FvH4_5g37120

methyl-CpG-binding domain-containing protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
27206219 .. 27213599
7381 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g37120.t1

Sequence Viewer

Length: 3588 bp
ATGCACGCGTTAGCCACGTTCCCATATAATTTCAATTTTCCACACCACTGTAGAGGTTGTAGTACCGAAACGCCCCTGTTTCGATTTCCATTCCGATTTCGATTTTTGATTTTTGATTTTCCAAATTTCAATGCCATCATGGCCACCGTCGACCACCACCACCACCTGGACTCCGTCCCCGTCGTCGACCTCCGCCTCCTCACTCAATCCGAACTCTACTCCCTCTCCCTCTCCTCCTCCTCCTCCTCCGCCTCTCACCGCTTCGACGACGACGTTTTGATCCCCAAAATCGACCGCTCCGTCTTCAACGAATCCGCCGGCAGCCGCAAACAGACCTACTCCCGCCTTCGCCTGGCCCCTCGCAACGCCGCCGCCGCCTCCTCCTCCTCCAAATCCAAATCCGCCCTCCCTCGCCTCCTCCTCTCCCAGCCGCTCGATCACGAGAGCCGCCAGATTATCTCGCTCCTCAAGCAGCTCTTCCCCTCCGAGAATCAAAACGACGACGACGTCCTCCTCCTCGAAACCACACCTCCGCCGCAGTACAGATACCTCGCCTTGCCGGAGCCGAAGCCTTGTTCCCTCACCACCGCGGCTGGTGCGGTTTCCGGCGTCGATTCCTCGCTCGGGAAACGGAAGCGAGGCCGGCCGCGCAAGGATTCTTACGCCGTGGTTTCCAGACCGGAGGCGGCCGTGCCGGTAAACTCTGCCGCGCTAACTGCCGGTGCCGGTGAGGCTAGGGATGGCAATGCCGGTGTTTCGATCGAAAAGCGTGATGGTGAAGGTGAAGTTGCGGCGGTTGGGACATTTGTTCTGAATAGCCAAGGACAGCTTGTGCAGAGCAGCGAAGGGAAGAGAAAGCGAGGCCGGCCGCGGAAGGATGAGGTTAGGGTGAGGGATGAGAGCAGGGCGGTGGCTCCGGTGGCGGTGAGGAAACCGAGAGTGAAGAAGGAAGTGAAAGAGGAGGATGGAGATATGGTGCTGGTGAACCGAAATGACGAGGTTGTGGACTTGGATGCATTGGCCAATGTGGATATTGCGTTTGGGGAGGAGTTGAGGAAGAGGACAGAAGGGTTGGAGAGTGAGGCGCAGTTGTTAGGGTTTCTGGAAGGGTTGCAGGGGGACTGGTCGAGTGCTAGGAAGAAGAGGAAGATTGTGCAGGCGAGTGAGCTCGGTGACTTGTTGCCCAAGTGGTGGAAGATCATGCTGTCTCTCAAGAGGAACGGAGGTCATAAATCGCTTGTGTGTAGGCGGTTCATAAGCCCTAATGGGTTGGAGTTTGTGTCGTGCAAGGAAGTTTCTTCATACTTGCACTCTTATTTTGGACTCGGAAGCCAGTCAAATCCTGTTCATACCATTGGGAATATTCAGGTTTCTAATAAAATGGTTTTGGGAGATGGAATGCAACATGACAATAATTTCTCCTATGAAGATAACAACAATGGTCATGAGCTTCTTTGCTGCTCCCCAATGCCCATGACCTCTATGAACAGCTATGTCAAGAGCATTGAAGCGTCAGAAGAAGTAATGGGTATGCGGAAAAAATTGGATCCTGTAAAGAGTGGTCGTTTTGGGACATCCTTGAAAATTCAAGAACCAGTTGAGATAGACGGGGATGATTTGAGTTCTGATTTCTCTCTGGGTAAGGTAAATGATATCATGGCAAAATATTTTGCCACATCCATTGATGAACCAAATTCAATGTCCTGTGAGGAGCAAGCCATGAAGGCTGACAACACAATTTGCTTTTCTGATGGATTAAATGATGGTGTCAGGGTTCCCATCAGCTCAGTTGATGTGCCCAATGTGGAGATAGACAGTGCTTCAAATGAGATGGGAAAAGAACATGGAGCTGACAATATTGAAAATCACCAATCAACTAGCACTGTAGACGATATGAAAATTGATGATGTGGATAATTGTAGGAATGGCAGGTCAATATCTGGTATTAGTGAGAGTCATATTGGACCTGAGACTGCAAATAGTAATGTTGACCAACAAAGTACTTCAGAAGCCTGCTCGCTTGTTCCTTCAATTGTGATGGAGTCTCTTCACGAAAGAGGTTCTGACAGTGGTTTATATAGTACAGCCACTGATGATAAAACATGTGTTGATAACTTCAATAATGATTCATTGTCCACATTTTATGAGAGCAGATTTATTGATATTGGCCTATCTGGGAGCAATGAGAAGCCATTTTGTTTTGGCGGCGATCATGCTATGCCAGATGTAGATTCCATGGAAATCAGTGAGCAAATTCGAAGTACTGGAAGCTGTTCAATTGTTTCACCTCTGGATGGACAAAGTTGTATTAATAATGCAACGAATCCTTGTTGCACAGTCGAAGAGCAGGAAAAGAGTTTAGCAAGCAACGCAGTCAATTTATCTGTTAATAAGCAGACTCCTGTTAATCTAAATAAGGGTGGTATTGATACAGCAGAAAGGCATGAAGTTCAGCATGCCAAAAATTATGACAATAGTGAGTTAAGTGTTAACTTTTGTAGCAGGGCCACTGGAACTAATGTGGATACCACCTCTTACATTAACCCGGAAAGGAGCTCTACAGGATATTCACTTGCTTCATATGCAAACGAGCATGCATCTGTTTCAGAAAATAGTTTTGTCTGCAATAGCATTTTGGAAGAACATCAGCCCGATAGAGGTTCTTTTGAAACTGATTTGGTTTGCCCATCAGGGTATCGACAAGGATATAATCCGGTAAATCATGCAAACAGCACATCTTCAAGGCCAACTTTTGGCAGCAGTTGTAGTGGACAAGAAGCGAATGCTATCAGTGGCACTGTGACCGGAATAAATGCTCAAGCACCCTCCCTTGTTCTTTCAGAGGATAACCAATTATTTGCTACTGGCTCTGACATATTTAGTAGCTCAGTATTGAACGATAAGCTGATAAGAGTTCCTGTTAATGACTTATCACGCCCAAGTGGTGGTGAGCAAACCCCTGACTTTGTAAGTAATCTGAATGGGGTCTATAGCACTACATTGTGGGAACAGCCTAAATCCAAGGGTGCAGAACATTTAAATGACAATGAACCCATCAATGGTTTTTTAAATGATTCACAACCTACTGCTGATTTAATGTCCGAGCTTCTGTGGAGAAATGTTGAGCAAAACATCCAGCAGAGTGGATTGGCTGACACTTCTGCACTTATGCAATCATCTGGCAGCTATCCAAACTTTGATATGCTGTCAGGCAAGGGTGAGAATGGAGCTTTAAGCACAAGTGAACAATTTGACAACACTCGATGTTTGGAAGGATTAAAGTCAAGTAGATTAGAGCAGTTTGAGCCTGACTTTTTGACTGCTCAAGCAACCTCTCAATCAAAGGAATCAAATGTGTTGTCATATGATGAGAATATAGAGCAAGGTTTCAATTCATCTGGTTGGCCGGAGAAGGTTGCACTGTCTTCGGTGCCAAATATAGAAAGCAGGCTTGAGATTAACAGCTGTGTCTGGTGCAGAAATGATCTCTATCATGATGCTTATGGAGCCGGAATGCAAACCGGTTCAGTGGGTATTATGTGTGCAAATTGCCAGGGCAAGTTCTCAGGTCATGTCAGTTTTCTGTAG

Protein Analysis

1196

Amino Acids

130.32

Weight (kDa)

5.01

Isoelectric Point (pI)

47.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 299, 506
AatII GACGTC 1 cut(s) 510
Acc36I ACCTGC 1 cut(s) 1920
AccB1I GGYRCC 2 cut(s) 722, 3430
AccB7I CCANNNNNTGG 4 cut(s) 166, 1191, 2753, 2945
AccBSI CCGCTC 2 cut(s) 297, 433
AccI GTMKAC 3 cut(s) 150, 186, 1887
AccII CGCG 5 cut(s) 8, 590, 649, 710, 871
