methyl-CpG-binding domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g37120 FvH4_5g37120 FvH4_5g37120 FvH4_5g37120 FvH4_5g37120 FvH4_5g37120 FvH4_5g37120 FvH4_5g37120 FvH4_5g37120 |
| malus_domestica | MD00G1009700.v1.1 MD08G1184300.v1.1 MD15G1370800.v1.1 |
| prunus_persica | Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 Prupe.1G518500_v2.0.a1 |
| pyrus_communis | pycom08g15800 |
| rosa_chinensis | RchiOBHm_Chr7g0238671 RchiOBHm_Chr7g0243951 RchiOBHm_Chr7g0243961 |
| rosa_laevigata | RLG00000000820 |
| rosa_multiflora | Rmu_sc0006110.1_g000008 |
| rosa_roxburghii | Rroxscaffold_3G00221630 |
| rosa_rugosa | Rorug07G0322800 |
| rosa_samantha | Rh7AG477200 Rh7BG448500 Rh7CG495300 Rh7DG462200 |
| rosa_wichuraiana | Rw7G039830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 549 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1695 |
| AccBSI | CCGCTC | 1 cut(s) | 63 |
| AccI | GTMKAC | 1 cut(s) | 1914 |
| AciI | CCGC | 1 cut(s) | 61 |
| AclWI | GGATC | 3 cut(s) | 143, 156, 1742 |
| AcoI | YGGCCR | 1 cut(s) | 234 |
| AcsI | RAATTY | 5 cut(s) | 186, 322, 885, 1504, 1726 |
| AcuI | CTGAAG | 1 cut(s) | 615 |
| AdeI | CACNNNGTG | 1 cut(s) | 1695 |
| AfaI | GTAC | 2 cut(s) | 628, 895 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 926, 1295, 1695, 1800 |
| AflII | CTTAAG | 1 cut(s) | 1283 |
| AflIII | ACRYGT | 1 cut(s) | 728 |
| AjnI | CCWGG | 2 cut(s) | 1039, 1182 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 152, 184 |
| AluBI | AGCT | 9 cut(s) | 52, 93, 414, 479, 903, 1194, 1578, 1597, 1798 |
| AluI | AGCT | 9 cut(s) | 52, 93, 414, 479, 903, 1194, 1578, 1597, 1798 |
| Alw26I | GTCTC | 2 cut(s) | 593, 675 |
| AlwI | GGATC | 3 cut(s) | 143, 156, 1742 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 716 |
| AoxI | GGCC | 5 cut(s) | 234, 799, 1143, 1382, 1743 |
| ApeKI | GCWGC | 6 cut(s) | 710, 837, 1435, 1449, 1702, 1958 |
| ApoI | RAATTY | 5 cut(s) | 186, 322, 885, 1504, 1726 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 314, 346 |
| AseI | ATTAAT | 1 cut(s) | 945 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 904 |
| AspS9I | GGNCC | 3 cut(s) | 593, 1143, 1514 |
| AsuHPI | GGTGA | 1 cut(s) | 488 |
| AsuII | TTCGAA | 1 cut(s) | 889 |
| AvaII | GGWCC | 2 cut(s) | 593, 1514 |
| BaeGI | GKGCMC | 1 cut(s) | 429 |
| BalI | TGGCCA | 1 cut(s) | 236 |
| BamHI | GGATCC | 1 cut(s) | 148 |
| BanII | GRGCYC | 1 cut(s) | 783 |
| BbsI | GAAGAC | 1 cut(s) | 827 |
| BbvI | GCAGC | 5 cut(s) | 722, 849, 1422, 1461, 1714 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1224, 1258 |
| BciT130I | CCWGG | 2 cut(s) | 1041, 1184 |
| BcoDI | GTCTC | 2 cut(s) | 593, 675 |
| BfaI | CTAG | 1 cut(s) | 507 |
| BfmI | CTRYAG | 2 cut(s) | 513, 1158 |
