Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0004695

Physical Location & Seq

Genomic Coordinates Forward (+)

74996676 .. 75000762

Gene Structure 4087 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0636600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2040 bp

ATGCCTCCTACATATTTTCCTCTCCGGTGGGAAAGCACCGGAGACCAATGGTGGTATGCTTCTCCGATTGACTATGCAGCCGCCAATGGACAGTATGACTTGGTCCGAGAGCTCATCCGCATTGACAGCAACCACCTCATCAAGCTCACATCTCTACGTAGAATTCGCCGCCTTGAGACTGTTTGGGATGATGAAGAGCAGTTCCATGGCGTAGCCAAGTGTCGTGCACATGTTGCGCGAAAGCTTTTCCATGAATGTGAGTCTAAACAGGGAAAGAACTCCCTCATTCGAGCTGGTTATGGTGGATGGCTCATTTACACAGCTTCGTCAGCTGGACAGCTTGGTTTTGTCCAAGAGTTGCTTGAGAGAAACCCTCTTCTTGTTTTCGGGGAAGGAGAGTTTGGCGTTACTGATATACTGTACGCTGCTGCTAGGAGCAAGAATGCTGAGGTTTTCAGGCTGCTGTTTGACTTTGCAGTTTCTCCACGATTTTCGGGCAGAGGTGGGGAATTGGAGGAACACATTGGGGAGATTCCTTGTGTTTATAAGAGGGAGATGGTTAACAGGGCGGTTCATGCTGCTGTCAGAGGAGGAAACTTGTTGGTTTTGAAGGAGCTTCTTTCGGATTGCAATGATGTTTTGGCTTATAGGGATGTTCAGGGATCCACTATTCTACATGCAGCAGCTGGAAAAGGACGGGTAGAGGTAGTGAAGTACCTTATAGCCGCATATGATATCATAAACTCCAAAGACCATCAGGGAAACACAGCATTGCATGTTGCAGCTTCTAGGGGCCAATTAGCTGCAGTGGAATCTCTTCTATCTGCATCTCCTTCATCAATGATTTCTACAAAAAACAACTCTGGAGAAACATTTCTCCATAAGGTTATATCTGGCTTCCAAACTCCTGCCTTCCGTAGATTGGACCGACAGATTCATCTCCTGAAGAACTTGGTCTGTGGGAGAGTCTTTGACATTGAAGAAGTCATCAATGCCAAAAACAATGAAGGCCGGACTGCCCTTCACACAGCAATCATTGGCAATGTTCACTCTGACTTGGTGCAACTTCTGATGATGTCTCGATCAATTGATGTCAATGTCCGGGATGTAGATGGCATGACTGCACTTGATTACCTCAGGCAATGGCCTCGTTCTGCATCCTCGGATATACTAATTAGGCAGTTGATTTCGGCTGGGGGGATCTTTGGTTGTCAGGACTATTACAGTGCAAGAAAAGCCATTGCTTCACACTTAAAGATGCAAGGCGATGGAGGCAGTCCTGGAACATCGTTTAAAATCTCCGATACTGAAATCTTTTTGTATACAGGAGTTGAAAATGTACCAGTTGCTAGTGCTGGTCACCAGCACAAGGTTAGTATAGGAAGCAATTCATCTTCACCGGAACTAAATCCACGCAACACAACTGATGAGAACCAGAGCTCAATTAGTACTAAAAAGCCTTCAGGTTCTGTAAACCATGCAGCACAACGACTGAAACGTGCAATAGGGTGGCCCCGGATCAAAGAGAAGAAGCCTGAAAGATTCAAGAAATCAGTAGATTTTGGCAGCACTACTTCAGATGAGGCTCCCACACCACTTCGCCAGAGATTCTCAAAGGCCTCCTCATCACTTCCCAATAACAAAAGAACACTCGCAGTGAGGAGTAATCAATCAAGTCCAACCGCCAAGAAGAAATTCGCTTCGGGTTTAAGGCATGGTGTAATGCAGGCAATCCCACACATAACTGTCCCAGGCCGTTCGCGCTCTAGCTCATTTTCGAAATCATCATCACTCTCTTCACCTAGTTCTCTAGATAAACAGAAAGGTGTTTGCATTGACACTGATGCCACTGGACCATCTTGGTCCAATCAAGTAGATGATGATGACACCCCAAATTTGGGTAAACAAGGCAGCCTTAACAGAAGGTTGAGGAGGCATTACTTCTGTTTTGGGGCATCAGGCCTATCTGTGAAGCACCCGGTTAGCAGGCAACATCAGAACCAAAGCTTCAAGCCCCCTCCTGTTATTTCAGTGGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002181 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0005840 GO:0005844 GO:0005886 GO:0005911 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0015935 GO:0016020 GO:0019538 GO:0022626 GO:0022627 GO:0030054 GO:0030312 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0034645 GO:0042788 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0055044 GO:0070013 GO:0071704 GO:0071944 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko00030 ko00710 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 ko03010 map00030 map00710 map01100 map01110 map01120 map01130 map01200 map01230 map03010