AclWI GGATC 3 cut(s) 274, 1541, 1554
AcoI YGGCCR 6 cut(s) 141, 644, 687, 866, 1020, 3404
AcsI RAATTY 4 cut(s) 124, 1584, 1693, 2253
AcuI CTGAAG 1 cut(s) 1989
AcyI GRCGYC 2 cut(s) 507, 609
AfaI GTAC 5 cut(s) 64, 542, 2002, 2083, 2263
AfiI CCNNNNNNNGG 9 cut(s) 166, 352, 624, 1191, 2294, 2657, 2753, 2945, 3059
AflIII ACRYGT 2 cut(s) 6, 2102
AgeI ACCGGT 1 cut(s) 3521
AjnI CCWGG 3 cut(s) 165, 351, 3552
Alw21I GWGCWC 2 cut(s) 1170, 2558
Alw26I GTCTC 3 cut(s) 1212, 1964, 2049
AlwI GGATC 3 cut(s) 274, 1541, 1554
AlwNI CAGNNNCTG 1 cut(s) 2090
Ama87I CYCGRG 1 cut(s) 623
ApeKI GCWGC 6 cut(s) 321, 472, 840, 1458, 2757, 3183
ApoI RAATTY 4 cut(s) 124, 1584, 1693, 2253
ArsI GACNNNNNNTTYG 4 cut(s) 1685, 1717, 3344, 3376
AseI ATTAAT 1 cut(s) 2310
AsiGI ACCGGT 1 cut(s) 3521
Asp700I GAANNNNTTC 1 cut(s) 2272
AspLEI GCGC 3 cut(s) 651, 712, 1087
AspS9I GGNCC 3 cut(s) 355, 1964, 2505
AsuC2I CCSGG 1 cut(s) 2546
AsuII TTCGAA 1 cut(s) 2257
AvaI CYCGRG 1 cut(s) 623
AvaII GGWCC 1 cut(s) 1964
BaeGI GKGCMC 1 cut(s) 1800
BalI TGGCCA 2 cut(s) 143, 1022
BamHI GGATCC 1 cut(s) 1546
BanI GGYRCC 2 cut(s) 722, 3430
BanII GRGCYC 2 cut(s) 1170, 2558
BauI CACGAG 1 cut(s) 440
BbsI GAAGAC 2 cut(s) 295, 3417
Bbv12I GWGCWC 2 cut(s) 1170, 2558
BbvI GCAGC 6 cut(s) 333, 484, 852, 1445, 2769, 3195
BceAI ACGGC 2 cut(s) 650, 674
BcgI CGANNNNNNTGC 2 cut(s) 3408, 3442
BciT130I CCWGG 3 cut(s) 167, 353, 3554
BciVI GTATCC 1 cut(s) 2518
BcnI CCSGG 1 cut(s) 2546
BcoDI GTCTC 3 cut(s) 1212, 1964, 2049
BfaI CTAG 3 cut(s) 735, 1134, 1878
BfmI CTRYAG 5 cut(s) 49, 1884, 2559, 2989, 3584
BfuAI ACCTGC 1 cut(s) 1920
BfuI GTATCC 1 cut(s) 2518
BglI GCCNNNNNGGC 3 cut(s) 140, 731, 1724
BmcAI AGTACT 2 cut(s) 2002, 2263
Bme1390I CCNGG 4 cut(s) 167, 353, 2546, 3554
Bme18I GGWCC 1 cut(s) 1964
BmeT110I CYCGRG 1 cut(s) 623
BmgT120I GGNCC 3 cut(s) 355, 1964, 2505
BmiI GGNNCC 8 cut(s) 357, 564, 724, 915, 1548, 1776, 3432, 3508
BmrFI CCNGG 4 cut(s) 167, 353, 2546, 3554
BmsI GCATC 3 cut(s) 1003, 2606, 3487
BpiI GAAGAC 2 cut(s) 295, 3417
Bpu14I TTCGAA 1 cut(s) 2257
BpuEI CTTGAG 5 cut(s) 452, 1196, 2802, 3309, 3473
BpuMI CCSGG 1 cut(s) 2546
BsaBI GATNNNNATC 1 cut(s) 3489
