methyl-CpG-binding domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g37120 FvH4_5g37120 FvH4_5g37120 FvH4_5g37120 FvH4_5g37120 FvH4_5g37120 FvH4_5g37120 FvH4_5g37120 FvH4_5g37120 |
| malus_domestica | MD00G1009700.v1.1 MD08G1184300.v1.1 MD15G1370800.v1.1 |
| prunus_persica | Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 |
| pyrus_communis | pycom08g15800 |
| rosa_chinensis | RchiOBHm_Chr7g0238671 RchiOBHm_Chr7g0243951 RchiOBHm_Chr7g0243961 |
| rosa_laevigata | RLG00000000820 |
| rosa_multiflora | Rmu_sc0006110.1_g000008 |
| rosa_roxburghii | Rroxscaffold_3G00221630 |
| rosa_rugosa | Rorug07G0322800 |
| rosa_samantha | Rh7AG477200 Rh7BG448500 Rh7CG495300 Rh7DG462200 |
| rosa_wichuraiana | Rw7G039830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2222 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 410 |
| AatII | GACGTC | 1 cut(s) | 1403 |
| Acc36I | ACCTGC | 2 cut(s) | 1259, 1890 |
| AccB1I | GGYRCC | 1 cut(s) | 2552 |
| AccBSI | CCGCTC | 1 cut(s) | 76 |
| AccI | GTMKAC | 3 cut(s) | 21, 1039, 1904 |
| AccII | CGCG | 3 cut(s) | 244, 661, 1127 |
| AclWI | GGATC | 1 cut(s) | 2810 |
| AcoI | YGGCCR | 2 cut(s) | 656, 2173 |
| AcsI | RAATTY | 4 cut(s) | 1321, 1332, 1367, 1753 |
| AcuI | CTGAAG | 1 cut(s) | 1998 |
| AcyI | GRCGYC | 2 cut(s) | 789, 1400 |
| AfaI | GTAC | 3 cut(s) | 408, 1951, 1972 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 159, 2825, 3112 |
| AflIII | ACRYGT | 2 cut(s) | 1125, 2060 |
| AjnI | CCWGG | 5 cut(s) | 1135, 2548, 2725, 3052, 3321 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1506, 1538 |
| Alw21I | GWGCWC | 2 cut(s) | 963, 2804 |
| Alw26I | GTCTC | 6 cut(s) | 324, 418, 863, 1034, 2019, 3218 |
| AlwI | GGATC | 1 cut(s) | 2810 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2684 |
| Ama87I | CYCGRG | 1 cut(s) | 327 |
| AoxI | GGCC | 9 cut(s) | 3, 481, 517, 652, 656, 1018, 2173, 3218, 3324 |
| ApeKI | GCWGC | 8 cut(s) | 806, 1063, 2169, 2421, 2760, 2776, 2952, 3314 |
| ApoI | RAATTY | 4 cut(s) | 1321, 1332, 1367, 1753 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 774, 806, 815, 847, 3113, 3145 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1422, 2236 |
| AspLEI | GCGC | 5 cut(s) | 246, 491, 880, 1493, 3094 |
| AspS9I | GGNCC | 3 cut(s) | 455, 1934, 2546 |
| AsuC2I | CCSGG | 2 cut(s) | 453, 612 |
| AsuHPI | GGTGA | 5 cut(s) | 44, 574, 781, 787, 1703 |
| AvaI | CYCGRG | 1 cut(s) | 327 |
| AvaII | GGWCC | 3 cut(s) | 455, 1934, 2546 |
| AxyI | CCTNAGG | 1 cut(s) | 1938 |
| BaeGI | GKGCMC | 1 cut(s) | 3286 |
| BanI | GGYRCC | 1 cut(s) | 2552 |
| BanII | GRGCYC | 2 cut(s) | 963, 2804 |
