methyl-CpG-binding domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g37120 FvH4_5g37120 FvH4_5g37120 FvH4_5g37120 FvH4_5g37120 FvH4_5g37120 FvH4_5g37120 FvH4_5g37120 FvH4_5g37120 |
| malus_domestica | MD00G1009700.v1.1 MD08G1184300.v1.1 MD15G1370800.v1.1 |
| prunus_persica | Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 |
| pyrus_communis | pycom08g15800 |
| rosa_chinensis | RchiOBHm_Chr7g0238671 RchiOBHm_Chr7g0243951 RchiOBHm_Chr7g0243961 |
| rosa_laevigata | RLG00000000820 |
| rosa_multiflora | Rmu_sc0006110.1_g000008 |
| rosa_roxburghii | Rroxscaffold_3G00221630 |
| rosa_rugosa | Rorug07G0322800 |
| rosa_samantha | Rh7AG477200 Rh7BG448500 Rh7CG495300 Rh7DG462200 |
| rosa_wichuraiana | Rw7G039830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 236 |
| AccII | CGCG | 1 cut(s) | 234 |
| AciI | CCGC | 2 cut(s) | 232, 234 |
| AclWI | GGATC | 1 cut(s) | 241 |
| AcuI | CTGAAG | 1 cut(s) | 270 |
| AgsI | TTSAA | 1 cut(s) | 302 |
| AjnI | CCWGG | 1 cut(s) | 97 |
| AluBI | AGCT | 1 cut(s) | 259 |
| AluI | AGCT | 1 cut(s) | 259 |
| Alw26I | GTCTC | 1 cut(s) | 41 |
| AlwI | GGATC | 1 cut(s) | 241 |
| AoxI | GGCC | 1 cut(s) | 95 |
| BanI | GGYRCC | 1 cut(s) | 236 |
| BccI | CCATC | 4 cut(s) | 8, 101, 178, 184 |
| BciT130I | CCWGG | 1 cut(s) | 99 |
| BcoDI | GTCTC | 1 cut(s) | 41 |
| BfaI | CTAG | 1 cut(s) | 310 |
| BisI | GCNGC | 1 cut(s) | 232 |
| BlsI | GCNGC | 1 cut(s) | 233 |
| Bme1390I | CCNGG | 1 cut(s) | 99 |
| BmiI | GGNNCC | 1 cut(s) | 238 |
| BmrFI | CCNGG | 1 cut(s) | 99 |
| BsaI | GGTCTC | 1 cut(s) | 41 |
| BsaJI | CCNNGG | 1 cut(s) | 232 |
| Bse118I | RCCGGY | 1 cut(s) | 93 |
| BseBI | CCWGG | 1 cut(s) | 99 |
| BseDI | CCNNGG | 1 cut(s) | 232 |
| BseGI | GGATG | 2 cut(s) | 19, 189 |
| BseMII | CTCAG | 2 cut(s) | 91, 188 |
| BseYI | CCCAGC | 1 cut(s) | 89 |
| Bsh1236I | CGCG | 1 cut(s) | 234 |
| BshFI | GGCC | 1 cut(s) | 97 |
| BshNI | GGYRCC | 1 cut(s) | 236 |
| BsiSI | CCGG | 1 cut(s) | 94 |
| BsmAI | GTCTC | 1 cut(s) | 41 |
| BsnI | GGCC | 1 cut(s) | 97 |
| Bso31I | GGTCTC | 1 cut(s) | 41 |
| Bsp143I | GATC | 5 cut(s) | 37, 42, 58, 80, 246 |
| BspACI | CCGC | 2 cut(s) | 232, 234 |
| BspANI | GGCC | 1 cut(s) | 97 |
| BspCNI | CTCAG | 2 cut(s) | 90, 189 |
| BspFNI | CGCG | 1 cut(s) | 234 |
| BspLI | GGNNCC | 1 cut(s) | 238 |
| BspPI | GGATC | 1 cut(s) | 241 |
| BspT107I | GGYRCC | 1 cut(s) | 236 |
| BspTNI | GGTCTC | 1 cut(s) | 41 |
| BsrFI | RCCGGY | 1 cut(s) | 93 |
| BssAI | RCCGGY | 1 cut(s) | 93 |
| BssECI | CCNNGG | 1 cut(s) | 232 |
| BssMI | GATC | 5 cut(s) | 37, 42, 58, 80, 246 |
| Bst2UI | CCWGG | 1 cut(s) | 99 |
| Bst4CI | ACNGT | 1 cut(s) | 140 |
| BstC8I | GCNNGC | 1 cut(s) | 95 |
| BstDEI | CTNAG | 2 cut(s) | 77, 197 |
| BstDSI | CCRYGG | 1 cut(s) | 232 |
| BstF5I | GGATG | 2 cut(s) | 19, 189 |
| BstFNI | CGCG | 1 cut(s) | 234 |
| BstKTI | GATC | 5 cut(s) | 40, 45, 61, 83, 249 |
| BstMAI | GTCTC | 1 cut(s) | 41 |
| BstMBI | GATC | 5 cut(s) | 37, 42, 58, 80, 246 |
| BstNI | CCWGG | 1 cut(s) | 99 |
| BstSCI | CCNGG | 1 cut(s) | 97 |
| BstUI | CGCG | 1 cut(s) | 234 |
| BsuRI | GGCC | 1 cut(s) | 97 |
| BtgI | CCRYGG | 1 cut(s) | 232 |
