Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0007452

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG474200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3354 bp

ATGCATGTATCGGTGGATCTAGGGTTTCGGAGCCTGGTAGTGGTGGCCTGCATCCTGCTGCCGGTGATCGGATTCTTCGTCGCTCGCCACAAATGGCGCGTCGCCGCGGCCAGAAGTCAGGAGATCAAGAGGCTTTTGGTGTTGGCATCACAGGAAGCTGCTAGAGCCGAGTTTGAGGTCACTACTGGTTACGACGTCGTTTTTGCTCCTGAGAAGAGGGATTCATATTGCGCCGTCTGCTACTGCCCCACCACCACCCGCTGTGCCCGCTGCAAGGCCGTCCGGTACTGTTCTGGGAAATGTCAAATTGTTCACTGGCGACAAGGTCACAGGTATAATTGCCAGCCTGCACGCATAGTTGATACAAATGTTGATGGGGAAAATGATGAAGGCCTGAAGGTGACCGAGAAAAATCTTGAAACTAATGCTGACAAGTTTGAAGCTAGGCAGTCAACTGAAAAATTCTCCGAGGAACCTGCAGTTCCTAATCCTGGTTGCCCTCCCGAGGTTCAGTGTGTAAAGGATGATGATAGTGAAGATGAATATCTTGCCGATAGAAAAGATACAAATTCTCCTTCTGGATCATCAGCTACCTCTTTTTCTGGATTTTCCACTTCTACAAACAGTAGTGGATCTTCAGACGATGTTTCTGTCAGTGAAAGTGTTAGTTCATTTGAACCTGACAGAGCAGATGCGCACCAATCTGCTAATGATACCCTTGACATGCTGCAGACTTCCTTTAATCTGGAGCAAATCGATCAATCTAGGCCATTATCCCCAAAGTTTGCTAGCTTGGTTGATTCTGTTGATGGATTTGGAAAACCAAGTGTGAACCATAATGGCACGAGGGAGGGTCCAGCTACCGAGTCTTGTACAGCATCTTCTGATTTCTGGGGAAGAGCTCTCGATTCTTTTGAGTCTGAGAGTGATGATCATGTGTCTGGTTCCTGTGTAGCTAGTAAAAGCAAGATTGCTCCTTCTGGATCCTCCTTACACATTTCATTTGATTCATCCACTGCTCTGCCCCAGCATATAGTAGACTCTGAGTCAAGTGGCAGTATATTGGATGATGCTCTTCCAGATTCTTCAGGGCCCAATAAGTCTGTATTTGGGGCTGAGTTATTGGTGAAGACTAGTGGAGATGTTTCAAGGGTCAGGAACTCCCCATCCCGGAACTTTGATGGGTTGAATAATGATGATGGTGGACCTAGCAGTGATTTACATGCCTTCAACTTTAGAGAAACTAAATCCATGCCATTCTCCTCTTCTTATGATCATAAATCTCTTAGCAGTAAAAGAGTTTCAAGTACAGATGCTTTGCATTCTAGTAGAGTGGTGCCTACAAGTTCAGAAAGGTTGAATCATAATGTTAATAACTGCAGTCGAACTTTGAAGTCTAGAGAAGCTGATCGTCAGTCATCCACTGTTTCTGATGCTTGTCTTGCATCTGGTGGTAGAGGCTCCTCAGTACCAAGTGTAAAATCTGGAAATGGTCATTCTGTTGAGGCTAGTGATACTGTTTCATCTCAGGTTACAAAATCTTCAAATGATAAGACTGGCTCGAAGACCTCTGTATTTAAAGTTTTCGATCAGTTTAGAGGACCTAAAATTTCGAAGCACTATCCTTTGGGAGTTGGGAGTGAAATTGCAGGAAAACATGCTGAGAAGGAGCTCTTTCCGTATGAAGTATTTGTCAAGCTTTACAATTGGAACAAGGTGGAATTGCAACCTTCTGGTCTTATAAATTGTGGTAACAGCTGCTATGCCAATGCAGTCCTCCAATGCTTGGCATTTACTCCGCCTCTGACTGCTTATTTGCTTCAGGGACGCCATTCTAAATCTTGTGCAAAGAAGGAATGGTGTTTCATGTGTGAGTTTGAATGTCTAATTTTGAAGGCCAAGGAAGGGAAGTCTCCACTGTCTCCTATTGGAATACTTTCCCAGTTAAGAAATATCGGAAGTCAACTTGGTAATGGGAGAGAAGAAGATGCTCATGAATTTCTAAGATATGCTATTGACACAATGCAATCCGTTTGCCTTATGGAAGCTGGGGTTAATGCTTCGCGGTCTTTGAAAGAGGAAACAACTTTAATAGGCCTTACCTTTGGAGGCTACCTTCGATCGAAGATAAAATGCACAAGGTGCCAAGGCAAGTCTGAGCGGCAAGAAAGAATGATGGATCTTACTGTTGAAATCGAGGGCGACATAGGAACCCTGGAAGAGGCTCTTCGGCAATTTACTGGCACTGAGGTCTTAGATGGTGAAAATAAATACCAATGTAGCAGATGCAAATCTTATGAGAAGGCCAAAAAGAAGTTGACAATACTGGAAGCTCCCAATGTCCTTACTATTGCATTGAAGCGATTTCAGTCAGGGAAATTTGGGAAGATCAATAAGCCTGTACGGTTTCCTGAAATTCTGGACTTGGCGCCTTACATGAGTGGTACAAGTGATAAATCACCCATATACAAGCTTTATGGGGTGGTTGTTCACTTGGATGTCATGAATGCTGCATTTTCTGGTCATTATGTGTGCTATGTTAAGAACTTGCAGAACAAGTGGTTCAAGATTGATGATAGCACGGTAACTGCTGTGGAACTTGAAAATGTCTTGGCAAAAGGGGCGTACATGCTTCTTTATTCAAGGTGTTCGGCGAGAGCCCCAAGATTAATAAGGAACAGAATAATATCTTCTGATCCCAAACATAGAGCCATTCCTGCATGGATCAGTGGAAAGAGTACCAATTTGAAATCAAAATCCTTTTCCACACATCCTAGTGGTGCTCAATTCCCCACTTCTAATCCTCCAGAGAATTCTACCAGTTATCCGCCATTGCAAAGGATTTCGGAAGAGGACTCATCAAGTGACAATTCTTCCCTTATCAGCGGCCGCTCTGATGGAGGTTCTTCTAGTACTGATAGCACTAGGTATTCTACTAGCACCGATGACTTCTCCGATTATTTATTCGGTGATTCAGGACGTGGGTGGAATGGCCCTTGGGGAAATTTTTCGGATTCTGACACTTCTTCCTCATCCTCTTCCTCACCCTTGAGTTCGAAGCACTCGCCGCTCTCTGATTCAAACCGGTACGCTTCAAGTTCCAGCGAAACCACTGGTCTTTGGGATGGTCGACCTGGGGATAGCCGTGGGTTCACAGATTCAGATGGCAAAGTGAGTGATCCTCTTTTGAATTCTGACATCACTAAACAGTGTAGAAAGGTAGCCAGTAGTAGTAGTAGTAGCAGCAGCAGCAGTAGTAGATATAGGGAAACCGACTCTGAGAGATTAGGACTTGATTCTTTAAGCAATGTAAAATTTAGAAAATCAAATTGCGAAAGAACAGCAGACTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0006464 GO:0006508 GO:0006807 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0008283 GO:0009628 GO:0009651 GO:0009791 GO:0009908 GO:0009987 GO:0016579 GO:0016787 GO:0019538 GO:0019783 GO:0022414 GO:0022622 GO:0032501 GO:0032502 GO:0036211 GO:0036459 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0047484 GO:0048364 GO:0048366 GO:0048367 GO:0048583 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050896 GO:0061458 GO:0065007 GO:0070011 GO:0070646 GO:0070647 GO:0071704 GO:0080134 GO:0090567 GO:0099402 GO:0101005 GO:0140096 GO:1901000 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UCH zf-MYND

Protein Analysis

1117

Amino Acids

121.68

Weight (kDa)

6.41

Isoelectric Point (pI)

52.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-MYND	PF01753	77 - 114	1.3e-06	MYND finger
UCH_1	PF13423	578 - 862	1.2e-23	Ubiquitin carboxyl-terminal hydrolase
UCH	PF00443	579 - 880	2.9e-55	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007452)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24560
fragaria_vesca	FvH4_5g35500 FvH4_5g35500 FvH4_5g35500 FvH4_5g35500