BsaHI GRCGYC 2 cut(s) 507, 609
BsaJI CCNNGG 7 cut(s) 588, 666, 820, 869, 2235, 3021, 3553
BsaWI WCCGGW 5 cut(s) 679, 916, 2713, 2804, 3521
Bsc4I CCNNNNNNNGG 9 cut(s) 166, 352, 624, 1191, 2294, 2657, 2753, 2945, 3059
Bse118I RCCGGY 8 cut(s) 317, 642, 694, 719, 725, 749, 864, 3521
Bse1I ACTGG 6 cut(s) 1127, 1333, 1595, 2269, 2515, 2869
Bse3DI GCAATG 2 cut(s) 751, 2188
Bse8I GATNNNNATC 1 cut(s) 3489
BseBI CCWGG 3 cut(s) 167, 353, 3554
BseDI CCNNGG 7 cut(s) 588, 666, 820, 869, 2235, 3021, 3553
BseJI GATNNNNATC 1 cut(s) 3489
BseLI CCNNNNNNNGG 9 cut(s) 166, 352, 624, 1191, 2294, 2657, 2753, 2945, 3059
BseMI GCAATG 2 cut(s) 751, 2188
BseMII CTCAG 4 cut(s) 1800, 1959, 2901, 3579
BseNI ACTGG 6 cut(s) 1127, 1333, 1595, 2269, 2515, 2869
BseSI GKGCMC 1 cut(s) 1800
BseX3I CGGCCG 3 cut(s) 644, 687, 866
BseXI GCAGC 6 cut(s) 333, 484, 852, 1445, 2769, 3195
BseYI CCCAGC 1 cut(s) 426
BsgI GTGCAG 5 cut(s) 854, 1175, 3048, 3147, 3496
Bsh1236I CGCG 5 cut(s) 8, 590, 649, 710, 871
Bsh1285I CGRYCG 5 cut(s) 295, 647, 690, 762, 869
BshNI GGYRCC 2 cut(s) 722, 3430
BshTI ACCGGT 1 cut(s) 3521
BsiEI CGRYCG 5 cut(s) 295, 647, 690, 762, 869
BsiHKAI GWGCWC 2 cut(s) 1170, 2558
BsiHKCI CYCGRG 1 cut(s) 623
BslFI GGGAC 4 cut(s) 161, 814, 1133, 1585
BslI CCNNNNNNNGG 9 cut(s) 166, 352, 624, 1191, 2294, 2657, 2753, 2945, 3059
BsmAI GTCTC 3 cut(s) 1212, 1964, 2049
BsmFI GGGAC 4 cut(s) 161, 814, 1133, 1585
BsmI GAATGC 3 cut(s) 1404, 2788, 3519
BsoBI CYCGRG 1 cut(s) 623
Bsp119I TTCGAA 1 cut(s) 2257
Bsp1286I GDGCHC 3 cut(s) 1170, 1800, 2558
Bsp143I GATC 7 cut(s) 279, 436, 759, 1197, 1546, 2209, 3484
Bsp19I CCATGG 1 cut(s) 2235
BspCNI CTCAG 4 cut(s) 1799, 1960, 2900, 3578
BspFNI CGCG 5 cut(s) 8, 590, 649, 710, 871
BspHI TCATGA 2 cut(s) 1444, 3493
BspLI GGNNCC 8 cut(s) 357, 564, 724, 915, 1548, 1776, 3432, 3508
BspMI ACCTGC 1 cut(s) 1920
BspPI GGATC 3 cut(s) 274, 1541, 1554
BspQI GCTCTTC 2 cut(s) 482, 2337
BspT104I TTCGAA 1 cut(s) 2257
BspT107I GGYRCC 2 cut(s) 722, 3430
BsrBI CCGCTC 2 cut(s) 297, 433
BsrDI GCAATG 2 cut(s) 751, 2188
BsrFI RCCGGY 8 cut(s) 317, 642, 694, 719, 725, 749, 864, 3521
BsrI ACTGG 6 cut(s) 1127, 1333, 1595, 2269, 2515, 2869
