DnaJ domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G01710 AT2G01710 |
| fragaria_vesca | FvH4_5g35420 |
| malus_domestica | MD08G1196700.v1.1 MD15G1301600.v1.1 MD15G1384400.v1.1 |
| prunus_persica | Prupe.1G531000_v2.0.a1 |
| pyrus_communis | pycom08g16900 pycom15g34460 |
| rosa_chinensis | RchiOBHm_Chr7g0236821 |
| rosa_laevigata | RLG00000001059 |
| rosa_multiflora | Rmu_sc0002867.1_g000022 Rmu_sc0008851.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00224800 |
| rosa_rugosa | Rorug07G0299600 |
| rosa_samantha | Rh7AG454800 Rh7BG426000 Rh7CG473400 Rh7DG442700 |
| rosa_wichuraiana | Rw7G037750 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 354 |
| AccB1I | GGYRCC | 2 cut(s) | 1063, 1102 |
| AccBSI | CCGCTC | 1 cut(s) | 223 |
| AccI | GTMKAC | 1 cut(s) | 348 |
| AccII | CGCG | 4 cut(s) | 277, 279, 375, 1198 |
| AclWI | GGATC | 3 cut(s) | 167, 417, 423 |
| AcoI | YGGCCR | 1 cut(s) | 1193 |
| AcsI | RAATTY | 3 cut(s) | 868, 1135, 1156 |
| AcyI | GRCGYC | 1 cut(s) | 351 |
| AfaI | GTAC | 2 cut(s) | 398, 794 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 463, 481, 537, 568, 1105 |
| AgsI | TTSAA | 3 cut(s) | 520, 851, 1135 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 765 |
| AjnI | CCWGG | 3 cut(s) | 408, 891, 1058 |
| AluBI | AGCT | 8 cut(s) | 247, 273, 523, 586, 655, 753, 854, 948 |
| AluI | AGCT | 8 cut(s) | 247, 273, 523, 586, 655, 753, 854, 948 |
| Alw21I | GWGCWC | 1 cut(s) | 513 |
| Alw26I | GTCTC | 1 cut(s) | 1046 |
| AlwI | GGATC | 3 cut(s) | 167, 417, 423 |
| AoxI | GGCC | 6 cut(s) | 540, 558, 589, 889, 990, 1193 |
| ApoI | RAATTY | 3 cut(s) | 868, 1135, 1156 |
| AsiSI | GCGATCGC | 1 cut(s) | 159 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 41 |
| AspA2I | CCTAGG | 1 cut(s) | 797 |
| AspLEI | GCGC | 3 cut(s) | 279, 298, 375 |
| AspS9I | GGNCC | 5 cut(s) | 193, 540, 559, 589, 862 |
| AsuC2I | CCSGG | 3 cut(s) | 482, 557, 1100 |
| AsuHPI | GGTGA | 2 cut(s) | 604, 1133 |
| AvaII | GGWCC | 2 cut(s) | 193, 862 |
| AvrII | CCTAGG | 1 cut(s) | 797 |
| BaeGI | GKGCMC | 1 cut(s) | 1066 |
| BanI | GGYRCC | 2 cut(s) | 1063, 1102 |
| BbsI | GAAGAC | 1 cut(s) | 565 |
| Bbv12I | GWGCWC | 1 cut(s) | 513 |
| BccI | CCATC | 1 cut(s) | 1118 |
| BceAI | ACGGC | 8 cut(s) | 146, 326, 337, 476, 527, 706, 777, 1208 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 662, 696 |
| BciT130I | CCWGG | 3 cut(s) | 410, 893, 1060 |
| BclI | TGATCA | 1 cut(s) | 441 |
| BcnI | CCSGG | 3 cut(s) | 482, 557, 1100 |
| BcoDI | GTCTC | 1 cut(s) | 1046 |
| BfaI | CTAG | 3 cut(s) | 293, 359, 798 |
| BfmI | CTRYAG | 3 cut(s) | 251, 595, 624 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 989 |
| BglII | AGATCT | 3 cut(s) | 262, 333, 449 |