malus_domestica	MD08G1196200.v1.1 MD15G1384000.v1.1
prunus_persica	Prupe.1G530100_v2.0.a1 Prupe.1G530100_v2.0.a1
pyrus_communis	pycom08g16850 pycom15g34370
rosa_chinensis	RchiOBHm_Chr7g0236881
rosa_laevigata	RLG00000001053
rosa_multiflora	Rmu_co8158526.1_g000001 Rmu_sc0002867.1_g000006 Rmu_sc0017481.1_g000004 Rmu_sc0032933.1_g000001
rosa_roxburghii	Rroxscaffold_3G00224730
rosa_rugosa	Rorug07G0300500 Rorug07G0300600
rosa_samantha	Rh7AG455400 Rh7BG426600 Rh7CG474200 Rh7DG443400
rosa_wichuraiana	Rw7G037810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1742
AatII	GACGTC	1 cut(s)	198
Acc16I	TGCGCA	1 cut(s)	696
Acc36I	ACCTGC	1 cut(s)	484
AccB1I	GGYRCC	3 cut(s)	1336, 2142, 2428
AccB7I	CCANNNNNTGG	1 cut(s)	1786
AccBSI	CCGCTC	3 cut(s)	2161, 2892, 3070
AccI	GTMKAC	2 cut(s)	1038, 3130
AccII	CGCG	3 cut(s)	99, 107, 2065
AclWI	GGATC	9 cut(s)	24, 589, 640, 978, 991, 2187, 2690, 2732, 3173
AcoI	YGGCCR	2 cut(s)	108, 2887
AcuI	CTGAAG	4 cut(s)	416, 621, 1071, 1805
AcyI	GRCGYC	3 cut(s)	195, 1828, 2429
AdeI	CACNNNGTG	1 cut(s)	2142
AgeI	ACCGGT	1 cut(s)	3084
AhdI	GACNNNNNGTC	1 cut(s)	1045
AhlI	ACTAGT	1 cut(s)	1133
AjiI	CACGTC	1 cut(s)	2981
AjnI	CCWGG	4 cut(s)	33, 490, 2214, 3133
AloI	GAACNNNNNNTCC	2 cut(s)	1151, 1183
Alw21I	GWGCWC	3 cut(s)	904, 1674, 2785
Alw26I	GTCTC	2 cut(s)	1917, 1926
AlwI	GGATC	9 cut(s)	24, 589, 640, 978, 991, 2187, 2690, 2732, 3173
Ama87I	CYCGRG	1 cut(s)	503
ApaI	GGGCCC	1 cut(s)	1095
ApeKI	GCWGC	9 cut(s)	58, 158, 270, 727, 1758, 2510, 3243, 3246, 3249
ArsI	GACNNNNNNTTYG	6 cut(s)	84, 116, 185, 217, 1798, 1830
AseI	ATTAAT	1 cut(s)	2669
AsiGI	ACCGGT	1 cut(s)	3084
Asp700I	GAANNNNTTC	2 cut(s)	1936, 3007
AspLEI	GCGC	4 cut(s)	99, 233, 697, 2431
AspS9I	GGNCC	6 cut(s)	854, 1091, 1092, 1205, 1601, 2993
AsuC2I	CCSGG	1 cut(s)	1171
AsuHPI	GGTGA	7 cut(s)	76, 412, 1138, 2273, 2451, 2981, 3036
AsuII	TTCGAA	2 cut(s)	1613, 3056
AsuNHI	GCTAGC	1 cut(s)	788
AvaI	CYCGRG	1 cut(s)	503
AvaII	GGWCC	3 cut(s)	854, 1205, 1601
BaeGI	GKGCMC	2 cut(s)	268, 1095
BaeI	ACNNNNGTAYC	2 cut(s)	354, 387
BamHI	GGATCC	1 cut(s)	983
BanI	GGYRCC	3 cut(s)	1336, 2142, 2428
BanII	GRGCYC	4 cut(s)	904, 1095, 1674, 2662
BarI	GAAGNNNNNNTAC	4 cut(s)	619, 651, 865, 897
BauI	CACGAG	1 cut(s)	844
BbsI	GAAGAC	2 cut(s)	1136, 1571
Bbv12I	GWGCWC	3 cut(s)	904, 1674, 2785
BbvI	GCAGC	9 cut(s)	45, 145, 257, 714, 1745, 2497, 3255, 3258, 3261