| BbsI | GAAGAC | 1 cut(s) | 196 |
| Bbv12I | GWGCWC | 2 cut(s) | 963, 2804 |
| BbvCI | CCTCAGC | 1 cut(s) | 485 |
| BbvI | GCAGC | 8 cut(s) | 793, 1075, 2181, 2433, 2772, 2788, 2939, 3326 |
| BceAI | ACGGC | 4 cut(s) | 504, 527, 652, 802 |
| BciT130I | CCWGG | 5 cut(s) | 1137, 2550, 2727, 3054, 3323 |
| BciVI | GTATCC | 1 cut(s) | 1195 |
| BcnI | CCSGG | 2 cut(s) | 453, 612 |
| BcoDI | GTCTC | 6 cut(s) | 324, 418, 863, 1034, 2019, 3218 |
| BfaI | CTAG | 5 cut(s) | 887, 2046, 2432, 2805, 2850 |
| BfmI | CTRYAG | 3 cut(s) | 1036, 1394, 2083 |
| BfoI | RGCGCY | 1 cut(s) | 492 |
| BfuAI | ACCTGC | 2 cut(s) | 1259, 1890 |
| BfuI | GTATCC | 1 cut(s) | 1195 |
| BglI | GCCNNNNNGGC | 3 cut(s) | 548, 1577, 3323 |
| BglII | AGATCT | 2 cut(s) | 1597, 2498 |
| BlpI | GCTNAGC | 1 cut(s) | 2868 |
| BmcAI | AGTACT | 1 cut(s) | 1972 |
| Bme1390I | CCNGG | 7 cut(s) | 453, 612, 1137, 2550, 2727, 3054, 3323 |
| Bme18I | GGWCC | 3 cut(s) | 455, 1934, 2546 |
| BmeT110I | CYCGRG | 1 cut(s) | 327 |
| BmgT120I | GGNCC | 3 cut(s) | 455, 1934, 2546 |
| BmiI | GGNNCC | 2 cut(s) | 457, 2554 |
| BmrFI | CCNGG | 7 cut(s) | 453, 612, 1137, 2550, 2727, 3054, 3323 |
| BmrI | ACTGGG | 1 cut(s) | 2583 |
| BmsI | GCATC | 5 cut(s) | 523, 958, 1441, 1867, 2185 |
| BmuI | ACTGGG | 1 cut(s) | 2583 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2535 |
| BpiI | GAAGAC | 1 cut(s) | 196 |
| BpmI | CTGGAG | 1 cut(s) | 1203 |
| Bpu10I | CCTNAGC | 2 cut(s) | 485, 2253 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2868 |
| BpuEI | CTTGAG | 3 cut(s) | 989, 2443, 3319 |
| BpuMI | CCSGG | 2 cut(s) | 453, 612 |
| BsaAI | YACGTR | 1 cut(s) | 527 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2204 |
| BsaHI | GRCGYC | 2 cut(s) | 789, 1400 |
| BsaI | GGTCTC | 1 cut(s) | 324 |
| BsaJI | CCNNGG | 3 cut(s) | 977, 2725, 3111 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 50, 80, 104, 134, 1008, 1038 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 159, 2825, 3112 |
| Bse118I | RCCGGY | 3 cut(s) | 159, 218, 654 |
| Bse1I | ACTGG | 9 cut(s) | 1288, 1390, 2233, 2313, 2395, 2578, 2644, 2830, 3295 |
| Bse21I | CCTNAGG | 1 cut(s) | 1938 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2204 |
| BseBI | CCWGG | 5 cut(s) | 1137, 2550, 2727, 3054, 3323 |
| BseDI | CCNNGG | 3 cut(s) | 977, 2725, 3111 |
| BseJI | GATNNNNATC | 1 cut(s) | 2204 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 159, 2825, 3112 |
| BseMII | CTCAG | 8 cut(s) | 499, 684, 1812, 1929, 2267, 2667, 2859, 3213 |
| BseNI | ACTGG | 9 cut(s) | 1288, 1390, 2233, 2313, 2395, 2578, 2644, 2830, 3295 |
| BseRI | GAGGAG | 8 cut(s) | 83, 124, 127, 370, 770, 862, 865, 2501 |
