RLG00000001059

DnaJ domain

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
9908794 .. 9909795
1002 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001059

Sequence Viewer

Length: 1002 bp
ATGGACCACAATCCGAATAGAGCCGAAGCCGAGCGGTTACTCGGAATCGCCGAGAAGCTCTTACAGAACCGAGATCTGAGCAGCTCGCGCGACTTCGCCATTCTGGCGCAAGAAACAGAGCCGCTATTGGACGGCTCCGATCAGATCTTAGCCGTCGTCGACGTCCTCCTGGCCGCCGATAAGCGCGTAAACAACCACCACGACTGGTACTCCATTCTCCAGGTGGATCGCCGATCCGACGACCACGATCTGATCAAGAGATCGTACCGGCGGCTGGCGTTGCTCCTCCACCCGGACAAGAACAAATACGCCTTCGCCGAGCACGCCTTCAAGCTCGTCGCCGATGCATGGGCTGTTCTCTCCGACCCGGCCAAGAAGCCGGTCTTCGACACCGAGCTGGGCCTCTACAGCCCAGTCGATCTCACCGCCGCCGCAGCAGCAGCCTCCAATCCGAACAAGCTTCCGGTGCGGCGGGGGCAGAATGCTCGAAACGACGGCGTTTCGGACGAGCAGCAGCAAAATCAACAGAGGTCGAGATTATCGAGCTTCTGGACGGCGTGCCCTTACTGTTATATACTGTATGAGTACCCTAGGGTTTATGAGAATTGCTGTTTGAGGTGTCAGAATTGTAAGAGAGGGTTTGAGGCCGTTTTGGTCCCGAATTTGCCGCCATTGGTGCAAGGCCAGGATGCCTATTACTGTTGCTGGGGCTTCTTCCCCATGGGGTTTGTTGGTGGCAGCTCAGCCAATGGAGGAAAGGGAAAGGCGGCTGCCACCGCGCCGGCCTTCCCCACTTGGATGCCACCGATTTTCACAACGCCGCCGCCGCAGAATAAAACCCCTGAGACTTCCAGGGCACCCCCTGTGACTGTGCCGCCGCCGCCTGCCCCGGTGCCGGTGGCGGCAACGGGTGATGGAATGTTGAATTTTTCGGGTGGGAACTCGAATTCAGGGACAGGGACTAATCCAAAGAAGAGGGGACGGCCGCGGAAGTTAACTTAG

Protein Analysis

334

Amino Acids

36.62

Weight (kDa)

8.71

Isoelectric Point (pI)