| BlnI | CCTAGG | 1 cut(s) | 797 |
| BlpI | GCTNAGC | 1 cut(s) | 949 |
| Bme1390I | CCNGG | 6 cut(s) | 410, 482, 557, 893, 1060, 1100 |
| Bme18I | GGWCC | 2 cut(s) | 193, 862 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 765 |
| BmgT120I | GGNCC | 5 cut(s) | 193, 540, 559, 589, 862 |
| BmiI | GGNNCC | 4 cut(s) | 325, 864, 1065, 1104 |
| BmrFI | CCNGG | 6 cut(s) | 410, 482, 557, 893, 1060, 1100 |
| BmrI | ACTGGG | 1 cut(s) | 596 |
| BmsI | GCATC | 3 cut(s) | 523, 886, 996 |
| BmuI | ACTGGG | 1 cut(s) | 596 |
| BpiI | GAAGAC | 1 cut(s) | 565 |
| BpmI | CTGGAG | 1 cut(s) | 392 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 949 |
| BpuMI | CCSGG | 3 cut(s) | 482, 557, 1100 |
| BsaBI | GATNNNNATC | 1 cut(s) | 177 |
| BsaHI | GRCGYC | 1 cut(s) | 351 |
| BsaJI | CCNNGG | 5 cut(s) | 797, 927, 1059, 1098, 1196 |
| BsaWI | WCCGGW | 1 cut(s) | 658 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 383, 413 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 463, 481, 537, 568, 1105 |
| Bse118I | RCCGGY | 3 cut(s) | 568, 988, 1105 |
| Bse1I | ACTGG | 2 cut(s) | 398, 602 |
| Bse3DI | GCAATG | 1 cut(s) | 1122 |
| Bse8I | GATNNNNATC | 1 cut(s) | 177 |
| BseBI | CCWGG | 3 cut(s) | 410, 893, 1060 |
| BseDI | CCNNGG | 5 cut(s) | 797, 927, 1059, 1098, 1196 |
| BseGI | GGATG | 2 cut(s) | 901, 1011 |
| BseJI | GATNNNNATC | 1 cut(s) | 177 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 463, 481, 537, 568, 1105 |
| BseMI | GCAATG | 1 cut(s) | 1122 |
| BseMII | CTCAG | 3 cut(s) | 257, 963, 1041 |
| BseNI | ACTGG | 2 cut(s) | 398, 602 |
| BseRI | GAGGAG | 1 cut(s) | 464 |
| BseSI | GKGCMC | 1 cut(s) | 1066 |
| BseX3I | CGGCCG | 1 cut(s) | 1193 |
| BseYI | CCCAGC | 2 cut(s) | 586, 912 |
| Bsh1236I | CGCG | 4 cut(s) | 277, 279, 375, 1198 |
| Bsh1285I | CGRYCG | 2 cut(s) | 159, 1196 |
| BshFI | GGCC | 6 cut(s) | 542, 560, 591, 891, 992, 1195 |
| BshNI | GGYRCC | 2 cut(s) | 1063, 1102 |
| BsiEI | CGRYCG | 2 cut(s) | 159, 1196 |
| BsiHKAI | GWGCWC | 1 cut(s) | 513 |
| BsiSI | CCGG | 7 cut(s) | 482, 557, 569, 659, 989, 1100, 1106 |
| BslFI | GGGAC | 4 cut(s) | 848, 1177, 1183, 1203 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 463, 481, 537, 568, 1105 |
| BsmAI | GTCTC | 1 cut(s) | 1046 |
| BsmFI | GGGAC | 4 cut(s) | 848, 1177, 1183, 1203 |
| BsmI | GAATGC | 1 cut(s) | 682 |
| BsnI | GGCC | 6 cut(s) | 542, 560, 591, 891, 992, 1195 |
| Bsp1286I | GDGCHC | 2 cut(s) | 513, 1066 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 949 |
| Bsp19I | CCATGG | 1 cut(s) | 927 |
| BspANI | GGCC | 6 cut(s) | 542, 560, 591, 891, 992, 1195 |
| BspCNI | CTCAG | 3 cut(s) | 258, 962, 1042 |
| BspFNI | CGCG | 4 cut(s) | 277, 279, 375, 1198 |
