ubiquitin carboxyl-terminal hydrolase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G24560 |
| fragaria_vesca | FvH4_5g35500 FvH4_5g35500 FvH4_5g35500 FvH4_5g35500 |
| malus_domestica | MD08G1196200.v1.1 MD15G1384000.v1.1 |
| prunus_persica | Prupe.1G530100_v2.0.a1 Prupe.1G530100_v2.0.a1 |
| pyrus_communis | pycom08g16850 pycom15g34370 |
| rosa_chinensis | RchiOBHm_Chr7g0236881 |
| rosa_laevigata | RLG00000001053 |
| rosa_multiflora | Rmu_co8158526.1_g000001 Rmu_sc0002867.1_g000006 Rmu_sc0017481.1_g000004 Rmu_sc0032933.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00224730 |
| rosa_rugosa | Rorug07G0300500 Rorug07G0300600 |
| rosa_samantha | Rh7AG455400 Rh7BG426600 Rh7CG474200 Rh7DG443400 |
| rosa_wichuraiana | Rw7G037810 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1799 |
| AatII | GACGTC | 1 cut(s) | 198 |
| Acc36I | ACCTGC | 2 cut(s) | 484, 3183 |
| AccB1I | GGYRCC | 2 cut(s) | 2199, 2485 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1843 |
| AccBSI | CCGCTC | 3 cut(s) | 2218, 2934, 3112 |
| AccI | GTMKAC | 2 cut(s) | 1095, 3172 |
| AccII | CGCG | 3 cut(s) | 99, 107, 2122 |
| AclWI | GGATC | 8 cut(s) | 24, 589, 640, 1035, 1048, 2244, 2732, 2774 |
| AcoI | YGGCCR | 2 cut(s) | 108, 2929 |
| AcuI | CTGAAG | 5 cut(s) | 416, 621, 1128, 1276, 1862 |
| AcyI | GRCGYC | 2 cut(s) | 195, 2486 |
| AdeI | CACNNNGTG | 1 cut(s) | 2199 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 61, 68, 274, 491, 505, 1843, 2278 |
| AgeI | ACCGGT | 1 cut(s) | 3126 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1102 |
| AhlI | ACTAGT | 1 cut(s) | 1190 |
| AjiI | CACGTC | 1 cut(s) | 3023 |
| AjnI | CCWGG | 3 cut(s) | 33, 490, 2271 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1208, 1240 |
| Alw21I | GWGCWC | 3 cut(s) | 961, 1731, 2827 |
| Alw26I | GTCTC | 4 cut(s) | 848, 1164, 1974, 1983 |
| AlwI | GGATC | 8 cut(s) | 24, 589, 640, 1035, 1048, 2244, 2732, 2774 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3059 |
| Ama87I | CYCGRG | 1 cut(s) | 503 |
| ApaI | GGGCCC | 1 cut(s) | 1152 |
| ApeKI | GCWGC | 8 cut(s) | 58, 158, 270, 727, 1815, 3282, 3285, 3288 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 84, 116, 1855, 1887 |
| AseI | ATTAAT | 1 cut(s) | 2711 |
| AsiGI | ACCGGT | 1 cut(s) | 3126 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1993, 3049 |
| AspLEI | GCGC | 4 cut(s) | 99, 233, 697, 2488 |
| AspS9I | GGNCC | 6 cut(s) | 911, 1148, 1149, 1262, 1658, 3224 |
| AsuII | TTCGAA | 1 cut(s) | 3098 |
| AsuNHI | GCTAGC | 1 cut(s) | 788 |
| AvaI | CYCGRG | 1 cut(s) | 503 |
| AvaII | GGWCC | 4 cut(s) | 911, 1262, 1658, 3224 |