51.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 68 - 130 5.9e-18 DnaJ domain
Zn_ribbon_20 PF23551 183 - 217 3.5e-08 Zinc beta-ribbon domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0011428)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 165
AccB1I GGYRCC 2 cut(s) 856, 892
AccBSI CCGCTC 1 cut(s) 34
AccI GTMKAC 1 cut(s) 159
AccII CGCG 5 cut(s) 88, 90, 186, 779, 988
AclWI GGATC 2 cut(s) 228, 234
AcoI YGGCCR 3 cut(s) 171, 369, 983
AcsI RAATTY 3 cut(s) 661, 925, 946
AcyI GRCGYC 1 cut(s) 162
AfaI GTAC 3 cut(s) 209, 266, 587
AfiI CCNNNNNNNGG 4 cut(s) 274, 292, 348, 895
AgsI TTSAA 2 cut(s) 331, 925
AjnI CCWGG 4 cut(s) 168, 219, 684, 851
AluBI AGCT 7 cut(s) 58, 84, 334, 397, 460, 546, 741
AluI AGCT 7 cut(s) 58, 84, 334, 397, 460, 546, 741
Alw21I GWGCWC 1 cut(s) 324
Alw26I GTCTC 1 cut(s) 839
AlwI GGATC 2 cut(s) 228, 234
AoxI GGCC 7 cut(s) 171, 369, 400, 645, 682, 783, 983
ApeKI GCWGC 8 cut(s) 81, 434, 437, 440, 511, 514, 738, 770
ApoI RAATTY 3 cut(s) 661, 925, 946
AspA2I CCTAGG 1 cut(s) 590
AspLEI GCGC 4 cut(s) 90, 109, 186, 781
AspS9I GGNCC 3 cut(s) 4, 400, 655
AsuC2I CCSGG 3 cut(s) 293, 368, 890
AsuHPI GGTGA 2 cut(s) 415, 923
AvaII GGWCC 2 cut(s) 4, 655
AvrII CCTAGG 1 cut(s) 590
BaeGI GKGCMC 2 cut(s) 563, 859
BanI GGYRCC 2 cut(s) 856, 892
BbsI GAAGAC 1 cut(s) 376
Bbv12I GWGCWC 1 cut(s) 324
BbvI GCAGC 8 cut(s) 93, 446, 449, 452, 523, 526, 750, 757
BccI CCATC 1 cut(s) 908
BceAI ACGGC 6 cut(s) 137, 148, 511, 570, 632, 998
BcgI CGANNNNNNTGC 2 cut(s) 467, 501
BciT130I CCWGG 4 cut(s) 170, 221, 686, 853
BclI TGATCA 1 cut(s) 252
BcnI CCSGG 3 cut(s) 293, 368, 890
BcoDI GTCTC 1 cut(s) 839
BfaI CTAG 1 cut(s) 591
BfmI CTRYAG 1 cut(s) 406
BglI GCCNNNNNGGC 1 cut(s) 104
BglII AGATCT 2 cut(s) 73, 144
BlnI CCTAGG 1 cut(s) 590
BlpI GCTNAGC 1 cut(s) 742
Bme1390I CCNGG 7 cut(s) 170, 221, 293, 368, 686, 853, 890
Bme18I GGWCC 2 cut(s) 4, 655
BmgT120I GGNCC 3 cut(s) 4, 400, 655
BmiI GGNNCC 4 cut(s) 136, 657, 858, 894
BmrFI CCNGG 7 cut(s) 170, 221, 293, 368, 686, 853, 890
BmrI ACTGGG 1 cut(s) 407
BmsI GCATC 3 cut(s) 334, 679, 789
BmuI ACTGGG 1 cut(s) 407
BpiI GAAGAC 1 cut(s) 376
BpmI CTGGAG 1 cut(s) 203
Bpu1102I GCTNAGC 1 cut(s) 742
BpuMI CCSGG 3 cut(s) 293, 368, 890
BsaHI GRCGYC 1 cut(s) 162
BsaJI CCNNGG 5 cut(s) 590, 720, 852, 888, 986
BsaWI WCCGGW 1 cut(s) 463
BsaXI ACNNNNNCTCC 2 cut(s) 194, 224
Bsc4I CCNNNNNNNGG 4 cut(s) 274, 292, 348, 895
Bse118I RCCGGY 4 cut(s) 267, 379, 781, 895
Bse1I ACTGG 2 cut(s) 209, 413
BseBI CCWGG 4 cut(s) 170, 221, 686, 853
BseDI CCNNGG 5 cut(s) 590, 720, 852, 888, 986
BseGI GGATG 2 cut(s) 694, 804
BseLI CCNNNNNNNGG 4 cut(s) 274, 292, 348, 895