Pfam Domains

Protein Families

Ribosomal_S3Ae

Protein Analysis

679

Amino Acids

74.76

Weight (kDa)

9.57

Isoelectric Point (pI)

46.56

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	192 - 275	3.9e-15	Ankyrin repeats (3 copies)
Ank_5	PF13857	330 - 378	5.4e-07	Ankyrin repeats (many copies)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004695)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G04840 AT4G34670
fragaria_vesca	FvH4_4g00850 FvH4_6g03341
malus_domestica	MD13G1198000.v1.1 MD16G1198000.v1.1
prunus_persica	Prupe.1G019500_v2.0.a1 Prupe.6G340700_v2.0.a1
pyrus_communis	pycom16g16690
rosa_chinensis	RchiOBHm_Chr3g0451851 RchiOBHm_Chr4g0387481
rosa_laevigata	RLG00000010119 RLG00000025643
rosa_multiflora	Rmu_sc0002901.1_g000009 Rmu_sc0006510.1_g000011 Rmu_sc0009161.1_g000004 Rmu_sc0011414.1_g000002
rosa_roxburghii	Rroxscaffold_164G00436260 Rroxscaffold_5G00334160 Rroxscaffold_6G00429030
rosa_rugosa	Rorug02G0636600 Rorug03G0309800
rosa_samantha	Rh3AG038500 Rh3BG039800 Rh3CG038300 Rh3DG039100 Rh4BG010800 Rh4CG017300 Rh4DG012000
rosa_wichuraiana	Rw3G002870 Rw4G001020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	546
AccI	GTMKAC	1 cut(s)	1322
AccII	CGCG	2 cut(s)	238, 1762
AciI	CCGC	6 cut(s)	81, 118, 169, 569, 726, 1683
AclWI	GGATC	4 cut(s)	657, 670, 1208, 1526
AcsI	RAATTY	3 cut(s)	162, 1694, 1894
AcuI	CTGAAG	3 cut(s)	965, 1446, 1560
AfaI	GTAC	4 cut(s)	422, 716, 1341, 1450
AfiI	CCNNNNNNNGG	4 cut(s)	922, 1369, 1897, 1898
AflIII	ACRYGT	1 cut(s)	229
AgsI	TTSAA	5 cut(s)	610, 980, 1334, 1546, 2011
AjnI	CCWGG	2 cut(s)	1279, 1750
AjuI	GAANNNNNNNTTGG	4 cut(s)	384, 416, 1679, 1711
Alw21I	GWGCWC	3 cut(s)	114, 229, 1442
Alw26I	GTCTC	3 cut(s)	36, 170, 1083
Alw44I	GTGCAC	1 cut(s)	225
AlwI	GGATC	4 cut(s)	657, 670, 1208, 1526
AlwNI	CAGNNNCTG	2 cut(s)	686, 1469
AoxI	GGCC	7 cut(s)	793, 1009, 1145, 1511, 1617, 1753, 1960
ApaLI	GTGCAC	1 cut(s)	225
ApoI	RAATTY	3 cut(s)	162, 1694, 1894
Asp700I	GAANNNNTTC	4 cut(s)	816, 873, 1387, 1694
AspLEI	GCGC	2 cut(s)	238, 1764
AspS9I	GGNCC	6 cut(s)	103, 793, 925, 1512, 1853, 1863
AsuC2I	CCSGG	3 cut(s)	1103, 1516, 1979
AsuHPI	GGTGA	3 cut(s)	1352, 1389, 1791
AsuII	TTCGAA	1 cut(s)	1778
AvaII	GGWCC	4 cut(s)	103, 925, 1853, 1863
AxyI	CCTNAGG	1 cut(s)	1136
