Rh7AG454800

DnaJ domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
62472824 .. 62474090
1267 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG454800.1

Sequence Viewer

Length: 1203 bp
ATGACCAAAACACCCACCAGCAAAAGAACGAGCGTGAAAACACTCCCTGCCATTTCCAGCAAAACCAAGCCCAGATTTACAATTCCATTTCTATTTCTATTTCTATTTCTATTTCTATTTGATCTTTTCCACACAAACCAAAAAGCAAACTCCAAAACAGCGATCGCCGTCGTCGGCGATCCCAATCGGAAAAGTATGGACCACAATCCGAACAGAGCCGAAGCCGAGCGGTTACTCGGAATCGCCGAGAAGCTCCTACAGAACCGAGATCTGAGCAGCTCGCGCGACTTCGCCATTCTGGCGCAAGAAACAGAGCCGCTATTGGACGGCTCCGATCAGATCTTAGCCATCGTCGACGTCCTCCTAGCCGCCGATAAGCGCGTAAACAACCACCACGACTGGTACTCCATTCTCCAGGTGGATCGCCGATCCGACGACCACGATCTGATCAAGAGATCGTACCGACGGCTGGCGTTGCTCCTCCACCCGGACAAGAACAAATACGCCTTCGCCGAGCACGCCTTCAAGCTCGTCGCCGATGCATGGACCGTTCTCTCCGACCCGGCCAAGAAGCCGGTCTTCGACACCGAGCTGGGCCTCTACAGCCCAGTCGATCTCACCGCCGCCGCTGCAGCAGCCTCCAATCCGAACAAGCTTCCGGTGCGGCGGGGGCAGAATGCTCGAAACGACGGCGTTTCGGACGAGCAGCAGCAAAATCAACAGAGGTCGAGATTATCGAGCTTCTGGACGGCGTGTCCTTACTGTTATATACTGTATGAGTACCCTAGGGTTTATGAGAATTGCTGTTTGAGGTGTCAGAATTGTAAGAGAGGGTTTGAGGCCGTTTTGGTCCCGAATTTGCCGCCATTGGTGCAAGGCCAGGATGCCTATTACTGTTGCTGGGGCTTCTTCCCCATGGGGTTTGTTGGTGGCAGTTCAGCCAATGGAGGAAAGGGAAAGGCGGCTGCCACCGCGCCGGCCTTCCCCACTTGGATGCCACCGATTTTCACAACGCCACCGCCCCCGCCACAGAATAAAACCCCTGAGACTTCCAGGGCACCCCCTGTGAATGTGCCGCCGCCACCTGCCCCGGTGCCCGCGGCGGCAACGGGTGATGTAATGTTGAATTTTTCGGGTGGGAACTCGAATTCAGGGACAGGGACTAATCCAAAGAAGAGGGGACGGCCACGGAAGTTAACTTAG

Protein Analysis

400

Amino Acids

44.21

Weight (kDa)

9.41

Isoelectric Point (pI)

