Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0007452

Physical Location & Seq

Genomic Coordinates Forward (+)

43330169 .. 43338208

Gene Structure 8040 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G530100.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3345 bp

ATGCATGTGGTTGGGGATCTAGGGTTTCGGAGCCTCGTGCTGGTGGCTTGTTTTTTGGTGCCGGTGATCGGCTTCTTCGTGGTCCGAAGGAAATGGCGCCTCGCGAAGGCCAGAACGGAGGAGATCAAGAGGCTTTTGATCTTGGCCAAGGAGGAAGCTGCTAGAGCTGAGTTTGAGGTCGCGGCTGGGTACGCCGCCGTTTCGGTTGCTGAAAATAAAGGTTCTTATTGCGCTGTTTGTTACTGCCCCACCACCACGCGCTGCGCCCGCTGCAAGGCGGTTCGGTACTGTTCTGGGAAGTGTCAAATTATTCACTGGCGACAAGGTCACAAGGAAGAATGCCATCCTCCTAGTCATCAAAGTATTGACGGGGAAGGTGATGCTGGCCTGAACGTGGCCAAGAAAGACCTTGAAATTAATACTGACAAGATTGAAAACAGGCAGTCAGTTGAAAGATTCTCTGAGGAACCTGCATTGCCTAATCCTGGTTGCCCTCCCGAAATTCAATGTATAACAGATGATGATAGTGAAGATGAATTTCTTTCCGAGAGGAAAGGACCAAATTCTACTTCAGAATCATCAGCTACCTCTTTTTCTGGATTTTCTACTTCTGCCAGCTGTACTGGATCTTCGGATGATGCTTCTGTCAGTGAGAGTGTTAGTTCATGTGAATCTGACAGACCAGATGGGCATCCATCTGCTAATGATGCCCTTGACATGCTACACACTTCCTTTAATGTCGACAACATTGATCAATCTAGGCCATTATCTCCAAAATTTGCTAGCTTGGTTGATTCTGTTAATGGTTTTGCTAAATTAGGTAAGTTAAGTCAGGCTAAACCTAGTTGCAATGATGGAGAGAATGAGCGGAGATCAAATTGTTCTTCAGATTTGAACAAAAGTAGCAGGAGTGAGGGTCCAGTTACTGAGTCTTGTGCACCATCTTCTGGTTTCTGGGGGAGAACTCTCGATTCTGTAGGGTCCAGTAGTGATGTCCAGGTGTCCAATTCCAGTGTAGCCAGTAATAGCAAGGTACCTGGTTTTGGGTCTTCCTTACAGTTTTCTTTCAACTTGTCTGGAAATATTGCTCCTGCCCTGCGTACGCCTGGCTCTGGGTCAAGTGGCACTATACTAGGTGATGCTTGTACAGATTGTTCAGAGCTCAACAAGTCAATTTATGGAGCTGATTTATCAGAGAAGATCAGTGGAGATGCTCCTAAGGTCAGGAACTCCCCATCCAGGAACTGTAAAGGGTCGAATAACGAGGTTAATGGATCTAGCAGTGATTTACATGCCTTAAAGTCCAGAGCAGTTAATTCTGCGCCATCCTCCTTGCCTGCTGTTCATAAATCTATTCGCACCGAAAGAGTTTCAAAAGGTACAGATGCTTTGAATTCTAGTAGAGTGCTACCCACAAGCTTGGATCGGTCCAACCATGCTGTTAATAACTGTGGCAGAACTTCAAATCTTTCAAAGTCTAGGGAAGTTGGATATCCACCCAGTGTTTCTGATTCTCGTCTTGCATCTGCTGTTGAAAGTTCTTCACTTCCATGTGTAAAAGCTGGAAAAGTTGATTTTGTTGAGGCTAGGGATGCTGTTTCATCTCAAGTTACAAATTCTTCAAATGATAGGAATGGCTTGAAAACGTCTGTGTTTAAAGTTTTTGATCAGTTTAGAGGATCTAAAACATCAAAGCACTATCCTTTGGGAGTTGGGACTGAGATTGCAGGAAAACATATTGAGAAGGAAATTTTTCCATATGAATTATTTGTCAAGATTTACAATTGGAACAAGGTGGAATTGCGCCCTTCTGGCCTTATAAATTGTGGTAACAGCTGTTATGCCAATGCGGTGCTCCAGTGCTTGGCATTCACTCCACCTCTGACTGCTTATTTGCTTCAAGGACTCCATTCTAAAGTTTGTGTAAAGAAGGAATGGTGTTTCATGTGTGAGTTTGAAAGTCTAGTTTCGAAGGCAAAGGAAGGAAAATCCCCTCTGTCTCCTATGGCAATACTTTCCCAGTTAAGAAATATTGGAAGTCAACTTGGTAATGGGAGAGAAGAAGATGCCCATGAATTTCTAAGGTATGCTATTGATATGATGCAATCTGTTTGCCTTATGGAAGCCGGGGTTAATGCTTCACGCTCTTTGAAAGAAGAAACAACTTTAATAGGCCTTACATTTGGAGGCTACCTTCGATCAAAGATAGAATGCTCAAAGTGCCAAGGAAAGTCTGAGCGGCAGGAAAGAATGATGGATCTTACTGTTGAGATTGAGGGTGATATAGGAACCTTGGAAGAGGCTCTTCGACGGTTCACCAGTACTGAGACCTTGGATGGGGAGAACAAATACCAATGTAGCAGATGCAAATCGTATGAGAAGGCCAAAAAGAAGTTGACAATACTGGAAGCTCCCAATATCCTTACCATTGCACTGAAGCGTTTTCAGTCGGGAAAATTTGGGAAGATCAATAAGCCTATTCGGTTTCCTGAGATCCTGGACTTGGCACCTTATATGAGTGGCACAAGTGATAAATCTCCAATATATAGACTCTATGGGGTGGTTGTTCACTTGGATATCATGAATGCCGCATTTTCTGGTCACTATGTGTGCTACGTTAAGAACTCCCACAACAAGTGGTTTAAGATCGATGACAGCACGGTAACAGCTGTTGAACTTGAAAACGTCTTGATGAAAGGGGCATACATGCTTCTTTATTCGAGGTGCTCGCCGAGGGCCCCGAGATTGATAAGAAACAGAATAATATCTCCTGATCCCAAACATAGAGCCATTCCTTCCTGGATTAGTGGAAAGACTACCAATTTGAAACCGAAGTCTGTCTCGCCACATTCTAGCGTTGACCCATTCTTACCCTGTTCAAATCCTCCAGAGGATACAACGAGTTCTCAGCTGAAAAGGATTTTAGAAGAGGACTCATCAAGTGACAATTCTTCCCTTATCAGCAACAACTCTGACGAAGGTTCTTGCAGTACTGATAGCACTCGTGATTCTTCGAGCGCCGATGACTTGTCCGATTATATATTTGGTGATTCAGGACGTGGTTGGAATAGCCCTTGGAGGAATTTTTCGGATTCTGACACTTCTTCCTCATCCTCTTCCTCACCCACAAGTACAAAGCATTCACCGCTCTCTGATTCAAACCGGTATGCTTCAGATGGTGCAATGACGGTTCCTTTTTTGAATTCTGACACCAGTAAACAATGTAGAAAGTTAGCAAGTAGTAGTAGTAGAAATAGGGAAACTGACTCGGAGAGATTAGGACCCGACTCTTTAAGGGATGTAAAATTTAAAAAATCAAGTAGGGAAAGAACGGTAAACATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0006464 GO:0006508 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0008283 GO:0009628 GO:0009651 GO:0009791 GO:0009908 GO:0009987 GO:0016579 GO:0016787 GO:0019538 GO:0019783 GO:0022414 GO:0022622 GO:0032501 GO:0032502 GO:0036211 GO:0036459 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0047484 GO:0048364 GO:0048366 GO:0048367 GO:0048583 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050896 GO:0061458 GO:0065007 GO:0070011 GO:0070646 GO:0070647 GO:0071704 GO:0080134 GO:0090567 GO:0099402 GO:0101005 GO:0140096 GO:1901000 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH zf-MYND

Protein Analysis

1115

Amino Acids

121.26

Weight (kDa)

8.0

Isoelectric Point (pI)

57.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007452)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24560
fragaria_vesca	FvH4_5g35500 FvH4_5g35500 FvH4_5g35500 FvH4_5g35500
malus_domestica	MD08G1196200.v1.1 MD15G1384000.v1.1
prunus_persica	Prupe.1G530100_v2.0.a1 Prupe.1G530100_v2.0.a1
pyrus_communis	pycom08g16850 pycom15g34370
rosa_chinensis	RchiOBHm_Chr7g0236881
rosa_laevigata	RLG00000001053
rosa_multiflora	Rmu_co8158526.1_g000001 Rmu_sc0002867.1_g000006 Rmu_sc0017481.1_g000004 Rmu_sc0032933.1_g000001
rosa_roxburghii	Rroxscaffold_3G00224730
rosa_rugosa	Rorug07G0300500 Rorug07G0300600