BseMII CTCAG 3 cut(s) 68, 756, 834
BseNI ACTGG 2 cut(s) 209, 413
BseRI GAGGAG 1 cut(s) 275
BseSI GKGCMC 2 cut(s) 563, 859
BseX3I CGGCCG 1 cut(s) 983
BseXI GCAGC 8 cut(s) 93, 446, 449, 452, 523, 526, 750, 757
BseYI CCCAGC 2 cut(s) 397, 705
Bsh1236I CGCG 5 cut(s) 88, 90, 186, 779, 988
Bsh1285I CGRYCG 1 cut(s) 986
BshFI GGCC 7 cut(s) 173, 371, 402, 647, 684, 785, 985
BshNI GGYRCC 2 cut(s) 856, 892
BsiEI CGRYCG 1 cut(s) 986
BsiHKAI GWGCWC 1 cut(s) 324
BsiSI CCGG 8 cut(s) 268, 293, 368, 380, 464, 782, 890, 896
BslFI GGGAC 4 cut(s) 641, 967, 973, 993
BslI CCNNNNNNNGG 4 cut(s) 274, 292, 348, 895
BsmAI GTCTC 1 cut(s) 839
BsmFI GGGAC 4 cut(s) 641, 967, 973, 993
BsmI GAATGC 1 cut(s) 487
BsnI GGCC 7 cut(s) 173, 371, 402, 647, 684, 785, 985
Bsp1286I GDGCHC 3 cut(s) 324, 563, 859
Bsp143I GATC 9 cut(s) 73, 139, 144, 226, 233, 247, 252, 260, 418
Bsp1720I GCTNAGC 1 cut(s) 742
Bsp19I CCATGG 1 cut(s) 720
BspANI GGCC 7 cut(s) 173, 371, 402, 647, 684, 785, 985
BspCNI CTCAG 3 cut(s) 69, 755, 835
BspFNI CGCG 5 cut(s) 88, 90, 186, 779, 988
BspLI GGNNCC 4 cut(s) 136, 657, 858, 894
BspPI GGATC 2 cut(s) 228, 234
BspT107I GGYRCC 2 cut(s) 856, 892
BsrBI CCGCTC 1 cut(s) 34
BsrFI RCCGGY 4 cut(s) 267, 379, 781, 895
BsrI ACTGG 2 cut(s) 209, 413
BssAI RCCGGY 4 cut(s) 267, 379, 781, 895
BssECI CCNNGG 5 cut(s) 590, 720, 852, 888, 986
BssMI GATC 9 cut(s) 73, 139, 144, 226, 233, 247, 252, 260, 418
BssNI GRCGYC 1 cut(s) 162
BssT1I CCWWGG 2 cut(s) 590, 720
Bst2UI CCWGG 4 cut(s) 170, 221, 686, 853
Bst4CI ACNGT 4 cut(s) 569, 579, 701, 871
Bst6I CTCTTC 1 cut(s) 968
BstACI GRCGYC 1 cut(s) 162
BstC8I GCNNGC 6 cut(s) 86, 276, 324, 559, 783, 885
BstDEI CTNAG 5 cut(s) 77, 148, 742, 843, 999
BstDSI CCRYGG 2 cut(s) 720, 986
BstF5I GGATG 2 cut(s) 694, 804
BstFNI CGCG 5 cut(s) 88, 90, 186, 779, 988
BstHHI GCGC 4 cut(s) 90, 109, 186, 781
BstKTI GATC 9 cut(s) 76, 142, 147, 229, 236, 250, 255, 263, 421
BstMAI GTCTC 1 cut(s) 839
BstMBI GATC 9 cut(s) 73, 139, 144, 226, 233, 247, 252, 260, 418
BstMCI CGRYCG 1 cut(s) 986
BstNI CCWGG 4 cut(s) 170, 221, 686, 853
BstSCI CCNGG 7 cut(s) 168, 219, 291, 366, 684, 851, 888
BstSFI CTRYAG 1 cut(s) 406
BstSLI GKGCMC 2 cut(s) 563, 859
BstUI CGCG 5 cut(s) 88, 90, 186, 779, 988
BstV1I GCAGC 8 cut(s) 93, 446, 449, 452, 523, 526, 750, 757
BstV2I GAAGAC 1 cut(s) 376
BstX2I RGATCY 2 cut(s) 73, 144
BstYI RGATCY 2 cut(s) 73, 144
BstZI CGGCCG 1 cut(s) 983
BsuRI GGCC 7 cut(s) 173, 371, 402, 647, 684, 785, 985
BtgI CCRYGG 2 cut(s) 720, 986
BtsCI GGATG 2 cut(s) 694, 804
Cac8I GCNNGC 6 cut(s) 86, 276, 324, 559, 783, 885
CfoI GCGC 4 cut(s) 90, 109, 186, 781
