Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0007452

Physical Location & Seq

Genomic Coordinates Reverse (-)

26004310 .. 26012440

Gene Structure 8131 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g35500.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3423 bp

ATGCATGTATCGGTGGATCTAGGGTTTCGGAGCCTGGTGCTGGTGGCCTGCGTCCTGGTGCCGGTGATCGGATTCTTCGTCGCTCGCCACAAATGGCGCCAAGCCGCGGCCAGAGGTGAGGAGATCAAGCGGCTGTTGGCTTTGGCCGCCGCGGAAGCTGCTAGGGCCGAGTTTGAGGTCACGGCTGGCTACGACGTCGTTTTGGCTCCTCCTGAGAAGAGGGATTCTTATTGCGCCGTCTGCTACTGCCCCACCACCACCCGCTGCGCCCGCTGCAAGGCGGTCCGGTACTGTTCTGGGAAATGTCAAATTGTTCACTGGCGACAAGGTCACAGGGAAAATTGCCAGCCAGCACCCACAGTTGATCCAAATGTTGATGGGGAAAGTGATGAAGGCCAGAAGGTGACCAAGAAAAATCTTGAATCTAATGCTGACAAGTTTGAAGCTAGGCAGTCAACTGAAAAAATCTCCGAGGAACCTGCAGTTCCTAATCCTGGTTGCCCTCTAGAGGTTCAGTGTGTAAAGGATGATGATAGTGAAGATGAATATCTTGCCAATAGGAAAGAGAAAAATTCTCCTTCTGGGTCATCAGCTACCTCTTTTTCTGGATTTTCTACTTCTACAAATGGTAGTGGATCTTCGGATGATGTTTCTGTCAGTGAAAGTGTTAGTTCTTTCGAACCTGACAGAGCAGATGCACACCAATCTGTTAATGATTCCATTGACATGCTGCAGAATTCATTTAATCTGGAGCAAATTGATCAATCTAGGCCATTATCCCCAAAGTTTGCTTGCTTGGTTGATTCTGTGGATGGATTTGCAAAACTAAGTAAGTCAAATCAGGTTAAACCTAGTTGCAATAATGGAGAGAACGAGCAGATATCAAACTCTTCTTCAGATGTGAATTATAATGGCAGAAGTAAGGGTCCATGCCGTCCAGCTACCAAGTCATGTACAACATCGTCTGATTTCTGGGGAAGAACTCTTGATTCTTTCGAGTCTGAGAGTGATGATCATGTGTCCAGTTCCTGTATTGCTAGTAAAAGCAAGATATCTCCTTCTGGATCCTCCTCTCACATTTCGTTTGAATCGTCCACTGCTGTCCCCCTACATACAGGAGACTCTGAGTCAATTGGCAGTATATTAGATGATGCTCTTCCAGACACTTCAGGGCATAAATCTGTATATGGGGCTGAGTTATTGGAAAAGATTAGTGGAGATGTTTCAAAGCTCAGGAACTCCACATCCCTAAACTTCAAAGGGTTGAGAAATGATGATAGTGGACCTCCCAATAATTCACCTACATTCAACTCTAGAGAAATTAAATTTATGGCATCATCCTCGTCTAATGGTCACAAATCTCTTAGCAGTGAAATTGTTTCAAGTAAAGAGGCTTTGCATTCTAGTAGAGTGGTGCCTACAAGTTCAGAAAGGTCGAGTCATATTTCTAAGAACAGCAGTAGAACGTTGAAGTCTAGAGAAGCTGATTGTCAGTCATCTAGTGTTTCAGATGCTTGTCTTGTATCTGGTGGTCGAGGCTCTTCCGGTGTAAGTGTAAAATCTGGAAACGGTCATTCTGTTGAGGCTAGTGATACTGTTTCATCTCAGGTTACAAGATCCTTAAATGATAAGACTGGCTTGAAGACTTCTGTATTTAAAGTTTTTGATCAGTTTAGAGGACCTAAACTCTCAAAGCACTATCCTTTGGGAGTTGGGGGTGAAATTGCAGGAAAACATGCTGAGAAGGAACTATTTCCGTATGAAGTATTTGTCAAGCTTTACAATTGGAACAAGGTGGAATTGCACCCTTCTGGCCTTATAAACTGTGGTAACAGCTGCTATGCCAATGCAGTCCTCCAATGCTTGGCATTTACTCCGCCTCTGACTGCTTATTTGCTTCAGGGACTCCATTCTAAATCTTGTGCAAAGAAGGATTGGTGTTTCATGTGTGAGTTTGAAATTCTAATTTTGAAGGCAAAGGAAGGGAAGTCTCCACTGTCTCCTATTGGAATACTTTCCCAGCTAAGAAATATTGGAAGTCAACTTGGTAATGGGAGAGAGGAAGATGCCCATGAGTTTTTAAGACATGCTATTGACACAATGCAATCCGTTTGCCTTATGGAATCTGGGGTTAATGCTCCGCGTTCTTTGAAGGAGGAAACAACTTTAATAGGCCTTACCTTTGGAGGTTACCTTCGATCAAAGATAAAATGCTCAAGGTGCCAAGGCAAGTCGGAGCGGCAAGAAAGAATGATGGATCTTACTGTGGAAATTGAGGGCGACATAGCAACCCTGGAAGAGGCTCTTCGGCGATTTACTGGCACTGAGGTCTTAGATGGTGAAAATAAGTACCAATGTAGCAGATGCAAATCTTATGAGAAGGCTAAAAAGAAGTTGACAATACTGGAAGCTCCCAATGTCCTTACTATTGCATTGAAGCGATTTCAGTCCGGGAAATTTGGGAAGATCAATAAGCCCATACGGTTTCCTGAAATTCTGAACTTGGCGCCTTACATGAGTGGCACAAGTGATAAATCACCTATATACAAGCTGTATGGGGTTGTTGTTCACTTGGATGTCATGAATGCCGCATTTTCTGGTCATTATGTGTGCTATGTTAAGAATCTGCAGAACAAGTGGTTCAAGGTTGATGACAGCACGGTGACTGCTGTAGAGCTTGAAAATGTCTTGGCGAAAGGGGCGTACATGCTTCTTTATTCAAGGTGCTCGGCAAGAGCCCCGAGATTAATAAGGAACAGAATAATATCTTCAGATCCAAAACATAGAGCCATTCCTTCATGTATCAGTGGAAAGAGTACCAATTTGAAATCAAATTCCTTTTCCACTCATCCAAGTGGTTCTCAATCCCCTACTTGTCCTCCAGAGAATTCTACCAGTTATCCACTATTGCAAAGGATTTCAGAAGAGGACTCATCAAGTGACAATTCTTCTCTTATCAGCAGCCGTTCTGACGAAGGTTCTTCTAGTACTGATAGCACATGGTATTCTACTAGCACCGATGATTGCTCCGATTATTCATGCGGTGATCCAGGACGTGGGTGGAATAGCCCTGGGAGAAGTTTTTCGGATTGTGACAGTTCTTCCTCATCCTCTTCCTCACCCATGAGTTTGAAGCACTCGCCACTTTCTGATTCAAACCGGTACGCTTCAAGTGCCAGCGAGTCCGTAGGATTTTGGGACAGCCGACCTTTCGAGGATAGCCGCAGGTTTGCAGATTCAGATGGCAAAGTGAGTGGTCCTTTTTTGAATTCTGACATCACTAAACAGTGTAGAAAGTTAGCCAGTAGTAGTAGTAGTAGTAGTAGCAGTAGAAAGTTAACCGACTCTGAGAGATTAGGACGTGATTCGGTAAGCAATGTAAAATTAAGAACATCGAATTGCGAAAGAACAGCAGGCGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0006464 GO:0006508 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0008283 GO:0009628 GO:0009651 GO:0009791 GO:0009908 GO:0009987 GO:0016579 GO:0016787 GO:0019538 GO:0019783 GO:0022414 GO:0022622 GO:0032501 GO:0032502 GO:0036211 GO:0036459 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0047484 GO:0048364 GO:0048366 GO:0048367 GO:0048583 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050896 GO:0061458 GO:0065007 GO:0070011 GO:0070646 GO:0070647 GO:0071704 GO:0080134 GO:0090567 GO:0099402 GO:0101005 GO:0140096 GO:1901000 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH zf-MYND

Protein Analysis

1141

Amino Acids

123.77

Weight (kDa)

7.42

Isoelectric Point (pI)

55.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-MYND	PF01753	78 - 115	3.8e-07	MYND finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007452)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24560
fragaria_vesca	FvH4_5g35500 FvH4_5g35500 FvH4_5g35500 FvH4_5g35500