rosa_samantha	Rh7AG455400 Rh7BG426600 Rh7CG474200 Rh7DG443400
rosa_wichuraiana	Rw7G037810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1820
Acc36I	ACCTGC	1 cut(s)	478
Acc65I	GGTACC	1 cut(s)	1033
AccB1I	GGYRCC	4 cut(s)	58, 96, 1033, 2506
AccB7I	CCANNNNNTGG	2 cut(s)	947, 1864
AccBSI	CCGCTC	3 cut(s)	868, 2239, 3148
AccI	GTMKAC	1 cut(s)	741
AccII	CGCG	3 cut(s)	104, 182, 259
AciI	CCGC	9 cut(s)	182, 195, 268, 278, 868, 1850, 2239, 2589, 3146
AclWI	GGATC	8 cut(s)	24, 634, 1282, 1431, 1687, 2265, 2488, 2768
AcoI	YGGCCR	2 cut(s)	144, 396
AcuI	CTGAAG	4 cut(s)	555, 870, 2456, 3156
AcyI	GRCGYC	1 cut(s)	97
AdeI	CACNNNGTG	2 cut(s)	1502, 2608
AgeI	ACCGGT	1 cut(s)	3162
AjiI	CACGTC	1 cut(s)	3059
AjnI	CCWGG	7 cut(s)	484, 996, 1036, 1105, 1238, 2496, 2798
AjuI	GAANNNNNNNTTGG	2 cut(s)	553, 585
AloI	GAACNNNNNNTCC	2 cut(s)	1220, 1252
Alw21I	GWGCWC	4 cut(s)	940, 1164, 1857, 2729
Alw26I	GTCTC	3 cut(s)	2004, 2321, 2845
Alw44I	GTGCAC	1 cut(s)	936
AlwI	GGATC	8 cut(s)	24, 634, 1282, 1431, 1687, 2265, 2488, 2768
AlwNI	CAGNNNCTG	2 cut(s)	926, 1245
Ama87I	CYCGRG	1 cut(s)	2740
AoxI	GGCC	9 cut(s)	108, 144, 385, 396, 761, 1813, 2173, 2382, 2736
ApaI	GGGCCC	1 cut(s)	2740
ApaLI	GTGCAC	1 cut(s)	936
ApeKI	GCWGC	3 cut(s)	158, 261, 270
ArsI	GACNNNNNNTTYG	4 cut(s)	1876, 1908, 2806, 2838
AseI	ATTAAT	1 cut(s)	417
AsiGI	ACCGGT	1 cut(s)	3162
Asp700I	GAANNNNTTC	1 cut(s)	1752
Asp718I	GGTACC	1 cut(s)	1033
AspLEI	GCGC	7 cut(s)	99, 233, 261, 266, 1324, 1806, 3020
AspS9I	GGNCC	8 cut(s)	82, 557, 917, 981, 1428, 2736, 2737, 3281
AsuC2I	CCSGG	1 cut(s)	2128
AsuHPI	GGTGA	8 cut(s)	76, 389, 1148, 2291, 2308, 3059, 3114, 3135
AsuII	TTCGAA	1 cut(s)	1970
AsuNHI	GCTAGC	1 cut(s)	782
AvaI	CYCGRG	1 cut(s)	2740
AvaII	GGWCC	6 cut(s)	82, 557, 917, 981, 1428, 3281
AxyI	CCTNAGG	1 cut(s)	1218
BaeGI	GKGCMC	2 cut(s)	940, 2740
BalI	TGGCCA	2 cut(s)	146, 398
BanI	GGYRCC	4 cut(s)	58, 96, 1033, 2506
BanII	GRGCYC	2 cut(s)	1164, 2740
BarI	GAAGNNNNNNTAC	2 cut(s)	613, 645
BauI	CACGAG	2 cut(s)	35, 3003
BbsI	GAAGAC	1 cut(s)	1041
Bbv12I	GWGCWC	4 cut(s)	940, 1164, 1857, 2729
BbvI	GCAGC	3 cut(s)	145, 248, 257
BceAI	ACGGC	1 cut(s)	182
BciT130I	CCWGG	7 cut(s)	486, 998, 1038, 1107, 1240, 2498, 2800
BciVI	GTATCC	1 cut(s)	2887
BclI	TGATCA	2 cut(s)	751, 1666
BcnI	CCSGG	1 cut(s)	2128
BcoDI	GTCTC	3 cut(s)	2004, 2321, 2845
BfmI	CTRYAG	1 cut(s)	975
BfoI	RGCGCY	2 cut(s)	100, 3021
BfuAI	ACCTGC	1 cut(s)	478
BfuI	GTATCC	1 cut(s)	2887
BglI	GCCNNNNNGGC	1 cut(s)	1812
BisI	GCNGC	7 cut(s)	159, 183, 195, 262, 271, 2240, 2589
BlsI	GCNGC	7 cut(s)	160, 184, 196, 263, 272, 2241, 2590