47.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 133 - 195 8.5e-18 DnaJ domain
Zn_ribbon_20 PF23551 248 - 282 4.5e-08 Zinc beta-ribbon domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011428)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1093
AatII GACGTC 1 cut(s) 360
Acc36I ACCTGC 1 cut(s) 1093
AccB1I GGYRCC 2 cut(s) 1057, 1093
AccBSI CCGCTC 1 cut(s) 229
AccI GTMKAC 1 cut(s) 354
AccII CGCG 5 cut(s) 283, 285, 381, 974, 1100
AclWI GGATC 3 cut(s) 173, 423, 429
AcoI YGGCCR 2 cut(s) 564, 1184
AcsI RAATTY 3 cut(s) 856, 1126, 1147
AcyI GRCGYC 1 cut(s) 357
AfaI GTAC 3 cut(s) 404, 461, 782
AfiI CCNNNNNNNGG 3 cut(s) 469, 487, 543
AgsI TTSAA 2 cut(s) 526, 1126
AhdI GACNNNNNGTC 1 cut(s) 753
AjnI CCWGG 3 cut(s) 414, 879, 1052
AluBI AGCT 6 cut(s) 253, 279, 529, 592, 655, 741
AluI AGCT 6 cut(s) 253, 279, 529, 592, 655, 741
Alw21I GWGCWC 1 cut(s) 519
Alw26I GTCTC 1 cut(s) 1040
AlwI GGATC 3 cut(s) 173, 423, 429
AoxI GGCC 6 cut(s) 564, 595, 840, 877, 978, 1184
ApeKI GCWGC 7 cut(s) 276, 629, 632, 635, 706, 709, 965
ApoI RAATTY 3 cut(s) 856, 1126, 1147
AsiSI GCGATCGC 1 cut(s) 165
AspA2I CCTAGG 1 cut(s) 785
AspLEI GCGC 4 cut(s) 285, 304, 381, 976
AspS9I GGNCC 4 cut(s) 199, 546, 595, 850
AsuC2I CCSGG 3 cut(s) 488, 563, 1091
AsuHPI GGTGA 2 cut(s) 610, 1124
AvaII GGWCC 3 cut(s) 199, 546, 850
AvrII CCTAGG 1 cut(s) 785
BaeGI GKGCMC 2 cut(s) 1060, 1098
BanI GGYRCC 2 cut(s) 1057, 1093
BbsI GAAGAC 1 cut(s) 571
Bbv12I GWGCWC 1 cut(s) 519
BbvI GCAGC 7 cut(s) 288, 616, 644, 647, 718, 721, 952
BccI CCATC 1 cut(s) 356
BceAI ACGGC 7 cut(s) 152, 343, 482, 706, 765, 827, 1199
BcgI CGANNNNNNTGC 2 cut(s) 662, 696
BciT130I CCWGG 3 cut(s) 416, 881, 1054
BclI TGATCA 1 cut(s) 447
BcnI CCSGG 3 cut(s) 488, 563, 1091
BcoDI GTCTC 1 cut(s) 1040
BfaI CTAG 2 cut(s) 365, 786
BfmI CTRYAG 3 cut(s) 257, 601, 630
BfuAI ACCTGC 1 cut(s) 1093
BglI GCCNNNNNGGC 1 cut(s) 299
BglII AGATCT 2 cut(s) 268, 339
BlnI CCTAGG 1 cut(s) 785
Bme1390I CCNGG 6 cut(s) 416, 488, 563, 881, 1054, 1091
Bme18I GGWCC 3 cut(s) 199, 546, 850
BmeRI GACNNNNNGTC 1 cut(s) 753
BmgT120I GGNCC 4 cut(s) 199, 546, 595, 850
BmiI GGNNCC 4 cut(s) 331, 852, 1059, 1095
BmrFI CCNGG 6 cut(s) 416, 488, 563, 881, 1054, 1091
BmrI ACTGGG 1 cut(s) 602
BmsI GCATC 3 cut(s) 529, 874, 984
BmuI ACTGGG 1 cut(s) 602
BpiI GAAGAC 1 cut(s) 571
BpmI CTGGAG 1 cut(s) 398
BpuMI CCSGG 3 cut(s) 488, 563, 1091
BsaBI GATNNNNATC 1 cut(s) 183
BsaHI GRCGYC 1 cut(s) 357
BsaJI CCNNGG 6 cut(s) 785, 915, 1053, 1089, 1098, 1187
BsaWI WCCGGW 1 cut(s) 658
BsaXI ACNNNNNCTCC 2 cut(s) 389, 419