| BseSI | GKGCMC | 1 cut(s) | 3286 |
| BseX3I | CGGCCG | 1 cut(s) | 656 |
| BseXI | GCAGC | 8 cut(s) | 793, 1075, 2181, 2433, 2772, 2788, 2939, 3326 |
| BseYI | CCCAGC | 1 cut(s) | 3278 |
| BsgI | GTGCAG | 3 cut(s) | 968, 3009, 3333 |
| Bsh1236I | CGCG | 3 cut(s) | 244, 661, 1127 |
| Bsh1285I | CGRYCG | 1 cut(s) | 659 |
| BshFI | GGCC | 9 cut(s) | 5, 483, 519, 654, 658, 1020, 2175, 3220, 3326 |
| BshNI | GGYRCC | 1 cut(s) | 2552 |
| BsiEI | CGRYCG | 1 cut(s) | 659 |
| BsiHKAI | GWGCWC | 2 cut(s) | 963, 2804 |
| BsiHKCI | CYCGRG | 1 cut(s) | 327 |
| BsiSI | CCGG | 5 cut(s) | 160, 219, 453, 612, 655 |
| BslFI | GGGAC | 1 cut(s) | 404 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 159, 2825, 3112 |
| BsmAI | GTCTC | 6 cut(s) | 324, 418, 863, 1034, 2019, 3218 |
| BsmBI | CGTCTC | 2 cut(s) | 418, 863 |
| BsmFI | GGGAC | 1 cut(s) | 404 |
| BsmI | GAATGC | 2 cut(s) | 823, 2797 |
| BsnI | GGCC | 9 cut(s) | 5, 483, 519, 654, 658, 1020, 2175, 3220, 3326 |
| Bso31I | GGTCTC | 1 cut(s) | 324 |
| BsoBI | CYCGRG | 1 cut(s) | 327 |
| Bsp1286I | GDGCHC | 3 cut(s) | 963, 2804, 3286 |
| Bsp143I | GATC | 6 cut(s) | 106, 193, 1597, 2205, 2498, 2815 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2868 |
| BspANI | GGCC | 9 cut(s) | 5, 483, 519, 654, 658, 1020, 2175, 3220, 3326 |
| BspCNI | CTCAG | 8 cut(s) | 498, 685, 1813, 1930, 2266, 2666, 2860, 3214 |
| BspFNI | CGCG | 3 cut(s) | 244, 661, 1127 |
| BspHI | TCATGA | 3 cut(s) | 1288, 1414, 3262 |
| BspLI | GGNNCC | 2 cut(s) | 457, 2554 |
| BspMAI | CTGCAG | 1 cut(s) | 1398 |
| BspMI | ACCTGC | 2 cut(s) | 1259, 1890 |
| BspPI | GGATC | 1 cut(s) | 2810 |
| BspT107I | GGYRCC | 1 cut(s) | 2552 |
| BspTNI | GGTCTC | 1 cut(s) | 324 |
| BsrBI | CCGCTC | 1 cut(s) | 76 |
| BsrFI | RCCGGY | 3 cut(s) | 159, 218, 654 |
| BsrI | ACTGG | 9 cut(s) | 1288, 1390, 2233, 2313, 2395, 2578, 2644, 2830, 3295 |
| BssAI | RCCGGY | 3 cut(s) | 159, 218, 654 |
| BssECI | CCNNGG | 3 cut(s) | 977, 2725, 3111 |
| BssMI | GATC | 6 cut(s) | 106, 193, 1597, 2205, 2498, 2815 |
| BssNI | GRCGYC | 2 cut(s) | 789, 1400 |
| BssT1I | CCWWGG | 1 cut(s) | 3111 |
| Bst2UI | CCWGG | 5 cut(s) | 1137, 2550, 2727, 3054, 3323 |
| Bst4CI | ACNGT | 2 cut(s) | 16, 1855 |
| Bst6I | CTCTTC | 4 cut(s) | 377, 732, 929, 1037 |
| BstACI | GRCGYC | 2 cut(s) | 789, 1400 |
| BstBAI | YACGTR | 1 cut(s) | 527 |
| BstFNI | CGCG | 3 cut(s) | 244, 661, 1127 |
| BstH2I | RGCGCY | 1 cut(s) | 492 |
| BstHHI | GCGC | 5 cut(s) | 246, 491, 880, 1493, 3094 |
| BstKTI | GATC | 6 cut(s) | 109, 196, 1600, 2208, 2501, 2818 |
| BstMAI | GTCTC | 6 cut(s) | 324, 418, 863, 1034, 2019, 3218 |