BmcAI	AGTACT	2 cut(s)	2323, 2992
Bme1390I	CCNGG	8 cut(s)	486, 998, 1038, 1107, 1240, 2128, 2498, 2800
Bme18I	GGWCC	6 cut(s)	82, 557, 917, 981, 1428, 3281
BmeT110I	CYCGRG	1 cut(s)	2740
BmgBI	CACGTC	1 cut(s)	3059
BmgT120I	GGNCC	8 cut(s)	82, 557, 917, 981, 1428, 2736, 2737, 3281
BmrFI	CCNGG	8 cut(s)	486, 998, 1038, 1107, 1240, 2128, 2498, 2800
BmrI	ACTGGG	2 cut(s)	1494, 2014
BmtI	GCTAGC	1 cut(s)	786
BmuI	ACTGGG	2 cut(s)	1494, 2014
BpiI	GAAGAC	1 cut(s)	1041
BpmI	CTGGAG	2 cut(s)	1841, 2871
Bpu14I	TTCGAA	1 cut(s)	1970
BpuEI	CTTGAG	1 cut(s)	1590
BpuMI	CCSGG	1 cut(s)	2128
Bsa29I	ATCGAT	1 cut(s)	2649
BsaBI	GATNNNNATC	2 cut(s)	690, 2368
BsaHI	GRCGYC	1 cut(s)	97
BsaI	GGTCTC	1 cut(s)	2321
BsaJI	CCNNGG	7 cut(s)	147, 2127, 2224, 2292, 2331, 2732, 3074
BsaWI	WCCGGW	1 cut(s)	3162
BsaXI	ACNNNNNCTCC	2 cut(s)	901, 931
Bse118I	RCCGGY	2 cut(s)	61, 3162
Bse21I	CCTNAGG	1 cut(s)	1218
Bse3DI	GCAATG	4 cut(s)	473, 856, 2427, 3189
Bse8I	GATNNNNATC	2 cut(s)	690, 2368
BseBI	CCWGG	7 cut(s)	486, 998, 1038, 1107, 1240, 2498, 2800
BseCI	ATCGAT	1 cut(s)	2649
BseDI	CCNNGG	7 cut(s)	147, 2127, 2224, 2292, 2331, 2732, 3074
BseGI	GGATG	9 cut(s)	343, 640, 691, 1235, 1325, 1597, 2341, 3110, 3304
BseJI	GATNNNNATC	2 cut(s)	690, 2368
BseMI	GCAATG	4 cut(s)	473, 856, 2427, 3189
BseMII	CTCAG	8 cut(s)	159, 453, 918, 1710, 2226, 2316, 2481, 2921
BseRI	GAGGAG	1 cut(s)	134
BseSI	GKGCMC	2 cut(s)	940, 2740
BseXI	GCAGC	3 cut(s)	145, 248, 257
BseYI	CCCAGC	1 cut(s)	185
Bsh1236I	CGCG	3 cut(s)	104, 182, 259
BshFI	GGCC	9 cut(s)	110, 146, 387, 398, 763, 1815, 2175, 2384, 2738
BshNI	GGYRCC	4 cut(s)	58, 96, 1033, 2506
BshTI	ACCGGT	1 cut(s)	3162
BshVI	ATCGAT	1 cut(s)	2649
BsiHKAI	GWGCWC	4 cut(s)	940, 1164, 1857, 2729
BsiHKCI	CYCGRG	1 cut(s)	2740
BsiSI	CCGG	3 cut(s)	62, 2127, 3163
BsiWI	CGTACG	1 cut(s)	1100
BslFI	GGGAC	1 cut(s)	1729
BsmAI	GTCTC	3 cut(s)	2004, 2321, 2845
BsmFI	GGGAC	1 cut(s)	1729
BsmI	GAATGC	5 cut(s)	344, 1868, 2216, 2590, 3139
BsnI	GGCC	9 cut(s)	110, 146, 387, 398, 763, 1815, 2175, 2384, 2738
Bso31I	GGTCTC	1 cut(s)	2321
BsoBI	CYCGRG	1 cut(s)	2740
Bsp119I	TTCGAA	1 cut(s)	1970
Bsp120I	GGGCCC	1 cut(s)	2736
Bsp1286I	GDGCHC	5 cut(s)	940, 1164, 1857, 2729, 2740
Bsp1407I	TGTACA	1 cut(s)	1145
Bsp68I	TCGCGA	1 cut(s)	104
BspACI	CCGC	9 cut(s)	182, 195, 268, 278, 868, 1850, 2239, 2589, 3146
BspANI	GGCC	9 cut(s)	110, 146, 387, 398, 763, 1815, 2175, 2384, 2738
BspCNI	CTCAG	8 cut(s)	160, 454, 919, 1711, 2227, 2317, 2482, 2920
BspDI	ATCGAT	1 cut(s)	2649
BspFNI	CGCG	3 cut(s)	104, 182, 259
BspHI	TCATGA	1 cut(s)	2580
