Rh7BG426000

DnaJ domain

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
48613764 .. 48616285
2522 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG426000.1

Sequence Viewer

Length: 1212 bp
ATGACCAAAACACCCACCAGCAAAAGAACGAGCATGAAAACATTCCCTGCCATTTCCAGCAAAACCAAGCCCAGATATGTAAACCCCCCCACATTCCATTTCTATTTCTATTTTGATCTTTTCCGCACAAACCAAAAAGCAAACTCCAAAACAGCGATCGCCGTCGTCGGCGATCCCAATCGGAGAAGTATGGACCACAATCCGAACAGAGCCGAAGCCGAGCGGTTACTCGGAATAGCCGAGAAGCTCCTACAGAACCGAGATCTGAGCAGCTCGCGCGACTTCGCCATTCTAGCGCAAGAAACAGAGCCGCTATTGGACGGCTCCGATCAGATCTTAGCCGTCGTCGACGTCCTCCTAGCCGCCGATAAGCGCGTAAACAACCACCACGACTGGTACTCCATTCTCCAGGTGGATCGCCGATCCGACGACCACGATCTGATCAAGAGATCTTACCGACGGCTGGCGTTGCTCCTCCACCCGGACAAGAACAAATACGCCTTCGCCGAGCACGCCTTCAAGCTCGTCGCCGATGCATGGGCCGTTCTCTCCGACCCGGCCCAGAAGCCGGTCTTCGACACCGAGCTGGGCCTCTACAGCCCAGTCGATCTCACCGCCGCCGCTGCAGCAGCAGCAGCCTCCAATCCGAACAAGCTTCCGGTGCGGCGGGGGCAGAATGCTCGAAACGACGGCGTTTCGGACGAGCAGCAGCAGCAGCAGCAGCAAAATCAACAGAGGTCGAGATTATCGAGCTTCTGGACGGCGTGTCCTTACTGTTATATACTGTATGAGTACCCTAGGGTTTATGAGAATTGCTGTTTGAGGTGTCAGAATTGTAAGAGAGGGTTTGAAGCTGTTTTGGTCCCGAATTTGCCGCCAATGGTGCAAGGCCAGGATGCCTATTACTGTTGCTGGGGCTTCTTCCCCATGGGGTTTGTTGGTGGCAGCTCAGCAAATGGAGGAAAGGGCAAGGCGGCTGCCGCCACGCCGGCCTTCCCCACTTGGATGCCACCAATTTTCACAACGCCGCCACCGCAGAATAAAGCCCCTGAGACTTCCAGGGCACCACCCCCTGTGACTGTGCCGCCGCCTCCTGCCCCGGTGCCGGTGGCGGCAATGGGTGATGGAATGTTGAATTTTTCAGGTGGGAACTCGAATTCGGGGACAGGGACTAATCCAAAGAAGAGGGGACGGCCGCGGAAGTTTACTTAG

Protein Analysis

403

Amino Acids

44.68

Weight (kDa)

9.4

Isoelectric Point (pI)