| BstMBI | GATC | 6 cut(s) | 106, 193, 1597, 2205, 2498, 2815 |
| BstMCI | CGRYCG | 1 cut(s) | 659 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 548, 636, 655, 1577, 1664, 2418, 2996, 3199, 3323 |
| BstNI | CCWGG | 5 cut(s) | 1137, 2550, 2727, 3054, 3323 |
| BstNSI | RCATGY | 3 cut(s) | 1360, 2064, 2219 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2535 |
| BstSCI | CCNGG | 7 cut(s) | 451, 610, 1135, 2548, 2725, 3052, 3321 |
| BstSFI | CTRYAG | 3 cut(s) | 1036, 1394, 2083 |
| BstSLI | GKGCMC | 1 cut(s) | 3286 |
| BstUI | CGCG | 3 cut(s) | 244, 661, 1127 |
| BstV1I | GCAGC | 8 cut(s) | 793, 1075, 2181, 2433, 2772, 2788, 2939, 3326 |
| BstV2I | GAAGAC | 1 cut(s) | 196 |
| BstX2I | RGATCY | 2 cut(s) | 1597, 2498 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2852, 2909 |
| BstYI | RGATCY | 2 cut(s) | 1597, 2498 |
| BstZI | CGGCCG | 1 cut(s) | 656 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1938 |
| BsuI | GTATCC | 1 cut(s) | 1195 |
| BsuRI | GGCC | 9 cut(s) | 5, 483, 519, 654, 658, 1020, 2175, 3220, 3326 |
| BtgZI | GCGATG | 1 cut(s) | 2213 |
| BtsI | GCAGTG | 3 cut(s) | 637, 989, 2419 |
| BtsIMutI | CAGTG | 9 cut(s) | 637, 989, 1779, 2215, 2306, 2419, 2571, 2637, 2661 |
| BveI | ACCTGC | 2 cut(s) | 1259, 1890 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2684 |
| CciI | TCATGA | 3 cut(s) | 1288, 1414, 3262 |
| CfoI | GCGC | 5 cut(s) | 246, 491, 880, 1493, 3094 |
| Cfr10I | RCCGGY | 3 cut(s) | 159, 218, 654 |
| Cfr13I | GGNCC | 3 cut(s) | 455, 1934, 2546 |
| CseI | GACGC | 3 cut(s) | 778, 1116, 2031 |
| CsiI | ACCWGGT | 3 cut(s) | 1135, 2548, 3052 |
| Csp6I | GTAC | 3 cut(s) | 407, 1950, 1971 |
| CviQI | GTAC | 3 cut(s) | 407, 1950, 1971 |
| DpnI | GATC | 6 cut(s) | 108, 195, 1599, 2207, 2500, 2817 |
| DpnII | GATC | 6 cut(s) | 106, 193, 1597, 2205, 2498, 2815 |
| DraI | TTTAAA | 1 cut(s) | 1794 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 410 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 410 |
| EaeI | YGGCCR | 2 cut(s) | 656, 2173 |
| EagI | CGGCCG | 1 cut(s) | 656 |
| Eam1104I | CTCTTC | 4 cut(s) | 377, 732, 929, 1037 |
| EarI | CTCTTC | 4 cut(s) | 377, 732, 929, 1037 |
| EciI | GGCGGA | 5 cut(s) | 77, 205, 239, 776, 1673 |
| Ecl136II | GAGCTC | 2 cut(s) | 961, 2802 |
| EclXI | CGGCCG | 1 cut(s) | 656 |
| Eco130I | CCWWGG | 1 cut(s) | 3111 |
| Eco147I | AGGCCT | 1 cut(s) | 3220 |
| Eco24I | GRGCYC | 2 cut(s) | 963, 2804 |
| Eco31I | GGTCTC | 1 cut(s) | 324 |
| Eco32I | GATATC | 1 cut(s) | 1510 |
| Eco47I | GGWCC | 3 cut(s) | 455, 1934, 2546 |
| Eco52I | CGGCCG | 1 cut(s) | 656 |