BaeGI	GKGCMC	1 cut(s)	229
BamHI	GGATCC	1 cut(s)	662
BanII	GRGCYC	2 cut(s)	114, 1442
Bbv12I	GWGCWC	3 cut(s)	114, 229, 1442
BbvCI	CCTCAGC	1 cut(s)	447
BccI	CCATC	6 cut(s)	300, 550, 762, 1106, 1262, 1864
BceAI	ACGGC	1 cut(s)	1740
BcgI	CGANNNNNNTGC	2 cut(s)	1130, 1164
BciT130I	CCWGG	2 cut(s)	1281, 1752
BcnI	CCSGG	3 cut(s)	1103, 1516, 1979
BcoDI	GTCTC	3 cut(s)	36, 170, 1083
BfaI	CTAG	6 cut(s)	432, 789, 1350, 1767, 1803, 1811
BfmI	CTRYAG	1 cut(s)	804
BmcAI	AGTACT	1 cut(s)	1450
Bme1390I	CCNGG	5 cut(s)	1103, 1281, 1516, 1752, 1979
Bme18I	GGWCC	4 cut(s)	103, 925, 1853, 1863
BmgT120I	GGNCC	6 cut(s)	103, 793, 925, 1512, 1853, 1863
BmiI	GGNNCC	4 cut(s)	664, 794, 1514, 1587
BmrFI	CCNGG	5 cut(s)	1103, 1281, 1516, 1752, 1979
BmsI	GCATC	5 cut(s)	836, 1166, 1248, 1834, 1964
BplI	GAGNNNNNCTC	2 cut(s)	358, 390
BpmI	CTGGAG	1 cut(s)	885
Bpu10I	CCTNAGC	1 cut(s)	447
Bpu14I	TTCGAA	1 cut(s)	1778
BpuEI	CTTGAG	2 cut(s)	194, 383
BpuMI	CCSGG	3 cut(s)	1103, 1516, 1979
BsaAI	YACGTR	1 cut(s)	158
BsaI	GGTCTC	1 cut(s)	36
BsaJI	CCNNGG	4 cut(s)	205, 1161, 1514, 1750
BsaWI	WCCGGW	3 cut(s)	24, 38, 1399
Bsc4I	CCNNNNNNNGG	4 cut(s)	922, 1369, 1897, 1898
Bse1I	ACTGG	2 cut(s)	1343, 1855
Bse21I	CCTNAGG	1 cut(s)	1136
Bse3DI	GCAATG	5 cut(s)	637, 770, 1048, 1148, 1239
BseBI	CCWGG	2 cut(s)	1281, 1752
BseDI	CCNNGG	4 cut(s)	205, 1161, 1514, 1750
BseGI	GGATG	6 cut(s)	114, 193, 311, 658, 1111, 1157
BseLI	CCNNNNNNNGG	4 cut(s)	922, 1369, 1897, 1898
BseMI	GCAATG	5 cut(s)	637, 770, 1048, 1148, 1239
BseMII	CTCAG	2 cut(s)	438, 1150
BseNI	ACTGG	2 cut(s)	1343, 1855
BseRI	GAGGAG	4 cut(s)	603, 1612, 1675, 1945
BseSI	GKGCMC	1 cut(s)	229
BseYI	CCCAGC	1 cut(s)	1193
BsgI	GTGCAG	1 cut(s)	1107
Bsh1236I	CGCG	2 cut(s)	238, 1762
BshFI	GGCC	7 cut(s)	795, 1011, 1147, 1513, 1619, 1755, 1962
BsiHKAI	GWGCWC	3 cut(s)	114, 229, 1442
BsiSI	CCGG	7 cut(s)	25, 39, 1012, 1102, 1400, 1516, 1979
BslFI	GGGAC	1 cut(s)	1733
BslI	CCNNNNNNNGG	4 cut(s)	922, 1369, 1897, 1898
BsmAI	GTCTC	3 cut(s)	36, 170, 1083
BsmFI	GGGAC	1 cut(s)	1733
BsmI	GAATGC	1 cut(s)	448
BsnI	GGCC	7 cut(s)	795, 1011, 1147, 1513, 1619, 1755, 1962
Bso31I	GGTCTC	1 cut(s)	36
Bsp119I	TTCGAA	1 cut(s)	1778
Bsp1286I	GDGCHC	3 cut(s)	114, 229, 1442
Bsp143I	GATC	4 cut(s)	662, 1082, 1200, 1518
Bsp19I	CCATGG	1 cut(s)	205