malus_domestica	MD08G1196200.v1.1 MD15G1384000.v1.1
prunus_persica	Prupe.1G530100_v2.0.a1 Prupe.1G530100_v2.0.a1
pyrus_communis	pycom08g16850 pycom15g34370
rosa_chinensis	RchiOBHm_Chr7g0236881
rosa_laevigata	RLG00000001053
rosa_multiflora	Rmu_co8158526.1_g000001 Rmu_sc0002867.1_g000006 Rmu_sc0017481.1_g000004 Rmu_sc0032933.1_g000001
rosa_roxburghii	Rroxscaffold_3G00224730
rosa_rugosa	Rorug07G0300500 Rorug07G0300600
rosa_samantha	Rh7AG455400 Rh7BG426600 Rh7CG474200 Rh7DG443400
rosa_wichuraiana	Rw7G037810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	909, 1820
AatII	GACGTC	1 cut(s)	198
Acc36I	ACCTGC	2 cut(s)	487, 3216
AccB1I	GGYRCC	5 cut(s)	58, 96, 1414, 2220, 2506
AccB7I	CCANNNNNTGG	2 cut(s)	1864, 3056
AccBSI	CCGCTC	1 cut(s)	2239
AccII	CGCG	3 cut(s)	107, 152, 2143
AclI	AACGTT	1 cut(s)	1466
AclWI	GGATC	9 cut(s)	24, 359, 643, 1059, 1072, 1611, 2265, 2768, 3041
AcoI	YGGCCR	2 cut(s)	108, 144
AcsI	RAATTY	9 cut(s)	571, 736, 1325, 1959, 2456, 2493, 2833, 2887, 3268
AcuI	CTGAAG	4 cut(s)	879, 1152, 1883, 2754
AcyI	GRCGYC	3 cut(s)	97, 195, 2507
AfaI	GTAC	7 cut(s)	290, 955, 2351, 2705, 2818, 2989, 3164
AgeI	ACCGGT	1 cut(s)	3159
AhdI	GACNNNNNGTC	1 cut(s)	1126
AjiI	CACGTC	2 cut(s)	3056, 3362
AjnI	CCWGG	6 cut(s)	33, 54, 493, 2292, 3049, 3070
AloI	GAACNNNNNNTCC	2 cut(s)	1229, 1261
Alw21I	GWGCWC	1 cut(s)	2729
Alw26I	GTCTC	3 cut(s)	1113, 1995, 2004
AlwI	GGATC	9 cut(s)	24, 359, 643, 1059, 1072, 1611, 2265, 2768, 3041
AlwNI	CAGNNNCTG	1 cut(s)	1029
Ama87I	CYCGRG	1 cut(s)	2740
AoxI	GGCC	8 cut(s)	45, 108, 144, 165, 394, 770, 1813, 2173
ApeKI	GCWGC	6 cut(s)	158, 264, 273, 730, 1836, 2961
ApoI	RAATTY	9 cut(s)	571, 736, 1325, 1959, 2456, 2493, 2833, 2887, 3268
ArsI	GACNNNNNNTTYG	2 cut(s)	1876, 1908
AseI	ATTAAT	1 cut(s)	2747
AsiGI	ACCGGT	1 cut(s)	3159
Asp700I	GAANNNNTTC	3 cut(s)	1752, 2014, 3082
AspLEI	GCGC	4 cut(s)	99, 236, 269, 2509
AspS9I	GGNCC	6 cut(s)	165, 283, 926, 1283, 1679, 3257
AsuC2I	CCSGG	1 cut(s)	2452
AsuII	TTCGAA	1 cut(s)	678
AvaI	CYCGRG	1 cut(s)	2740
AvaII	GGWCC	5 cut(s)	283, 926, 1283, 1679, 3257
BamHI	GGATCC	1 cut(s)	1064
BanI	GGYRCC	5 cut(s)	58, 96, 1414, 2220, 2506
BanII	GRGCYC	1 cut(s)	2740
BarI	GAAGNNNNNNTAC	2 cut(s)	622, 654
BbsI	GAAGAC	1 cut(s)	1649
Bbv12I	GWGCWC	1 cut(s)	2729
BbvI	GCAGC	6 cut(s)	145, 251, 260, 717, 1823, 2973
BccI	CCATC	5 cut(s)	371, 806, 2248, 2330, 3236
BceAI	ACGGC	4 cut(s)	198, 221, 918, 2949