53.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 131 - 193 2.3e-17 DnaJ domain
Zn_ribbon_20 PF23551 252 - 286 4.5e-08 Zinc beta-ribbon domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011428)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 354
AccB1I GGYRCC 2 cut(s) 1063, 1102
AccBSI CCGCTC 1 cut(s) 223
AccI GTMKAC 1 cut(s) 348
AccII CGCG 4 cut(s) 277, 279, 375, 1198
AclWI GGATC 3 cut(s) 167, 417, 423
AcoI YGGCCR 1 cut(s) 1193
AcsI RAATTY 3 cut(s) 868, 1135, 1156
AcyI GRCGYC 1 cut(s) 351
AfaI GTAC 2 cut(s) 398, 794
AfiI CCNNNNNNNGG 5 cut(s) 463, 481, 537, 568, 1105
AgsI TTSAA 3 cut(s) 520, 851, 1135
AhdI GACNNNNNGTC 1 cut(s) 765
AjnI CCWGG 3 cut(s) 408, 891, 1058
AluBI AGCT 8 cut(s) 247, 273, 523, 586, 655, 753, 854, 948
AluI AGCT 8 cut(s) 247, 273, 523, 586, 655, 753, 854, 948
Alw21I GWGCWC 1 cut(s) 513
Alw26I GTCTC 1 cut(s) 1046
AlwI GGATC 3 cut(s) 167, 417, 423
AoxI GGCC 6 cut(s) 540, 558, 589, 889, 990, 1193
ApoI RAATTY 3 cut(s) 868, 1135, 1156
AsiSI GCGATCGC 1 cut(s) 159
Asp700I GAANNNNTTC 1 cut(s) 41
AspA2I CCTAGG 1 cut(s) 797
AspLEI GCGC 3 cut(s) 279, 298, 375
AspS9I GGNCC 5 cut(s) 193, 540, 559, 589, 862
AsuC2I CCSGG 3 cut(s) 482, 557, 1100
AsuHPI GGTGA 2 cut(s) 604, 1133
AvaII GGWCC 2 cut(s) 193, 862
AvrII CCTAGG 1 cut(s) 797
BaeGI GKGCMC 1 cut(s) 1066
BanI GGYRCC 2 cut(s) 1063, 1102
BbsI GAAGAC 1 cut(s) 565
Bbv12I GWGCWC 1 cut(s) 513
BccI CCATC 1 cut(s) 1118
BceAI ACGGC 8 cut(s) 146, 326, 337, 476, 527, 706, 777, 1208
BcgI CGANNNNNNTGC 2 cut(s) 662, 696
BciT130I CCWGG 3 cut(s) 410, 893, 1060
BclI TGATCA 1 cut(s) 441
BcnI CCSGG 3 cut(s) 482, 557, 1100
BcoDI GTCTC 1 cut(s) 1046
BfaI CTAG 3 cut(s) 293, 359, 798
BfmI CTRYAG 3 cut(s) 251, 595, 624
BglI GCCNNNNNGGC 1 cut(s) 989
BglII AGATCT 3 cut(s) 262, 333, 449
BlnI CCTAGG 1 cut(s) 797
BlpI GCTNAGC 1 cut(s) 949
Bme1390I CCNGG 6 cut(s) 410, 482, 557, 893, 1060, 1100
Bme18I GGWCC 2 cut(s) 193, 862
BmeRI GACNNNNNGTC 1 cut(s) 765
BmgT120I GGNCC 5 cut(s) 193, 540, 559, 589, 862
BmiI GGNNCC 4 cut(s) 325, 864, 1065, 1104
BmrFI CCNGG 6 cut(s) 410, 482, 557, 893, 1060, 1100
BmrI ACTGGG 1 cut(s) 596
BmsI GCATC 3 cut(s) 523, 886, 996
BmuI ACTGGG 1 cut(s) 596
BpiI GAAGAC 1 cut(s) 565
BpmI CTGGAG 1 cut(s) 392
Bpu1102I GCTNAGC 1 cut(s) 949
BpuMI CCSGG 3 cut(s) 482, 557, 1100
BsaBI GATNNNNATC 1 cut(s) 177
BsaHI GRCGYC 1 cut(s) 351
BsaJI CCNNGG 5 cut(s) 797, 927, 1059, 1098, 1196
BsaWI WCCGGW 1 cut(s) 658
BsaXI ACNNNNNCTCC 2 cut(s) 383, 413
Bsc4I CCNNNNNNNGG 5 cut(s) 463, 481, 537, 568, 1105