BspMI	ACCTGC	1 cut(s)	478
BspOI	GCTAGC	1 cut(s)	786
BspPI	GGATC	8 cut(s)	24, 634, 1282, 1431, 1687, 2265, 2488, 2768
BspQI	GCTCTTC	1 cut(s)	2310
BspT104I	TTCGAA	1 cut(s)	1970
BspT107I	GGYRCC	4 cut(s)	58, 96, 1033, 2506
BspTNI	GGTCTC	1 cut(s)	2321
BsrBI	CCGCTC	3 cut(s)	868, 2239, 3148
BsrDI	GCAATG	4 cut(s)	473, 856, 2427, 3189
BsrFI	RCCGGY	2 cut(s)	61, 3162
BsrGI	TGTACA	1 cut(s)	1145
BssAI	RCCGGY	2 cut(s)	61, 3162
BssECI	CCNNGG	7 cut(s)	147, 2127, 2224, 2292, 2331, 2732, 3074
BssNI	GRCGYC	1 cut(s)	97
BssSI	CACGAG	2 cut(s)	35, 3003
BssT1I	CCWWGG	5 cut(s)	147, 2224, 2292, 2331, 3074
Bst2BI	CACGAG	2 cut(s)	35, 3003
Bst2UI	CCWGG	7 cut(s)	486, 998, 1038, 1107, 1240, 2498, 2800
Bst4CI	ACNGT	9 cut(s)	290, 1059, 1247, 1451, 2266, 2313, 2662, 3190, 3334
Bst6I	CTCTTC	4 cut(s)	2292, 2310, 2922, 3121
BstACI	GRCGYC	1 cut(s)	97
BstAUI	TGTACA	1 cut(s)	1145
BstBI	TTCGAA	1 cut(s)	1970
BstC8I	GCNNGC	6 cut(s)	268, 385, 616, 784, 1338, 2729
BstENI	CCTNNNNNAGG	1 cut(s)	104
BstF5I	GGATG	9 cut(s)	343, 640, 691, 1235, 1325, 1597, 2341, 3110, 3304
BstFNI	CGCG	3 cut(s)	104, 182, 259
BstH2I	RGCGCY	2 cut(s)	100, 3021
BstHHI	GCGC	7 cut(s)	99, 233, 261, 266, 1324, 1806, 3020
BstMAI	GTCTC	3 cut(s)	2004, 2321, 2845
BstMWI	GCNNNNNNNGC	9 cut(s)	164, 191, 267, 270, 707, 1592, 1812, 2220, 3145
BstNI	CCWGG	7 cut(s)	486, 998, 1038, 1107, 1240, 2498, 2800
BstNSI	RCATGY	4 cut(s)	8, 721, 1295, 2710
BstSCI	CCNGG	8 cut(s)	484, 996, 1036, 1105, 1238, 2126, 2496, 2798
BstSFI	CTRYAG	1 cut(s)	975
BstSLI	GKGCMC	2 cut(s)	940, 2740
BstUI	CGCG	3 cut(s)	104, 182, 259
BstV1I	GCAGC	3 cut(s)	145, 248, 257
BstV2I	GAAGAC	1 cut(s)	1041
BstX2I	RGATCY	6 cut(s)	16, 626, 1274, 1679, 2257, 2493
BstXI	CCANNNNNNTGG	1 cut(s)	1420
BstYI	RGATCY	6 cut(s)	16, 626, 1274, 1679, 2257, 2493
Bsu15I	ATCGAT	1 cut(s)	2649
Bsu36I	CCTNAGG	1 cut(s)	1218
BsuI	GTATCC	1 cut(s)	2887
BsuRI	GGCC	9 cut(s)	110, 146, 387, 398, 763, 1815, 2175, 2384, 2738
BsuTUI	ATCGAT	1 cut(s)	2649
BtrI	CACGTC	1 cut(s)	3059
BtsCI	GGATG	9 cut(s)	343, 640, 691, 1235, 1325, 1597, 2341, 3110, 3304
BtsI	GCAGTG	1 cut(s)	1288
BtsIMutI	CAGTG	8 cut(s)	313, 655, 1018, 1210, 1288, 1507, 1865, 2432
BtuMI	TCGCGA	1 cut(s)	104
BveI	ACCTGC	1 cut(s)	478
Cac8I	GCNNGC	6 cut(s)	268, 385, 616, 784, 1338, 2729
CaiI	CAGNNNCTG	2 cut(s)	926, 1245
CciI	TCATGA	1 cut(s)	2580
CfoI	GCGC	7 cut(s)	99, 233, 261, 266, 1324, 1806, 3020
Cfr10I	RCCGGY	2 cut(s)	61, 3162
Cfr13I	GGNCC	8 cut(s)	82, 557, 917, 981, 1428, 2736, 2737, 3281
ClaI	ATCGAT	1 cut(s)	2649
CsiI	ACCWGGT	1 cut(s)	1036
CspAI	ACCGGT	1 cut(s)	3162