BcgI	CGANNNNNNTGC	4 cut(s)	461, 495, 1323, 1357
BciT130I	CCWGG	6 cut(s)	35, 56, 495, 2294, 3051, 3072
BclI	TGATCA	3 cut(s)	760, 1012, 1666
BcnI	CCSGG	1 cut(s)	2452
BcoDI	GTCTC	3 cut(s)	1113, 1995, 2004
BfmI	CTRYAG	4 cut(s)	480, 731, 2627, 2670
BfoI	RGCGCY	2 cut(s)	100, 2510
BfuAI	ACCTGC	2 cut(s)	487, 3216
BmcAI	AGTACT	1 cut(s)	2989
Bme1390I	CCNGG	7 cut(s)	35, 56, 495, 2294, 2452, 3051, 3072
Bme18I	GGWCC	5 cut(s)	283, 926, 1283, 1679, 3257
BmeRI	GACNNNNNGTC	1 cut(s)	1126
BmeT110I	CYCGRG	1 cut(s)	2740
BmgBI	CACGTC	2 cut(s)	3056, 3362
BmgT120I	GGNCC	6 cut(s)	165, 283, 926, 1283, 1679, 3257
BmrFI	CCNGG	7 cut(s)	35, 56, 495, 2294, 2452, 3051, 3072
BmsI	GCATC	6 cut(s)	685, 1141, 1343, 1501, 2056, 2354
BpiI	GAAGAC	1 cut(s)	1649
BpmI	CTGGAG	2 cut(s)	770, 2865
Bpu10I	CCTNAGC	1 cut(s)	1232
Bpu14I	TTCGAA	1 cut(s)	678
BpuEI	CTTGAG	1 cut(s)	2200
BpuMI	CCSGG	1 cut(s)	2452
BsaBI	GATNNNNATC	2 cut(s)	546, 2368
BsaHI	GRCGYC	3 cut(s)	97, 195, 2507
BsaJI	CCNNGG	7 cut(s)	105, 150, 471, 2224, 2292, 3070, 3071
BsaWI	WCCGGW	3 cut(s)	285, 1544, 3159
BsaXI	ACNNNNNCTCC	2 cut(s)	2863, 2893
Bse118I	RCCGGY	2 cut(s)	61, 3159
Bse1I	ACTGG	7 cut(s)	323, 1023, 1639, 2323, 2409, 2895, 3303
Bse3DI	GCAATG	1 cut(s)	3382
Bse8I	GATNNNNATC	2 cut(s)	546, 2368
BseBI	CCWGG	6 cut(s)	35, 56, 495, 2294, 3051, 3072
BseDI	CCNNGG	7 cut(s)	105, 150, 471, 2224, 2292, 3070, 3071
BseGI	GGATG	8 cut(s)	532, 649, 817, 1244, 1337, 2581, 2848, 3107
BseJI	GATNNNNATC	2 cut(s)	546, 2368
BseMI	GCAATG	1 cut(s)	3382
BseMII	CTCAG	9 cut(s)	204, 993, 1116, 1185, 1246, 1619, 1731, 2316, 3339
BseNI	ACTGG	7 cut(s)	323, 1023, 1639, 2323, 2409, 2895, 3303
BseRI	GAGGAG	3 cut(s)	134, 198, 1060
BseXI	GCAGC	6 cut(s)	145, 251, 260, 717, 1823, 2973
BseYI	CCCAGC	1 cut(s)	2019
Bsh1236I	CGCG	3 cut(s)	107, 152, 2143
BshFI	GGCC	8 cut(s)	47, 110, 146, 167, 396, 772, 1815, 2175
BshNI	GGYRCC	5 cut(s)	58, 96, 1414, 2220, 2506
BshTI	ACCGGT	1 cut(s)	3159
BsiHKAI	GWGCWC	1 cut(s)	2729
BsiHKCI	CYCGRG	1 cut(s)	2740
BsiSI	CCGG	5 cut(s)	62, 286, 1545, 2451, 3160
BslFI	GGGAC	3 cut(s)	1088, 1917, 3212
BsmAI	GTCTC	3 cut(s)	1113, 1995, 2004
BsmFI	GGGAC	3 cut(s)	1088, 1917, 3212
BsmI	GAATGC	2 cut(s)	1399, 2590
BsnI	GGCC	8 cut(s)	47, 110, 146, 167, 396, 772, 1815, 2175
BsoBI	CYCGRG	1 cut(s)	2740
Bsp119I	TTCGAA	1 cut(s)	678
Bsp1286I	GDGCHC	2 cut(s)	2729, 2740
Bsp1407I	TGTACA	1 cut(s)	953
BspANI	GGCC	8 cut(s)	47, 110, 146, 167, 396, 772, 1815, 2175