| BtsCI | GGATG | 2 cut(s) | 19, 189 |
| Cac8I | GCNNGC | 1 cut(s) | 95 |
| Cfr10I | RCCGGY | 1 cut(s) | 93 |
| Cfr42I | CCGCGG | 1 cut(s) | 235 |
| CviAII | CATG | 3 cut(s) | 10, 209, 271 |
| CviJI | RGCY | 6 cut(s) | 93, 97, 111, 207, 231, 259 |
| CviKI_1 | RGCY | 6 cut(s) | 93, 97, 111, 207, 231, 259 |
| DdeI | CTNAG | 2 cut(s) | 77, 197 |
| DpnI | GATC | 5 cut(s) | 39, 44, 60, 82, 248 |
| DpnII | GATC | 5 cut(s) | 37, 42, 58, 80, 246 |
| Eco31I | GGTCTC | 1 cut(s) | 41 |
| Eco57I | CTGAAG | 1 cut(s) | 270 |
| EcoRII | CCWGG | 1 cut(s) | 97 |
| FaeI | CATG | 3 cut(s) | 13, 212, 274 |
| FaiI | YATR | 6 cut(s) | 11, 54, 115, 210, 272, 282 |
| FatI | CATG | 3 cut(s) | 9, 208, 270 |
| Fnu4HI | GCNGC | 1 cut(s) | 232 |
| FokI | GGATG | 2 cut(s) | 26, 196 |
| Fsp4HI | GCNGC | 1 cut(s) | 232 |
| FspBI | CTAG | 1 cut(s) | 310 |
| GluI | GCNGC | 1 cut(s) | 232 |
| GsaI | CCCAGC | 1 cut(s) | 93 |
| HaeIII | GGCC | 1 cut(s) | 97 |
| HapII | CCGG | 1 cut(s) | 94 |
| Hin1II | CATG | 3 cut(s) | 13, 212, 274 |
| HpaII | CCGG | 1 cut(s) | 94 |
| Hpy188I | TCNGA | 4 cut(s) | 42, 80, 198, 251 |
| Hpy188III | TCNNGA | 5 cut(s) | 46, 65, 130, 155, 226 |
| HpyAV | CCTTC | 1 cut(s) | 12 |
| HpyCH4III | ACNGT | 1 cut(s) | 140 |
| HpyCH4V | TGCA | 1 cut(s) | 163 |
| HpyF3I | CTNAG | 2 cut(s) | 77, 197 |
| Hsp92II | CATG | 3 cut(s) | 13, 212, 274 |
| KroI | GCCGGC | 1 cut(s) | 93 |
| KroNI | GCCGGC | 1 cut(s) | 95 |
| KspI | CCGCGG | 1 cut(s) | 235 |
| Kzo9I | GATC | 5 cut(s) | 37, 42, 58, 80, 246 |
| LpnPI | CCDG | 8 cut(s) | 84, 103, 107, 111, 115, 239, 245, 273 |
| MaeI | CTAG | 1 cut(s) | 310 |
| MalI | GATC | 5 cut(s) | 39, 44, 60, 82, 248 |
| MboI | GATC | 5 cut(s) | 37, 42, 58, 80, 246 |
| MboII | GAAGA | 4 cut(s) | 16, 47, 53, 259 |
| MluCI | AATT | 1 cut(s) | 305 |
| MnlI | CCTC | 4 cut(s) | 163, 174, 192, 285 |
| MroNI | GCCGGC | 1 cut(s) | 93 |
| MspA1I | CMGCKG | 1 cut(s) | 234 |
| MspI | CCGG | 1 cut(s) | 94 |
| MspR9I | CCNGG | 1 cut(s) | 99 |
| MvaI | CCWGG | 1 cut(s) | 99 |
| MvnI | CGCG | 1 cut(s) | 234 |
| NaeI | GCCGGC | 1 cut(s) | 95 |
| NdeII | GATC | 5 cut(s) | 37, 42, 58, 80, 246 |
| NgoMIV | GCCGGC | 1 cut(s) | 93 |
| NlaIII | CATG | 3 cut(s) | 13, 212, 274 |
| NlaIV | GGNNCC | 1 cut(s) | 238 |
| PdiI | GCCGGC | 1 cut(s) | 95 |
| PkrI | GCNGC | 1 cut(s) | 233 |
| Psp6I | CCWGG | 1 cut(s) | 97 |
| PspFI | CCCAGC | 1 cut(s) | 89 |
| PspGI | CCWGG | 1 cut(s) | 97 |
| PspN4I | GGNNCC | 1 cut(s) | 238 |
| SacII | CCGCGG | 1 cut(s) | 235 |
| SatI | GCNGC | 1 cut(s) | 232 |
| Sau3AI | GATC | 5 cut(s) | 37, 42, 58, 80, 246 |
| ScrFI | CCNGG | 1 cut(s) | 99 |
| SetI | ASST | 5 cut(s) | 174, 203, 218, 261, 292 |
| Sfr303I | CCGCGG | 1 cut(s) | 235 |
| SgrBI | CCGCGG | 1 cut(s) | 235 |
| Sse9I | AATT | 1 cut(s) | 305 |
| SsiI | CCGC | 2 cut(s) | 232, 234 |
| SspMI | CTAG | 1 cut(s) | 310 |
| StyD4I | CCNGG | 1 cut(s) | 97 |
| TaaI | ACNGT | 1 cut(s) | 140 |
| TaqI | TCGA | 4 cut(s) | 33, 45, 83, 277 |
| TasI | AATT | 1 cut(s) | 305 |
| TauI | GCSGC | 1 cut(s) | 234 |
| TspDTI | ATGAA | 3 cut(s) | 17, 225, 259 |
| XspI | CTAG | 1 cut(s) | 310 |