BssAI RCCGGY 8 cut(s) 317, 642, 694, 719, 725, 749, 864, 3521
BssECI CCNNGG 7 cut(s) 588, 666, 820, 869, 2235, 3021, 3553
BssMI GATC 7 cut(s) 279, 436, 759, 1197, 1546, 2209, 3484
BssNI GRCGYC 2 cut(s) 507, 609
BssSI CACGAG 1 cut(s) 440
BssT1I CCWWGG 3 cut(s) 820, 2235, 3021
Bst2BI CACGAG 1 cut(s) 440
Bst2UI CCWGG 3 cut(s) 167, 353, 3554
Bst4CI ACNGT 8 cut(s) 50, 148, 1817, 1885, 2069, 2338, 2800, 3423
Bst6I CTCTTC 6 cut(s) 482, 845, 1052, 1136, 2052, 2337
BstACI GRCGYC 2 cut(s) 507, 609
BstBI TTCGAA 1 cut(s) 2257
BstDEI CTNAG 4 cut(s) 1786, 1968, 2887, 3565
BstDSI CCRYGG 4 cut(s) 588, 666, 869, 2235
BstFNI CGCG 5 cut(s) 8, 590, 649, 710, 871
BstHHI GCGC 3 cut(s) 651, 712, 1087
BstKTI GATC 7 cut(s) 282, 439, 762, 1200, 1549, 2212, 3487
BstMAI GTCTC 3 cut(s) 1212, 1964, 2049
BstMBI GATC 7 cut(s) 279, 436, 759, 1197, 1546, 2209, 3484
BstMCI CGRYCG 5 cut(s) 295, 647, 690, 762, 869
BstNI CCWGG 3 cut(s) 167, 353, 3554
BstNSI RCATGY 3 cut(s) 2106, 2459, 2597
BstSCI CCNGG 4 cut(s) 165, 351, 2544, 3552
BstSFI CTRYAG 5 cut(s) 49, 1884, 2559, 2989, 3584
BstSLI GKGCMC 1 cut(s) 1800
BstUI CGCG 5 cut(s) 8, 590, 649, 710, 871
BstV1I GCAGC 6 cut(s) 333, 484, 852, 1445, 2769, 3195
BstV2I GAAGAC 2 cut(s) 295, 3417
BstX2I RGATCY 1 cut(s) 1546
BstXI CCANNNNNNTGG 1 cut(s) 3143
BstYI RGATCY 1 cut(s) 1546
BstZI CGGCCG 3 cut(s) 644, 687, 866
BsuI GTATCC 1 cut(s) 2518
BtgI CCRYGG 4 cut(s) 588, 666, 869, 2235
BveI ACCTGC 1 cut(s) 1920
CaiI CAGNNNCTG 1 cut(s) 2090
CciI TCATGA 2 cut(s) 1444, 3493
CfoI GCGC 3 cut(s) 651, 712, 1087
Cfr10I RCCGGY 8 cut(s) 317, 642, 694, 719, 725, 749, 864, 3521
Cfr13I GGNCC 3 cut(s) 355, 1964, 2505
Cfr42I CCGCGG 2 cut(s) 591, 872
CseI GACGC 2 cut(s) 598, 1500
Csp6I GTAC 5 cut(s) 63, 541, 2001, 2082, 2262
CspAI ACCGGT 1 cut(s) 3521
CspCI CAANNNNNGTGG 2 cut(s) 1663, 1698
CviQI GTAC 5 cut(s) 63, 541, 2001, 2082, 2262
DdeI CTNAG 4 cut(s) 1786, 1968, 2887, 3565
DpnI GATC 7 cut(s) 281, 438, 761, 1199, 1548, 2211, 3486
DpnII GATC 7 cut(s) 279, 436, 759, 1197, 1546, 2209, 3484
DraI TTTAAA 2 cut(s) 3039, 3069
DrdI GACNNNNNNGTC 2 cut(s) 299, 506
DseDI GACNNNNNNGTC 2 cut(s) 299, 506