Cfr10I RCCGGY 4 cut(s) 267, 379, 781, 895
Cfr13I GGNCC 3 cut(s) 4, 400, 655
Cfr42I CCGCGG 1 cut(s) 989
Csp6I GTAC 3 cut(s) 208, 265, 586
CviAII CATG 2 cut(s) 348, 721
CviQI GTAC 3 cut(s) 208, 265, 586
DdeI CTNAG 5 cut(s) 77, 148, 742, 843, 999
DpnI GATC 9 cut(s) 75, 141, 146, 228, 235, 249, 254, 262, 420
DpnII GATC 9 cut(s) 73, 139, 144, 226, 233, 247, 252, 260, 418
EaeI YGGCCR 3 cut(s) 171, 369, 983
EagI CGGCCG 1 cut(s) 983
Eam1104I CTCTTC 1 cut(s) 968
EarI CTCTTC 1 cut(s) 968
EclXI CGGCCG 1 cut(s) 983
Eco130I CCWWGG 2 cut(s) 590, 720
Eco47I GGWCC 2 cut(s) 4, 655
Eco52I CGGCCG 1 cut(s) 983
EcoRI GAATTC 1 cut(s) 946
EcoRII CCWGG 4 cut(s) 168, 219, 684, 851
EcoT14I CCWWGG 2 cut(s) 590, 720
EcoT22I ATGCAT 1 cut(s) 349
ErhI CCWWGG 2 cut(s) 590, 720
FaeI CATG 2 cut(s) 351, 724
FaiI YATR 6 cut(s) 349, 573, 575, 582, 600, 722
FalI AAGNNNNNCTT 2 cut(s) 368, 400
FaqI GGGAC 4 cut(s) 641, 967, 973, 993
FatI CATG 2 cut(s) 347, 720
FauI CCCGC 1 cut(s) 465
FbaI TGATCA 1 cut(s) 252
FblI GTMKAC 1 cut(s) 159
FokI GGATG 2 cut(s) 701, 811
FspBI CTAG 1 cut(s) 591
GlaI GCGC 4 cut(s) 89, 108, 185, 780
GsaI CCCAGC 2 cut(s) 401, 709
GsuI CTGGAG 1 cut(s) 203
HaeIII GGCC 7 cut(s) 173, 371, 402, 647, 684, 785, 985
HapII CCGG 8 cut(s) 268, 293, 368, 380, 464, 782, 890, 896
HhaI GCGC 4 cut(s) 90, 109, 186, 781
Hin1I GRCGYC 1 cut(s) 162
Hin1II CATG 2 cut(s) 351, 724
Hin6I GCGC 4 cut(s) 88, 107, 184, 779
HinP1I GCGC 4 cut(s) 88, 107, 184, 779
HincII GTYRAC 2 cut(s) 160, 996
HindII GTYRAC 2 cut(s) 160, 996
HindIII AAGCTT 1 cut(s) 458
HinfI GANTC 1 cut(s) 45
HpaI GTTAAC 1 cut(s) 996
HpaII CCGG 8 cut(s) 268, 293, 368, 380, 464, 782, 890, 896
HphI GGTGA 2 cut(s) 415, 923
Hpy166II GTNNAC 3 cut(s) 160, 190, 996
Hpy188III TCNNGA 4 cut(s) 256, 534, 550, 658
Hpy8I GTNNAC 3 cut(s) 160, 190, 996
Hpy99I CGWCG 6 cut(s) 158, 161, 164, 242, 341, 497
HpyAV CCTTC 3 cut(s) 322, 337, 796
HpyCH4III ACNGT 4 cut(s) 569, 579, 701, 871
HpyCH4IV ACGT 1 cut(s) 162
HpyCH4V TGCA 2 cut(s) 347, 679
HpyF3I CTNAG 5 cut(s) 77, 148, 742, 843, 999
HpySE526I ACGT 1 cut(s) 162
Hsp92I GRCGYC 1 cut(s) 162
Hsp92II CATG 2 cut(s) 351, 724
HspAI GCGC 4 cut(s) 88, 107, 184, 779
KroI GCCGGC 1 cut(s) 781
KroNI GCCGGC 1 cut(s) 783
Ksp22I TGATCA 1 cut(s) 252
KspAI GTTAAC 1 cut(s) 996
KspI CCGCGG 1 cut(s) 989
Kzo9I GATC 9 cut(s) 73, 139, 144, 226, 233, 247, 252, 260, 418
LmnI GCTCC 2 cut(s) 140, 288
Lsp1109I GCAGC 8 cut(s) 93, 446, 449, 452, 523, 526, 750, 757
LweI GCATC 3 cut(s) 334, 679, 789
MaeI CTAG 1 cut(s) 591
MaeII ACGT 1 cut(s) 162
MaeIII GTNAC 2 cut(s) 36, 865
MalI GATC 9 cut(s) 75, 141, 146, 228, 235, 249, 254, 262, 420