BspCNI	CTCAG	9 cut(s)	205, 994, 1117, 1186, 1245, 1618, 1732, 2317, 3340
BspFNI	CGCG	3 cut(s)	107, 152, 2143
BspHI	TCATGA	1 cut(s)	2580
BspMAI	CTGCAG	3 cut(s)	484, 735, 2631
BspMI	ACCTGC	2 cut(s)	487, 3216
BspPI	GGATC	9 cut(s)	24, 359, 643, 1059, 1072, 1611, 2265, 2768, 3041
BspQI	GCTCTTC	3 cut(s)	1161, 1546, 2310
BspT104I	TTCGAA	1 cut(s)	678
BspT107I	GGYRCC	5 cut(s)	58, 96, 1414, 2220, 2506
BsrBI	CCGCTC	1 cut(s)	2239
BsrDI	GCAATG	1 cut(s)	3382
BsrFI	RCCGGY	2 cut(s)	61, 3159
BsrGI	TGTACA	1 cut(s)	953
BsrI	ACTGG	7 cut(s)	323, 1023, 1639, 2323, 2409, 2895, 3303
BssAI	RCCGGY	2 cut(s)	61, 3159
BssECI	CCNNGG	7 cut(s)	105, 150, 471, 2224, 2292, 3070, 3071
BssNI	GRCGYC	3 cut(s)	97, 195, 2507
BssT1I	CCWWGG	1 cut(s)	2224
Bst2UI	CCWGG	6 cut(s)	35, 56, 495, 2294, 3051, 3072
Bst6I	CTCTTC	8 cut(s)	212, 895, 1161, 1546, 2292, 2310, 2919, 3118
BstACI	GRCGYC	3 cut(s)	97, 195, 2507
BstAUI	TGTACA	1 cut(s)	953
BstBI	TTCGAA	1 cut(s)	678
BstC8I	GCNNGC	9 cut(s)	49, 85, 187, 271, 347, 351, 793, 3178, 3415
BstDSI	CCRYGG	2 cut(s)	105, 150
BstEII	GGTNACC	2 cut(s)	403, 2189
BstENI	CCTNNNNNAGG	1 cut(s)	2297
BstF5I	GGATG	8 cut(s)	532, 649, 817, 1244, 1337, 2581, 2848, 3107
BstFNI	CGCG	3 cut(s)	107, 152, 2143
BstH2I	RGCGCY	2 cut(s)	100, 2510
BstHHI	GCGC	4 cut(s)	99, 236, 269, 2509
BstMAI	GTCTC	3 cut(s)	1113, 1995, 2004
BstNI	CCWGG	6 cut(s)	35, 56, 495, 2294, 3051, 3072
BstNSI	RCATGY	5 cut(s)	8, 730, 1739, 2090, 2710
BstPI	GGTNACC	2 cut(s)	403, 2189
BstSCI	CCNGG	7 cut(s)	33, 54, 493, 2292, 2450, 3049, 3070
BstSFI	CTRYAG	4 cut(s)	480, 731, 2627, 2670
BstUI	CGCG	3 cut(s)	107, 152, 2143
BstV1I	GCAGC	6 cut(s)	145, 251, 260, 717, 1823, 2973
BstV2I	GAAGAC	1 cut(s)	1649
BstX2I	RGATCY	6 cut(s)	16, 635, 1064, 1616, 2257, 2773
BstYI	RGATCY	6 cut(s)	16, 635, 1064, 1616, 2257, 2773
BsuRI	GGCC	8 cut(s)	47, 110, 146, 167, 396, 772, 1815, 2175
BtgI	CCRYGG	2 cut(s)	105, 150
BtrI	CACGTC	2 cut(s)	3056, 3362
BtsCI	GGATG	8 cut(s)	532, 649, 817, 1244, 1337, 2581, 2848, 3107
BtsI	GCAGTG	2 cut(s)	1095, 1375
BtsIMutI	CAGTG	9 cut(s)	316, 521, 664, 1095, 1375, 1994, 2322, 2812, 3293
BveI	ACCTGC	2 cut(s)	487, 3216
Cac8I	GCNNGC	9 cut(s)	49, 85, 187, 271, 347, 351, 793, 3178, 3415
CaiI	CAGNNNCTG	1 cut(s)	1029
CciI	TCATGA	1 cut(s)	2580
CfoI	GCGC	4 cut(s)	99, 236, 269, 2509
Cfr10I	RCCGGY	2 cut(s)	61, 3159
Cfr13I	GGNCC	6 cut(s)	165, 283, 926, 1283, 1679, 3257
