Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0003973

Physical Location & Seq

Genomic Coordinates Forward (+)

2392413 .. 2397113

Gene Structure 4701 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g04390.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2868 bp

ATGGAGAACAGCATAGCCTCAGATTTAGAGCTTGCAGAGACGAAGCAGAGCAATCTGAAGAGAGCTTACGAGAGCTTAAACGCCCAAGCTTCCTCCTTTATGGCCCTAGGTCTCCAGTGGAAGGACGTCGAGGACCACCTGGCCGAAACCCGGGCCAAAATCCAGACCCGGTTCAACGAGCTCCAGGCCCGCGAGGCCCAAATCGCCGACCAGGTCAGAAAGCTGGAGTCTTTGGAGGAGGACAAGGCCAAGACGGTGAGGGAGGTGGAGCGCGGTAAGAATAACTTGCGGTCTATCGAAATCCTGATTGCGGAAAACTCTGAAGAGCTTTGTGTGAAGGAGAGGCGGTTTGAGGAGGTTGAGAGGTTGGTGAGAGAAAAGGAGAGGAGTTTGAGGGAGCGGAGCGAGGAGCTGAGGTTTGTGGAGAGAGGGATCGAGGAGAGGGCTAGGGAGGTTGTGGTTAAGGAGAAGGAAGTGAAAAGGGTGAGACGAGTGTTGGATGAGTGCTGTTGTGATGTGAAGAGGAGGAAGAGGGAGTGTGTGTTGAGAAATGAGGAGGTTAAGTCTGCGGAGAGGACGATTGAGAAGTGTAATAAGGAGTTGAGTGTGAAGTGGGAGGAAATGGAGGCGATTCAGAGGTCGATGGTGGCGTATTCGGAGAGGATTAGGGTGAAAGAGAGAGTTATTAAGGAGATGGAGATGAAGGTGGAGGAGTTTGAAGTGCATAAGAAGGCAATGGAGGAGTGGTGTGGTGGTCTTGAGGTGAAGAAGAAGGGGTTTGAAGGGTGGGTGGAGAAGGTTGAGAAGAGGGAGAGGGAATTTGAGTTGAGAGTTGAGGAGATTGATTTGATTGGGAAGAGGGTCAATGAGTGTGTGAATGAGGCTCAGTTGAAATTGGAGAGGGATTTTCGTTCACTCGAGGAATTGAGACAGGAGAATGTGAAGCATTTTGAGTTGCTTGAGAAATCGGTACAAGAGCATGTTCATGAGCTTGAGATGAAAGAGAGGAGGCTTGAAGAAAAGGAGAAAGAGCTTGAATTGAAACAAAAACAATTGGATTCTGTTACAAAAGCTTTTGGGGAAAAAATGATGTCAAAGGAGAAAGTTAGTGTTATTCATCCTTCAGTGAAAGTTCAACCATTGTTACATGACCCTGCAAACATTGTTGCCCTATCTTCAACAGCAAGTAATGCTAGAGGCTTGCAGTTGATAGTGAGTGAGCATTTGAAGAGAACTGATTTAATGAGTAGAGAAATGTCGGTTATTCTTCAAGCCTCAACAGACCCAGCAGGATTGGTTTTGGATGCAATGCAGGGATTTTACCCTACAAATTCAACTGTGGACAACAGGGAGCTAGATTCGAATTTAAGAGTTATTAGAAGGAGTTGTATTGTATGGCTACAGGAGTTACAGAGATTCTCGCCTCGAATTAATGCTCAGGTCAGGGAAAAGGCAATGAAGTTAGCAGCTGAGTGGAAAGCTAAGCTGACAATGACTACTGAGAGCAGGTTGGAGGTCTTGGGGTTCTTACGGCTTGTTACTACGTATGGATTGACCTCCATGTATGATGCTAAGGAGCTTCACAGTCTTCTTTCTATAGTTGCTCAGCCTGGACAAGCAACTGATTTATTCCAGGCCCTTGATGTCTCAGATAAGGCATATGCATGCAGCACAATTTCTTTCCCATTTAGAATTGAGGAACCGGAATGTTCAGTGGCCAAATGTGCAGCTCCCTCTTCATCTCCAAATCTTCAACTACATACAACCAGAGAAGAAAACTATTTCCAGGGGTTTATAGTTGAGCGTTTGAGTGAGAATAATTCAGTACAGGAAAAAATGCTAGCCACTCTTCAAGTGTCATCAGACCCAGCACAAATTGTGTTGGAAATGATGCAGAGCTCTTTTGGTCAGTTTTGGAGAGAAGGAGGTTTTTGTTCAGAAGTAAATGTCATGAAGGGTTACATTTACCTATTGGAGACACTGATGAGAGTGTCAAAGCACATTGGATCTTGTGTGAAAGAAGATGCAAAAAAGCTGGCAGTGCAGTGGAAAGCTAGAATGAAAGCCGATTCTGGCAACTCGTTGGAGATTTTACTATTTTTGCAGTTTATAGCTACATATGAATTGCTCTCTACCATAAATGGAGGTGACATTGTCAATCTTCTTGGGGTGATTTTCCGGCACAGACAGGCTCTAGAACTATGTCAAGCTGTTGGTTTTGCAGATAAGATTCCTGGTTTTATTCAGAGTCTTATTGAGAGGAAGCAACTAATTGATGCTGTTAGATGCATTTGCATCTTCAAGTTAACCGGCAAGTTCCCTGCCGTACAACTATTAAAAGATCATGTGCATGAGGCAAAAAACTTTGCTAGTGAAATTTGCAGGAATAAATTGTCATTTGGTGAAACGGAGAAGGTTGTAGATGGTCTAATAGACATTGAAGTACAAATAGTTCAGCTGGGAAGACTGAAGGAGCATTGCAGAAGTTTGGCACCATCTCTGGCCTCCACAGTTGATCAACAAGATCAGAGAAAAAGGAAGAGGCCAAGCACCAGCACATCTGCTCCCTTTTTTCAACCACAACGACAGCTTGAACAAAGTAATCATCAGACAGCTATATCCACTGCTGTACCCTATGCATTGCCGATTTCCACGTCAAGATATTCAGAGTCAAGTTCGTCATCTGGGTCGTATGTAAAGTATGGACTCCGTGGGCAGTTTGGTATGGCGGCCAATGACCATGCAAATGGTGCTAATTCTGAAGGTGGCTTGATGCTAAGTTTGAAAGGCCAATATCTATCAAATTCCAGAAATCCACTCCCAGTGCACAGCGCTGATCATCACCATTCTGTAGTCATCCTCGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Frigida