| BaeGI | GKGCMC | 2 cut(s) | 268, 1152 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 354, 387 |
| BamHI | GGATCC | 1 cut(s) | 1040 |
| BanI | GGYRCC | 2 cut(s) | 2199, 2485 |
| BanII | GRGCYC | 3 cut(s) | 961, 1152, 1731 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 619, 651, 922, 954 |
| BauI | CACGAG | 1 cut(s) | 901 |
| BbsI | GAAGAC | 1 cut(s) | 1193 |
| Bbv12I | GWGCWC | 3 cut(s) | 961, 1731, 2827 |
| BbvI | GCAGC | 8 cut(s) | 45, 145, 257, 714, 1802, 3294, 3297, 3300 |
| BceAI | ACGGC | 2 cut(s) | 218, 263 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 458, 492 |
| BciT130I | CCWGG | 3 cut(s) | 35, 492, 2273 |
| BclI | TGATCA | 2 cut(s) | 988, 1330 |
| BcoDI | GTCTC | 4 cut(s) | 848, 1164, 1974, 1983 |
| BcuI | ACTAGT | 1 cut(s) | 1190 |
| BfmI | CTRYAG | 3 cut(s) | 477, 728, 1435 |
| BfoI | RGCGCY | 1 cut(s) | 2489 |
| BfuAI | ACCTGC | 2 cut(s) | 484, 3183 |
| BmcAI | AGTACT | 2 cut(s) | 2956, 3327 |
| Bme1390I | CCNGG | 3 cut(s) | 35, 492, 2273 |
| Bme18I | GGWCC | 4 cut(s) | 911, 1262, 1658, 3224 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1102 |
| BmeT110I | CYCGRG | 1 cut(s) | 503 |
| BmgBI | CACGTC | 1 cut(s) | 3023 |
| BmgT120I | GGNCC | 6 cut(s) | 911, 1148, 1149, 1262, 1658, 3224 |
| BmrFI | CCNGG | 3 cut(s) | 35, 492, 2273 |
| BmrI | ACTGGG | 1 cut(s) | 1993 |
| BmtI | GCTAGC | 1 cut(s) | 792 |
| BmuI | ACTGGG | 1 cut(s) | 1993 |
| BpiI | GAAGAC | 1 cut(s) | 1193 |
| BpmI | CTGGAG | 2 cut(s) | 767, 2832 |
| Bpu14I | TTCGAA | 1 cut(s) | 3098 |
| BpuEI | CTTGAG | 1 cut(s) | 3112 |
| Bsa29I | ATCGAT | 1 cut(s) | 756 |
| BsaBI | GATNNNNATC | 2 cut(s) | 543, 2347 |
| BsaHI | GRCGYC | 2 cut(s) | 195, 2486 |
| BsaJI | CCNNGG | 6 cut(s) | 105, 468, 504, 2203, 2271, 3038 |
| BsaWI | WCCGGW | 3 cut(s) | 282, 998, 3126 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 556, 586 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 61, 68, 274, 491, 505, 1843, 2278 |
| Bse118I | RCCGGY | 2 cut(s) | 61, 3126 |
| Bse1I | ACTGG | 9 cut(s) | 190, 320, 1618, 1999, 2302, 2388, 2862, 3160, 3270 |
| Bse3DI | GCAATG | 1 cut(s) | 2873 |
| Bse8I | GATNNNNATC | 2 cut(s) | 543, 2347 |
| BseBI | CCWGG | 3 cut(s) | 35, 492, 2273 |
| BseCI | ATCGAT | 1 cut(s) | 756 |
| BseDI | CCNNGG | 6 cut(s) | 105, 468, 504, 2203, 2271, 3038 |
| BseJI | GATNNNNATC | 2 cut(s) | 543, 2347 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 61, 68, 274, 491, 505, 1843, 2278 |
| BseMI | GCAATG | 1 cut(s) | 2873 |
| BseNI | ACTGG | 9 cut(s) | 190, 320, 1618, 1999, 2302, 2388, 2862, 3160, 3270 |