| BspLI | GGNNCC | 4 cut(s) | 325, 864, 1065, 1104 |
| BspMAI | CTGCAG | 1 cut(s) | 628 |
| BspPI | GGATC | 3 cut(s) | 167, 417, 423 |
| BspT107I | GGYRCC | 2 cut(s) | 1063, 1102 |
| BsrBI | CCGCTC | 1 cut(s) | 223 |
| BsrDI | GCAATG | 1 cut(s) | 1122 |
| BsrFI | RCCGGY | 3 cut(s) | 568, 988, 1105 |
| BsrI | ACTGG | 2 cut(s) | 398, 602 |
| BssAI | RCCGGY | 3 cut(s) | 568, 988, 1105 |
| BssECI | CCNNGG | 5 cut(s) | 797, 927, 1059, 1098, 1196 |
| BssNI | GRCGYC | 1 cut(s) | 351 |
| BssT1I | CCWWGG | 2 cut(s) | 797, 927 |
| Bst2UI | CCWGG | 3 cut(s) | 410, 893, 1060 |
| Bst4CI | ACNGT | 4 cut(s) | 776, 786, 908, 1081 |
| Bst6I | CTCTTC | 1 cut(s) | 1178 |
| BstACI | GRCGYC | 1 cut(s) | 351 |
| BstC8I | GCNNGC | 4 cut(s) | 275, 465, 513, 990 |
| BstDEI | CTNAG | 5 cut(s) | 266, 337, 949, 1050, 1209 |
| BstDSI | CCRYGG | 2 cut(s) | 927, 1196 |
| BstF5I | GGATG | 2 cut(s) | 901, 1011 |
| BstFNI | CGCG | 4 cut(s) | 277, 279, 375, 1198 |
| BstHHI | GCGC | 3 cut(s) | 279, 298, 375 |
| BstMAI | GTCTC | 1 cut(s) | 1046 |
| BstMCI | CGRYCG | 2 cut(s) | 159, 1196 |
| BstNI | CCWGG | 3 cut(s) | 410, 893, 1060 |
| BstSCI | CCNGG | 6 cut(s) | 408, 480, 555, 891, 1058, 1098 |
| BstSFI | CTRYAG | 3 cut(s) | 251, 595, 624 |
| BstSLI | GKGCMC | 1 cut(s) | 1066 |
| BstUI | CGCG | 4 cut(s) | 277, 279, 375, 1198 |
| BstV2I | GAAGAC | 1 cut(s) | 565 |
| BstX2I | RGATCY | 3 cut(s) | 262, 333, 449 |
| BstYI | RGATCY | 3 cut(s) | 262, 333, 449 |
| BstZI | CGGCCG | 1 cut(s) | 1193 |
| BsuRI | GGCC | 6 cut(s) | 542, 560, 591, 891, 992, 1195 |
| BtgI | CCRYGG | 2 cut(s) | 927, 1196 |
| BtsCI | GGATG | 2 cut(s) | 901, 1011 |
| Cac8I | GCNNGC | 4 cut(s) | 275, 465, 513, 990 |
| CfoI | GCGC | 3 cut(s) | 279, 298, 375 |
| Cfr10I | RCCGGY | 3 cut(s) | 568, 988, 1105 |
| Cfr13I | GGNCC | 5 cut(s) | 193, 540, 559, 589, 862 |
| Cfr42I | CCGCGG | 1 cut(s) | 1199 |
| Csp6I | GTAC | 2 cut(s) | 397, 793 |
| CviAII | CATG | 3 cut(s) | 34, 537, 928 |
| CviQI | GTAC | 2 cut(s) | 397, 793 |
| DdeI | CTNAG | 5 cut(s) | 266, 337, 949, 1050, 1209 |
| DriI | GACNNNNNGTC | 1 cut(s) | 765 |
| EaeI | YGGCCR | 1 cut(s) | 1193 |
| EagI | CGGCCG | 1 cut(s) | 1193 |
| Eam1104I | CTCTTC | 1 cut(s) | 1178 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 765 |
| EarI | CTCTTC | 1 cut(s) | 1178 |
| EclXI | CGGCCG | 1 cut(s) | 1193 |
| Eco130I | CCWWGG | 2 cut(s) | 797, 927 |
| Eco47I | GGWCC | 2 cut(s) | 193, 862 |
| Eco52I | CGGCCG | 1 cut(s) | 1193 |
| EcoRI | GAATTC | 1 cut(s) | 1156 |
| EcoRII | CCWGG | 3 cut(s) | 408, 891, 1058 |
| EcoT14I | CCWWGG | 2 cut(s) | 797, 927 |
| EcoT22I | ATGCAT | 1 cut(s) | 538 |
| ErhI | CCWWGG | 2 cut(s) | 797, 927 |
| FaeI | CATG | 3 cut(s) | 37, 540, 931 |
