, 938 |
| PspGI | CCWGG | 3 cut(s) | 213, 669, 938 |
| PspN4I | GGNNCC | 9 cut(s) | 6, 396, 464, 605, 724, 725, 756, 852, 899 |
| PspOMI | GGGCCC | 1 cut(s) | 394 |
| PspPI | GGNCC | 7 cut(s) | 345, 394, 395, 723, 754, 850, 936 |
| PspPPI | RGGWCCY | 1 cut(s) | 723 |
| PsuI | RGATCY | 4 cut(s) | 4, 67, 138, 241 |
| PvuI | CGATCG | 1 cut(s) | 223 |
| PvuII | CAGCTG | 1 cut(s) | 78 |
| RsaI | GTAC | 6 cut(s) | 203, 302, 447, 551, 566, 572 |
| RsaNI | GTAC | 6 cut(s) | 202, 301, 446, 550, 565, 571 |
| RseI | CAYNNNNRTG | 1 cut(s) | 732 |
| SalI | GTCGAC | 1 cut(s) | 526 |
| Sau3AI | GATC | 9 cut(s) | 4, 67, 133, 138, 220, 227, 235, 241, 412 |
| Sau96I | GGNCC | 7 cut(s) | 345, 394, 395, 723, 754, 850, 936 |
| SchI | GAGTC | 3 cut(s) | 358, 417, 462 |
| ScrFI | CCNGG | 6 cut(s) | 215, 287, 671, 758, 902, 940 |
| SduI | GDGCHC | 4 cut(s) | 162, 318, 398, 548 |
| SfaNI | GCATC | 3 cut(s) | 328, 508, 780 |
| SfuI | TTCGAA | 1 cut(s) | 431 |
| SinI | GGWCC | 2 cut(s) | 723, 850 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 732 |
| Sse9I | AATT | 8 cut(s) | 93, 427, 437, 589, 610, 646, 784, 865 |
| SseBI | AGGCCT | 1 cut(s) | 677 |
| SspMI | CTAG | 1 cut(s) | 576 |
| StuI | AGGCCT | 1 cut(s) | 677 |
| StyD4I | CCNGG | 6 cut(s) | 213, 285, 669, 756, 900, 938 |
| StyI | CCWWGG | 1 cut(s) | 575 |
| TaaI | ACNGT | 1 cut(s) | 494 |
| TaiI | ACGT | 2 cut(s) | 159, 545 |
| TaqI | TCGA | 7 cut(s) | 219, 262, 411, 431, 518, 527, 806 |
| TaqII | GACCGA | 1 cut(s) | 125 |
| TasI | AATT | 8 cut(s) | 93, 427, 437, 589, 610, 646, 784, 865 |
| TauI | GCSGC | 9 cut(s) | 118, 170, 655, 755, 767, 770, 776, 817, 820 |
| TfiI | GAWTC | 1 cut(s) | 39 |
| TseFI | GTSAC | 1 cut(s) | 83 |
| TseI | GCWGC | 6 cut(s) | 75, 78, 508, 761, 770, 839 |
| Tsp45I | GTSAC | 1 cut(s) | 83 |
| VpaK11BI | GGWCC | 2 cut(s) | 723, 850 |
| XapI | RAATTY | 2 cut(s) | 427, 646 |
| XmaJI | CCTAGG | 1 cut(s) | 575 |
| XmiI | GTMKAC | 1 cut(s) | 527 |
| XspI | CTAG | 1 cut(s) | 576 |
| Zsp2I | ATGCAT | 1 cut(s) | 343 |