| BseRI | GAGGAG | 2 cut(s) | 1309, 1510 |
| BseSI | GKGCMC | 2 cut(s) | 268, 1152 |
| BseX3I | CGGCCG | 1 cut(s) | 2929 |
| BseXI | GCAGC | 8 cut(s) | 45, 145, 257, 714, 1802, 3294, 3297, 3300 |
| BseYI | CCCAGC | 2 cut(s) | 1083, 2105 |
| BsgI | GTGCAG | 1 cut(s) | 333 |
| Bsh1236I | CGCG | 3 cut(s) | 99, 107, 2122 |
| Bsh1285I | CGRYCG | 2 cut(s) | 2180, 2932 |
| BshNI | GGYRCC | 2 cut(s) | 2199, 2485 |
| BshTI | ACCGGT | 1 cut(s) | 3126 |
| BshVI | ATCGAT | 1 cut(s) | 756 |
| BsiEI | CGRYCG | 2 cut(s) | 2180, 2932 |
| BsiHKAI | GWGCWC | 3 cut(s) | 961, 1731, 2827 |
| BsiHKCI | CYCGRG | 1 cut(s) | 503 |
| BsiSI | CCGG | 4 cut(s) | 62, 283, 999, 3127 |
| BslFI | GGGAC | 1 cut(s) | 1896 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 61, 68, 274, 491, 505, 1843, 2278 |
| BsmAI | GTCTC | 4 cut(s) | 848, 1164, 1974, 1983 |
| BsmFI | GGGAC | 1 cut(s) | 1896 |
| BsmI | GAATGC | 2 cut(s) | 1378, 2569 |
| BsoBI | CYCGRG | 1 cut(s) | 503 |
| Bsp119I | TTCGAA | 1 cut(s) | 3098 |
| Bsp120I | GGGCCC | 1 cut(s) | 1148 |
| Bsp1286I | GDGCHC | 5 cut(s) | 268, 961, 1152, 1731, 2827 |
| Bsp1407I | TGTACA | 1 cut(s) | 929 |
| BspDI | ATCGAT | 1 cut(s) | 756 |
| BspFNI | CGCG | 3 cut(s) | 99, 107, 2122 |
| BspHI | TCATGA | 1 cut(s) | 2050 |
| BspMAI | CTGCAG | 3 cut(s) | 481, 732, 1439 |
| BspMI | ACCTGC | 2 cut(s) | 484, 3183 |
| BspOI | GCTAGC | 1 cut(s) | 792 |
| BspPI | GGATC | 8 cut(s) | 24, 589, 640, 1035, 1048, 2244, 2732, 2774 |
| BspQI | GCTCTTC | 3 cut(s) | 949, 1137, 2289 |
| BspT104I | TTCGAA | 1 cut(s) | 3098 |
| BspT107I | GGYRCC | 2 cut(s) | 2199, 2485 |
| BsrBI | CCGCTC | 3 cut(s) | 2218, 2934, 3112 |
| BsrDI | GCAATG | 1 cut(s) | 2873 |
| BsrFI | RCCGGY | 2 cut(s) | 61, 3126 |
| BsrGI | TGTACA | 1 cut(s) | 929 |
| BsrI | ACTGG | 9 cut(s) | 190, 320, 1618, 1999, 2302, 2388, 2862, 3160, 3270 |
| BssAI | RCCGGY | 2 cut(s) | 61, 3126 |
| BssECI | CCNNGG | 6 cut(s) | 105, 468, 504, 2203, 2271, 3038 |
| BssNI | GRCGYC | 2 cut(s) | 195, 2486 |
| BssSI | CACGAG | 1 cut(s) | 901 |
| BssT1I | CCWWGG | 2 cut(s) | 2203, 3038 |
| Bst2BI | CACGAG | 1 cut(s) | 901 |
| Bst2UI | CCWGG | 3 cut(s) | 35, 492, 2273 |
| Bst6I | CTCTTC | 8 cut(s) | 209, 949, 1137, 1327, 2271, 2289, 2886, 3085 |
| BstACI | GRCGYC | 2 cut(s) | 195, 2486 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2199 |
| BstAUI | TGTACA | 1 cut(s) | 929 |
| BstBI | TTCGAA | 1 cut(s) | 3098 |
| BstC8I | GCNNGC | 8 cut(s) | 45, 49, 85, 268, 344, 348, 352, 790 |
| BstDSI | CCRYGG | 1 cut(s) | 105 |
| BstEII | GGTNACC | 1 cut(s) | 400 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2276 |