| FaiI | YATR | 9 cut(s) | 35, 78, 191, 538, 780, 782, 789, 807, 929 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 557, 589 |
| FaqI | GGGAC | 4 cut(s) | 848, 1177, 1183, 1203 |
| FatI | CATG | 3 cut(s) | 33, 536, 927 |
| FauI | CCCGC | 1 cut(s) | 660 |
| FbaI | TGATCA | 1 cut(s) | 441 |
| FblI | GTMKAC | 1 cut(s) | 348 |
| FokI | GGATG | 2 cut(s) | 908, 1018 |
| FspBI | CTAG | 3 cut(s) | 293, 359, 798 |
| GlaI | GCGC | 3 cut(s) | 278, 297, 374 |
| GsaI | CCCAGC | 2 cut(s) | 590, 916 |
| GsuI | CTGGAG | 1 cut(s) | 392 |
| HaeIII | GGCC | 6 cut(s) | 542, 560, 591, 891, 992, 1195 |
| HapII | CCGG | 7 cut(s) | 482, 557, 569, 659, 989, 1100, 1106 |
| HhaI | GCGC | 3 cut(s) | 279, 298, 375 |
| Hin1I | GRCGYC | 1 cut(s) | 351 |
| Hin1II | CATG | 3 cut(s) | 37, 540, 931 |
| Hin6I | GCGC | 3 cut(s) | 277, 296, 373 |
| HinP1I | GCGC | 3 cut(s) | 277, 296, 373 |
| HincII | GTYRAC | 1 cut(s) | 349 |
| HindII | GTYRAC | 1 cut(s) | 349 |
| HindIII | AAGCTT | 1 cut(s) | 653 |
| HpaII | CCGG | 7 cut(s) | 482, 557, 569, 659, 989, 1100, 1106 |
| HphI | GGTGA | 2 cut(s) | 604, 1133 |
| Hpy166II | GTNNAC | 4 cut(s) | 82, 349, 379, 1206 |
| Hpy188III | TCNNGA | 4 cut(s) | 445, 741, 757, 865 |
| Hpy8I | GTNNAC | 4 cut(s) | 82, 349, 379, 1206 |
| Hpy99I | CGWCG | 9 cut(s) | 167, 170, 347, 350, 353, 431, 462, 530, 692 |
| HpyAV | CCTTC | 3 cut(s) | 511, 526, 1003 |
| HpyCH4III | ACNGT | 4 cut(s) | 776, 786, 908, 1081 |
| HpyCH4IV | ACGT | 1 cut(s) | 351 |
| HpyCH4V | TGCA | 3 cut(s) | 536, 626, 886 |
| HpyF3I | CTNAG | 5 cut(s) | 266, 337, 949, 1050, 1209 |
| HpySE526I | ACGT | 1 cut(s) | 351 |
| Hsp92I | GRCGYC | 1 cut(s) | 351 |
| Hsp92II | CATG | 3 cut(s) | 37, 540, 931 |
| HspAI | GCGC | 3 cut(s) | 277, 296, 373 |
| KroI | GCCGGC | 1 cut(s) | 988 |
| KroNI | GCCGGC | 1 cut(s) | 990 |
| Ksp22I | TGATCA | 1 cut(s) | 441 |
| KspI | CCGCGG | 1 cut(s) | 1199 |
| LmnI | GCTCC | 3 cut(s) | 252, 329, 477 |
| LweI | GCATC | 3 cut(s) | 523, 886, 996 |
| MaeI | CTAG | 3 cut(s) | 293, 359, 798 |
| MaeII | ACGT | 1 cut(s) | 351 |
| MaeIII | GTNAC | 2 cut(s) | 225, 1075 |
| MbiI | CCGCTC | 1 cut(s) | 223 |
| MboII | GAAGA | 3 cut(s) | 565, 913, 1195 |
| MflI | RGATCY | 3 cut(s) | 262, 333, 449 |
| MhlI | GDGCHC | 2 cut(s) | 513, 1066 |
| MluCI | AATT | 6 cut(s) | 811, 832, 868, 1014, 1135, 1156 |
| MmeI | TCCRAC | 2 cut(s) | 450, 576 |
| Mph1103I | ATGCAT | 1 cut(s) | 538 |
| MroNI | GCCGGC | 1 cut(s) | 988 |
| MroXI | GAANNNNTTC | 1 cut(s) | 41 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1004 |
| MspA1I | CMGCKG | 2 cut(s) | 623, 1198 |
| MspI | CCGG | 7 cut(s) | 482, 557, 569, 659, 989, 1100, 1106 |
| MspR9I | CCNGG | 6 cut(s) | 410, 482, 557, 893, 1060, 1100 |
| Mva1269I | GAATGC | 1 cut(s) | 682 |