BceAI	ACGGC	3 cut(s)	218, 263, 3129
BcgI	CGANNNNNNTGC	2 cut(s)	458, 492
BciT130I	CCWGG	4 cut(s)	35, 492, 2216, 3135
BclI	TGATCA	2 cut(s)	931, 1273
BcnI	CCSGG	1 cut(s)	1171
BcoDI	GTCTC	2 cut(s)	1917, 1926
BcuI	ACTAGT	1 cut(s)	1133
BfmI	CTRYAG	3 cut(s)	477, 728, 1378
BfoI	RGCGCY	1 cut(s)	2432
BfuAI	ACCTGC	1 cut(s)	484
BmcAI	AGTACT	1 cut(s)	2914
Bme1390I	CCNGG	5 cut(s)	35, 492, 1171, 2216, 3135
Bme18I	GGWCC	3 cut(s)	854, 1205, 1601
BmeRI	GACNNNNNGTC	1 cut(s)	1045
BmeT110I	CYCGRG	1 cut(s)	503
BmgBI	CACGTC	1 cut(s)	2981
BmgT120I	GGNCC	6 cut(s)	854, 1091, 1092, 1205, 1601, 2993
BmrFI	CCNGG	5 cut(s)	35, 492, 1171, 2216, 3135
BmrI	ACTGGG	1 cut(s)	1936
BmtI	GCTAGC	1 cut(s)	792
BmuI	ACTGGG	1 cut(s)	1936
BpiI	GAAGAC	2 cut(s)	1136, 1571
BplI	GAGNNNNNCTC	2 cut(s)	3166, 3198
BpmI	CTGGAG	2 cut(s)	767, 2790
Bpu14I	TTCGAA	2 cut(s)	1613, 3056
BpuEI	CTTGAG	1 cut(s)	3070
BpuMI	CCSGG	1 cut(s)	1171
Bsa29I	ATCGAT	1 cut(s)	756
BsaBI	GATNNNNATC	2 cut(s)	543, 2290
BsaHI	GRCGYC	3 cut(s)	195, 1828, 2429
BsaJI	CCNNGG	9 cut(s)	105, 468, 504, 1899, 2146, 2214, 2996, 3134, 3145
BsaWI	WCCGGW	2 cut(s)	282, 3084
BsaXI	ACNNNNNCTCC	2 cut(s)	556, 586
Bse118I	RCCGGY	2 cut(s)	61, 3084
Bse1I	ACTGG	9 cut(s)	190, 320, 1561, 1942, 2245, 2331, 2820, 3118, 3225
Bse3DI	GCAATG	2 cut(s)	2831, 3313
Bse8I	GATNNNNATC	2 cut(s)	543, 2290
BseBI	CCWGG	4 cut(s)	35, 492, 2216, 3135
BseCI	ATCGAT	1 cut(s)	756
BseDI	CCNNGG	9 cut(s)	105, 468, 504, 1899, 2146, 2214, 2996, 3134, 3145
BseJI	GATNNNNATC	2 cut(s)	543, 2290
BseMI	GCAATG	2 cut(s)	2831, 3313
BseNI	ACTGG	9 cut(s)	190, 320, 1561, 1942, 2245, 2331, 2820, 3118, 3225
BseRI	GAGGAG	2 cut(s)	1252, 1453
BseSI	GKGCMC	2 cut(s)	268, 1095
BseX3I	CGGCCG	1 cut(s)	2887
BseXI	GCAGC	9 cut(s)	45, 145, 257, 714, 1745, 2497, 3255, 3258, 3261
BseYI	CCCAGC	2 cut(s)	1026, 2048
BsgI	GTGCAG	1 cut(s)	333
Bsh1236I	CGCG	3 cut(s)	99, 107, 2065
Bsh1285I	CGRYCG	2 cut(s)	2123, 2890
BshNI	GGYRCC	3 cut(s)	1336, 2142, 2428
BshTI	ACCGGT	1 cut(s)	3084
BshVI	ATCGAT	1 cut(s)	756
BsiEI	CGRYCG	2 cut(s)	2123, 2890
BsiHKAI	GWGCWC	3 cut(s)	904, 1674, 2785
BsiHKCI	CYCGRG	1 cut(s)	503
BsiSI	CCGG	4 cut(s)	62, 283, 1171, 3085
BslFI	GGGAC	1 cut(s)	1839
BsmAI	GTCTC	2 cut(s)	1917, 1926
BsmFI	GGGAC	1 cut(s)	1839
BsmI	GAATGC	2 cut(s)	1321, 2512
BsoBI	CYCGRG	1 cut(s)	503
Bsp119I	TTCGAA	2 cut(s)	1613, 3056
Bsp120I	GGGCCC	1 cut(s)	1091