| BstFNI | CGCG | 3 cut(s) | 99, 107, 2122 |
| BstH2I | RGCGCY | 1 cut(s) | 2489 |
| BstHHI | GCGC | 4 cut(s) | 99, 233, 697, 2488 |
| BstMAI | GTCTC | 4 cut(s) | 848, 1164, 1974, 1983 |
| BstMCI | CGRYCG | 2 cut(s) | 2180, 2932 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 164, 237, 267, 1499, 2199, 3109, 3288 |
| BstNI | CCWGG | 3 cut(s) | 35, 492, 2273 |
| BstNSI | RCATGY | 5 cut(s) | 8, 727, 1283, 1718, 2688 |
| BstPI | GGTNACC | 1 cut(s) | 400 |
| BstSCI | CCNGG | 3 cut(s) | 33, 490, 2271 |
| BstSFI | CTRYAG | 3 cut(s) | 477, 728, 1435 |
| BstSLI | GKGCMC | 2 cut(s) | 268, 1152 |
| BstUI | CGCG | 3 cut(s) | 99, 107, 2122 |
| BstV1I | GCAGC | 8 cut(s) | 45, 145, 257, 714, 1802, 3294, 3297, 3300 |
| BstV2I | GAAGAC | 1 cut(s) | 1193 |
| BstX2I | RGATCY | 4 cut(s) | 16, 632, 1040, 2236 |
| BstYI | RGATCY | 4 cut(s) | 16, 632, 1040, 2236 |
| BstZI | CGGCCG | 1 cut(s) | 2929 |
| Bsu15I | ATCGAT | 1 cut(s) | 756 |
| BsuTUI | ATCGAT | 1 cut(s) | 756 |
| BtgI | CCRYGG | 1 cut(s) | 105 |
| BtrI | CACGTC | 1 cut(s) | 3023 |
| BtsI | GCAGTG | 1 cut(s) | 1071 |
| BveI | ACCTGC | 2 cut(s) | 484, 3183 |
| Cac8I | GCNNGC | 8 cut(s) | 45, 49, 85, 268, 344, 348, 352, 790 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3059 |
| CciI | TCATGA | 1 cut(s) | 2050 |
| CciNI | GCGGCCGC | 1 cut(s) | 2929 |
| CfoI | GCGC | 4 cut(s) | 99, 233, 697, 2488 |
| Cfr10I | RCCGGY | 2 cut(s) | 61, 3126 |
| Cfr13I | GGNCC | 6 cut(s) | 911, 1148, 1149, 1262, 1658, 3224 |
| Cfr42I | CCGCGG | 1 cut(s) | 108 |
| ClaI | ATCGAT | 1 cut(s) | 756 |
| CseI | GACGC | 1 cut(s) | 88 |
| CspAI | ACCGGT | 1 cut(s) | 3126 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 3202, 3237 |
| DinI | GGCGCC | 1 cut(s) | 2487 |
| DraI | TTTAAA | 1 cut(s) | 1636 |
| DraIII | CACNNNGTG | 1 cut(s) | 2199 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1102 |
| EaeI | YGGCCR | 2 cut(s) | 108, 2929 |
| EagI | CGGCCG | 1 cut(s) | 2929 |
| Eam1104I | CTCTTC | 8 cut(s) | 209, 949, 1137, 1327, 2271, 2289, 2886, 3085 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1102 |
| EarI | CTCTTC | 8 cut(s) | 209, 949, 1137, 1327, 2271, 2289, 2886, 3085 |
| EciI | GGCGGA | 2 cut(s) | 1845, 2859 |
| Ecl136II | GAGCTC | 2 cut(s) | 959, 1729 |
| EclXI | CGGCCG | 1 cut(s) | 2929 |
| Eco130I | CCWWGG | 2 cut(s) | 2203, 3038 |
| Eco147I | AGGCCT | 2 cut(s) | 393, 2154 |
| Eco24I | GRGCYC | 3 cut(s) | 961, 1152, 1731 |
| Eco32I | GATATC | 1 cut(s) | 867 |
| Eco47I | GGWCC | 4 cut(s) | 911, 1262, 1658, 3224 |
| Eco52I | CGGCCG | 1 cut(s) | 2929 |
| Eco53kI | GAGCTC | 2 cut(s) | 959, 1729 |