DinI	GGCGCC	1 cut(s)	98
DraI	TTTAAA	2 cut(s)	1657, 3310
DraIII	CACNNNGTG	2 cut(s)	1502, 2608
EaeI	YGGCCR	2 cut(s)	144, 396
Eam1104I	CTCTTC	4 cut(s)	2292, 2310, 2922, 3121
EarI	CTCTTC	4 cut(s)	2292, 2310, 2922, 3121
Ecl136II	GAGCTC	1 cut(s)	1162
Eco130I	CCWWGG	5 cut(s)	147, 2224, 2292, 2331, 3074
Eco147I	AGGCCT	1 cut(s)	2175
Eco24I	GRGCYC	2 cut(s)	1164, 2740
Eco31I	GGTCTC	1 cut(s)	2321
Eco32I	GATATC	2 cut(s)	1493, 2578
Eco47I	GGWCC	6 cut(s)	82, 557, 917, 981, 1428, 3281
Eco53kI	GAGCTC	1 cut(s)	1162
Eco57I	CTGAAG	4 cut(s)	555, 870, 2456, 3156
Eco81I	CCTNAGG	1 cut(s)	1218
Eco88I	CYCGRG	1 cut(s)	2740
EcoICRI	GAGCTC	1 cut(s)	1162
EcoNI	CCTNNNNNAGG	1 cut(s)	104
EcoO109I	RGGNCCY	3 cut(s)	2736, 2737, 3281
EcoRI	GAATTC	2 cut(s)	1393, 3202
EcoRII	CCWGG	7 cut(s)	484, 996, 1036, 1105, 1238, 2496, 2798
EcoRV	GATATC	2 cut(s)	1493, 2578
EcoT14I	CCWWGG	5 cut(s)	147, 2224, 2292, 2331, 3074
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	2 cut(s)	1164, 2740
EgeI	GGCGCC	1 cut(s)	98
EheI	GGCGCC	1 cut(s)	98
ErhI	CCWWGG	5 cut(s)	147, 2224, 2292, 2331, 3074
FalI	AAGNNNNNCTT	2 cut(s)	2289, 2321
FaqI	GGGAC	1 cut(s)	1729
FauI	CCCGC	1 cut(s)	275
FauNDI	CATATG	1 cut(s)	1759
FbaI	TGATCA	2 cut(s)	751, 1666
FblI	GTMKAC	1 cut(s)	741
Fnu4HI	GCNGC	7 cut(s)	159, 183, 195, 262, 271, 2240, 2589
FokI	GGATG	9 cut(s)	330, 647, 678, 1222, 1312, 1604, 2348, 3097, 3311
FriOI	GRGCYC	2 cut(s)	1164, 2740
Fsp4HI	GCNGC	7 cut(s)	159, 183, 195, 262, 271, 2240, 2589
GlaI	GCGC	7 cut(s)	98, 232, 260, 265, 1323, 1805, 3019
GluI	GCNGC	7 cut(s)	159, 183, 195, 262, 271, 2240, 2589
GsaI	CCCAGC	1 cut(s)	189
GsuI	CTGGAG	2 cut(s)	1841, 2871
HaeII	RGCGCY	2 cut(s)	100, 3021
HaeIII	GGCC	9 cut(s)	110, 146, 387, 398, 763, 1815, 2175, 2384, 2738
HapII	CCGG	3 cut(s)	62, 2127, 3163
HhaI	GCGC	7 cut(s)	99, 233, 261, 266, 1324, 1806, 3020
Hin1I	GRCGYC	1 cut(s)	97
Hin6I	GCGC	7 cut(s)	97, 231, 259, 264, 1322, 1804, 3018
HinP1I	GCGC	7 cut(s)	97, 231, 259, 264, 1322, 1804, 3018
HincII	GTYRAC	4 cut(s)	742, 2042, 2397, 2860
HindII	GTYRAC	4 cut(s)	742, 2042, 2397, 2860
HindIII	AAGCTT	1 cut(s)	1417
HpaII	CCGG	3 cut(s)	62, 2127, 3163
HphI	GGTGA	8 cut(s)	76, 389, 1148, 2291, 2308, 3059, 3114, 3135
Hpy166II	GTNNAC	9 cut(s)	742, 938, 2042, 2316, 2397, 2569, 2860, 3218, 3337
Hpy8I	GTNNAC	9 cut(s)	742, 938, 2042, 2316, 2397, 2569, 2860, 3218, 3337
Hpy99I	CGWCG	1 cut(s)	2313
HpyCH4III	ACNGT	9 cut(s)	290, 1059, 1247, 1451, 2266, 2313, 2662, 3190, 3334
HpyCH4IV	ACGT	5 cut(s)	393, 1646, 2616, 2685, 3058