Bsp1286I	GDGCHC	6 cut(s)	268, 904, 1095, 1674, 2662, 2785
Bsp1407I	TGTACA	1 cut(s)	872
BspDI	ATCGAT	1 cut(s)	756
BspFNI	CGCG	3 cut(s)	99, 107, 2065
BspHI	TCATGA	2 cut(s)	1993, 2502
BspMAI	CTGCAG	3 cut(s)	481, 732, 1382
BspMI	ACCTGC	1 cut(s)	484
BspOI	GCTAGC	1 cut(s)	792
BspPI	GGATC	9 cut(s)	24, 589, 640, 978, 991, 2187, 2690, 2732, 3173
BspQI	GCTCTTC	3 cut(s)	892, 1080, 2232
BspT104I	TTCGAA	2 cut(s)	1613, 3056
BspT107I	GGYRCC	3 cut(s)	1336, 2142, 2428
BsrBI	CCGCTC	3 cut(s)	2161, 2892, 3070
BsrDI	GCAATG	2 cut(s)	2831, 3313
BsrFI	RCCGGY	2 cut(s)	61, 3084
BsrGI	TGTACA	1 cut(s)	872
BsrI	ACTGG	9 cut(s)	190, 320, 1561, 1942, 2245, 2331, 2820, 3118, 3225
BssAI	RCCGGY	2 cut(s)	61, 3084
BssECI	CCNNGG	9 cut(s)	105, 468, 504, 1899, 2146, 2214, 2996, 3134, 3145
BssNI	GRCGYC	3 cut(s)	195, 1828, 2429
BssSI	CACGAG	1 cut(s)	844
BssT1I	CCWWGG	3 cut(s)	1899, 2146, 2996
Bst2BI	CACGAG	1 cut(s)	844
Bst2UI	CCWGG	4 cut(s)	35, 492, 2216, 3135
Bst4CI	ACNGT	9 cut(s)	290, 626, 1426, 1519, 1920, 2188, 2406, 2584, 3210
Bst6I	CTCTTC	8 cut(s)	209, 892, 1080, 1270, 2214, 2232, 2844, 3043
BstACI	GRCGYC	3 cut(s)	195, 1828, 2429
BstAPI	GCANNNNNTGC	1 cut(s)	2142
BstAUI	TGTACA	1 cut(s)	872
BstBI	TTCGAA	2 cut(s)	1613, 3056
BstC8I	GCNNGC	7 cut(s)	49, 85, 268, 344, 348, 352, 790
BstDSI	CCRYGG	2 cut(s)	105, 3145
BstEII	GGTNACC	1 cut(s)	400
BstENI	CCTNNNNNAGG	1 cut(s)	2219
BstFNI	CGCG	3 cut(s)	99, 107, 2065
BstH2I	RGCGCY	1 cut(s)	2432
BstHHI	GCGC	4 cut(s)	99, 233, 697, 2431
BstMAI	GTCTC	2 cut(s)	1917, 1926
BstMCI	CGRYCG	2 cut(s)	2123, 2890
BstMWI	GCNNNNNNNGC	9 cut(s)	164, 237, 267, 1442, 2142, 2621, 2717, 3067, 3249
BstNI	CCWGG	4 cut(s)	35, 492, 2216, 3135
BstNSI	RCATGY	5 cut(s)	8, 727, 1226, 1661, 2632
BstPI	GGTNACC	1 cut(s)	400
BstSCI	CCNGG	5 cut(s)	33, 490, 1169, 2214, 3133
BstSFI	CTRYAG	3 cut(s)	477, 728, 1378
BstSLI	GKGCMC	2 cut(s)	268, 1095
BstUI	CGCG	3 cut(s)	99, 107, 2065
BstV1I	GCAGC	9 cut(s)	45, 145, 257, 714, 1745, 2497, 3255, 3258, 3261
BstV2I	GAAGAC	2 cut(s)	1136, 1571
BstX2I	RGATCY	4 cut(s)	16, 632, 983, 2179
BstYI	RGATCY	4 cut(s)	16, 632, 983, 2179
BstZI	CGGCCG	1 cut(s)	2887
Bsu15I	ATCGAT	1 cut(s)	756
BsuTUI	ATCGAT	1 cut(s)	756
BtgI	CCRYGG	2 cut(s)	105, 3145
BtrI	CACGTC	1 cut(s)	2981
BtsI	GCAGTG	2 cut(s)	1014, 1219
BveI	ACCTGC	1 cut(s)	484
Cac8I	GCNNGC	7 cut(s)	49, 85, 268, 344, 348, 352, 790
CciI	TCATGA	2 cut(s)	1993, 2502