BspACI	CCGC	6 cut(s)	81, 118, 169, 569, 726, 1683
BspANI	GGCC	7 cut(s)	795, 1011, 1147, 1513, 1619, 1755, 1962
BspCNI	CTCAG	2 cut(s)	439, 1149
BspFNI	CGCG	2 cut(s)	238, 1762
BspLI	GGNNCC	4 cut(s)	664, 794, 1514, 1587
BspMAI	CTGCAG	1 cut(s)	808
BspPI	GGATC	4 cut(s)	657, 670, 1208, 1526
BspQI	GCTCTTC	1 cut(s)	189
BspT104I	TTCGAA	1 cut(s)	1778
BspTNI	GGTCTC	1 cut(s)	36
BsrDI	GCAATG	5 cut(s)	637, 770, 1048, 1148, 1239
BsrI	ACTGG	2 cut(s)	1343, 1855
BssECI	CCNNGG	4 cut(s)	205, 1161, 1514, 1750
BssMI	GATC	4 cut(s)	662, 1082, 1200, 1518
BssNAI	GTATAC	1 cut(s)	1323
BssT1I	CCWWGG	1 cut(s)	205
Bst1107I	GTATAC	1 cut(s)	1323
Bst2UI	CCWGG	2 cut(s)	1281, 1752
Bst4CI	ACNGT	5 cut(s)	93, 181, 420, 1226, 1747
Bst6I	CTCTTC	4 cut(s)	189, 381, 822, 1801
BstAPI	GCANNNNNTGC	1 cut(s)	233
BstBAI	YACGTR	1 cut(s)	158
BstBI	TTCGAA	1 cut(s)	1778
BstC8I	GCNNGC	2 cut(s)	1728, 1988
BstDEI	CTNAG	2 cut(s)	447, 1136
BstDSI	CCRYGG	1 cut(s)	205
BstEII	GGTNACC	1 cut(s)	1358
BstF5I	GGATG	6 cut(s)	114, 193, 311, 658, 1111, 1157
BstFNI	CGCG	2 cut(s)	238, 1762
BstHHI	GCGC	2 cut(s)	238, 1764
BstKTI	GATC	4 cut(s)	665, 1085, 1203, 1521
BstMAI	GTCTC	3 cut(s)	36, 170, 1083
BstMBI	GATC	4 cut(s)	662, 1082, 1200, 1518
BstMWI	GCNNNNNNNGC	7 cut(s)	126, 233, 329, 575, 1235, 1272, 1761
BstNI	CCWGG	2 cut(s)	1281, 1752
BstNSI	RCATGY	3 cut(s)	233, 680, 779
BstPI	GGTNACC	1 cut(s)	1358
BstSCI	CCNGG	5 cut(s)	1101, 1279, 1514, 1750, 1977
BstSFI	CTRYAG	1 cut(s)	804
BstSLI	GKGCMC	1 cut(s)	229
BstSNI	TACGTA	1 cut(s)	158
BstUI	CGCG	2 cut(s)	238, 1762
BstX2I	RGATCY	2 cut(s)	662, 1200
BstYI	RGATCY	2 cut(s)	662, 1200
BstZ17I	GTATAC	1 cut(s)	1323
Bsu36I	CCTNAGG	1 cut(s)	1136
BsuRI	GGCC	7 cut(s)	795, 1011, 1147, 1513, 1619, 1755, 1962
BtgI	CCRYGG	1 cut(s)	205
BtgZI	GCGATG	1 cut(s)	1281
BtsCI	GGATG	6 cut(s)	114, 193, 311, 658, 1111, 1157
BtsI	GCAGTG	2 cut(s)	813, 1662
BtsIMutI	CAGTG	6 cut(s)	813, 1231, 1662, 1839, 1848, 2037
Cac8I	GCNNGC	2 cut(s)	1728, 1988
CaiI	CAGNNNCTG	2 cut(s)	686, 1469
CfoI	GCGC	2 cut(s)	238, 1764
Cfr13I	GGNCC	6 cut(s)	103, 793, 925, 1512, 1853, 1863
Csp6I	GTAC	4 cut(s)	421, 715, 1340, 1449
CviAII	CATG	9 cut(s)	206, 230, 251, 575, 677, 776, 1117, 1478, 1715
CviQI	GTAC	4 cut(s)	421, 715, 1340, 1449
DdeI	CTNAG	2 cut(s)	447, 1136
DpnI	GATC	4 cut(s)	664, 1084, 1202, 1520