EaeI YGGCCR 6 cut(s) 141, 644, 687, 866, 1020, 3404
EagI CGGCCG 3 cut(s) 644, 687, 866
Eam1104I CTCTTC 6 cut(s) 482, 845, 1052, 1136, 2052, 2337
EarI CTCTTC 6 cut(s) 482, 845, 1052, 1136, 2052, 2337
EciI GGCGGA 5 cut(s) 182, 238, 304, 391, 522
Ecl136II GAGCTC 2 cut(s) 1168, 2556
EclXI CGGCCG 3 cut(s) 644, 687, 866
Eco130I CCWWGG 3 cut(s) 820, 2235, 3021
Eco24I GRGCYC 2 cut(s) 1170, 2558
Eco32I GATATC 1 cut(s) 1654
Eco47I GGWCC 1 cut(s) 1964
Eco52I CGGCCG 3 cut(s) 644, 687, 866
Eco53kI GAGCTC 2 cut(s) 1168, 2556
Eco57I CTGAAG 1 cut(s) 1989
Eco88I CYCGRG 1 cut(s) 623
EcoICRI GAGCTC 2 cut(s) 1168, 2556
EcoRII CCWGG 3 cut(s) 165, 351, 3552
EcoRV GATATC 1 cut(s) 1654
EcoT14I CCWWGG 3 cut(s) 820, 2235, 3021
EcoT22I ATGCAT 2 cut(s) 1018, 2599
EcoT38I GRGCYC 2 cut(s) 1170, 2558
ErhI CCWWGG 3 cut(s) 820, 2235, 3021
FalI AAGNNNNNCTT 6 cut(s) 461, 493, 813, 845, 2734, 2766
FaqI GGGAC 4 cut(s) 161, 814, 1133, 1585
FauI CCCGC 1 cut(s) 350
FauNDI CATATG 2 cut(s) 2581, 3364
FblI GTMKAC 3 cut(s) 150, 186, 1887
FriOI GRGCYC 2 cut(s) 1170, 2558
FseI GGCCGGCC 2 cut(s) 646, 868
FspBI CTAG 3 cut(s) 735, 1134, 1878
GlaI GCGC 3 cut(s) 650, 711, 1086
GsaI CCCAGC 1 cut(s) 430
HgaI GACGC 2 cut(s) 598, 1500
HhaI GCGC 3 cut(s) 651, 712, 1087
Hin1I GRCGYC 2 cut(s) 507, 609
Hin6I GCGC 3 cut(s) 649, 710, 1085
HinP1I GCGC 3 cut(s) 649, 710, 1085
HincII GTYRAC 4 cut(s) 151, 187, 1990, 2491
HindII GTYRAC 4 cut(s) 151, 187, 1990, 2491
HpaI GTTAAC 1 cut(s) 2491
HpyCH4III ACNGT 8 cut(s) 50, 148, 1817, 1885, 2069, 2338, 2800, 3423
HpyCH4IV ACGT 3 cut(s) 17, 273, 507
HpyF3I CTNAG 4 cut(s) 1786, 1968, 2887, 3565
HpySE526I ACGT 3 cut(s) 17, 273, 507
Hsp92I GRCGYC 2 cut(s) 507, 609
HspAI GCGC 3 cut(s) 649, 710, 1085
KroI GCCGGC 3 cut(s) 317, 642, 864
KroNI GCCGGC 3 cut(s) 319, 644, 866
KspAI GTTAAC 1 cut(s) 2491
KspI CCGCGG 2 cut(s) 591, 872
Kzo9I GATC 7 cut(s) 279, 436, 759, 1197, 1546, 2209, 3484
LguI GCTCTTC 2 cut(s) 482, 2337
Lsp1109I GCAGC 6 cut(s) 333, 484, 852, 1445, 2769, 3195
LweI GCATC 3 cut(s) 1003, 2606, 3487
MaeI CTAG 3 cut(s) 735, 1134, 1878
MaeII ACGT 3 cut(s) 17, 273, 507
MaeIII GTNAC 2 cut(s) 1172, 2800