MbiI CCGCTC 1 cut(s) 34
MboI GATC 9 cut(s) 73, 139, 144, 226, 233, 247, 252, 260, 418
MboII GAAGA 3 cut(s) 376, 706, 985
MflI RGATCY 2 cut(s) 73, 144
MhlI GDGCHC 3 cut(s) 324, 563, 859
MluCI AATT 5 cut(s) 604, 625, 661, 925, 946
MmeI TCCRAC 2 cut(s) 261, 387
Mph1103I ATGCAT 1 cut(s) 349
MroNI GCCGGC 1 cut(s) 781
MseI TTAA 1 cut(s) 995
MslI CAYNNNNRTG 1 cut(s) 797
MspA1I CMGCKG 1 cut(s) 988
MspI CCGG 8 cut(s) 268, 293, 368, 380, 464, 782, 890, 896
MspR9I CCNGG 7 cut(s) 170, 221, 293, 368, 686, 853, 890
Mva1269I GAATGC 1 cut(s) 487
MvaI CCWGG 4 cut(s) 170, 221, 686, 853
MvnI CGCG 5 cut(s) 88, 90, 186, 779, 988
NaeI GCCGGC 1 cut(s) 783
NciI CCSGG 3 cut(s) 293, 368, 890
NcoI CCATGG 1 cut(s) 720
NdeII GATC 9 cut(s) 73, 139, 144, 226, 233, 247, 252, 260, 418
NgoMIV GCCGGC 1 cut(s) 781
NlaIII CATG 2 cut(s) 351, 724
NlaIV GGNNCC 4 cut(s) 136, 657, 858, 894
NmeAIII GCCGAG 3 cut(s) 55, 76, 343
NmuCI GTSAC 1 cut(s) 865
NsiI ATGCAT 1 cut(s) 349
PcsI WCGNNNNNNNCGW 3 cut(s) 48, 315, 539
PctI GAATGC 1 cut(s) 487
PdiI GCCGGC 1 cut(s) 783
PfeI GAWTC 1 cut(s) 45
Psp6I CCWGG 4 cut(s) 168, 219, 684, 851
PspFI CCCAGC 2 cut(s) 397, 705
PspGI CCWGG 4 cut(s) 168, 219, 684, 851
PspN4I GGNNCC 4 cut(s) 136, 657, 858, 894
PspPI GGNCC 3 cut(s) 4, 400, 655
PsuI RGATCY 2 cut(s) 73, 144
RsaI GTAC 3 cut(s) 209, 266, 587
RsaNI GTAC 3 cut(s) 208, 265, 586
RseI CAYNNNNRTG 1 cut(s) 797
SacII CCGCGG 1 cut(s) 989
SalI GTCGAC 1 cut(s) 158
SaqAI TTAA 1 cut(s) 995
Sau3AI GATC 9 cut(s) 73, 139, 144, 226, 233, 247, 252, 260, 418
Sau96I GGNCC 3 cut(s) 4, 400, 655
ScrFI CCNGG 7 cut(s) 170, 221, 293, 368, 686, 853, 890
SduI GDGCHC 3 cut(s) 324, 563, 859
SfaNI GCATC 3 cut(s) 334, 679, 789
SfcI CTRYAG 1 cut(s) 406
Sfr303I CCGCGG 1 cut(s) 989
SgrBI CCGCGG 1 cut(s) 989
SgrDI CGTCGACG 1 cut(s) 158
SinI GGWCC 2 cut(s) 4, 655
SmiMI CAYNNNNRTG 1 cut(s) 797
Sse9I AATT 5 cut(s) 604, 625, 661, 925, 946
SspMI CTAG 1 cut(s) 591
StyD4I CCNGG 7 cut(s) 168, 219, 291, 366, 684, 851, 888
StyI CCWWGG 2 cut(s) 590, 720
TaaI ACNGT 4 cut(s) 569, 579, 701, 871
TaiI ACGT 1 cut(s) 165
TaqI TCGA 7 cut(s) 159, 387, 417, 487, 533, 542, 944
TasI AATT 5 cut(s) 604, 625, 661, 925, 946
TfiI GAWTC 1 cut(s) 45
Tru1I TTAA 1 cut(s) 995
Tru9I TTAA 1 cut(s) 995
TseFI GTSAC 1 cut(s) 865
TseI GCWGC 8 cut(s) 81, 434, 437, 440, 511, 514, 738, 770
Tsp45I GTSAC 1 cut(s) 865
VpaK11BI GGWCC 2 cut(s) 4, 655
XapI RAATTY 3 cut(s) 661, 925, 946
XcmI CCANNNNNNNNNTGG 1 cut(s) 220
XmaJI CCTAGG 1 cut(s) 590
XmiI GTMKAC 1 cut(s) 159
XspI CTAG 1 cut(s) 591
ZraI GACGTC 1 cut(s) 163
Zsp2I ATGCAT 1 cut(s) 349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.