CciNI	GCGGCCGC	1 cut(s)	2887
CfoI	GCGC	4 cut(s)	99, 233, 697, 2431
Cfr10I	RCCGGY	2 cut(s)	61, 3084
Cfr13I	GGNCC	6 cut(s)	854, 1091, 1092, 1205, 1601, 2993
Cfr42I	CCGCGG	1 cut(s)	108
ClaI	ATCGAT	1 cut(s)	756
CseI	GACGC	2 cut(s)	88, 1836
CspAI	ACCGGT	1 cut(s)	3084
DinI	GGCGCC	1 cut(s)	2430
DraI	TTTAAA	1 cut(s)	1579
DraIII	CACNNNGTG	1 cut(s)	2142
DriI	GACNNNNNGTC	1 cut(s)	1045
EaeI	YGGCCR	2 cut(s)	108, 2887
EagI	CGGCCG	1 cut(s)	2887
Eam1104I	CTCTTC	8 cut(s)	209, 892, 1080, 1270, 2214, 2232, 2844, 3043
Eam1105I	GACNNNNNGTC	1 cut(s)	1045
EarI	CTCTTC	8 cut(s)	209, 892, 1080, 1270, 2214, 2232, 2844, 3043
EciI	GGCGGA	2 cut(s)	1788, 2817
Ecl136II	GAGCTC	2 cut(s)	902, 1672
EclXI	CGGCCG	1 cut(s)	2887
Eco130I	CCWWGG	3 cut(s)	1899, 2146, 2996
Eco147I	AGGCCT	2 cut(s)	393, 2097
Eco24I	GRGCYC	4 cut(s)	904, 1095, 1674, 2662
Eco47I	GGWCC	3 cut(s)	854, 1205, 1601
Eco52I	CGGCCG	1 cut(s)	2887
Eco53kI	GAGCTC	2 cut(s)	902, 1672
Eco57I	CTGAAG	4 cut(s)	416, 621, 1071, 1805
Eco88I	CYCGRG	1 cut(s)	503
Eco91I	GGTNACC	1 cut(s)	400
EcoICRI	GAGCTC	2 cut(s)	902, 1672
EcoNI	CCTNNNNNAGG	1 cut(s)	2219
EcoO109I	RGGNCCY	2 cut(s)	1091, 1601
EcoO65I	GGTNACC	1 cut(s)	400
EcoRI	GAATTC	2 cut(s)	2812, 3190
EcoRII	CCWGG	4 cut(s)	33, 490, 2214, 3133
EcoT14I	CCWWGG	3 cut(s)	1899, 2146, 2996
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	4 cut(s)	904, 1095, 1674, 2662
EgeI	GGCGCC	1 cut(s)	2430
EheI	GGCGCC	1 cut(s)	2430
ErhI	CCWWGG	3 cut(s)	1899, 2146, 2996
FalI	AAGNNNNNCTT	4 cut(s)	1658, 1690, 2211, 2243
FaqI	GGGAC	1 cut(s)	1839
FauI	CCCGC	2 cut(s)	266, 275
FbaI	TGATCA	2 cut(s)	931, 1273
FblI	GTMKAC	2 cut(s)	1038, 3130
FriOI	GRGCYC	4 cut(s)	904, 1095, 1674, 2662
FspAI	RTGCGCAY	1 cut(s)	696
FspI	TGCGCA	1 cut(s)	696
GlaI	GCGC	4 cut(s)	98, 232, 696, 2430
GsaI	CCCAGC	2 cut(s)	1030, 2052
GsuI	CTGGAG	2 cut(s)	767, 2790
HaeII	RGCGCY	1 cut(s)	2432
HapII	CCGG	4 cut(s)	62, 283, 1171, 3085
HgaI	GACGC	2 cut(s)	88, 1836
HhaI	GCGC	4 cut(s)	99, 233, 697, 2431
Hin1I	GRCGYC	3 cut(s)	195, 1828, 2429
Hin6I	GCGC	4 cut(s)	97, 231, 695, 2429
HinP1I	GCGC	4 cut(s)	97, 231, 695, 2429
HincII	GTYRAC	4 cut(s)	453, 1964, 2319, 3131
HindII	GTYRAC	4 cut(s)	453, 1964, 2319, 3131
HindIII	AAGCTT	2 cut(s)	1697, 2471
HpaII	CCGG	4 cut(s)	62, 283, 1171, 3085
HphI	GGTGA	7 cut(s)	76, 412, 1138, 2273, 2451, 2981, 3036
Hpy99I	CGWCG	4 cut(s)	83, 104, 197, 200