Bse118I RCCGGY 3 cut(s) 568, 988, 1105
Bse1I ACTGG 2 cut(s) 398, 602
Bse3DI GCAATG 1 cut(s) 1122
Bse8I GATNNNNATC 1 cut(s) 177
BseBI CCWGG 3 cut(s) 410, 893, 1060
BseDI CCNNGG 5 cut(s) 797, 927, 1059, 1098, 1196
BseGI GGATG 2 cut(s) 901, 1011
BseJI GATNNNNATC 1 cut(s) 177
BseLI CCNNNNNNNGG 5 cut(s) 463, 481, 537, 568, 1105
BseMI GCAATG 1 cut(s) 1122
BseMII CTCAG 3 cut(s) 257, 963, 1041
BseNI ACTGG 2 cut(s) 398, 602
BseRI GAGGAG 1 cut(s) 464
BseSI GKGCMC 1 cut(s) 1066
BseX3I CGGCCG 1 cut(s) 1193
BseYI CCCAGC 2 cut(s) 586, 912
Bsh1236I CGCG 4 cut(s) 277, 279, 375, 1198
Bsh1285I CGRYCG 2 cut(s) 159, 1196
BshFI GGCC 6 cut(s) 542, 560, 591, 891, 992, 1195
BshNI GGYRCC 2 cut(s) 1063, 1102
BsiEI CGRYCG 2 cut(s) 159, 1196
BsiHKAI GWGCWC 1 cut(s) 513
BsiSI CCGG 7 cut(s) 482, 557, 569, 659, 989, 1100, 1106
BslFI GGGAC 4 cut(s) 848, 1177, 1183, 1203
BslI CCNNNNNNNGG 5 cut(s) 463, 481, 537, 568, 1105
BsmAI GTCTC 1 cut(s) 1046
BsmFI GGGAC 4 cut(s) 848, 1177, 1183, 1203
BsmI GAATGC 1 cut(s) 682
BsnI GGCC 6 cut(s) 542, 560, 591, 891, 992, 1195
Bsp1286I GDGCHC 2 cut(s) 513, 1066
Bsp1720I GCTNAGC 1 cut(s) 949
Bsp19I CCATGG 1 cut(s) 927
BspANI GGCC 6 cut(s) 542, 560, 591, 891, 992, 1195
BspCNI CTCAG 3 cut(s) 258, 962, 1042
BspFNI CGCG 4 cut(s) 277, 279, 375, 1198
BspLI GGNNCC 4 cut(s) 325, 864, 1065, 1104
BspMAI CTGCAG 1 cut(s) 628
BspPI GGATC 3 cut(s) 167, 417, 423
BspT107I GGYRCC 2 cut(s) 1063, 1102
BsrBI CCGCTC 1 cut(s) 223
BsrDI GCAATG 1 cut(s) 1122
BsrFI RCCGGY 3 cut(s) 568, 988, 1105
BsrI ACTGG 2 cut(s) 398, 602
BssAI RCCGGY 3 cut(s) 568, 988, 1105
BssECI CCNNGG 5 cut(s) 797, 927, 1059, 1098, 1196
BssNI GRCGYC 1 cut(s) 351
BssT1I CCWWGG 2 cut(s) 797, 927
Bst2UI CCWGG 3 cut(s) 410, 893, 1060
Bst4CI ACNGT 4 cut(s) 776, 786, 908, 1081
Bst6I CTCTTC 1 cut(s) 1178
BstACI GRCGYC 1 cut(s) 351
BstC8I GCNNGC 4 cut(s) 275, 465, 513, 990
BstDEI CTNAG 5 cut(s) 266, 337, 949, 1050, 1209
BstDSI CCRYGG 2 cut(s) 927, 1196
BstF5I GGATG 2 cut(s) 901, 1011
BstFNI CGCG 4 cut(s) 277, 279, 375, 1198
BstHHI GCGC 3 cut(s) 279, 298, 375
BstMAI GTCTC 1 cut(s) 1046
BstMCI CGRYCG 2 cut(s) 159, 1196
BstNI CCWGG 3 cut(s) 410, 893, 1060
BstSCI CCNGG 6 cut(s) 408, 480, 555, 891, 1058, 1098
BstSFI CTRYAG 3 cut(s) 251, 595, 624
BstSLI GKGCMC 1 cut(s) 1066
BstUI CGCG 4 cut(s) 277, 279, 375, 1198
BstV2I GAAGAC 1 cut(s) 565
BstX2I RGATCY 3 cut(s) 262, 333, 449
BstYI RGATCY 3 cut(s) 262, 333, 449
BstZI CGGCCG 1 cut(s) 1193
BsuRI GGCC 6 cut(s) 542, 560, 591, 891, 992, 1195
BtgI CCRYGG 2 cut(s) 927, 1196