Bsc4I CCNNNNNNNGG 3 cut(s) 469, 487, 543
Bse118I RCCGGY 2 cut(s) 574, 976
Bse1I ACTGG 2 cut(s) 404, 608
Bse8I GATNNNNATC 1 cut(s) 183
BseBI CCWGG 3 cut(s) 416, 881, 1054
BseDI CCNNGG 6 cut(s) 785, 915, 1053, 1089, 1098, 1187
BseGI GGATG 2 cut(s) 889, 999
BseJI GATNNNNATC 1 cut(s) 183
BseLI CCNNNNNNNGG 3 cut(s) 469, 487, 543
BseMII CTCAG 2 cut(s) 263, 1035
BseNI ACTGG 2 cut(s) 404, 608
BseRI GAGGAG 1 cut(s) 470
BseSI GKGCMC 2 cut(s) 1060, 1098
BseXI GCAGC 7 cut(s) 288, 616, 644, 647, 718, 721, 952
BseYI CCCAGC 2 cut(s) 592, 900
Bsh1236I CGCG 5 cut(s) 283, 285, 381, 974, 1100
Bsh1285I CGRYCG 1 cut(s) 165
BshFI GGCC 6 cut(s) 566, 597, 842, 879, 980, 1186
BshNI GGYRCC 2 cut(s) 1057, 1093
BsiEI CGRYCG 1 cut(s) 165
BsiHKAI GWGCWC 1 cut(s) 519
BsiSI CCGG 6 cut(s) 488, 563, 575, 659, 977, 1091
BslFI GGGAC 4 cut(s) 836, 1168, 1174, 1194
BslI CCNNNNNNNGG 3 cut(s) 469, 487, 543
BsmAI GTCTC 1 cut(s) 1040
BsmFI GGGAC 4 cut(s) 836, 1168, 1174, 1194
BsmI GAATGC 1 cut(s) 682
BsnI GGCC 6 cut(s) 566, 597, 842, 879, 980, 1186
Bsp1286I GDGCHC 3 cut(s) 519, 1060, 1098
Bsp19I CCATGG 1 cut(s) 915
BspANI GGCC 6 cut(s) 566, 597, 842, 879, 980, 1186
BspCNI CTCAG 2 cut(s) 264, 1036
BspFNI CGCG 5 cut(s) 283, 285, 381, 974, 1100
BspLI GGNNCC 4 cut(s) 331, 852, 1059, 1095
BspMAI CTGCAG 1 cut(s) 634
BspMI ACCTGC 1 cut(s) 1093
BspPI GGATC 3 cut(s) 173, 423, 429
BspT107I GGYRCC 2 cut(s) 1057, 1093
BsrBI CCGCTC 1 cut(s) 229
BsrFI RCCGGY 2 cut(s) 574, 976
BsrI ACTGG 2 cut(s) 404, 608
BssAI RCCGGY 2 cut(s) 574, 976
BssECI CCNNGG 6 cut(s) 785, 915, 1053, 1089, 1098, 1187
BssNI GRCGYC 1 cut(s) 357
BssT1I CCWWGG 2 cut(s) 785, 915
Bst2UI CCWGG 3 cut(s) 416, 881, 1054
Bst4CI ACNGT 4 cut(s) 550, 764, 774, 896
Bst6I CTCTTC 1 cut(s) 1169
BstACI GRCGYC 1 cut(s) 357
BstC8I GCNNGC 5 cut(s) 281, 471, 519, 978, 1098
BstDEI CTNAG 4 cut(s) 272, 343, 1044, 1200
BstDSI CCRYGG 3 cut(s) 915, 1098, 1187
BstF5I GGATG 2 cut(s) 889, 999
BstFNI CGCG 5 cut(s) 283, 285, 381, 974, 1100
BstHHI GCGC 4 cut(s) 285, 304, 381, 976
BstMAI GTCTC 1 cut(s) 1040
BstMCI CGRYCG 1 cut(s) 165
BstNI CCWGG 3 cut(s) 416, 881, 1054
BstSCI CCNGG 6 cut(s) 414, 486, 561, 879, 1052, 1089
BstSFI CTRYAG 3 cut(s) 257, 601, 630
BstSLI GKGCMC 2 cut(s) 1060, 1098
BstUI CGCG 5 cut(s) 283, 285, 381, 974, 1100
BstV1I GCAGC 7 cut(s) 288, 616, 644, 647, 718, 721, 952
BstV2I GAAGAC 1 cut(s) 571
BstX2I RGATCY 2 cut(s) 268, 339
BstYI RGATCY 2 cut(s) 268, 339
BsuRI GGCC 6 cut(s) 566, 597, 842, 879, 980, 1186
BtgI CCRYGG 3 cut(s) 915, 1098, 1187
BtsCI GGATG 2 cut(s) 889, 999