HpyF10VI	GCNNNNNNNGC	9 cut(s)	164, 191, 267, 270, 707, 1592, 1812, 2220, 3145
HpySE526I	ACGT	5 cut(s)	393, 1646, 2616, 2685, 3058
Hsp92I	GRCGYC	1 cut(s)	97
HspAI	GCGC	7 cut(s)	97, 231, 259, 264, 1322, 1804, 3018
KasI	GGCGCC	1 cut(s)	96
KpnI	GGTACC	1 cut(s)	1037
Ksp22I	TGATCA	2 cut(s)	751, 1666
LguI	GCTCTTC	1 cut(s)	2310
LmnI	GCTCC	6 cut(s)	30, 1093, 1181, 1219, 1860, 2416
Lsp1109I	GCAGC	3 cut(s)	145, 248, 257
MabI	ACCWGGT	1 cut(s)	1036
MaeII	ACGT	5 cut(s)	393, 1646, 2616, 2685, 3058
MaeIII	GTNAC	8 cut(s)	239, 326, 922, 1609, 1829, 2600, 2662, 2942
MbiI	CCGCTC	3 cut(s)	868, 2239, 3148
MfeI	CAATTG	1 cut(s)	1783
MflI	RGATCY	6 cut(s)	16, 626, 1274, 1679, 2257, 2493
MhlI	GDGCHC	5 cut(s)	940, 1164, 1857, 2729, 2740
MlsI	TGGCCA	2 cut(s)	146, 398
MluNI	TGGCCA	2 cut(s)	146, 398
Mly113I	GGCGCC	1 cut(s)	97
MlyI	GAGTC	6 cut(s)	938, 1899, 2544, 2927, 3260, 3281
MmeI	TCCRAC	3 cut(s)	1455, 1468, 3044
Mox20I	TGGCCA	2 cut(s)	146, 398
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	1 cut(s)	1752
MscI	TGGCCA	2 cut(s)	146, 398
MslI	CAYNNNNRTG	1 cut(s)	1549
Msp20I	TGGCCA	2 cut(s)	146, 398
MspA1I	CMGCKG	5 cut(s)	270, 618, 1836, 2669, 2911
MspI	CCGG	3 cut(s)	62, 2127, 3163
MspR9I	CCNGG	8 cut(s)	486, 998, 1038, 1107, 1240, 2128, 2498, 2800
MteI	GCGCNGCGC	1 cut(s)	262
MunI	CAATTG	1 cut(s)	1783
Mva1269I	GAATGC	5 cut(s)	344, 1868, 2216, 2590, 3139
MvaI	CCWGG	7 cut(s)	486, 998, 1038, 1107, 1240, 2498, 2800
MvnI	CGCG	3 cut(s)	104, 182, 259
MwoI	GCNNNNNNNGC	9 cut(s)	164, 191, 267, 270, 707, 1592, 1812, 2220, 3145
NarI	GGCGCC	1 cut(s)	97
NciI	CCSGG	1 cut(s)	2128
NdeI	CATATG	1 cut(s)	1759
NheI	GCTAGC	1 cut(s)	782
NmeAIII	GCCGAG	1 cut(s)	2757
NmuCI	GTSAC	3 cut(s)	326, 2600, 2942
NruI	TCGCGA	1 cut(s)	104
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	4 cut(s)	8, 721, 1295, 2710
NspV	TTCGAA	1 cut(s)	1970
PagI	TCATGA	1 cut(s)	2580
PceI	AGGCCT	1 cut(s)	2175
PciSI	GCTCTTC	1 cut(s)	2310
PcsI	WCGNNNNNNNCGW	1 cut(s)	75
PctI	GAATGC	5 cut(s)	344, 1868, 2216, 2590, 3139
PdmI	GAANNNNTTC	1 cut(s)	1752
Pfl23II	CGTACG	1 cut(s)	1100
PflFI	GACNNNGTC	1 cut(s)	324
PflMI	CCANNNNNTGG	2 cut(s)	947, 1864
PfoI	TCCNGGA	3 cut(s)	1238, 2496, 2798
PinAI	ACCGGT	1 cut(s)	3162
PkrI	GCNGC	7 cut(s)	160, 184, 196, 263, 272, 2241, 2590
PleI	GAGTC	6 cut(s)	937, 1899, 2544, 2927, 3260, 3281
PluTI	GGCGCC	1 cut(s)	100
PpsI	GAGTC	6 cut(s)	937, 1899, 2544, 2927, 3260, 3281
PpuMI	RGGWCCY	1 cut(s)	3281
PshBI	ATTAAT	1 cut(s)	417
PsiI	TTATAA	1 cut(s)	1820
Psp124BI	GAGCTC	1 cut(s)	1164
Psp5II	RGGWCCY	1 cut(s)	3281
Psp6I	CCWGG	7 cut(s)	484, 996, 1036, 1105, 1238, 2496, 2798