| BfrI | CTTAAG | 1 cut(s) | 1283 |
| BfuAI | ACCTGC | 1 cut(s) | 549 |
| BglII | AGATCT | 1 cut(s) | 1415 |
| BisI | GCNGC | 7 cut(s) | 61, 711, 838, 1436, 1450, 1703, 1959 |
| BlsI | GCNGC | 7 cut(s) | 62, 712, 839, 1437, 1451, 1704, 1960 |
| BmcAI | AGTACT | 2 cut(s) | 628, 895 |
| Bme1390I | CCNGG | 2 cut(s) | 1041, 1184 |
| Bme18I | GGWCC | 2 cut(s) | 593, 1514 |
| BmgT120I | GGNCC | 3 cut(s) | 593, 1143, 1514 |
| BmiI | GGNNCC | 2 cut(s) | 150, 688 |
| BmrFI | CCNGG | 2 cut(s) | 1041, 1184 |
| BmrI | ACTGGG | 1 cut(s) | 954 |
| BmsI | GCATC | 2 cut(s) | 122, 1244 |
| BmuI | ACTGGG | 1 cut(s) | 954 |
| BpiI | GAAGAC | 1 cut(s) | 827 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1799 |
| Bpu14I | TTCGAA | 1 cut(s) | 889 |
| BpuEI | CTTGAG | 2 cut(s) | 1363, 1494 |
| BsaJI | CCNNGG | 3 cut(s) | 867, 1039, 1713 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1798, 1828 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 926, 1295, 1695, 1800 |
| Bse1I | ACTGG | 5 cut(s) | 197, 901, 960, 1153, 1561 |
| Bse3DI | GCAATG | 1 cut(s) | 957 |
| BseBI | CCWGG | 2 cut(s) | 1041, 1184 |
| BseDI | CCNNGG | 3 cut(s) | 867, 1039, 1713 |
| BseGI | GGATG | 4 cut(s) | 176, 931, 1373, 1936 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 926, 1295, 1695, 1800 |
| BseMI | GCAATG | 1 cut(s) | 957 |
| BseMII | CTCAG | 3 cut(s) | 429, 588, 1593 |
| BseNI | ACTGG | 5 cut(s) | 197, 901, 960, 1153, 1561 |
| BseRI | GAGGAG | 2 cut(s) | 353, 1418 |
| BseSI | GKGCMC | 1 cut(s) | 429 |
| BseXI | GCAGC | 5 cut(s) | 722, 849, 1422, 1461, 1714 |
| BsgI | GTGCAG | 2 cut(s) | 729, 1842 |
| BshFI | GGCC | 5 cut(s) | 236, 801, 1145, 1384, 1745 |
| BslFI | GGGAC | 2 cut(s) | 187, 1592 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 926, 1295, 1695, 1800 |
| BsmAI | GTCTC | 2 cut(s) | 593, 675 |
| BsmFI | GGGAC | 2 cut(s) | 187, 1592 |
| BsmI | GAATGC | 1 cut(s) | 1480 |
| BsnI | GGCC | 5 cut(s) | 236, 801, 1145, 1384, 1745 |
| Bsp119I | TTCGAA | 1 cut(s) | 889 |
| Bsp1286I | GDGCHC | 2 cut(s) | 429, 783 |
| Bsp143I | GATC | 5 cut(s) | 148, 873, 1415, 1734, 1894 |
| Bsp19I | CCATGG | 1 cut(s) | 867 |
| BspACI | CCGC | 1 cut(s) | 61 |
| BspANI | GGCC | 5 cut(s) | 236, 801, 1145, 1384, 1745 |
| BspCNI | CTCAG | 3 cut(s) | 428, 589, 1592 |
| BspHI | TCATGA | 2 cut(s) | 46, 676 |
| BspLI | GGNNCC | 2 cut(s) | 150, 688 |
| BspMAI | CTGCAG | 1 cut(s) | 1162 |
| BspMI | ACCTGC | 1 cut(s) | 549 |
| BspPI | GGATC | 3 cut(s) | 143, 156, 1742 |
| BspT104I | TTCGAA | 1 cut(s) | 889 |
| BspTI | CTTAAG | 1 cut(s) | 1283 |
| BsrBI | CCGCTC | 1 cut(s) | 63 |
| BsrDI | GCAATG | 1 cut(s) | 957 |
| BsrI | ACTGG | 5 cut(s) | 197, 901, 960, 1153, 1561 |
| BssECI | CCNNGG | 3 cut(s) | 867, 1039, 1713 |