HpyCH4III	ACNGT	9 cut(s)	290, 626, 1426, 1519, 1920, 2188, 2406, 2584, 3210
HpyCH4IV	ACGT	2 cut(s)	195, 2980
HpyF10VI	GCNNNNNNNGC	9 cut(s)	164, 237, 267, 1442, 2142, 2621, 2717, 3067, 3249
HpySE526I	ACGT	2 cut(s)	195, 2980
Hsp92I	GRCGYC	3 cut(s)	195, 1828, 2429
HspAI	GCGC	4 cut(s)	97, 231, 695, 2429
KasI	GGCGCC	1 cut(s)	2428
Ksp22I	TGATCA	2 cut(s)	931, 1273
KspI	CCGCGG	1 cut(s)	108
LguI	GCTCTTC	3 cut(s)	892, 1080, 2232
LmnI	GCTCC	7 cut(s)	30, 211, 748, 979, 1466, 1669, 2338
Lsp1109I	GCAGC	9 cut(s)	45, 145, 257, 714, 1745, 2497, 3255, 3258, 3261
MaeII	ACGT	2 cut(s)	195, 2980
MaeIII	GTNAC	8 cut(s)	178, 188, 326, 400, 1531, 1751, 2584, 2864
MbiI	CCGCTC	3 cut(s)	2161, 2892, 3070
MfeI	CAATTG	1 cut(s)	1705
MflI	RGATCY	4 cut(s)	16, 632, 983, 2179
MhlI	GDGCHC	6 cut(s)	268, 904, 1095, 1674, 2662, 2785
Mly113I	GGCGCC	1 cut(s)	2429
MlyI	GAGTC	6 cut(s)	875, 926, 1034, 1055, 2849, 3269
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	2 cut(s)	1936, 3007
MseI	TTAA	9 cut(s)	741, 1371, 1578, 1946, 2055, 2090, 2541, 2669, 3302
MslI	CAYNNNNRTG	2 cut(s)	2496, 2775
MspA1I	CMGCKG	5 cut(s)	107, 261, 270, 1758, 2886
MspI	CCGG	4 cut(s)	62, 283, 1171, 3085
MspR9I	CCNGG	5 cut(s)	35, 492, 1171, 2216, 3135
MunI	CAATTG	1 cut(s)	1705
Mva1269I	GAATGC	2 cut(s)	1321, 2512
MvaI	CCWGG	4 cut(s)	35, 492, 2216, 3135
MvnI	CGCG	3 cut(s)	99, 107, 2065
MwoI	GCNNNNNNNGC	9 cut(s)	164, 237, 267, 1442, 2142, 2621, 2717, 3067, 3249
NarI	GGCGCC	1 cut(s)	2429
NciI	CCSGG	1 cut(s)	1171
NheI	GCTAGC	1 cut(s)	788
NmeAIII	GCCGAG	1 cut(s)	193
NmuCI	GTSAC	4 cut(s)	178, 326, 400, 2864
NotI	GCGGCCGC	1 cut(s)	2887
NsbI	TGCGCA	1 cut(s)	696
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	5 cut(s)	8, 727, 1226, 1661, 2632
NspV	TTCGAA	2 cut(s)	1613, 3056
PagI	TCATGA	2 cut(s)	1993, 2502
PceI	AGGCCT	2 cut(s)	393, 2097
PciSI	GCTCTTC	3 cut(s)	892, 1080, 2232
PcsI	WCGNNNNNNNCGW	1 cut(s)	75
PctI	GAATGC	2 cut(s)	1321, 2512
PdmI	GAANNNNTTC	2 cut(s)	1936, 3007
PflFI	GACNNNGTC	1 cut(s)	324
PflMI	CCANNNNNTGG	1 cut(s)	1786
PfoI	TCCNGGA	1 cut(s)	1169
PinAI	ACCGGT	1 cut(s)	3084
Ple19I	CGATCG	1 cut(s)	2123
PleI	GAGTC	6 cut(s)	874, 925, 1034, 1054, 2849, 3269
PluTI	GGCGCC	1 cut(s)	2432
PpsI	GAGTC	6 cut(s)	874, 925, 1034, 1054, 2849, 3269
PpuMI	RGGWCCY	1 cut(s)	1601
PshBI	ATTAAT	1 cut(s)	2669
PsiI	TTATAA	1 cut(s)	1742
Psp124BI	GAGCTC	2 cut(s)	904, 1674
Psp5II	RGGWCCY	1 cut(s)	1601