BveI ACCTGC 1 cut(s) 1093
Cac8I GCNNGC 5 cut(s) 281, 471, 519, 978, 1098
CfoI GCGC 4 cut(s) 285, 304, 381, 976
Cfr10I RCCGGY 2 cut(s) 574, 976
Cfr13I GGNCC 4 cut(s) 199, 546, 595, 850
Cfr42I CCGCGG 1 cut(s) 1101
Csp6I GTAC 3 cut(s) 403, 460, 781
CviAII CATG 2 cut(s) 543, 916
CviQI GTAC 3 cut(s) 403, 460, 781
DdeI CTNAG 4 cut(s) 272, 343, 1044, 1200
DriI GACNNNNNGTC 1 cut(s) 753
EaeI YGGCCR 2 cut(s) 564, 1184
Eam1104I CTCTTC 1 cut(s) 1169
Eam1105I GACNNNNNGTC 1 cut(s) 753
EarI CTCTTC 1 cut(s) 1169
Eco130I CCWWGG 2 cut(s) 785, 915
Eco47I GGWCC 3 cut(s) 199, 546, 850
EcoRI GAATTC 1 cut(s) 1147
EcoRII CCWGG 3 cut(s) 414, 879, 1052
EcoT14I CCWWGG 2 cut(s) 785, 915
EcoT22I ATGCAT 1 cut(s) 544
ErhI CCWWGG 2 cut(s) 785, 915
FaeI CATG 2 cut(s) 546, 919
FaiI YATR 7 cut(s) 197, 544, 768, 770, 777, 795, 917
FalI AAGNNNNNCTT 2 cut(s) 563, 595
FaqI GGGAC 4 cut(s) 836, 1168, 1174, 1194
FatI CATG 2 cut(s) 542, 915
FauI CCCGC 3 cut(s) 660, 1032, 1105
FbaI TGATCA 1 cut(s) 447
FblI GTMKAC 1 cut(s) 354
FokI GGATG 2 cut(s) 896, 1006
FspBI CTAG 2 cut(s) 365, 786
GlaI GCGC 4 cut(s) 284, 303, 380, 975
GsaI CCCAGC 2 cut(s) 596, 904
GsuI CTGGAG 1 cut(s) 398
HaeIII GGCC 6 cut(s) 566, 597, 842, 879, 980, 1186
HapII CCGG 6 cut(s) 488, 563, 575, 659, 977, 1091
HhaI GCGC 4 cut(s) 285, 304, 381, 976
Hin1I GRCGYC 1 cut(s) 357
Hin1II CATG 2 cut(s) 546, 919
Hin6I GCGC 4 cut(s) 283, 302, 379, 974
HinP1I GCGC 4 cut(s) 283, 302, 379, 974
HincII GTYRAC 2 cut(s) 355, 1197
HindII GTYRAC 2 cut(s) 355, 1197
HindIII AAGCTT 1 cut(s) 653
HinfI GANTC 1 cut(s) 240
HpaI GTTAAC 1 cut(s) 1197
HpaII CCGG 6 cut(s) 488, 563, 575, 659, 977, 1091
HphI GGTGA 2 cut(s) 610, 1124
Hpy166II GTNNAC 3 cut(s) 355, 385, 1197
Hpy188III TCNNGA 4 cut(s) 451, 729, 745, 853
Hpy8I GTNNAC 3 cut(s) 355, 385, 1197
Hpy99I CGWCG 8 cut(s) 173, 176, 356, 359, 437, 468, 536, 692
HpyAV CCTTC 3 cut(s) 517, 532, 991
HpyCH4III ACNGT 4 cut(s) 550, 764, 774, 896
HpyCH4IV ACGT 1 cut(s) 357
HpyCH4V TGCA 3 cut(s) 542, 632, 874
HpyF3I CTNAG 4 cut(s) 272, 343, 1044, 1200
HpySE526I ACGT 1 cut(s) 357
Hsp92I GRCGYC 1 cut(s) 357
Hsp92II CATG 2 cut(s) 546, 919
HspAI GCGC 4 cut(s) 283, 302, 379, 974
KroI GCCGGC 1 cut(s) 976
KroNI GCCGGC 1 cut(s) 978
Ksp22I TGATCA 1 cut(s) 447
KspAI GTTAAC 1 cut(s) 1197
KspI CCGCGG 1 cut(s) 1101
LmnI GCTCC 3 cut(s) 258, 335, 483
Lsp1109I GCAGC 7 cut(s) 288, 616, 644, 647, 718, 721, 952
LweI GCATC 3 cut(s) 529, 874, 984
MaeI CTAG 2 cut(s) 365, 786
MaeII ACGT 1 cut(s) 357
MaeIII GTNAC 1 cut(s) 231
MbiI CCGCTC 1 cut(s) 229
MboII GAAGA 3 cut(s) 571, 901, 1186