Cfr42I	CCGCGG	2 cut(s)	108, 153
CpoI	CGGWCCG	1 cut(s)	283
CseI	GACGC	1 cut(s)	40
Csp6I	GTAC	7 cut(s)	289, 954, 2350, 2704, 2817, 2988, 3163
CspAI	ACCGGT	1 cut(s)	3159
CspCI	CAANNNNNGTGG	2 cut(s)	3235, 3270
CspI	CGGWCCG	1 cut(s)	283
CviQI	GTAC	7 cut(s)	289, 954, 2350, 2704, 2817, 2988, 3163
DinI	GGCGCC	2 cut(s)	98, 2508
DraI	TTTAAA	1 cut(s)	1657
DriI	GACNNNNNGTC	1 cut(s)	1126
EaeI	YGGCCR	2 cut(s)	108, 144
Eam1104I	CTCTTC	8 cut(s)	212, 895, 1161, 1546, 2292, 2310, 2919, 3118
Eam1105I	GACNNNNNGTC	1 cut(s)	1126
EarI	CTCTTC	8 cut(s)	212, 895, 1161, 1546, 2292, 2310, 2919, 3118
EciI	GGCGGA	1 cut(s)	1866
Eco130I	CCWWGG	1 cut(s)	2224
Eco147I	AGGCCT	1 cut(s)	2175
Eco24I	GRGCYC	1 cut(s)	2740
Eco32I	GATATC	2 cut(s)	882, 1053
Eco47I	GGWCC	5 cut(s)	283, 926, 1283, 1679, 3257
Eco57I	CTGAAG	4 cut(s)	879, 1152, 1883, 2754
Eco88I	CYCGRG	1 cut(s)	2740
Eco91I	GGTNACC	2 cut(s)	403, 2189
EcoNI	CCTNNNNNAGG	1 cut(s)	2297
EcoO109I	RGGNCCY	1 cut(s)	1679
EcoO65I	GGTNACC	2 cut(s)	403, 2189
EcoRI	GAATTC	3 cut(s)	736, 2887, 3268
EcoRII	CCWGG	6 cut(s)	33, 54, 493, 2292, 3049, 3070
EcoRV	GATATC	2 cut(s)	882, 1053
EcoT14I	CCWWGG	1 cut(s)	2224
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	2740
EgeI	GGCGCC	2 cut(s)	98, 2508
EheI	GGCGCC	2 cut(s)	98, 2508
ErhI	CCWWGG	1 cut(s)	2224
FalI	AAGNNNNNCTT	4 cut(s)	1622, 1654, 2289, 2321
FaqI	GGGAC	3 cut(s)	1088, 1917, 3212
FauI	CCCGC	2 cut(s)	269, 278
FbaI	TGATCA	3 cut(s)	760, 1012, 1666
FokI	GGATG	8 cut(s)	539, 656, 824, 1231, 1324, 2588, 2835, 3094
FriOI	GRGCYC	1 cut(s)	2740
GlaI	GCGC	4 cut(s)	98, 235, 268, 2508
GsaI	CCCAGC	1 cut(s)	2023
GsuI	CTGGAG	2 cut(s)	770, 2865
HaeII	RGCGCY	2 cut(s)	100, 2510
HaeIII	GGCC	8 cut(s)	47, 110, 146, 167, 396, 772, 1815, 2175
HapII	CCGG	5 cut(s)	62, 286, 1545, 2451, 3160
HgaI	GACGC	1 cut(s)	40
HhaI	GCGC	4 cut(s)	99, 236, 269, 2509
Hin1I	GRCGYC	3 cut(s)	97, 195, 2507
Hin6I	GCGC	4 cut(s)	97, 234, 267, 2507
HinP1I	GCGC	4 cut(s)	97, 234, 267, 2507
HincII	GTYRAC	4 cut(s)	456, 2042, 2397, 3339
HindII	GTYRAC	4 cut(s)	456, 2042, 2397, 3339
HindIII	AAGCTT	1 cut(s)	1775
HpaI	GTTAAC	1 cut(s)	3339
HpaII	CCGG	5 cut(s)	62, 286, 1545, 2451, 3160
Hpy166II	GTNNAC	8 cut(s)	316, 456, 1095, 1283, 2042, 2397, 2569, 3339
Hpy8I	GTNNAC	8 cut(s)	316, 456, 1095, 1283, 2042, 2397, 2569, 3339
Hpy99I	CGWCG	3 cut(s)	83, 197, 200
HpyCH4IV	ACGT	4 cut(s)	195, 1466, 3055, 3361
HpySE526I	ACGT	4 cut(s)	195, 1466, 3055, 3361