| Eco53kI | GAGCTC | 2 cut(s) | 961, 2802 |
| Eco57I | CTGAAG | 1 cut(s) | 1998 |
| Eco81I | CCTNAGG | 1 cut(s) | 1938 |
| Eco88I | CYCGRG | 1 cut(s) | 327 |
| EcoICRI | GAGCTC | 2 cut(s) | 961, 2802 |
| EcoRI | GAATTC | 1 cut(s) | 1753 |
| EcoRII | CCWGG | 5 cut(s) | 1135, 2548, 2725, 3052, 3321 |
| EcoRV | GATATC | 1 cut(s) | 1510 |
| EcoT14I | CCWWGG | 1 cut(s) | 3111 |
| EcoT38I | GRGCYC | 2 cut(s) | 963, 2804 |
| ErhI | CCWWGG | 1 cut(s) | 3111 |
| Esp3I | CGTCTC | 2 cut(s) | 418, 863 |
| FaqI | GGGAC | 1 cut(s) | 404 |
| FauI | CCCGC | 4 cut(s) | 81, 164, 350, 2013 |
| FauNDI | CATATG | 1 cut(s) | 3133 |
| FblI | GTMKAC | 3 cut(s) | 21, 1039, 1904 |
| FriOI | GRGCYC | 2 cut(s) | 963, 2804 |
| FseI | GGCCGGCC | 1 cut(s) | 658 |
| FspBI | CTAG | 5 cut(s) | 887, 2046, 2432, 2805, 2850 |
| GlaI | GCGC | 5 cut(s) | 245, 490, 879, 1492, 3093 |
| GsaI | CCCAGC | 1 cut(s) | 3282 |
| GsuI | CTGGAG | 1 cut(s) | 1203 |
| HaeII | RGCGCY | 1 cut(s) | 492 |
| HaeIII | GGCC | 9 cut(s) | 5, 483, 519, 654, 658, 1020, 2175, 3220, 3326 |
| HapII | CCGG | 5 cut(s) | 160, 219, 453, 612, 655 |
| HgaI | GACGC | 3 cut(s) | 778, 1116, 2031 |
| HhaI | GCGC | 5 cut(s) | 246, 491, 880, 1493, 3094 |
| Hin1I | GRCGYC | 2 cut(s) | 789, 1400 |
| Hin6I | GCGC | 5 cut(s) | 244, 489, 878, 1491, 3092 |
| HinP1I | GCGC | 5 cut(s) | 244, 489, 878, 1491, 3092 |
| HincII | GTYRAC | 3 cut(s) | 22, 1650, 2352 |
| HindII | GTYRAC | 3 cut(s) | 22, 1650, 2352 |
| HpaII | CCGG | 5 cut(s) | 160, 219, 453, 612, 655 |
| HphI | GGTGA | 5 cut(s) | 44, 574, 781, 787, 1703 |
| Hpy99I | CGWCG | 9 cut(s) | 20, 23, 170, 173, 176, 404, 407, 482, 794 |
| HpyCH4III | ACNGT | 2 cut(s) | 16, 1855 |
| HpyCH4IV | ACGT | 8 cut(s) | 174, 405, 526, 573, 714, 1400, 1813, 2768 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 548, 636, 655, 1577, 1664, 2418, 2996, 3199, 3323 |
| HpySE526I | ACGT | 8 cut(s) | 174, 405, 526, 573, 714, 1400, 1813, 2768 |
| Hsp92I | GRCGYC | 2 cut(s) | 789, 1400 |
| HspAI | GCGC | 5 cut(s) | 244, 489, 878, 1491, 3092 |
| KroI | GCCGGC | 2 cut(s) | 218, 654 |
| KroNI | GCCGGC | 2 cut(s) | 220, 656 |
| Kzo9I | GATC | 6 cut(s) | 106, 193, 1597, 2205, 2498, 2815 |
| LmnI | GCTCC | 5 cut(s) | 262, 966, 2773, 2996, 3107 |
| Lsp1109I | GCAGC | 8 cut(s) | 793, 1075, 2181, 2433, 2772, 2788, 2939, 3326 |
| LweI | GCATC | 5 cut(s) | 523, 958, 1441, 1867, 2185 |
| MabI | ACCWGGT | 3 cut(s) | 1135, 2548, 3052 |
| MaeI | CTAG | 5 cut(s) | 887, 2046, 2432, 2805, 2850 |
| MaeII | ACGT | 8 cut(s) | 174, 405, 526, 573, 714, 1400, 1813, 2768 |
| MaeIII | GTNAC | 4 cut(s) | 632, 730, 1765, 1925 |
| MalI | GATC | 6 cut(s) | 108, 195, 1599, 2207, 2500, 2817 |