| BssMI | GATC | 5 cut(s) | 148, 873, 1415, 1734, 1894 |
| BssNAI | GTATAC | 1 cut(s) | 1915 |
| BssT1I | CCWWGG | 1 cut(s) | 867 |
| Bst1107I | GTATAC | 1 cut(s) | 1915 |
| Bst2UI | CCWGG | 2 cut(s) | 1041, 1184 |
| Bst4CI | ACNGT | 5 cut(s) | 446, 514, 695, 970, 1492 |
| Bst6I | CTCTTC | 1 cut(s) | 678 |
| BstAFI | CTTAAG | 1 cut(s) | 1283 |
| BstBI | TTCGAA | 1 cut(s) | 889 |
| BstC8I | GCNNGC | 7 cut(s) | 345, 640, 644, 1003, 1095, 1233, 1627 |
| BstDEI | CTNAG | 5 cut(s) | 415, 597, 1579, 1621, 1799 |
| BstDSI | CCRYGG | 1 cut(s) | 867 |
| BstF5I | GGATG | 4 cut(s) | 176, 931, 1373, 1936 |
| BstKTI | GATC | 5 cut(s) | 151, 876, 1418, 1737, 1897 |
| BstMAI | GTCTC | 2 cut(s) | 593, 675 |
| BstMBI | GATC | 5 cut(s) | 148, 873, 1415, 1734, 1894 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 353, 1200, 1220, 1455 |
| BstNI | CCWGG | 2 cut(s) | 1041, 1184 |
| BstNSI | RCATGY | 4 cut(s) | 732, 1097, 1235, 1965 |
| BstSCI | CCNGG | 2 cut(s) | 1039, 1182 |
| BstSFI | CTRYAG | 2 cut(s) | 513, 1158 |
| BstSLI | GKGCMC | 1 cut(s) | 429 |
| BstV1I | GCAGC | 5 cut(s) | 722, 849, 1422, 1461, 1714 |
| BstV2I | GAAGAC | 1 cut(s) | 827 |
| BstX2I | RGATCY | 2 cut(s) | 148, 1415 |
| BstYI | RGATCY | 2 cut(s) | 148, 1415 |
| BstZ17I | GTATAC | 1 cut(s) | 1915 |
| BsuRI | GGCC | 5 cut(s) | 236, 801, 1145, 1384, 1745 |
| BtgI | CCRYGG | 1 cut(s) | 867 |
| BtgZI | GCGATG | 1 cut(s) | 362 |
| BtsCI | GGATG | 4 cut(s) | 176, 931, 1373, 1936 |
| BtsI | GCAGTG | 2 cut(s) | 1465, 1776 |
| BveI | ACCTGC | 1 cut(s) | 549 |
| Cac8I | GCNNGC | 7 cut(s) | 345, 640, 644, 1003, 1095, 1233, 1627 |
| CaiI | CAGNNNCTG | 1 cut(s) | 716 |
| CciI | TCATGA | 2 cut(s) | 46, 676 |
| Cfr13I | GGNCC | 3 cut(s) | 593, 1143, 1514 |
| Csp6I | GTAC | 2 cut(s) | 627, 894 |
| CviQI | GTAC | 2 cut(s) | 627, 894 |
| DdeI | CTNAG | 5 cut(s) | 415, 597, 1579, 1621, 1799 |
| DpnI | GATC | 5 cut(s) | 150, 875, 1417, 1736, 1896 |
| DpnII | GATC | 5 cut(s) | 148, 873, 1415, 1734, 1894 |
| DraI | TTTAAA | 1 cut(s) | 1761 |
| DraIII | CACNNNGTG | 1 cut(s) | 1695 |
| EaeI | YGGCCR | 1 cut(s) | 234 |
| Eam1104I | CTCTTC | 1 cut(s) | 678 |
| EarI | CTCTTC | 1 cut(s) | 678 |
| Eco130I | CCWWGG | 1 cut(s) | 867 |
| Eco24I | GRGCYC | 1 cut(s) | 783 |
| Eco32I | GATATC | 1 cut(s) | 283 |
| Eco47I | GGWCC | 2 cut(s) | 593, 1514 |
| Eco57I | CTGAAG | 1 cut(s) | 615 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1514 |
| EcoRI | GAATTC | 2 cut(s) | 322, 885 |
| EcoRII | CCWGG | 2 cut(s) | 1039, 1182 |
| EcoRV | GATATC | 1 cut(s) | 283 |
| EcoT14I | CCWWGG | 1 cut(s) | 867 |
| EcoT22I | ATGCAT | 1 cut(s) | 1237 |
| EcoT38I | GRGCYC | 1 cut(s) | 783 |
| ErhI | CCWWGG | 1 cut(s) | 867 |
| FaqI | GGGAC | 2 cut(s) | 187, 1592 |
| FauNDI | CATATG | 1 cut(s) | 1219 |