| Eco57I | CTGAAG | 5 cut(s) | 416, 621, 1128, 1276, 1862 |
| Eco88I | CYCGRG | 1 cut(s) | 503 |
| Eco91I | GGTNACC | 1 cut(s) | 400 |
| EcoICRI | GAGCTC | 2 cut(s) | 959, 1729 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2276 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1148, 1658 |
| EcoO65I | GGTNACC | 1 cut(s) | 400 |
| EcoRI | GAATTC | 2 cut(s) | 2854, 3235 |
| EcoRII | CCWGG | 3 cut(s) | 33, 490, 2271 |
| EcoRV | GATATC | 1 cut(s) | 867 |
| EcoT14I | CCWWGG | 2 cut(s) | 2203, 3038 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| EcoT38I | GRGCYC | 3 cut(s) | 961, 1152, 1731 |
| EgeI | GGCGCC | 1 cut(s) | 2487 |
| EheI | GGCGCC | 1 cut(s) | 2487 |
| ErhI | CCWWGG | 2 cut(s) | 2203, 3038 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1715, 1747, 2268, 2300 |
| FaqI | GGGAC | 1 cut(s) | 1896 |
| FauI | CCCGC | 2 cut(s) | 266, 275 |
| FbaI | TGATCA | 2 cut(s) | 988, 1330 |
| FblI | GTMKAC | 2 cut(s) | 1095, 3172 |
| FriOI | GRGCYC | 3 cut(s) | 961, 1152, 1731 |
| GlaI | GCGC | 4 cut(s) | 98, 232, 696, 2487 |
| GsaI | CCCAGC | 2 cut(s) | 1087, 2109 |
| GsuI | CTGGAG | 2 cut(s) | 767, 2832 |
| HaeII | RGCGCY | 1 cut(s) | 2489 |
| HapII | CCGG | 4 cut(s) | 62, 283, 999, 3127 |
| HgaI | GACGC | 1 cut(s) | 88 |
| HhaI | GCGC | 4 cut(s) | 99, 233, 697, 2488 |
| Hin1I | GRCGYC | 2 cut(s) | 195, 2486 |
| Hin6I | GCGC | 4 cut(s) | 97, 231, 695, 2486 |
| HinP1I | GCGC | 4 cut(s) | 97, 231, 695, 2486 |
| HincII | GTYRAC | 4 cut(s) | 453, 2021, 2376, 3173 |
| HindII | GTYRAC | 4 cut(s) | 453, 2021, 2376, 3173 |
| HindIII | AAGCTT | 2 cut(s) | 1754, 2528 |
| HpaII | CCGG | 4 cut(s) | 62, 283, 999, 3127 |
| Hpy166II | GTNNAC | 9 cut(s) | 313, 453, 889, 1096, 1262, 2021, 2376, 2548, 3173 |
| Hpy8I | GTNNAC | 9 cut(s) | 313, 453, 889, 1096, 1262, 2021, 2376, 2548, 3173 |
| Hpy99I | CGWCG | 4 cut(s) | 83, 104, 197, 200 |
| HpyCH4IV | ACGT | 2 cut(s) | 195, 3022 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 164, 237, 267, 1499, 2199, 3109, 3288 |
| HpySE526I | ACGT | 2 cut(s) | 195, 3022 |
| Hsp92I | GRCGYC | 2 cut(s) | 195, 2486 |
| HspAI | GCGC | 4 cut(s) | 97, 231, 695, 2486 |
| KasI | GGCGCC | 1 cut(s) | 2485 |
| Ksp22I | TGATCA | 2 cut(s) | 988, 1330 |
| KspI | CCGCGG | 1 cut(s) | 108 |
| LguI | GCTCTTC | 3 cut(s) | 949, 1137, 2289 |
| LmnI | GCTCC | 8 cut(s) | 30, 211, 702, 748, 1036, 1523, 1726, 2395 |
| Lsp1109I | GCAGC | 8 cut(s) | 45, 145, 257, 714, 1802, 3294, 3297, 3300 |
| MaeII | ACGT | 2 cut(s) | 195, 3022 |
| MaeIII | GTNAC | 9 cut(s) | 178, 188, 326, 400, 831, 1588, 1808, 2641, 2906 |