MflI RGATCY 2 cut(s) 268, 339
MhlI GDGCHC 3 cut(s) 519, 1060, 1098
MluCI AATT 6 cut(s) 81, 799, 820, 856, 1126, 1147
MmeI TCCRAC 2 cut(s) 456, 582
Mph1103I ATGCAT 1 cut(s) 544
MroNI GCCGGC 1 cut(s) 976
MseI TTAA 1 cut(s) 1196
MslI CAYNNNNRTG 1 cut(s) 992
MspA1I CMGCKG 2 cut(s) 629, 1100
MspI CCGG 6 cut(s) 488, 563, 575, 659, 977, 1091
MspR9I CCNGG 6 cut(s) 416, 488, 563, 881, 1054, 1091
Mva1269I GAATGC 1 cut(s) 682
MvaI CCWGG 3 cut(s) 416, 881, 1054
MvnI CGCG 5 cut(s) 283, 285, 381, 974, 1100
NaeI GCCGGC 1 cut(s) 978
NciI CCSGG 3 cut(s) 488, 563, 1091
NcoI CCATGG 1 cut(s) 915
NgoMIV GCCGGC 1 cut(s) 976
NlaIII CATG 2 cut(s) 546, 919
NlaIV GGNNCC 4 cut(s) 331, 852, 1059, 1095
NmeAIII GCCGAG 3 cut(s) 250, 271, 538
NsiI ATGCAT 1 cut(s) 544
PaqCI CACCTGC 1 cut(s) 1093
PcsI WCGNNNNNNNCGW 3 cut(s) 243, 510, 734
PctI GAATGC 1 cut(s) 682
PdiI GCCGGC 1 cut(s) 978
PfeI GAWTC 1 cut(s) 240
Ple19I CGATCG 1 cut(s) 165
Psp6I CCWGG 3 cut(s) 414, 879, 1052
PspFI CCCAGC 2 cut(s) 592, 900
PspGI CCWGG 3 cut(s) 414, 879, 1052
PspN4I GGNNCC 4 cut(s) 331, 852, 1059, 1095
PspPI GGNCC 4 cut(s) 199, 546, 595, 850
PstI CTGCAG 1 cut(s) 634
PsuI RGATCY 2 cut(s) 268, 339
PvuI CGATCG 1 cut(s) 165
RgaI GCGATCGC 1 cut(s) 165
RsaI GTAC 3 cut(s) 404, 461, 782
RsaNI GTAC 3 cut(s) 403, 460, 781
RseI CAYNNNNRTG 1 cut(s) 992
SacII CCGCGG 1 cut(s) 1101
SalI GTCGAC 1 cut(s) 353
SaqAI TTAA 1 cut(s) 1196
Sau96I GGNCC 4 cut(s) 199, 546, 595, 850
ScrFI CCNGG 6 cut(s) 416, 488, 563, 881, 1054, 1091
SduI GDGCHC 3 cut(s) 519, 1060, 1098
SfaAI GCGATCGC 1 cut(s) 165
SfaNI GCATC 3 cut(s) 529, 874, 984
SfcI CTRYAG 3 cut(s) 257, 601, 630
Sfr303I CCGCGG 1 cut(s) 1101
SgfI GCGATCGC 1 cut(s) 165
SgrBI CCGCGG 1 cut(s) 1101
SgrDI CGTCGACG 1 cut(s) 353
SinI GGWCC 3 cut(s) 199, 546, 850
SmiMI CAYNNNNRTG 1 cut(s) 992
Sse9I AATT 6 cut(s) 81, 799, 820, 856, 1126, 1147
SspMI CTAG 2 cut(s) 365, 786
StyD4I CCNGG 6 cut(s) 414, 486, 561, 879, 1052, 1089
StyI CCWWGG 2 cut(s) 785, 915
TaaI ACNGT 4 cut(s) 550, 764, 774, 896
TaiI ACGT 1 cut(s) 360
TaqI TCGA 7 cut(s) 354, 582, 612, 682, 728, 737, 1145
TasI AATT 6 cut(s) 81, 799, 820, 856, 1126, 1147
TfiI GAWTC 1 cut(s) 240
Tru1I TTAA 1 cut(s) 1196
Tru9I TTAA 1 cut(s) 1196
TseI GCWGC 7 cut(s) 276, 629, 632, 635, 706, 709, 965
VpaK11BI GGWCC 3 cut(s) 199, 546, 850
XapI RAATTY 3 cut(s) 856, 1126, 1147
XcmI CCANNNNNNNNNTGG 1 cut(s) 415
XmaJI CCTAGG 1 cut(s) 785
XmiI GTMKAC 1 cut(s) 354
XspI CTAG 2 cut(s) 365, 786
ZraI GACGTC 1 cut(s) 358
Zsp2I ATGCAT 1 cut(s) 544
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.