| FblI | GTMKAC | 1 cut(s) | 1914 |
| Fnu4HI | GCNGC | 7 cut(s) | 61, 711, 838, 1436, 1450, 1703, 1959 |
| FokI | GGATG | 4 cut(s) | 163, 938, 1360, 1923 |
| FriOI | GRGCYC | 1 cut(s) | 783 |
| Fsp4HI | GCNGC | 7 cut(s) | 61, 711, 838, 1436, 1450, 1703, 1959 |
| FspBI | CTAG | 1 cut(s) | 507 |
| GluI | GCNGC | 7 cut(s) | 61, 711, 838, 1436, 1450, 1703, 1959 |
| HaeIII | GGCC | 5 cut(s) | 236, 801, 1145, 1384, 1745 |
| HincII | GTYRAC | 1 cut(s) | 616 |
| HindII | GTYRAC | 1 cut(s) | 616 |
| HinfI | GANTC | 9 cut(s) | 317, 583, 668, 758, 863, 955, 1605, 1766, 1784 |
| HphI | GGTGA | 1 cut(s) | 488 |
| Hpy166II | GTNNAC | 3 cut(s) | 616, 1463, 1915 |
| Hpy188III | TCNNGA | 6 cut(s) | 47, 100, 117, 191, 677, 923 |
| Hpy8I | GTNNAC | 3 cut(s) | 616, 1463, 1915 |
| HpyAV | CCTTC | 3 cut(s) | 663, 1070, 1527 |
| HpyCH4III | ACNGT | 5 cut(s) | 446, 514, 695, 970, 1492 |
| HpyCH4IV | ACGT | 1 cut(s) | 1824 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 353, 1200, 1220, 1455 |
| HpyF3I | CTNAG | 5 cut(s) | 415, 597, 1579, 1621, 1799 |
| HpySE526I | ACGT | 1 cut(s) | 1824 |
| Kzo9I | GATC | 5 cut(s) | 148, 873, 1415, 1734, 1894 |
| LmnI | GCTCC | 4 cut(s) | 68, 340, 476, 1699 |
| Lsp1109I | GCAGC | 5 cut(s) | 722, 849, 1422, 1461, 1714 |
| LweI | GCATC | 2 cut(s) | 122, 1244 |
| MaeI | CTAG | 1 cut(s) | 507 |
| MaeII | ACGT | 1 cut(s) | 1824 |
| MaeIII | GTNAC | 2 cut(s) | 584, 1492 |
| MalI | GATC | 5 cut(s) | 150, 875, 1417, 1736, 1896 |
| MbiI | CCGCTC | 1 cut(s) | 63 |
| MboI | GATC | 5 cut(s) | 148, 873, 1415, 1734, 1894 |
| MboII | GAAGA | 6 cut(s) | 47, 665, 832, 986, 1289, 1845 |
| MfeI | CAATTG | 2 cut(s) | 657, 1386 |
| MflI | RGATCY | 2 cut(s) | 148, 1415 |
| MhlI | GDGCHC | 2 cut(s) | 429, 783 |
| MlsI | TGGCCA | 1 cut(s) | 236 |
| MluNI | TGGCCA | 1 cut(s) | 236 |
| MlyI | GAGTC | 3 cut(s) | 592, 677, 1614 |
| MmeI | TCCRAC | 1 cut(s) | 714 |
| Mox20I | TGGCCA | 1 cut(s) | 236 |
| Mph1103I | ATGCAT | 1 cut(s) | 1237 |
| MroXI | GAANNNNTTC | 1 cut(s) | 904 |
| MscI | TGGCCA | 1 cut(s) | 236 |
| Msp20I | TGGCCA | 1 cut(s) | 236 |
| MspCI | CTTAAG | 1 cut(s) | 1283 |
| MspR9I | CCNGG | 2 cut(s) | 1041, 1184 |
| MunI | CAATTG | 2 cut(s) | 657, 1386 |
| Mva1269I | GAATGC | 1 cut(s) | 1480 |
| MvaI | CCWGG | 2 cut(s) | 1041, 1184 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 353, 1200, 1220, 1455 |
| NcoI | CCATGG | 1 cut(s) | 867 |
| NdeI | CATATG | 1 cut(s) | 1219 |
| NdeII | GATC | 5 cut(s) | 148, 873, 1415, 1734, 1894 |
| NlaIV | GGNNCC | 2 cut(s) | 150, 688 |
| NmuCI | GTSAC | 2 cut(s) | 584, 1492 |
| NsiI | ATGCAT | 1 cut(s) | 1237 |
| NspI | RCATGY | 4 cut(s) | 732, 1097, 1235, 1965 |
| NspV | TTCGAA | 1 cut(s) | 889 |
| PaeI | GCATGC | 2 cut(s) | 1097, 1235 |
| PagI | TCATGA | 2 cut(s) | 46, 676 |
| PciI | ACATGT | 1 cut(s) | 728 |
| PctI | GAATGC | 1 cut(s) | 1480 |
| PdmI | GAANNNNTTC | 1 cut(s) | 904 |
| PfeI | GAWTC | 6 cut(s) | 317, 758, 863, 955, 1766, 1784 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1695 |
| PkrI | GCNGC | 7 cut(s) | 62, 712, 839, 1437, 1451, 1704, 1960 |
| PleI | GAGTC | 3 cut(s) | 591, 676, 1613 |
| PpsI | GAGTC | 3 cut(s) | 591, 676, 1613 |
| PpuMI | RGGWCCY | 1 cut(s) | 1514 |
| PscI | ACATGT | 1 cut(s) | 728 |
| PshBI | ATTAAT | 1 cut(s) | 945 |
| Psp5II | RGGWCCY | 1 cut(s) | 1514 |
| Psp6I | CCWGG | 2 cut(s) | 1039, 1182 |
| PspGI | CCWGG | 2 cut(s) | 1039, 1182 |
| PspN4I | GGNNCC | 2 cut(s) | 150, 688 |
| PspPI | GGNCC | 3 cut(s) | 593, 1143, 1514 |
| PspPPI | RGGWCCY | 1 cut(s) | 1514 |
| PstI | CTGCAG | 1 cut(s) | 1162 |
| PstNI | CAGNNNCTG | 1 cut(s) | 716 |
| PsuI | RGATCY | 2 cut(s) | 148, 1415 |
| RsaI | GTAC | 2 cut(s) | 628, 895 |
| RsaNI | GTAC | 2 cut(s) | 627, 894 |
| SatI | GCNGC | 7 cut(s) | 61, 711, 838, 1436, 1450, 1703, 1959 |
| Sau3AI | GATC | 5 cut(s) | 148, 873, 1415, 1734, 1894 |
| Sau96I | GGNCC | 3 cut(s) | 593, 1143, 1514 |
| ScaI | AGTACT | 2 cut(s) | 628, 895 |
| SchI | GAGTC | 3 cut(s) | 592, 677, 1614 |
| ScrFI | CCNGG | 2 cut(s) | 1041, 1184 |
| SduI | GDGCHC | 2 cut(s) | 429, 783 |
| SfaNI | GCATC | 2 cut(s) | 122, 1244 |
| SfcI | CTRYAG | 2 cut(s) | 513, 1158 |
| SfuI | TTCGAA | 1 cut(s) | 889 |
| SinI | GGWCC | 2 cut(s) | 593, 1514 |
| SmlI | CTYRAG | 3 cut(s) | 1283, 1378, 1509 |
| SmoI | CTYRAG | 3 cut(s) | 1283, 1378, 1509 |
| SphI | GCATGC | 2 cut(s) | 1097, 1235 |
| SsiI | CCGC | 1 cut(s) | 61 |
| SspI | AATATT | 2 cut(s) | 296, 487 |
| SspMI | CTAG | 1 cut(s) | 507 |
| StyD4I | CCNGG | 2 cut(s) | 1039, 1182 |
| StyI | CCWWGG | 1 cut(s) | 867 |
| TaaI | ACNGT | 5 cut(s) | 446, 514, 695, 970, 1492 |
| TaiI | ACGT | 1 cut(s) | 1827 |
| TaqI | TCGA | 3 cut(s) | 320, 889, 1954 |
| TatI | WGTACW | 2 cut(s) | 626, 893 |
| TauI | GCSGC | 1 cut(s) | 63 |
| TfiI | GAWTC | 6 cut(s) | 317, 758, 863, 955, 1766, 1784 |
| TseFI | GTSAC | 2 cut(s) | 584, 1492 |
| TseI | GCWGC | 6 cut(s) | 710, 837, 1435, 1449, 1702, 1958 |
| Tsp45I | GTSAC | 2 cut(s) | 584, 1492 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1695 |
| Vha464I | CTTAAG | 1 cut(s) | 1283 |
| VpaK11BI | GGWCC | 2 cut(s) | 593, 1514 |
| VspI | ATTAAT | 1 cut(s) | 945 |
| XapI | RAATTY | 5 cut(s) | 186, 322, 885, 1504, 1726 |
| XceI | RCATGY | 4 cut(s) | 732, 1097, 1235, 1965 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 967 |
| XmiI | GTMKAC | 1 cut(s) | 1914 |
| XmnI | GAANNNNTTC | 1 cut(s) | 904 |
| XspI | CTAG | 1 cut(s) | 507 |
| ZrmI | AGTACT | 2 cut(s) | 628, 895 |
| Zsp2I | ATGCAT | 1 cut(s) | 1237 |