| MbiI | CCGCTC | 3 cut(s) | 2218, 2934, 3112 |
| MfeI | CAATTG | 1 cut(s) | 1762 |
| MflI | RGATCY | 4 cut(s) | 16, 632, 1040, 2236 |
| MhlI | GDGCHC | 5 cut(s) | 268, 961, 1152, 1731, 2827 |
| Mly113I | GGCGCC | 1 cut(s) | 2486 |
| MlyI | GAGTC | 7 cut(s) | 932, 983, 1091, 1112, 1878, 2891, 3305 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1993, 3049 |
| MseI | TTAA | 8 cut(s) | 741, 1428, 1635, 2003, 2112, 2147, 2598, 2711 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2553, 2817 |
| MspA1I | CMGCKG | 5 cut(s) | 107, 261, 270, 1815, 2928 |
| MspI | CCGG | 4 cut(s) | 62, 283, 999, 3127 |
| MspR9I | CCNGG | 3 cut(s) | 35, 492, 2273 |
| MunI | CAATTG | 1 cut(s) | 1762 |
| Mva1269I | GAATGC | 2 cut(s) | 1378, 2569 |
| MvaI | CCWGG | 3 cut(s) | 35, 492, 2273 |
| MvnI | CGCG | 3 cut(s) | 99, 107, 2122 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 164, 237, 267, 1499, 2199, 3109, 3288 |
| NarI | GGCGCC | 1 cut(s) | 2486 |
| NheI | GCTAGC | 1 cut(s) | 788 |
| NmeAIII | GCCGAG | 1 cut(s) | 193 |
| NmuCI | GTSAC | 5 cut(s) | 178, 326, 400, 831, 2906 |
| NotI | GCGGCCGC | 1 cut(s) | 2929 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspI | RCATGY | 5 cut(s) | 8, 727, 1283, 1718, 2688 |
| NspV | TTCGAA | 1 cut(s) | 3098 |
| PagI | TCATGA | 1 cut(s) | 2050 |
| PceI | AGGCCT | 2 cut(s) | 393, 2154 |
| PciSI | GCTCTTC | 3 cut(s) | 949, 1137, 2289 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 75 |
| PctI | GAATGC | 2 cut(s) | 1378, 2569 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1993, 3049 |
| PflFI | GACNNNGTC | 1 cut(s) | 324 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1843 |
| PinAI | ACCGGT | 1 cut(s) | 3126 |
| Ple19I | CGATCG | 1 cut(s) | 2180 |
| PleI | GAGTC | 7 cut(s) | 931, 982, 1091, 1111, 1878, 2891, 3305 |
| PluTI | GGCGCC | 1 cut(s) | 2489 |
| PpsI | GAGTC | 7 cut(s) | 931, 982, 1091, 1111, 1878, 2891, 3305 |
| PpuMI | RGGWCCY | 1 cut(s) | 1658 |
| PshBI | ATTAAT | 1 cut(s) | 2711 |
| PsiI | TTATAA | 1 cut(s) | 1799 |
| Psp124BI | GAGCTC | 2 cut(s) | 961, 1731 |
| Psp5II | RGGWCCY | 1 cut(s) | 1658 |
| Psp6I | CCWGG | 3 cut(s) | 33, 490, 2271 |
| PspEI | GGTNACC | 1 cut(s) | 400 |
| PspFI | CCCAGC | 2 cut(s) | 1083, 2105 |
| PspGI | CCWGG | 3 cut(s) | 33, 490, 2271 |
| PspOMI | GGGCCC | 1 cut(s) | 1148 |
| PspPI | GGNCC | 6 cut(s) | 911, 1148, 1149, 1262, 1658, 3224 |
| PspPPI | RGGWCCY | 1 cut(s) | 1658 |
| PstI | CTGCAG | 3 cut(s) | 481, 732, 1439 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3059 |
| PsuI | RGATCY | 4 cut(s) | 16, 632, 1040, 2236 |
| PsyI | GACNNNGTC | 1 cut(s) | 324 |