MalI GATC 7 cut(s) 281, 438, 761, 1199, 1548, 2211, 3486
MbiI CCGCTC 2 cut(s) 297, 433
MboI GATC 7 cut(s) 279, 436, 759, 1197, 1546, 2209, 3484
MfeI CAATTG 2 cut(s) 2031, 2277
MflI RGATCY 1 cut(s) 1546
MhlI GDGCHC 3 cut(s) 1170, 1800, 2558
MlsI TGGCCA 2 cut(s) 143, 1022
MluI ACGCGT 1 cut(s) 6
MluNI TGGCCA 2 cut(s) 143, 1022
MlyI GAGTC 5 cut(s) 164, 1317, 1963, 2051, 2392
MmeI TCCRAC 2 cut(s) 1053, 1251
Mox20I TGGCCA 2 cut(s) 143, 1022
Mph1103I ATGCAT 2 cut(s) 1018, 2599
MroNI GCCGGC 3 cut(s) 317, 642, 864
MroXI GAANNNNTTC 1 cut(s) 2272
MscI TGGCCA 2 cut(s) 143, 1022
MslI CAYNNNNRTG 1 cut(s) 3039
Msp20I TGGCCA 2 cut(s) 143, 1022
MspA1I CMGCKG 3 cut(s) 590, 871, 3465
MspR9I CCNGG 4 cut(s) 167, 353, 2546, 3554
MunI CAATTG 2 cut(s) 2031, 2277
Mva1269I GAATGC 3 cut(s) 1404, 2788, 3519
MvaI CCWGG 3 cut(s) 167, 353, 3554
MvnI CGCG 5 cut(s) 8, 590, 649, 710, 871
NaeI GCCGGC 3 cut(s) 319, 644, 866
NciI CCSGG 1 cut(s) 2546
NcoI CCATGG 1 cut(s) 2235
NdeI CATATG 2 cut(s) 2581, 3364
NdeII GATC 7 cut(s) 279, 436, 759, 1197, 1546, 2209, 3484
NgoMIV GCCGGC 3 cut(s) 317, 642, 864
NlaIV GGNNCC 8 cut(s) 357, 564, 724, 915, 1548, 1776, 3432, 3508
NmuCI GTSAC 2 cut(s) 1172, 2800
NsiI ATGCAT 2 cut(s) 1018, 2599
NspI RCATGY 3 cut(s) 2106, 2459, 2597
NspV TTCGAA 1 cut(s) 2257
PaeI GCATGC 2 cut(s) 2459, 2597
PagI TCATGA 2 cut(s) 1444, 3493
PciI ACATGT 1 cut(s) 2102
PciSI GCTCTTC 2 cut(s) 482, 2337
PcsI WCGNNNNNNNCGW 3 cut(s) 270, 297, 504
PctI GAATGC 3 cut(s) 1404, 2788, 3519
PdiI GCCGGC 3 cut(s) 319, 644, 866
PdmI GAANNNNTTC 1 cut(s) 2272
PfeI GAWTC 9 cut(s) 311, 490, 614, 656, 2126, 2231, 2323, 3074, 3347
PflFI GACNNNGTC 2 cut(s) 173, 506
PflMI CCANNNNNTGG 4 cut(s) 166, 1191, 2753, 2945
PinAI ACCGGT 1 cut(s) 3521
Ple19I CGATCG 1 cut(s) 762
PleI GAGTC 5 cut(s) 164, 1317, 1962, 2050, 2392
PpsI GAGTC 5 cut(s) 164, 1317, 1962, 2050, 2392
PscI ACATGT 1 cut(s) 2102
PshBI ATTAAT 1 cut(s) 2310
Psp124BI GAGCTC 2 cut(s) 1170, 2558
Psp6I CCWGG 3 cut(s) 165, 351, 3552
PspFI CCCAGC 1 cut(s) 426
PspGI CCWGG 3 cut(s) 165, 351, 3552
PspN4I GGNNCC 8 cut(s) 357, 564, 724, 915, 1548, 1776, 3432, 3508
PspPI GGNCC 3 cut(s) 355, 1964, 2505