Psp6I	CCWGG	4 cut(s)	33, 490, 2214, 3133
PspEI	GGTNACC	1 cut(s)	400
PspFI	CCCAGC	2 cut(s)	1026, 2048
PspGI	CCWGG	4 cut(s)	33, 490, 2214, 3133
PspOMI	GGGCCC	1 cut(s)	1091
PspPI	GGNCC	6 cut(s)	854, 1091, 1092, 1205, 1601, 2993
PspPPI	RGGWCCY	1 cut(s)	1601
PstI	CTGCAG	3 cut(s)	481, 732, 1382
PsuI	RGATCY	4 cut(s)	16, 632, 983, 2179
PsyI	GACNNNGTC	1 cut(s)	324
PvuI	CGATCG	1 cut(s)	2123
PvuII	CAGCTG	1 cut(s)	1758
RseI	CAYNNNNRTG	2 cut(s)	2496, 2775
SacI	GAGCTC	2 cut(s)	904, 1674
SacII	CCGCGG	1 cut(s)	108
SalI	GTCGAC	1 cut(s)	3129
SapI	GCTCTTC	3 cut(s)	892, 1080, 2232
SaqAI	TTAA	9 cut(s)	741, 1371, 1578, 1946, 2055, 2090, 2541, 2669, 3302
Sau96I	GGNCC	6 cut(s)	854, 1091, 1092, 1205, 1601, 2993
ScaI	AGTACT	1 cut(s)	2914
SchI	GAGTC	6 cut(s)	875, 926, 1034, 1055, 2849, 3269
ScrFI	CCNGG	5 cut(s)	35, 492, 1171, 2216, 3135
SduI	GDGCHC	6 cut(s)	268, 904, 1095, 1674, 2662, 2785
SfcI	CTRYAG	3 cut(s)	477, 728, 1378
SfoI	GGCGCC	1 cut(s)	2430
Sfr303I	CCGCGG	1 cut(s)	108
SfuI	TTCGAA	2 cut(s)	1613, 3056
SgrBI	CCGCGG	1 cut(s)	108
SinI	GGWCC	3 cut(s)	854, 1205, 1601
SmiMI	CAYNNNNRTG	2 cut(s)	2496, 2775
SmlI	CTYRAG	1 cut(s)	3049
SmoI	CTYRAG	1 cut(s)	3049
SpeI	ACTAGT	1 cut(s)	1133
SseBI	AGGCCT	2 cut(s)	393, 2097
SspDI	GGCGCC	1 cut(s)	2428
SstI	GAGCTC	2 cut(s)	904, 1674
StuI	AGGCCT	2 cut(s)	393, 2097
StyD4I	CCNGG	5 cut(s)	33, 490, 1169, 2214, 3133
StyI	CCWWGG	3 cut(s)	1899, 2146, 2996
TaaI	ACNGT	9 cut(s)	290, 626, 1426, 1519, 1920, 2188, 2406, 2584, 3210
TaiI	ACGT	2 cut(s)	198, 2983
TaqII	GACCGA	1 cut(s)	419
TatI	WGTACW	3 cut(s)	872, 1307, 2912
TauI	GCSGC	6 cut(s)	107, 110, 2164, 2889, 2892, 3070
Tru1I	TTAA	9 cut(s)	741, 1371, 1578, 1946, 2055, 2090, 2541, 2669, 3302
Tru9I	TTAA	9 cut(s)	741, 1371, 1578, 1946, 2055, 2090, 2541, 2669, 3302
TseFI	GTSAC	4 cut(s)	178, 326, 400, 2864
TseI	GCWGC	9 cut(s)	58, 158, 270, 727, 1758, 2510, 3243, 3246, 3249
Tsp45I	GTSAC	4 cut(s)	178, 326, 400, 2864
TspGWI	ACGGA	2 cut(s)	1668, 2020
Tth111I	GACNNNGTC	1 cut(s)	324
Van91I	CCANNNNNTGG	1 cut(s)	1786
VpaK11BI	GGWCC	3 cut(s)	854, 1205, 1601
VspI	ATTAAT	1 cut(s)	2669
XagI	CCTNNNNNAGG	1 cut(s)	2219
XbaI	TCTAGA	1 cut(s)	1397
XceI	RCATGY	5 cut(s)	8, 727, 1226, 1661, 2632
XmiI	GTMKAC	2 cut(s)	1038, 3130
XmnI	GAANNNNTTC	2 cut(s)	1936, 3007
ZraI	GACGTC	1 cut(s)	196
ZrmI	AGTACT	1 cut(s)	2914
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.