| MvaI | CCWGG | 3 cut(s) | 410, 893, 1060 |
| MvnI | CGCG | 4 cut(s) | 277, 279, 375, 1198 |
| NaeI | GCCGGC | 1 cut(s) | 990 |
| NciI | CCSGG | 3 cut(s) | 482, 557, 1100 |
| NcoI | CCATGG | 1 cut(s) | 927 |
| NgoMIV | GCCGGC | 1 cut(s) | 988 |
| NlaIII | CATG | 3 cut(s) | 37, 540, 931 |
| NlaIV | GGNNCC | 4 cut(s) | 325, 864, 1065, 1104 |
| NmeAIII | GCCGAG | 3 cut(s) | 244, 265, 532 |
| NmuCI | GTSAC | 1 cut(s) | 1075 |
| NsiI | ATGCAT | 1 cut(s) | 538 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 237, 504, 746 |
| PctI | GAATGC | 1 cut(s) | 682 |
| PdiI | GCCGGC | 1 cut(s) | 990 |
| PdmI | GAANNNNTTC | 1 cut(s) | 41 |
| Ple19I | CGATCG | 1 cut(s) | 159 |
| Psp6I | CCWGG | 3 cut(s) | 408, 891, 1058 |
| PspFI | CCCAGC | 2 cut(s) | 586, 912 |
| PspGI | CCWGG | 3 cut(s) | 408, 891, 1058 |
| PspN4I | GGNNCC | 4 cut(s) | 325, 864, 1065, 1104 |
| PspPI | GGNCC | 5 cut(s) | 193, 540, 559, 589, 862 |
| PstI | CTGCAG | 1 cut(s) | 628 |
| PsuI | RGATCY | 3 cut(s) | 262, 333, 449 |
| PvuI | CGATCG | 1 cut(s) | 159 |
| RgaI | GCGATCGC | 1 cut(s) | 159 |
| RsaI | GTAC | 2 cut(s) | 398, 794 |
| RsaNI | GTAC | 2 cut(s) | 397, 793 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1004 |
| SacII | CCGCGG | 1 cut(s) | 1199 |
| SalI | GTCGAC | 1 cut(s) | 347 |
| Sau96I | GGNCC | 5 cut(s) | 193, 540, 559, 589, 862 |
| ScrFI | CCNGG | 6 cut(s) | 410, 482, 557, 893, 1060, 1100 |
| SduI | GDGCHC | 2 cut(s) | 513, 1066 |
| SfaAI | GCGATCGC | 1 cut(s) | 159 |
| SfaNI | GCATC | 3 cut(s) | 523, 886, 996 |
| SfcI | CTRYAG | 3 cut(s) | 251, 595, 624 |
| Sfr303I | CCGCGG | 1 cut(s) | 1199 |
| SgfI | GCGATCGC | 1 cut(s) | 159 |
| SgrBI | CCGCGG | 1 cut(s) | 1199 |
| SgrDI | CGTCGACG | 1 cut(s) | 347 |
| SinI | GGWCC | 2 cut(s) | 193, 862 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1004 |
| Sse9I | AATT | 6 cut(s) | 811, 832, 868, 1014, 1135, 1156 |
| SspMI | CTAG | 3 cut(s) | 293, 359, 798 |
| StyD4I | CCNGG | 6 cut(s) | 408, 480, 555, 891, 1058, 1098 |
| StyI | CCWWGG | 2 cut(s) | 797, 927 |
| TaaI | ACNGT | 4 cut(s) | 776, 786, 908, 1081 |
| TaiI | ACGT | 1 cut(s) | 354 |
| TaqI | TCGA | 7 cut(s) | 348, 576, 606, 682, 740, 749, 1154 |
| TasI | AATT | 6 cut(s) | 811, 832, 868, 1014, 1135, 1156 |
| TseFI | GTSAC | 1 cut(s) | 1075 |
| Tsp45I | GTSAC | 1 cut(s) | 1075 |
| TspDTI | ATGAA | 1 cut(s) | 50 |
| VpaK11BI | GGWCC | 2 cut(s) | 193, 862 |
| XapI | RAATTY | 3 cut(s) | 868, 1135, 1156 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 409 |
| XmaJI | CCTAGG | 1 cut(s) | 797 |
| XmiI | GTMKAC | 1 cut(s) | 348 |
| XmnI | GAANNNNTTC | 1 cut(s) | 41 |
| XspI | CTAG | 3 cut(s) | 293, 359, 798 |
| ZraI | GACGTC | 1 cut(s) | 352 |
| Zsp2I | ATGCAT | 1 cut(s) | 538 |