DpnII	GATC	4 cut(s)	662, 1082, 1200, 1518
DraI	TTTAAA	1 cut(s)	1294
Eam1104I	CTCTTC	4 cut(s)	189, 381, 822, 1801
EarI	CTCTTC	4 cut(s)	189, 381, 822, 1801
Ecl136II	GAGCTC	2 cut(s)	112, 1440
Eco105I	TACGTA	1 cut(s)	158
Eco130I	CCWWGG	1 cut(s)	205
Eco147I	AGGCCT	2 cut(s)	1619, 1962
Eco24I	GRGCYC	2 cut(s)	114, 1442
Eco31I	GGTCTC	1 cut(s)	36
Eco32I	GATATC	1 cut(s)	736
Eco47I	GGWCC	4 cut(s)	103, 925, 1853, 1863
Eco53kI	GAGCTC	2 cut(s)	112, 1440
Eco57I	CTGAAG	3 cut(s)	965, 1446, 1560
Eco81I	CCTNAGG	1 cut(s)	1136
Eco91I	GGTNACC	1 cut(s)	1358
EcoICRI	GAGCTC	2 cut(s)	112, 1440
EcoO65I	GGTNACC	1 cut(s)	1358
EcoRI	GAATTC	1 cut(s)	162
EcoRII	CCWGG	2 cut(s)	1279, 1750
EcoRV	GATATC	1 cut(s)	736
EcoT14I	CCWWGG	1 cut(s)	205
EcoT38I	GRGCYC	2 cut(s)	114, 1442
ErhI	CCWWGG	1 cut(s)	205
FaeI	CATG	9 cut(s)	209, 233, 254, 578, 680, 779, 1120, 1481, 1718
FalI	AAGNNNNNCTT	4 cut(s)	345, 377, 1899, 1931
FaqI	GGGAC	1 cut(s)	1733
FatI	CATG	9 cut(s)	205, 229, 250, 574, 676, 775, 1116, 1477, 1714
FauNDI	CATATG	1 cut(s)	730
FblI	GTMKAC	1 cut(s)	1322
FokI	GGATG	6 cut(s)	101, 200, 318, 665, 1118, 1144
FriOI	GRGCYC	2 cut(s)	114, 1442
FspBI	CTAG	6 cut(s)	432, 789, 1350, 1767, 1803, 1811
GlaI	GCGC	2 cut(s)	237, 1763
GsaI	CCCAGC	1 cut(s)	1197
GsuI	CTGGAG	1 cut(s)	885
HaeIII	GGCC	7 cut(s)	795, 1011, 1147, 1513, 1619, 1755, 1962
HapII	CCGG	7 cut(s)	25, 39, 1012, 1102, 1400, 1516, 1979
HhaI	GCGC	2 cut(s)	238, 1764
Hin1II	CATG	9 cut(s)	209, 233, 254, 578, 680, 779, 1120, 1481, 1718
Hin6I	GCGC	2 cut(s)	236, 1762
HinP1I	GCGC	2 cut(s)	236, 1762
HincII	GTYRAC	1 cut(s)	562
HindII	GTYRAC	1 cut(s)	562
HindIII	AAGCTT	2 cut(s)	242, 2005
HinfI	GANTC	7 cut(s)	260, 532, 812, 934, 966, 1542, 1608
HpaI	GTTAAC	1 cut(s)	562
HpaII	CCGG	7 cut(s)	25, 39, 1012, 1102, 1400, 1516, 1979
HphI	GGTGA	3 cut(s)	1352, 1389, 1791
Hpy166II	GTNNAC	6 cut(s)	227, 562, 1048, 1323, 1474, 1904
Hpy188III	TCNNGA	6 cut(s)	864, 943, 1080, 1214, 1546, 1811
Hpy8I	GTNNAC	6 cut(s)	227, 562, 1048, 1323, 1474, 1904
HpyAV	CCTTC	8 cut(s)	386, 604, 843, 922, 1001, 1031, 1470, 1917
HpyCH4III	ACNGT	5 cut(s)	93, 181, 420, 1226, 1747
HpyCH4IV	ACGT	2 cut(s)	157, 1498
HpyF10VI	GCNNNNNNNGC	7 cut(s)	126, 233, 329, 575, 1235, 1272, 1761
HpyF3I	CTNAG	2 cut(s)	447, 1136
HpySE526I	ACGT	2 cut(s)	157, 1498