PstNI CAGNNNCTG 1 cut(s) 2090
PsuI RGATCY 1 cut(s) 1546
PsyI GACNNNGTC 2 cut(s) 173, 506
PvuI CGATCG 1 cut(s) 762
PvuII CAGCTG 1 cut(s) 3465
RigI GGCCGGCC 2 cut(s) 646, 868
RsaI GTAC 5 cut(s) 64, 542, 2002, 2083, 2263
RsaNI GTAC 5 cut(s) 63, 541, 2001, 2082, 2262
RseI CAYNNNNRTG 1 cut(s) 3039
SacI GAGCTC 2 cut(s) 1170, 2558
SacII CCGCGG 2 cut(s) 591, 872
SalI GTCGAC 2 cut(s) 149, 185
SapI GCTCTTC 2 cut(s) 482, 2337
Sau3AI GATC 7 cut(s) 279, 436, 759, 1197, 1546, 2209, 3484
Sau96I GGNCC 3 cut(s) 355, 1964, 2505
ScaI AGTACT 2 cut(s) 2002, 2263
SchI GAGTC 5 cut(s) 164, 1317, 1963, 2051, 2392
ScrFI CCNGG 4 cut(s) 167, 353, 2546, 3554
SduI GDGCHC 3 cut(s) 1170, 1800, 2558
SfaNI GCATC 3 cut(s) 1003, 2606, 3487
SfcI CTRYAG 5 cut(s) 49, 1884, 2559, 2989, 3584
Sfr303I CCGCGG 2 cut(s) 591, 872
SfuI TTCGAA 1 cut(s) 2257
SgrBI CCGCGG 2 cut(s) 591, 872
SinI GGWCC 1 cut(s) 1964
SmiI ATTTAAAT 1 cut(s) 3039
SmiMI CAYNNNNRTG 1 cut(s) 3039
SmlI CTYRAG 5 cut(s) 467, 1211, 2817, 3324, 3452
SmoI CTYRAG 5 cut(s) 467, 1211, 2817, 3324, 3452
SphI GCATGC 2 cut(s) 2459, 2597
SspI AATATT 3 cut(s) 1363, 1667, 1858
SspMI CTAG 3 cut(s) 735, 1134, 1878
SstI GAGCTC 2 cut(s) 1170, 2558
StyD4I CCNGG 4 cut(s) 165, 351, 2544, 3552
StyI CCWWGG 3 cut(s) 820, 2235, 3021
SwaI ATTTAAAT 1 cut(s) 3039
TaaI ACNGT 8 cut(s) 50, 148, 1817, 1885, 2069, 2338, 2800, 3423
TaiI ACGT 3 cut(s) 20, 276, 510
TatI WGTACW 4 cut(s) 540, 2000, 2081, 2261
TfiI GAWTC 9 cut(s) 311, 490, 614, 656, 2126, 2231, 2323, 3074, 3347
TseFI GTSAC 2 cut(s) 1172, 2800
TseI GCWGC 6 cut(s) 321, 472, 840, 1458, 2757, 3183
Tsp45I GTSAC 2 cut(s) 1172, 2800
TspGWI ACGGA 4 cut(s) 163, 289, 646, 1236
Tth111I GACNNNGTC 2 cut(s) 173, 506
Van91I CCANNNNNTGG 4 cut(s) 166, 1191, 2753, 2945
VpaK11BI GGWCC 1 cut(s) 1964
VspI ATTAAT 1 cut(s) 2310
XapI RAATTY 4 cut(s) 124, 1584, 1693, 2253
XceI RCATGY 3 cut(s) 2106, 2459, 2597
XmiI GTMKAC 3 cut(s) 150, 186, 1887
XmnI GAANNNNTTC 1 cut(s) 2272
XspI CTAG 3 cut(s) 735, 1134, 1878
ZraI GACGTC 1 cut(s) 508
ZrmI AGTACT 2 cut(s) 2002, 2263
Zsp2I ATGCAT 2 cut(s) 1018, 2599
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.