Hsp92I	GRCGYC	3 cut(s)	97, 195, 2507
HspAI	GCGC	4 cut(s)	97, 234, 267, 2507
KasI	GGCGCC	2 cut(s)	96, 2506
Ksp22I	TGATCA	3 cut(s)	760, 1012, 1666
KspAI	GTTAAC	1 cut(s)	3339
KspI	CCGCGG	2 cut(s)	108, 153
LguI	GCTCTTC	3 cut(s)	1161, 1546, 2310
LmnI	GCTCC	7 cut(s)	30, 211, 751, 2143, 2236, 2416, 3032
Lsp1109I	GCAGC	6 cut(s)	145, 251, 260, 717, 1823, 2973
LweI	GCATC	6 cut(s)	685, 1141, 1343, 1501, 2056, 2354
MaeII	ACGT	4 cut(s)	195, 1466, 3055, 3361
MbiI	CCGCTC	1 cut(s)	2239
MfeI	CAATTG	2 cut(s)	1131, 1783
MflI	RGATCY	6 cut(s)	16, 635, 1064, 1616, 2257, 2773
MhlI	GDGCHC	2 cut(s)	2729, 2740
Mly113I	GGCGCC	2 cut(s)	97, 2507
MlyI	GAGTC	8 cut(s)	1007, 1115, 1136, 1447, 1899, 2924, 3191, 3338
MmeI	TCCRAC	1 cut(s)	2214
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	3 cut(s)	1752, 2014, 3082
MslI	CAYNNNNRTG	3 cut(s)	725, 2574, 2853
MspA1I	CMGCKG	5 cut(s)	107, 152, 264, 273, 1836
MspI	CCGG	5 cut(s)	62, 286, 1545, 2451, 3160
MspR9I	CCNGG	7 cut(s)	35, 56, 495, 2294, 2452, 3051, 3072
MunI	CAATTG	2 cut(s)	1131, 1783
Mva1269I	GAATGC	2 cut(s)	1399, 2590
MvaI	CCWGG	6 cut(s)	35, 56, 495, 2294, 3051, 3072
MvnI	CGCG	3 cut(s)	107, 152, 2143
NarI	GGCGCC	2 cut(s)	97, 2507
NciI	CCSGG	1 cut(s)	2452
NmeAIII	GCCGAG	2 cut(s)	193, 2708
NmuCI	GTSAC	7 cut(s)	178, 329, 403, 1352, 2662, 2939, 3092
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	5 cut(s)	8, 730, 1739, 2090, 2710
NspV	TTCGAA	1 cut(s)	678
PagI	TCATGA	1 cut(s)	2580
PasI	CCCWGGG	1 cut(s)	3071
PceI	AGGCCT	1 cut(s)	2175
PciSI	GCTCTTC	3 cut(s)	1161, 1546, 2310
PcsI	WCGNNNNNNNCGW	2 cut(s)	75, 1088
PctI	GAATGC	2 cut(s)	1399, 2590
PdmI	GAANNNNTTC	3 cut(s)	1752, 2014, 3082
PflFI	GACNNNGTC	1 cut(s)	327
PflMI	CCANNNNNTGG	2 cut(s)	1864, 3056
PfoI	TCCNGGA	2 cut(s)	2450, 3049
PinAI	ACCGGT	1 cut(s)	3159
PleI	GAGTC	8 cut(s)	1006, 1115, 1135, 1446, 1899, 2924, 3190, 3338
PluTI	GGCGCC	2 cut(s)	100, 2510
PpsI	GAGTC	8 cut(s)	1006, 1115, 1135, 1446, 1899, 2924, 3190, 3338
PpuMI	RGGWCCY	1 cut(s)	1679
PshBI	ATTAAT	1 cut(s)	2747
PsiI	TTATAA	2 cut(s)	909, 1820
Psp1406I	AACGTT	1 cut(s)	1466
Psp5II	RGGWCCY	1 cut(s)	1679
Psp6I	CCWGG	6 cut(s)	33, 54, 493, 2292, 3049, 3070
PspEI	GGTNACC	2 cut(s)	403, 2189
PspFI	CCCAGC	1 cut(s)	2019
PspGI	CCWGG	6 cut(s)	33, 54, 493, 2292, 3049, 3070
PspPI	GGNCC	6 cut(s)	165, 283, 926, 1283, 1679, 3257
PspPPI	RGGWCCY	1 cut(s)	1679
PstI	CTGCAG	3 cut(s)	484, 735, 2631