| MbiI | CCGCTC | 1 cut(s) | 76 |
| MboI | GATC | 6 cut(s) | 106, 193, 1597, 2205, 2498, 2815 |
| MflI | RGATCY | 2 cut(s) | 1597, 2498 |
| MhlI | GDGCHC | 3 cut(s) | 963, 2804, 3286 |
| MluI | ACGCGT | 1 cut(s) | 1125 |
| MlyI | GAGTC | 6 cut(s) | 59, 437, 1125, 1933, 2021, 2907 |
| MmeI | TCCRAC | 5 cut(s) | 846, 885, 1219, 2050, 2640 |
| MroNI | GCCGGC | 2 cut(s) | 218, 654 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1422, 2236 |
| MseI | TTAA | 9 cut(s) | 1629, 1793, 1844, 2279, 2364, 2493, 2688, 2696, 3002 |
| MslI | CAYNNNNRTG | 2 cut(s) | 594, 1146 |
| MspA1I | CMGCKG | 1 cut(s) | 2172 |
| MspI | CCGG | 5 cut(s) | 160, 219, 453, 612, 655 |
| MspR9I | CCNGG | 7 cut(s) | 453, 612, 1137, 2550, 2727, 3054, 3323 |
| Mva1269I | GAATGC | 2 cut(s) | 823, 2797 |
| MvaI | CCWGG | 5 cut(s) | 1137, 2550, 2727, 3054, 3323 |
| MvnI | CGCG | 3 cut(s) | 244, 661, 1127 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 548, 636, 655, 1577, 1664, 2418, 2996, 3199, 3323 |
| NaeI | GCCGGC | 2 cut(s) | 220, 656 |
| NciI | CCSGG | 2 cut(s) | 453, 612 |
| NdeI | CATATG | 1 cut(s) | 3133 |
| NdeII | GATC | 6 cut(s) | 106, 193, 1597, 2205, 2498, 2815 |
| NgoMIV | GCCGGC | 2 cut(s) | 218, 654 |
| NlaIV | GGNNCC | 2 cut(s) | 457, 2554 |
| NmeAIII | GCCGAG | 2 cut(s) | 1002, 1996 |
| NmuCI | GTSAC | 3 cut(s) | 632, 730, 1925 |
| NspI | RCATGY | 3 cut(s) | 1360, 2064, 2219 |
| PaeI | GCATGC | 1 cut(s) | 1360 |
| PagI | TCATGA | 3 cut(s) | 1288, 1414, 3262 |
| PceI | AGGCCT | 1 cut(s) | 3220 |
| PciI | ACATGT | 1 cut(s) | 2060 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 171, 408, 438, 786 |
| PctI | GAATGC | 2 cut(s) | 823, 2797 |
| PdiI | GCCGGC | 2 cut(s) | 220, 656 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1422, 2236 |
| PfoI | TCCNGGA | 1 cut(s) | 451 |
| PleI | GAGTC | 6 cut(s) | 59, 437, 1124, 1932, 2020, 2907 |
| PpsI | GAGTC | 6 cut(s) | 59, 437, 1124, 1932, 2020, 2907 |
| Ppu21I | YACGTR | 1 cut(s) | 527 |
| PscI | ACATGT | 1 cut(s) | 2060 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2535 |
| PsiI | TTATAA | 1 cut(s) | 2222 |
| Psp124BI | GAGCTC | 2 cut(s) | 963, 2804 |
| Psp6I | CCWGG | 5 cut(s) | 1135, 2548, 2725, 3052, 3321 |
| PspFI | CCCAGC | 1 cut(s) | 3278 |
| PspGI | CCWGG | 5 cut(s) | 1135, 2548, 2725, 3052, 3321 |
| PspN4I | GGNNCC | 2 cut(s) | 457, 2554 |
| PspPI | GGNCC | 3 cut(s) | 455, 1934, 2546 |
| PstI | CTGCAG | 1 cut(s) | 1398 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2684 |
| PsuI | RGATCY | 2 cut(s) | 1597, 2498 |
| RigI | GGCCGGCC | 1 cut(s) | 658 |
| RsaI | GTAC | 3 cut(s) | 408, 1951, 1972 |
| RsaNI | GTAC | 3 cut(s) | 407, 1950, 1971 |
| RseI | CAYNNNNRTG | 2 cut(s) | 594, 1146 |
| SacI | GAGCTC | 2 cut(s) | 963, 2804 |
| SalI | GTCGAC | 1 cut(s) | 20 |
| SaqAI | TTAA | 9 cut(s) | 1629, 1793, 1844, 2279, 2364, 2493, 2688, 2696, 3002 |
| Sau3AI | GATC | 6 cut(s) | 106, 193, 1597, 2205, 2498, 2815 |
| Sau96I | GGNCC | 3 cut(s) | 455, 1934, 2546 |
| ScaI | AGTACT | 1 cut(s) | 1972 |
| SchI | GAGTC | 6 cut(s) | 59, 437, 1125, 1933, 2021, 2907 |
| ScrFI | CCNGG | 7 cut(s) | 453, 612, 1137, 2550, 2727, 3054, 3323 |
| SduI | GDGCHC | 3 cut(s) | 963, 2804, 3286 |
| SexAI | ACCWGGT | 3 cut(s) | 1135, 2548, 3052 |
| SfaNI | GCATC | 5 cut(s) | 523, 958, 1441, 1867, 2185 |
| SfcI | CTRYAG | 3 cut(s) | 1036, 1394, 2083 |
| SinI | GGWCC | 3 cut(s) | 455, 1934, 2546 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 594, 1146 |
| SmlI | CTYRAG | 3 cut(s) | 1004, 2458, 3334 |
| SmoI | CTYRAG | 3 cut(s) | 1004, 2458, 3334 |
| SphI | GCATGC | 1 cut(s) | 1360 |
| SseBI | AGGCCT | 1 cut(s) | 3220 |
| SspI | AATATT | 2 cut(s) | 1210, 1828 |
| SspMI | CTAG | 5 cut(s) | 887, 2046, 2432, 2805, 2850 |
| SstI | GAGCTC | 2 cut(s) | 963, 2804 |
| StuI | AGGCCT | 1 cut(s) | 3220 |
| StyD4I | CCNGG | 7 cut(s) | 451, 610, 1135, 2548, 2725, 3052, 3321 |
| StyI | CCWWGG | 1 cut(s) | 3111 |
| TaaI | ACNGT | 2 cut(s) | 16, 1855 |
| TaiI | ACGT | 8 cut(s) | 177, 408, 529, 576, 717, 1403, 1816, 2771 |
| TaqI | TCGA | 9 cut(s) | 21, 63, 81, 165, 578, 710, 725, 920, 1512 |
| TatI | WGTACW | 2 cut(s) | 1949, 1970 |
| TauI | GCSGC | 2 cut(s) | 661, 2175 |
| Tru1I | TTAA | 9 cut(s) | 1629, 1793, 1844, 2279, 2364, 2493, 2688, 2696, 3002 |
| Tru9I | TTAA | 9 cut(s) | 1629, 1793, 1844, 2279, 2364, 2493, 2688, 2696, 3002 |
| TscAI | CASTG | 9 cut(s) | 637, 989, 1786, 2215, 2313, 2419, 2578, 2644, 2661 |
| TseFI | GTSAC | 3 cut(s) | 632, 730, 1925 |
| TseI | GCWGC | 8 cut(s) | 806, 1063, 2169, 2421, 2760, 2776, 2952, 3314 |
| Tsp45I | GTSAC | 3 cut(s) | 632, 730, 1925 |
| TspGWI | ACGGA | 5 cut(s) | 190, 451, 749, 887, 1160 |
| TspRI | CASTG | 9 cut(s) | 637, 989, 1786, 2215, 2313, 2419, 2578, 2644, 2661 |
| VpaK11BI | GGWCC | 3 cut(s) | 455, 1934, 2546 |
| XapI | RAATTY | 4 cut(s) | 1321, 1332, 1367, 1753 |
| XbaI | TCTAGA | 1 cut(s) | 2804 |
| XceI | RCATGY | 3 cut(s) | 1360, 2064, 2219 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 544 |
| XmiI | GTMKAC | 3 cut(s) | 21, 1039, 1904 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1422, 2236 |
| XspI | CTAG | 5 cut(s) | 887, 2046, 2432, 2805, 2850 |
| ZraI | GACGTC | 1 cut(s) | 1401 |
| ZrmI | AGTACT | 1 cut(s) | 1972 |