PspFI	CCCAGC	1 cut(s)	185
PspGI	CCWGG	7 cut(s)	484, 996, 1036, 1105, 1238, 2496, 2798
PspLI	CGTACG	1 cut(s)	1100
PspOMI	GGGCCC	1 cut(s)	2736
PspPI	GGNCC	8 cut(s)	82, 557, 917, 981, 1428, 2736, 2737, 3281
PspPPI	RGGWCCY	1 cut(s)	3281
PsrI	GAACNNNNNNTAC	2 cut(s)	1138, 1170
PstNI	CAGNNNCTG	2 cut(s)	926, 1245
PsuI	RGATCY	6 cut(s)	16, 626, 1274, 1679, 2257, 2493
PsyI	GACNNNGTC	1 cut(s)	324
PvuII	CAGCTG	4 cut(s)	618, 1836, 2669, 2911
RruI	TCGCGA	1 cut(s)	104
RseI	CAYNNNNRTG	1 cut(s)	1549
SacI	GAGCTC	1 cut(s)	1164
SalI	GTCGAC	1 cut(s)	740
SapI	GCTCTTC	1 cut(s)	2310
SatI	GCNGC	7 cut(s)	159, 183, 195, 262, 271, 2240, 2589
Sau96I	GGNCC	8 cut(s)	82, 557, 917, 981, 1428, 2736, 2737, 3281
ScaI	AGTACT	2 cut(s)	2323, 2992
SchI	GAGTC	6 cut(s)	938, 1899, 2544, 2927, 3260, 3281
ScrFI	CCNGG	8 cut(s)	486, 998, 1038, 1107, 1240, 2128, 2498, 2800
SduI	GDGCHC	5 cut(s)	940, 1164, 1857, 2729, 2740
SexAI	ACCWGGT	1 cut(s)	1036
SfcI	CTRYAG	1 cut(s)	975
SfoI	GGCGCC	1 cut(s)	98
SfuI	TTCGAA	1 cut(s)	1970
SinI	GGWCC	6 cut(s)	82, 557, 917, 981, 1428, 3281
SmiMI	CAYNNNNRTG	1 cut(s)	1549
SmlI	CTYRAG	1 cut(s)	1605
SmoI	CTYRAG	1 cut(s)	1605
SseBI	AGGCCT	1 cut(s)	2175
SsiI	CCGC	9 cut(s)	182, 195, 268, 278, 868, 1850, 2239, 2589, 3146
SspDI	GGCGCC	1 cut(s)	96
SspI	AATATT	2 cut(s)	1084, 2032
SstI	GAGCTC	1 cut(s)	1164
StuI	AGGCCT	1 cut(s)	2175
StyD4I	CCNGG	8 cut(s)	484, 996, 1036, 1105, 1238, 2126, 2496, 2798
StyI	CCWWGG	5 cut(s)	147, 2224, 2292, 2331, 3074
TaaI	ACNGT	9 cut(s)	290, 1059, 1247, 1451, 2266, 2313, 2662, 3190, 3334
TaiI	ACGT	5 cut(s)	396, 1649, 2619, 2688, 3061
TaqI	TCGA	9 cut(s)	741, 969, 1256, 1970, 2197, 2308, 2649, 2720, 3014
TaqII	GACCGA	1 cut(s)	1416
TatI	WGTACW	5 cut(s)	620, 1145, 2321, 2990, 3131
TauI	GCSGC	4 cut(s)	185, 197, 2242, 2591
TscAI	CASTG	8 cut(s)	320, 655, 1018, 1210, 1288, 1507, 1865, 2439
TseFI	GTSAC	3 cut(s)	326, 2600, 2942
TseI	GCWGC	3 cut(s)	158, 261, 270
Tsp45I	GTSAC	3 cut(s)	326, 2600, 2942
TspDTI	ATGAA	9 cut(s)	549, 654, 1334, 1590, 1776, 1933, 2088, 2597, 2708
TspGWI	ACGGA	1 cut(s)	131
TspRI	CASTG	8 cut(s)	320, 655, 1018, 1210, 1288, 1507, 1865, 2439
Tth111I	GACNNNGTC	1 cut(s)	324
Van91I	CCANNNNNTGG	2 cut(s)	947, 1864
VneI	GTGCAC	1 cut(s)	936
VpaK11BI	GGWCC	6 cut(s)	82, 557, 917, 981, 1428, 3281
VspI	ATTAAT	1 cut(s)	417
XagI	CCTNNNNNAGG	1 cut(s)	104
XceI	RCATGY	4 cut(s)	8, 721, 1295, 2710
XmiI	GTMKAC	1 cut(s)	741
XmnI	GAANNNNTTC	1 cut(s)	1752
ZrmI	AGTACT	2 cut(s)	2323, 2992
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.