PstNI	CAGNNNCTG	1 cut(s)	1029
PsuI	RGATCY	6 cut(s)	16, 635, 1064, 1616, 2257, 2773
PsyI	GACNNNGTC	1 cut(s)	327
PvuII	CAGCTG	1 cut(s)	1836
RsaI	GTAC	7 cut(s)	290, 955, 2351, 2705, 2818, 2989, 3164
RsaNI	GTAC	7 cut(s)	289, 954, 2350, 2704, 2817, 2988, 3163
RseI	CAYNNNNRTG	3 cut(s)	725, 2574, 2853
Rsr2I	CGGWCCG	1 cut(s)	283
RsrII	CGGWCCG	1 cut(s)	283
SacII	CCGCGG	2 cut(s)	108, 153
SapI	GCTCTTC	3 cut(s)	1161, 1546, 2310
Sau96I	GGNCC	6 cut(s)	165, 283, 926, 1283, 1679, 3257
ScaI	AGTACT	1 cut(s)	2989
SchI	GAGTC	8 cut(s)	1007, 1115, 1136, 1447, 1899, 2924, 3191, 3338
ScrFI	CCNGG	7 cut(s)	35, 56, 495, 2294, 2452, 3051, 3072
SduI	GDGCHC	2 cut(s)	2729, 2740
SfaNI	GCATC	6 cut(s)	685, 1141, 1343, 1501, 2056, 2354
SfcI	CTRYAG	4 cut(s)	480, 731, 2627, 2670
SfoI	GGCGCC	2 cut(s)	98, 2508
Sfr303I	CCGCGG	2 cut(s)	108, 153
SfuI	TTCGAA	1 cut(s)	678
SgrBI	CCGCGG	2 cut(s)	108, 153
SinI	GGWCC	5 cut(s)	283, 926, 1283, 1679, 3257
SmiMI	CAYNNNNRTG	3 cut(s)	725, 2574, 2853
SmlI	CTYRAG	1 cut(s)	2215
SmoI	CTYRAG	1 cut(s)	2215
SseBI	AGGCCT	1 cut(s)	2175
SspDI	GGCGCC	2 cut(s)	96, 2506
SspI	AATATT	1 cut(s)	2032
StuI	AGGCCT	1 cut(s)	2175
StyD4I	CCNGG	7 cut(s)	33, 54, 493, 2292, 2450, 3049, 3070
StyI	CCWWGG	1 cut(s)	2224
TaiI	ACGT	4 cut(s)	198, 1469, 3058, 3364
TaqI	TCGA	7 cut(s)	678, 996, 1436, 1534, 2197, 3213, 3395
TatI	WGTACW	2 cut(s)	953, 2987
TauI	GCSGC	8 cut(s)	107, 110, 133, 149, 152, 2242, 2591, 3225
TscAI	CASTG	9 cut(s)	323, 521, 664, 1102, 1375, 2001, 2329, 2812, 3293
TseFI	GTSAC	7 cut(s)	178, 329, 403, 1352, 2662, 2939, 3092
TseI	GCWGC	6 cut(s)	158, 264, 273, 730, 1836, 2961
Tsp45I	GTSAC	7 cut(s)	178, 329, 403, 1352, 2662, 2939, 3092
TspDTI	ATGAA	9 cut(s)	405, 558, 729, 1590, 1776, 1933, 2597, 2787, 3027
TspGWI	ACGGA	3 cut(s)	1746, 2098, 3175
TspRI	CASTG	9 cut(s)	323, 521, 664, 1102, 1375, 2001, 2329, 2812, 3293
Tth111I	GACNNNGTC	1 cut(s)	327
Van91I	CCANNNNNTGG	2 cut(s)	1864, 3056
VpaK11BI	GGWCC	5 cut(s)	283, 926, 1283, 1679, 3257
VspI	ATTAAT	1 cut(s)	2747
XagI	CCTNNNNNAGG	1 cut(s)	2297
XapI	RAATTY	9 cut(s)	571, 736, 1325, 1959, 2456, 2493, 2833, 2887, 3268
XbaI	TCTAGA	3 cut(s)	505, 1313, 1475
XceI	RCATGY	5 cut(s)	8, 730, 1739, 2090, 2710
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3057
XmnI	GAANNNNTTC	3 cut(s)	1752, 2014, 3082
ZraI	GACGTC	1 cut(s)	196
ZrmI	AGTACT	1 cut(s)	2989
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.