BtsCI GGATG 2 cut(s) 901, 1011
Cac8I GCNNGC 4 cut(s) 275, 465, 513, 990
CfoI GCGC 3 cut(s) 279, 298, 375
Cfr10I RCCGGY 3 cut(s) 568, 988, 1105
Cfr13I GGNCC 5 cut(s) 193, 540, 559, 589, 862
Cfr42I CCGCGG 1 cut(s) 1199
Csp6I GTAC 2 cut(s) 397, 793
CviAII CATG 3 cut(s) 34, 537, 928
CviQI GTAC 2 cut(s) 397, 793
DdeI CTNAG 5 cut(s) 266, 337, 949, 1050, 1209
DriI GACNNNNNGTC 1 cut(s) 765
EaeI YGGCCR 1 cut(s) 1193
EagI CGGCCG 1 cut(s) 1193
Eam1104I CTCTTC 1 cut(s) 1178
Eam1105I GACNNNNNGTC 1 cut(s) 765
EarI CTCTTC 1 cut(s) 1178
EclXI CGGCCG 1 cut(s) 1193
Eco130I CCWWGG 2 cut(s) 797, 927
Eco47I GGWCC 2 cut(s) 193, 862
Eco52I CGGCCG 1 cut(s) 1193
EcoRI GAATTC 1 cut(s) 1156
EcoRII CCWGG 3 cut(s) 408, 891, 1058
EcoT14I CCWWGG 2 cut(s) 797, 927
EcoT22I ATGCAT 1 cut(s) 538
ErhI CCWWGG 2 cut(s) 797, 927
FaeI CATG 3 cut(s) 37, 540, 931
FaiI YATR 9 cut(s) 35, 78, 191, 538, 780, 782, 789, 807, 929
FalI AAGNNNNNCTT 2 cut(s) 557, 589
FaqI GGGAC 4 cut(s) 848, 1177, 1183, 1203
FatI CATG 3 cut(s) 33, 536, 927
FauI CCCGC 1 cut(s) 660
FbaI TGATCA 1 cut(s) 441
FblI GTMKAC 1 cut(s) 348
FokI GGATG 2 cut(s) 908, 1018
FspBI CTAG 3 cut(s) 293, 359, 798
GlaI GCGC 3 cut(s) 278, 297, 374
GsaI CCCAGC 2 cut(s) 590, 916
GsuI CTGGAG 1 cut(s) 392
HaeIII GGCC 6 cut(s) 542, 560, 591, 891, 992, 1195
HapII CCGG 7 cut(s) 482, 557, 569, 659, 989, 1100, 1106
HhaI GCGC 3 cut(s) 279, 298, 375
Hin1I GRCGYC 1 cut(s) 351
Hin1II CATG 3 cut(s) 37, 540, 931
Hin6I GCGC 3 cut(s) 277, 296, 373
HinP1I GCGC 3 cut(s) 277, 296, 373
HincII GTYRAC 1 cut(s) 349
HindII GTYRAC 1 cut(s) 349
HindIII AAGCTT 1 cut(s) 653
HpaII CCGG 7 cut(s) 482, 557, 569, 659, 989, 1100, 1106
HphI GGTGA 2 cut(s) 604, 1133
Hpy166II GTNNAC 4 cut(s) 82, 349, 379, 1206
Hpy188III TCNNGA 4 cut(s) 445, 741, 757, 865
Hpy8I GTNNAC 4 cut(s) 82, 349, 379, 1206
Hpy99I CGWCG 9 cut(s) 167, 170, 347, 350, 353, 431, 462, 530, 692
HpyAV CCTTC 3 cut(s) 511, 526, 1003
HpyCH4III ACNGT 4 cut(s) 776, 786, 908, 1081
HpyCH4IV ACGT 1 cut(s) 351
HpyCH4V TGCA 3 cut(s) 536, 626, 886
HpyF3I CTNAG 5 cut(s) 266, 337, 949, 1050, 1209
HpySE526I ACGT 1 cut(s) 351
Hsp92I GRCGYC 1 cut(s) 351
Hsp92II CATG 3 cut(s) 37, 540, 931
HspAI GCGC 3 cut(s) 277, 296, 373
KroI GCCGGC 1 cut(s) 988
KroNI GCCGGC 1 cut(s) 990
Ksp22I TGATCA 1 cut(s) 441
KspI CCGCGG 1 cut(s) 1199
LmnI GCTCC 3 cut(s) 252, 329, 477
LweI GCATC 3 cut(s) 523, 886, 996
MaeI CTAG 3 cut(s) 293, 359, 798
MaeII ACGT 1 cut(s) 351
MaeIII GTNAC 2 cut(s) 225, 1075
MbiI CCGCTC 1 cut(s) 223
MboII GAAGA 3 cut(s) 565, 913, 1195