| PvuI | CGATCG | 1 cut(s) | 2180 |
| PvuII | CAGCTG | 1 cut(s) | 1815 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2553, 2817 |
| SacI | GAGCTC | 2 cut(s) | 961, 1731 |
| SacII | CCGCGG | 1 cut(s) | 108 |
| SalI | GTCGAC | 1 cut(s) | 3171 |
| SapI | GCTCTTC | 3 cut(s) | 949, 1137, 2289 |
| SaqAI | TTAA | 8 cut(s) | 741, 1428, 1635, 2003, 2112, 2147, 2598, 2711 |
| Sau96I | GGNCC | 6 cut(s) | 911, 1148, 1149, 1262, 1658, 3224 |
| ScaI | AGTACT | 2 cut(s) | 2956, 3327 |
| SchI | GAGTC | 7 cut(s) | 932, 983, 1091, 1112, 1878, 2891, 3305 |
| ScrFI | CCNGG | 3 cut(s) | 35, 492, 2273 |
| SduI | GDGCHC | 5 cut(s) | 268, 961, 1152, 1731, 2827 |
| SfcI | CTRYAG | 3 cut(s) | 477, 728, 1435 |
| SfoI | GGCGCC | 1 cut(s) | 2487 |
| Sfr303I | CCGCGG | 1 cut(s) | 108 |
| SfuI | TTCGAA | 1 cut(s) | 3098 |
| SgrBI | CCGCGG | 1 cut(s) | 108 |
| SinI | GGWCC | 4 cut(s) | 911, 1262, 1658, 3224 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2553, 2817 |
| SmlI | CTYRAG | 1 cut(s) | 3091 |
| SmoI | CTYRAG | 1 cut(s) | 3091 |
| SpeI | ACTAGT | 1 cut(s) | 1190 |
| SseBI | AGGCCT | 2 cut(s) | 393, 2154 |
| SspDI | GGCGCC | 1 cut(s) | 2485 |
| SstI | GAGCTC | 2 cut(s) | 961, 1731 |
| StuI | AGGCCT | 2 cut(s) | 393, 2154 |
| StyD4I | CCNGG | 3 cut(s) | 33, 490, 2271 |
| StyI | CCWWGG | 2 cut(s) | 2203, 3038 |
| TaiI | ACGT | 2 cut(s) | 198, 3025 |
| TaqI | TCGA | 9 cut(s) | 756, 963, 1619, 1644, 2176, 2180, 2253, 3098, 3172 |
| TatI | WGTACW | 4 cut(s) | 929, 1364, 2954, 3325 |
| TauI | GCSGC | 7 cut(s) | 107, 110, 2221, 2570, 2931, 2934, 3192 |
| Tru1I | TTAA | 8 cut(s) | 741, 1428, 1635, 2003, 2112, 2147, 2598, 2711 |
| Tru9I | TTAA | 8 cut(s) | 741, 1428, 1635, 2003, 2112, 2147, 2598, 2711 |
| TseFI | GTSAC | 5 cut(s) | 178, 326, 400, 831, 2906 |
| TseI | GCWGC | 8 cut(s) | 58, 158, 270, 727, 1815, 3282, 3285, 3288 |
| Tsp45I | GTSAC | 5 cut(s) | 178, 326, 400, 831, 2906 |
| TspGWI | ACGGA | 2 cut(s) | 1725, 2077 |
| Tth111I | GACNNNGTC | 1 cut(s) | 324 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1843 |
| VpaK11BI | GGWCC | 4 cut(s) | 911, 1262, 1658, 3224 |
| VspI | ATTAAT | 1 cut(s) | 2711 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2276 |
| XbaI | TCTAGA | 1 cut(s) | 1454 |
| XceI | RCATGY | 5 cut(s) | 8, 727, 1283, 1718, 2688 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3160 |
| XmiI | GTMKAC | 2 cut(s) | 1095, 3172 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1993, 3049 |
| ZraI | GACGTC | 1 cut(s) | 196 |
| ZrmI | AGTACT | 2 cut(s) | 2956, 3327 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |