Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0006222

Physical Location & Seq

Genomic Coordinates Reverse (-)

1843288 .. 1851405

Gene Structure 8118 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g03330.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2190 bp

ATGTGGCTTAATTCTGTATCGTCGTGCTTCCCGAATCTAAAACCCTACAACTGCTACTGCTCTGCAACTCCTCCACCACCACCGACCGCCGTGAAAGCTCTGACGGCGATGACAACGCAGGAATCCGAAGTCGGAATATTCTGCTACATCTCTCCTCTCCCCGGTTTTCGCGGCATTCTTAAGCAAAGGTATTCTGATTTTATGGTGAATGAAGTCGATATGGAAGGAAATGTGGTTCATTTGACCAATTTGGAAGCTCCGCCGGAGGTAGTGAAGGAAAACGGAGCGAAGACGGAGGATGCTGCGAGTAAAGATTATAGTGCTGAAATCGAGAAGTTTAGGTGTCTTGCTAGTGGTGAAGATGTTGAACGGTTGGAAGCTTTCATCAGGGAGGTTAATTCGGGGAGTGAAGATGGTGTTATGCCTATTGTGCTCTCACCAGACTATGATAAAGTTCATAGGACGGCGGTGCATAACTTTTTTAAGGAGAACTTAAAGTTCCTTGTGACCGACGCAGTGGATGGACCAGATGCTTCATCAAAGTGCATCCGTGTGAGACTAAATTCGGGAGGGCAGAATGGCAGAGGCAGAAATTCGAAAAAGCGAAAAGAAAGGGGTGATAAACCTTTTGATAGCAGAGGTGTTGATGACTGGTCAGAGCATGTTGGCAAGTTCCTAAGGTTTCATCTTTTCAAGGAGAACAAGGATACACAAGAAGCTTTAGGAGTTATAGGAAAGATGCTTGGTATACAGCCAAGGGCATTTGGGTTCGCGGGTACAAAGGATAAGCGTGCTGTTACTTGTCAAAGGGTAACCGTCTTTAAACAGTTTGCAAGTAGATTGGCTGCTTTGAATGATAGGTTGATCGGTATCAAAGTAGGCGACTTTTGCTATGTGAAAGAAGGACTTTCTCTTGGCCAACTCCTGGGAAATCGCTTTACAATTACATTGAGAGGAGTTGTTGCAGATTCTGAAGATATCATCCAGGCCTCTGCAAATGCCTTAGGAAAACAGGGATTTGTTAACTACTTTGGTTTACAAAGATTTGGAAGTGGTTCAATTCCAACACATCTTATTGGAGCTTCACTACTGAGAGGAGAGTGGAAATCTACTGTAAGCATGATGCTTGAACCAAGGGAAGGAGAAAGAGATGTGATTACCGAGGCACGGAAATACTATAAGGAAAGTAATGATATTGACGGGACCTTAAGGAAATTACCTCGATATCTTGTTGCTGAAAGAGCTGTTCTGCAGTGTCTGAAGAAATGTCCTGGAAACTACTCTCAGGCTTTGAAAGCTGTTCCCAGAACTTTGAGGATGATGTATGTGCATAGTTACCAGAGCTATTTGTGGAACCATGCAGCAAGTATGAGAGTGCAAAAATATGGAACTGACCGAGTTGTGGTGGGAGACTTGGTATATTGTAAAGGACATGAAACTGAGAAGGTGACTGGAATTGTTAGTTCTGAGTGTGTGGATGAAAATGTTAACGATGAAAACTGTGATGATACATTTGATCCTAATCATTTGGATGATATATCAGAAACAAATGTTCCTGAGGCGAGGGTTAGTCTTGTAAAGGCTGTAACTGCAGAAGATATCAACAACGGGACTTACACAATTGATGATATTGTCCTTCCTCTGCCAGGATCAAGGGTCATCTTTCCAGAAAATGATATTGCTGCTGTTTTTCATGATCTTGCAAAGAAGGATGGAATTAGCTTGACAGAGAGCGTACATAATGTCAAGGAGTTCTCAATAACGAATGTGACCGGAAGTTATAGGCGGGTGTTCCAAAAACCAGTGGACTTTGAATGGGATATACTAAAGTATATTGATGGCAATATACCATTGGTGGAGACGGATTTTGAAAAAATTGCAAAAACCAAGCCTGTGAATGTAAACAAAGAGTACCCAACAGGTGTCAGTGGAGATGGAAGTTTACATGATCGCATCAAACAGTCAGAGTGCTCTGTCAATGATGTACAACTGCCGAAAAAAGATAATGAGGTGGAAAGCGAGGGAGAAAAGTTGCCACATGTTGAATCTCTTGGTGGCCCTATTCCTCAGGGAACTCAGATTGCTCTCAAGTTGAGCTTTACTCTCCCAGCATCTTGTTATGCAACAATGGCCATCAGAGAGCTACTGAAGACTTCGACATCTGTTGCTTTCCACAAAACATTGAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0000455 GO:0001522 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005732 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006399 GO:0006400 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009451 GO:0009982 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016072 GO:0016073 GO:0016556 GO:0016853 GO:0016866 GO:0022613 GO:0031118 GO:0031119 GO:0031120 GO:0031429 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0040031 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0072588 GO:0090304 GO:1901360 GO:1902494 GO:1990481 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TruD

Protein Analysis

730

Amino Acids

80.97

Weight (kDa)

6.17

Isoelectric Point (pI)

28.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TruD	PF01142	220 - 441	1.1e-55	tRNA pseudouridine synthase D (TruD)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006222)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04820
fragaria_vesca	FvH4_6g03330 FvH4_6g03330 FvH4_6g03330 FvH4_6g03330 FvH4_6g03330 FvH4_6g03330 FvH4_6g03330
malus_domestica	MD04G1221700.v1.1 MD12G1237800.v1.1
prunus_persica	Prupe.6G340900_v2.0.a1
pyrus_communis	pycom04g19610 pycom04g19630 pycom12g21860 pycom12g21870
rosa_chinensis	RchiOBHm_Chr3g0451831
rosa_laevigata	RLG00000025646
rosa_multiflora	Rmu_sc0006510.1_g000014
rosa_roxburghii	Rroxscaffold_164G00436290 Rroxscaffold_6G00429000
rosa_rugosa	Rorug02G0636600 Rorug02G0636600
rosa_samantha	Rh3AG038100 Rh3BG039300 Rh3CG037800 Rh3DG038600
rosa_wichuraiana	Rw3G002840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	925
AccI	GTMKAC	1 cut(s)	748
AccII	CGCG	2 cut(s)	171, 773
AciI	CCGC	6 cut(s)	87, 171, 260, 467, 773, 1786
AclWI	GGATC	2 cut(s)	1511, 1657
AcoI	YGGCCR	2 cut(s)	916, 2130
AcsI	RAATTY	2 cut(s)	562, 592
AcuI	CTGAAG	3 cut(s)	993, 1280, 2168
AfaI	GTAC	4 cut(s)	778, 1737, 1913, 1986
AfiI	CCNNNNNNNGG	6 cut(s)	161, 925, 1139, 1167, 1402, 1646
AflII	CTTAAG	2 cut(s)	179, 1207
AflIII	ACRYGT	1 cut(s)	2038
AjnI	CCWGG	4 cut(s)	924, 984, 1270, 1645
AloI	GAACNNNNNNTCC	2 cut(s)	219, 251
Alw21I	GWGCWC	2 cut(s)	435, 1973
Alw26I	GTCTC	3 cut(s)	550, 1404, 1853
AlwI	GGATC	2 cut(s)	1511, 1657
AlwNI	CAGNNNCTG	2 cut(s)	971, 1258
AoxI	GGCC	4 cut(s)	916, 987, 2056, 2130
ApeKI	GCWGC	4 cut(s)	302, 845, 1361, 1682
ApoI	RAATTY	2 cut(s)	562, 592
Asp700I	GAANNNNTTC	1 cut(s)	1054
AspS9I	GGNCC	3 cut(s)	524, 1203, 2057
AsuC2I	CCSGG	1 cut(s)	162
AsuHPI	GGTGA	5 cut(s)	217, 368, 429, 629, 1459
AsuII	TTCGAA	1 cut(s)	596
AvaII	GGWCC	2 cut(s)	524, 1203
AxyI	CCTNAGG	4 cut(s)	677, 1003, 1557, 2067
BalI	TGGCCA	2 cut(s)	918, 2132
BbsI	GAAGAC	2 cut(s)	296, 2156
Bbv12I	GWGCWC	2 cut(s)	435, 1973
BbvI	GCAGC	4 cut(s)	289, 832, 1373, 1669
BccI	CCATC	6 cut(s)	407, 515, 1706, 1832, 1928, 2141
BceAI	ACGGC	3 cut(s)	74, 120, 480
BciT130I	CCWGG	4 cut(s)	926, 986, 1272, 1647
BciVI	GTATCC	1 cut(s)	700
BcnI	CCSGG	1 cut(s)	162
BcoDI	GTCTC	3 cut(s)	550, 1404, 1853
BfaI	CTAG	2 cut(s)	351, 2188
BfmI	CTRYAG	2 cut(s)	1250, 1590
BfrI	CTTAAG	2 cut(s)	179, 1207
BfuI	GTATCC	1 cut(s)	700
BisI	GCNGC	5 cut(s)	172, 303, 846, 1362, 1683
BlsI	GCNGC	5 cut(s)	173, 304, 847, 1363, 1684
Bme1390I	CCNGG	5 cut(s)	162, 926, 986, 1272, 1647
Bme18I	GGWCC	2 cut(s)	524, 1203
BmgT120I	GGNCC	3 cut(s)	524, 1203, 2057
BmiI	GGNNCC	2 cut(s)	1204, 1355
BmrFI	CCNGG	5 cut(s)	162, 926, 986, 1272, 1647
BmsI	GCATC	7 cut(s)	289, 520, 555, 729, 1113, 1962, 2120
BpiI	GAAGAC	2 cut(s)	296, 2156
BplI	GAGNNNNNCTC	2 cut(s)	2086, 2118
Bpu14I	TTCGAA	1 cut(s)	596
BpuEI	CTTGAG	1 cut(s)	2072
BpuMI	CCSGG	1 cut(s)	162
BsaBI	GATNNNNATC	2 cut(s)	869, 1521
BsaJI	CCNNGG	5 cut(s)	160, 755, 925, 1133, 1161
BsaWI	WCCGGW	1 cut(s)	1772
BsaXI	ACNNNNNCTCC	2 cut(s)	1401, 1431
Bsc4I	CCNNNNNNNGG	6 cut(s)	161, 925, 1139, 1167, 1402, 1646
Bse1I	ACTGG	3 cut(s)	656, 1456, 1802
Bse21I	CCTNAGG	4 cut(s)	677, 1003, 1557, 2067
Bse8I	GATNNNNATC	2 cut(s)	869, 1521
BseBI	CCWGG	4 cut(s)	926, 986, 1272, 1647
BseDI	CCNNGG	5 cut(s)	160, 755, 925, 1133, 1161
BseGI	GGATG	8 cut(s)	304, 526, 546, 981, 1323, 1483, 1537, 1717
BseJI	GATNNNNATC	2 cut(s)	869, 1521
BseLI	CCNNNNNNNGG	6 cut(s)	161, 925, 1139, 1167, 1402, 1646
BseMII	CTCAG	7 cut(s)	1082, 1298, 1431, 1458, 1548, 2081, 2090
BseNI	ACTGG	3 cut(s)	656, 1456, 1802
BseRI	GAGGAG	4 cut(s)	60, 144, 969, 1110
BseXI	GCAGC	4 cut(s)	289, 832, 1373, 1669
BseYI	CCCAGC	1 cut(s)	2107
Bsh1236I	CGCG	2 cut(s)	171, 773
Bsh1285I	CGRYCG	1 cut(s)	87
BshFI	GGCC	4 cut(s)	918, 989, 2058, 2132
BsiEI	CGRYCG	1 cut(s)	87
BsiHKAI	GWGCWC	2 cut(s)	435, 1973
BsiSI	CCGG	3 cut(s)	162, 263, 1773
BslFI	GGGAC	2 cut(s)	1216, 1624
BslI	CCNNNNNNNGG	6 cut(s)	161, 925, 1139, 1167, 1402, 1646
BsmAI	GTCTC	3 cut(s)	550, 1404, 1853
BsmBI	CGTCTC	1 cut(s)	1853
BsmFI	GGGAC	2 cut(s)	1216, 1624
BsmI	GAATGC	1 cut(s)	174
BsnI	GGCC	4 cut(s)	918, 989, 2058, 2132
Bsp119I	TTCGAA	1 cut(s)	596
Bsp1286I	GDGCHC	2 cut(s)	435, 1973
Bsp1407I	TGTACA	1 cut(s)	1984
Bsp143I	GATC	5 cut(s)	864, 1516, 1649, 1696, 1948
BspACI	CCGC	6 cut(s)	87, 171, 260, 467, 773, 1786
BspANI	GGCC	4 cut(s)	918, 989, 2058, 2132
BspCNI	CTCAG	7 cut(s)	1083, 1297, 1432, 1459, 1549, 2080, 2089
BspFNI	CGCG	2 cut(s)	171, 773
BspHI	TCATGA	1 cut(s)	1693
BspLI	GGNNCC	2 cut(s)	1204, 1355
BspMAI	CTGCAG	2 cut(s)	1254, 1594
BspPI	GGATC	2 cut(s)	1511, 1657
BspT104I	TTCGAA	1 cut(s)	596
BspTI	CTTAAG	2 cut(s)	179, 1207
BsrGI	TGTACA	1 cut(s)	1984
BsrI	ACTGG	3 cut(s)	656, 1456, 1802
BssECI	CCNNGG	5 cut(s)	160, 755, 925, 1133, 1161
BssMI	GATC	5 cut(s)	864, 1516, 1649, 1696, 1948
BssNAI	GTATAC	1 cut(s)	749
BssT1I	CCWWGG	2 cut(s)	755, 1133
Bst1107I	GTATAC	1 cut(s)	749
Bst2UI	CCWGG	4 cut(s)	926, 986, 1272, 1647
Bst4CI	ACNGT	6 cut(s)	372, 817, 828, 1114, 1502, 1962
BstAFI	CTTAAG	2 cut(s)	179, 1207
BstAUI	TGTACA	1 cut(s)	1984
BstBI	TTCGAA	1 cut(s)	596
BstC8I	GCNNGC	1 cut(s)	792
BstDEI	CTNAG	9 cut(s)	677, 1003, 1091, 1284, 1440, 1467, 1557, 2067, 2076
BstEII	GGTNACC	1 cut(s)	811
BstENI	CCTNNNNNAGG	1 cut(s)	1644
BstF5I	GGATG	8 cut(s)	304, 526, 546, 981, 1323, 1483, 1537, 1717
BstFNI	CGCG	2 cut(s)	171, 773
BstKTI	GATC	5 cut(s)	867, 1519, 1652, 1699, 1951
BstMAI	GTCTC	3 cut(s)	550, 1404, 1853
BstMBI	GATC	5 cut(s)	864, 1516, 1649, 1696, 1948
BstMCI	CGRYCG	1 cut(s)	87
BstMWI	GCNNNNNNNGC	8 cut(s)	95, 104, 430, 888, 1241, 1295, 1589, 2129
BstNI	CCWGG	4 cut(s)	926, 986, 1272, 1647
BstNSI	RCATGY	2 cut(s)	665, 2042
BstPI	GGTNACC	1 cut(s)	811
BstSCI	CCNGG	5 cut(s)	160, 924, 984, 1270, 1645
BstSFI	CTRYAG	2 cut(s)	1250, 1590
BstUI	CGCG	2 cut(s)	171, 773
BstV1I	GCAGC	4 cut(s)	289, 832, 1373, 1669
BstV2I	GAAGAC	2 cut(s)	296, 2156
BstZ17I	GTATAC	1 cut(s)	749
Bsu36I	CCTNAGG	4 cut(s)	677, 1003, 1557, 2067
BsuI	GTATCC	1 cut(s)	700
BsuRI	GGCC	4 cut(s)	918, 989, 2058, 2132
BtgZI	GCGATG	1 cut(s)	122
BtsCI	GGATG	8 cut(s)	304, 526, 546, 981, 1323, 1483, 1537, 1717
BtsI	GCAGTG	2 cut(s)	522, 1259
BtsIMutI	CAGTG	4 cut(s)	522, 1259, 1809, 1933
Cac8I	GCNNGC	1 cut(s)	792
CaiI	CAGNNNCTG	2 cut(s)	971, 1258
CciI	TCATGA	1 cut(s)	1693
Cfr13I	GGNCC	3 cut(s)	524, 1203, 2057
CseI	GACGC	1 cut(s)	521
Csp6I	GTAC	4 cut(s)	777, 1736, 1912, 1985
CviAII	CATG	7 cut(s)	662, 1120, 1358, 1433, 1694, 1946, 2039
CviQI	GTAC	4 cut(s)	777, 1736, 1912, 1985
DdeI	CTNAG	9 cut(s)	677, 1003, 1091, 1284, 1440, 1467, 1557, 2067, 2076
DpnI	GATC	5 cut(s)	866, 1518, 1651, 1698, 1950
DpnII	GATC	5 cut(s)	864, 1516, 1649, 1696, 1948
DraI	TTTAAA	1 cut(s)	823
EaeI	YGGCCR	2 cut(s)	916, 2130
EciI	GGCGGA	1 cut(s)	249
Eco130I	CCWWGG	2 cut(s)	755, 1133
Eco147I	AGGCCT	1 cut(s)	989
Eco32I	GATATC	3 cut(s)	979, 1226, 1600
Eco47I	GGWCC	2 cut(s)	524, 1203
Eco57I	CTGAAG	3 cut(s)	993, 1280, 2168
Eco81I	CCTNAGG	4 cut(s)	677, 1003, 1557, 2067
Eco91I	GGTNACC	1 cut(s)	811
EcoNI	CCTNNNNNAGG	1 cut(s)	1644
EcoO109I	RGGNCCY	1 cut(s)	1203
EcoO65I	GGTNACC	1 cut(s)	811
EcoRII	CCWGG	4 cut(s)	924, 984, 1270, 1645
EcoRV	GATATC	3 cut(s)	979, 1226, 1600
EcoT14I	CCWWGG	2 cut(s)	755, 1133
ErhI	CCWWGG	2 cut(s)	755, 1133
Esp3I	CGTCTC	1 cut(s)	1853
FaeI	CATG	7 cut(s)	665, 1123, 1361, 1436, 1697, 1949, 2042
FalI	AAGNNNNNCTT	6 cut(s)	476, 508, 891, 923, 2081, 2113
FaqI	GGGAC	2 cut(s)	1216, 1624
FatI	CATG	7 cut(s)	661, 1119, 1357, 1432, 1693, 1945, 2038
FauI	CCCGC	2 cut(s)	766, 1779
FblI	GTMKAC	1 cut(s)	748
Fnu4HI	GCNGC	5 cut(s)	172, 303, 846, 1362, 1683
FokI	GGATG	8 cut(s)	311, 533, 533, 968, 1330, 1490, 1544, 1724
Fsp4HI	GCNGC	5 cut(s)	172, 303, 846, 1362, 1683
FspBI	CTAG	2 cut(s)	351, 2188
GluI	GCNGC	5 cut(s)	172, 303, 846, 1362, 1683
GsaI	CCCAGC	1 cut(s)	2111
HaeIII	GGCC	4 cut(s)	918, 989, 2058, 2132
HapII	CCGG	3 cut(s)	162, 263, 1773
HgaI	GACGC	1 cut(s)	521
Hin1II	CATG	7 cut(s)	665, 1123, 1361, 1436, 1697, 1949, 2042
HincII	GTYRAC	2 cut(s)	1024, 1489
HindII	GTYRAC	2 cut(s)	1024, 1489
HindIII	AAGCTT	2 cut(s)	378, 717
HinfI	GANTC	4 cut(s)	34, 122, 968, 2045
HpaI	GTTAAC	2 cut(s)	1024, 1489
HpaII	CCGG	3 cut(s)	162, 263, 1773
HphI	GGTGA	5 cut(s)	217, 368, 429, 629, 1459
Hpy166II	GTNNAC	7 cut(s)	749, 1024, 1037, 1489, 1807, 1903, 1943
Hpy188III	TCNNGA	6 cut(s)	31, 331, 567, 1556, 1667, 1694
Hpy8I	GTNNAC	7 cut(s)	749, 1024, 1037, 1489, 1807, 1903, 1943
Hpy99I	CGWCG	2 cut(s)	25, 515
HpyAV	CCTTC	7 cut(s)	218, 268, 896, 1133, 1438, 1646, 1702
HpyCH4III	ACNGT	6 cut(s)	372, 817, 828, 1114, 1502, 1962
HpyF10VI	GCNNNNNNNGC	8 cut(s)	95, 104, 430, 888, 1241, 1295, 1589, 2129
HpyF3I	CTNAG	9 cut(s)	677, 1003, 1091, 1284, 1440, 1467, 1557, 2067, 2076
Hsp92II	CATG	7 cut(s)	665, 1123, 1361, 1436, 1697, 1949, 2042
KspAI	GTTAAC	2 cut(s)	1024, 1489
Kzo9I	GATC	5 cut(s)	864, 1516, 1649, 1696, 1948
LmnI	GCTCC	3 cut(s)	262, 284, 1079
Lsp1109I	GCAGC	4 cut(s)	289, 832, 1373, 1669
LweI	GCATC	7 cut(s)	289, 520, 555, 729, 1113, 1962, 2120
MaeI	CTAG	2 cut(s)	351, 2188
MaeIII	GTNAC	7 cut(s)	505, 796, 811, 1334, 1447, 1585, 1768
MalI	GATC	5 cut(s)	866, 1518, 1651, 1698, 1950
MboI	GATC	5 cut(s)	864, 1516, 1649, 1696, 1948
MboII	GAAGA	7 cut(s)	301, 371, 422, 986, 1273, 1607, 2161
MfeI	CAATTG	1 cut(s)	1620
MhlI	GDGCHC	2 cut(s)	435, 1973
MlsI	TGGCCA	2 cut(s)	918, 2132
MluNI	TGGCCA	2 cut(s)	918, 2132
MmeI	TCCRAC	3 cut(s)	112, 354, 1088
Mox20I	TGGCCA	2 cut(s)	918, 2132
MroXI	GAANNNNTTC	1 cut(s)	1054
MscI	TGGCCA	2 cut(s)	918, 2132
MseI	TTAA	9 cut(s)	9, 180, 396, 483, 494, 822, 1023, 1208, 1488
MslI	CAYNNNNRTG	3 cut(s)	541, 551, 1530
Msp20I	TGGCCA	2 cut(s)	918, 2132
MspCI	CTTAAG	2 cut(s)	179, 1207
MspI	CCGG	3 cut(s)	162, 263, 1773
MspR9I	CCNGG	5 cut(s)	162, 926, 986, 1272, 1647
MunI	CAATTG	1 cut(s)	1620
Mva1269I	GAATGC	1 cut(s)	174
MvaI	CCWGG	4 cut(s)	926, 986, 1272, 1647
MvnI	CGCG	2 cut(s)	171, 773
MwoI	GCNNNNNNNGC	8 cut(s)	95, 104, 430, 888, 1241, 1295, 1589, 2129
NciI	CCSGG	1 cut(s)	162
NdeII	GATC	5 cut(s)	864, 1516, 1649, 1696, 1948
NlaIII	CATG	7 cut(s)	665, 1123, 1361, 1436, 1697, 1949, 2042
NlaIV	GGNNCC	2 cut(s)	1204, 1355
NmuCI	GTSAC	3 cut(s)	505, 1447, 1768
NspI	RCATGY	2 cut(s)	665, 2042
NspV	TTCGAA	1 cut(s)	596
PagI	TCATGA	1 cut(s)	1693
PceI	AGGCCT	1 cut(s)	989
PciI	ACATGT	1 cut(s)	2038
PcsI	WCGNNNNNNNCGW	1 cut(s)	29
PctI	GAATGC	1 cut(s)	174
PdmI	GAANNNNTTC	1 cut(s)	1054
PfeI	GAWTC	4 cut(s)	34, 122, 968, 2045
PflMI	CCANNNNNTGG	1 cut(s)	925
PfoI	TCCNGGA	1 cut(s)	1270
PkrI	GCNGC	5 cut(s)	173, 304, 847, 1363, 1684
PpuMI	RGGWCCY	1 cut(s)	1203
PscI	ACATGT	1 cut(s)	2038
Psp5II	RGGWCCY	1 cut(s)	1203
Psp6I	CCWGG	4 cut(s)	924, 984, 1270, 1645
PspEI	GGTNACC	1 cut(s)	811
PspFI	CCCAGC	1 cut(s)	2107
PspGI	CCWGG	4 cut(s)	924, 984, 1270, 1645
PspN4I	GGNNCC	2 cut(s)	1204, 1355
PspPI	GGNCC	3 cut(s)	524, 1203, 2057
PspPPI	RGGWCCY	1 cut(s)	1203
PstI	CTGCAG	2 cut(s)	1254, 1594
PstNI	CAGNNNCTG	2 cut(s)	971, 1258
RsaI	GTAC	4 cut(s)	778, 1737, 1913, 1986
RsaNI	GTAC	4 cut(s)	777, 1736, 1912, 1985
RseI	CAYNNNNRTG	3 cut(s)	541, 551, 1530
SaqAI	TTAA	9 cut(s)	9, 180, 396, 483, 494, 822, 1023, 1208, 1488
SatI	GCNGC	5 cut(s)	172, 303, 846, 1362, 1683
Sau3AI	GATC	5 cut(s)	864, 1516, 1649, 1696, 1948
Sau96I	GGNCC	3 cut(s)	524, 1203, 2057
ScrFI	CCNGG	5 cut(s)	162, 926, 986, 1272, 1647
SduI	GDGCHC	2 cut(s)	435, 1973
SfaNI	GCATC	7 cut(s)	289, 520, 555, 729, 1113, 1962, 2120
SfcI	CTRYAG	2 cut(s)	1250, 1590
SfuI	TTCGAA	1 cut(s)	596
SinI	GGWCC	2 cut(s)	524, 1203
SmiMI	CAYNNNNRTG	3 cut(s)	541, 551, 1530
SmlI	CTYRAG	3 cut(s)	179, 1207, 2087
SmoI	CTYRAG	3 cut(s)	179, 1207, 2087
SseBI	AGGCCT	1 cut(s)	989
SsiI	CCGC	6 cut(s)	87, 171, 260, 467, 773, 1786
SspI	AATATT	1 cut(s)	138
SspMI	CTAG	2 cut(s)	351, 2188
StuI	AGGCCT	1 cut(s)	989
StyD4I	CCNGG	5 cut(s)	160, 924, 984, 1270, 1645
StyI	CCWWGG	2 cut(s)	755, 1133
TaaI	ACNGT	6 cut(s)	372, 817, 828, 1114, 1502, 1962
TaqI	TCGA	5 cut(s)	216, 330, 596, 1222, 2156
TaqII	GACCGA	2 cut(s)	524, 1410
TatI	WGTACW	1 cut(s)	1984
TauI	GCSGC	1 cut(s)	174
TfiI	GAWTC	4 cut(s)	34, 122, 968, 2045
Tru1I	TTAA	9 cut(s)	9, 180, 396, 483, 494, 822, 1023, 1208, 1488
Tru9I	TTAA	9 cut(s)	9, 180, 396, 483, 494, 822, 1023, 1208, 1488
TscAI	CASTG	4 cut(s)	522, 1259, 1809, 1933
TseFI	GTSAC	3 cut(s)	505, 1447, 1768
TseI	GCWGC	4 cut(s)	302, 845, 1361, 1682
Tsp45I	GTSAC	3 cut(s)	505, 1447, 1768
TspGWI	ACGGA	5 cut(s)	297, 308, 539, 1183, 1877
TspRI	CASTG	4 cut(s)	522, 1259, 1809, 1933
Van91I	CCANNNNNTGG	1 cut(s)	925
Vha464I	CTTAAG	2 cut(s)	179, 1207
VpaK11BI	GGWCC	2 cut(s)	524, 1203
XagI	CCTNNNNNAGG	1 cut(s)	1644
XapI	RAATTY	2 cut(s)	562, 592
XceI	RCATGY	2 cut(s)	665, 2042
XmiI	GTMKAC	1 cut(s)	748
XmnI	GAANNNNTTC	1 cut(s)	1054
XspI	CTAG	2 cut(s)	351, 2188

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.