Hsp92II	CATG	9 cut(s)	209, 233, 254, 578, 680, 779, 1120, 1481, 1718
HspAI	GCGC	2 cut(s)	236, 1762
KspAI	GTTAAC	1 cut(s)	562
Kzo9I	GATC	4 cut(s)	662, 1082, 1200, 1518
LguI	GCTCTTC	1 cut(s)	189
LmnI	GCTCC	3 cut(s)	435, 613, 1591
LweI	GCATC	5 cut(s)	836, 1166, 1248, 1834, 1964
MaeI	CTAG	6 cut(s)	432, 789, 1350, 1767, 1803, 1811
MaeII	ACGT	2 cut(s)	157, 1498
MaeIII	GTNAC	2 cut(s)	406, 1358
MalI	GATC	4 cut(s)	664, 1084, 1202, 1520
MboI	GATC	4 cut(s)	662, 1082, 1200, 1518
MboII	GAAGA	9 cut(s)	206, 368, 809, 958, 992, 1386, 1540, 1702, 1788
MfeI	CAATTG	1 cut(s)	1086
MflI	RGATCY	2 cut(s)	662, 1200
MhlI	GDGCHC	3 cut(s)	114, 229, 1442
MluCI	AATT	9 cut(s)	162, 509, 797, 1086, 1173, 1387, 1443, 1694, 1894
MlyI	GAGTC	2 cut(s)	269, 975
MmeI	TCCRAC	1 cut(s)	1703
MroXI	GAANNNNTTC	4 cut(s)	816, 873, 1387, 1694
MseI	TTAA	6 cut(s)	561, 1253, 1293, 1709, 1917, 2038
MslI	CAYNNNNRTG	1 cut(s)	255
MspA1I	CMGCKG	2 cut(s)	332, 686
MspI	CCGG	7 cut(s)	25, 39, 1012, 1102, 1400, 1516, 1979
MspR9I	CCNGG	5 cut(s)	1103, 1281, 1516, 1752, 1979
MunI	CAATTG	1 cut(s)	1086
Mva1269I	GAATGC	1 cut(s)	448
MvaI	CCWGG	2 cut(s)	1281, 1752
MvnI	CGCG	2 cut(s)	238, 1762
MwoI	GCNNNNNNNGC	7 cut(s)	126, 233, 329, 575, 1235, 1272, 1761
NciI	CCSGG	3 cut(s)	1103, 1516, 1979
NcoI	CCATGG	1 cut(s)	205
NdeI	CATATG	1 cut(s)	730
NdeII	GATC	4 cut(s)	662, 1082, 1200, 1518
NlaIII	CATG	9 cut(s)	209, 233, 254, 578, 680, 779, 1120, 1481, 1718
NlaIV	GGNNCC	4 cut(s)	664, 794, 1514, 1587
NmuCI	GTSAC	1 cut(s)	1358
NspI	RCATGY	3 cut(s)	233, 680, 779
NspV	TTCGAA	1 cut(s)	1778
PceI	AGGCCT	2 cut(s)	1619, 1962
PciI	ACATGT	1 cut(s)	229
PciSI	GCTCTTC	1 cut(s)	189
PcsI	WCGNNNNNNNCGW	1 cut(s)	1495
PctI	GAATGC	1 cut(s)	448
PdmI	GAANNNNTTC	4 cut(s)	816, 873, 1387, 1694
PfeI	GAWTC	5 cut(s)	532, 812, 934, 1542, 1608
PflFI	GACNNNGTC	1 cut(s)	101
PfoI	TCCNGGA	2 cut(s)	1101, 1279
PleI	GAGTC	2 cut(s)	268, 974
PpsI	GAGTC	2 cut(s)	268, 974
Ppu21I	YACGTR	1 cut(s)	158
PscI	ACATGT	1 cut(s)	229
PsiI	TTATAA	1 cut(s)	546
Psp124BI	GAGCTC	2 cut(s)	114, 1442
Psp6I	CCWGG	2 cut(s)	1279, 1750
PspEI	GGTNACC	1 cut(s)	1358
PspFI	CCCAGC	1 cut(s)	1193
PspGI	CCWGG	2 cut(s)	1279, 1750
PspN4I	GGNNCC	4 cut(s)	664, 794, 1514, 1587
PspPI	GGNCC	6 cut(s)	103, 793, 925, 1512, 1853, 1863
PstI	CTGCAG	1 cut(s)	808