MflI RGATCY 3 cut(s) 262, 333, 449
MhlI GDGCHC 2 cut(s) 513, 1066
MluCI AATT 6 cut(s) 811, 832, 868, 1014, 1135, 1156
MmeI TCCRAC 2 cut(s) 450, 576
Mph1103I ATGCAT 1 cut(s) 538
MroNI GCCGGC 1 cut(s) 988
MroXI GAANNNNTTC 1 cut(s) 41
MslI CAYNNNNRTG 1 cut(s) 1004
MspA1I CMGCKG 2 cut(s) 623, 1198
MspI CCGG 7 cut(s) 482, 557, 569, 659, 989, 1100, 1106
MspR9I CCNGG 6 cut(s) 410, 482, 557, 893, 1060, 1100
Mva1269I GAATGC 1 cut(s) 682
MvaI CCWGG 3 cut(s) 410, 893, 1060
MvnI CGCG 4 cut(s) 277, 279, 375, 1198
NaeI GCCGGC 1 cut(s) 990
NciI CCSGG 3 cut(s) 482, 557, 1100
NcoI CCATGG 1 cut(s) 927
NgoMIV GCCGGC 1 cut(s) 988
NlaIII CATG 3 cut(s) 37, 540, 931
NlaIV GGNNCC 4 cut(s) 325, 864, 1065, 1104
NmeAIII GCCGAG 3 cut(s) 244, 265, 532
NmuCI GTSAC 1 cut(s) 1075
NsiI ATGCAT 1 cut(s) 538
PcsI WCGNNNNNNNCGW 3 cut(s) 237, 504, 746
PctI GAATGC 1 cut(s) 682
PdiI GCCGGC 1 cut(s) 990
PdmI GAANNNNTTC 1 cut(s) 41
Ple19I CGATCG 1 cut(s) 159
Psp6I CCWGG 3 cut(s) 408, 891, 1058
PspFI CCCAGC 2 cut(s) 586, 912
PspGI CCWGG 3 cut(s) 408, 891, 1058
PspN4I GGNNCC 4 cut(s) 325, 864, 1065, 1104
PspPI GGNCC 5 cut(s) 193, 540, 559, 589, 862
PstI CTGCAG 1 cut(s) 628
PsuI RGATCY 3 cut(s) 262, 333, 449
PvuI CGATCG 1 cut(s) 159
RgaI GCGATCGC 1 cut(s) 159
RsaI GTAC 2 cut(s) 398, 794
RsaNI GTAC 2 cut(s) 397, 793
RseI CAYNNNNRTG 1 cut(s) 1004
SacII CCGCGG 1 cut(s) 1199
SalI GTCGAC 1 cut(s) 347
Sau96I GGNCC 5 cut(s) 193, 540, 559, 589, 862
ScrFI CCNGG 6 cut(s) 410, 482, 557, 893, 1060, 1100
SduI GDGCHC 2 cut(s) 513, 1066
SfaAI GCGATCGC 1 cut(s) 159
SfaNI GCATC 3 cut(s) 523, 886, 996
SfcI CTRYAG 3 cut(s) 251, 595, 624
Sfr303I CCGCGG 1 cut(s) 1199
SgfI GCGATCGC 1 cut(s) 159
SgrBI CCGCGG 1 cut(s) 1199
SgrDI CGTCGACG 1 cut(s) 347
SinI GGWCC 2 cut(s) 193, 862
SmiMI CAYNNNNRTG 1 cut(s) 1004
Sse9I AATT 6 cut(s) 811, 832, 868, 1014, 1135, 1156
SspMI CTAG 3 cut(s) 293, 359, 798
StyD4I CCNGG 6 cut(s) 408, 480, 555, 891, 1058, 1098
StyI CCWWGG 2 cut(s) 797, 927
TaaI ACNGT 4 cut(s) 776, 786, 908, 1081
TaiI ACGT 1 cut(s) 354
TaqI TCGA 7 cut(s) 348, 576, 606, 682, 740, 749, 1154
TasI AATT 6 cut(s) 811, 832, 868, 1014, 1135, 1156
TseFI GTSAC 1 cut(s) 1075
Tsp45I GTSAC 1 cut(s) 1075
TspDTI ATGAA 1 cut(s) 50
VpaK11BI GGWCC 2 cut(s) 193, 862
XapI RAATTY 3 cut(s) 868, 1135, 1156
XcmI CCANNNNNNNNNTGG 1 cut(s) 409
XmaJI CCTAGG 1 cut(s) 797
XmiI GTMKAC 1 cut(s) 348
XmnI GAANNNNTTC 1 cut(s) 41
XspI CTAG 3 cut(s) 293, 359, 798
ZraI GACGTC 1 cut(s) 352
Zsp2I ATGCAT 1 cut(s) 538
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.