PstNI	CAGNNNCTG	2 cut(s)	686, 1469
PsuI	RGATCY	2 cut(s)	662, 1200
PsyI	GACNNNGTC	1 cut(s)	101
PvuII	CAGCTG	2 cut(s)	332, 686
RsaI	GTAC	4 cut(s)	422, 716, 1341, 1450
RsaNI	GTAC	4 cut(s)	421, 715, 1340, 1449
RseI	CAYNNNNRTG	1 cut(s)	255
SacI	GAGCTC	2 cut(s)	114, 1442
SapI	GCTCTTC	1 cut(s)	189
SaqAI	TTAA	6 cut(s)	561, 1253, 1293, 1709, 1917, 2038
Sau3AI	GATC	4 cut(s)	662, 1082, 1200, 1518
Sau96I	GGNCC	6 cut(s)	103, 793, 925, 1512, 1853, 1863
ScaI	AGTACT	1 cut(s)	1450
SchI	GAGTC	2 cut(s)	269, 975
ScrFI	CCNGG	5 cut(s)	1103, 1281, 1516, 1752, 1979
SduI	GDGCHC	3 cut(s)	114, 229, 1442
SfaNI	GCATC	5 cut(s)	836, 1166, 1248, 1834, 1964
SfcI	CTRYAG	1 cut(s)	804
SfuI	TTCGAA	1 cut(s)	1778
SinI	GGWCC	4 cut(s)	103, 925, 1853, 1863
SmiMI	CAYNNNNRTG	1 cut(s)	255
SmlI	CTYRAG	2 cut(s)	173, 362
SmoI	CTYRAG	2 cut(s)	173, 362
SnaBI	TACGTA	1 cut(s)	158
Sse9I	AATT	9 cut(s)	162, 509, 797, 1086, 1173, 1387, 1443, 1694, 1894
SseBI	AGGCCT	2 cut(s)	1619, 1962
SsiI	CCGC	6 cut(s)	81, 118, 169, 569, 726, 1683
SspMI	CTAG	6 cut(s)	432, 789, 1350, 1767, 1803, 1811
SstI	GAGCTC	2 cut(s)	114, 1442
StuI	AGGCCT	2 cut(s)	1619, 1962
StyD4I	CCNGG	5 cut(s)	1101, 1279, 1514, 1750, 1977
StyI	CCWWGG	1 cut(s)	205
TaaI	ACNGT	5 cut(s)	93, 181, 420, 1226, 1747
TaiI	ACGT	2 cut(s)	160, 1501
TaqI	TCGA	3 cut(s)	289, 1081, 1778
TaqII	GACCGA	1 cut(s)	942
TasI	AATT	9 cut(s)	162, 509, 797, 1086, 1173, 1387, 1443, 1694, 1894
TatI	WGTACW	1 cut(s)	1448
TauI	GCSGC	3 cut(s)	83, 171, 728
TfiI	GAWTC	5 cut(s)	532, 812, 934, 1542, 1608
Tru1I	TTAA	6 cut(s)	561, 1253, 1293, 1709, 1917, 2038
Tru9I	TTAA	6 cut(s)	561, 1253, 1293, 1709, 1917, 2038
TscAI	CASTG	6 cut(s)	813, 1231, 1662, 1846, 1855, 2037
TseFI	GTSAC	1 cut(s)	1358
Tsp45I	GTSAC	1 cut(s)	1358
TspDTI	ATGAA	7 cut(s)	207, 267, 563, 825, 926, 1020, 1380
TspGWI	ACGGA	1 cut(s)	905
TspRI	CASTG	6 cut(s)	813, 1231, 1662, 1846, 1855, 2037
Tth111I	GACNNNGTC	1 cut(s)	101
VneI	GTGCAC	1 cut(s)	225
VpaK11BI	GGWCC	4 cut(s)	103, 925, 1853, 1863
XapI	RAATTY	3 cut(s)	162, 1694, 1894
XbaI	TCTAGA	1 cut(s)	1810
XceI	RCATGY	3 cut(s)	233, 680, 779
XmiI	GTMKAC	1 cut(s)	1322
XmnI	GAANNNNTTC	4 cut(s)	816, 873, 1387, 1694
XspI	CTAG	6 cut(s)	432, 789, 1350, 1767, 1803, 1811
ZrmI	AGTACT	1 cut(s)	1450

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.