Protein Analysis

956

Amino Acids

109.25

Weight (kDa)

6.66

Isoelectric Point (pI)

52.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Frigida	PF07899	397 - 552	2.3e-30	Frigida-like protein
Frigida	PF07899	595 - 798	9.5e-46	Frigida-like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003973)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G27220 AT5G27220 AT5G27220 AT5G27220
fragaria_vesca	FvH4_6g04390
malus_domestica	MD04G1214300.v1.1 MD04G1214400.v1.1 MD04G1214500.v1.1 MD12G1228900.v1.1 MD12G1229100.v1.1
prunus_persica	Prupe.6G334100_v2.0.a1 Prupe.6G334200_v2.0.a1 Prupe.6G334200_v2.0.a1 Prupe.6G334200_v2.0.a1 Prupe.6G334400_v2.0.a1 Prupe.6G334500_v2.0.a1
pyrus_communis	pycom04g18950 pycom12g21350 pycom12g21360
rosa_chinensis	RchiOBHm_Chr3g0453001
rosa_laevigata	RLG00000025551
rosa_multiflora	Rmu_co8146304.1_g000001 Rmu_co8342113.1_g000001 Rmu_sc0005888.1_g000003
rosa_roxburghii	Rroxscaffold_6G00430100
rosa_rugosa	Rorug02G0645100 Rorug02G0645200 Rorug02G0645300
rosa_samantha	Rh3AG047500 Rh3BG050000 Rh3CG048800 Rh3DG049600
rosa_wichuraiana	Rw3G003720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	129
Acc36I	ACCTGC	1 cut(s)	1497
AccB1I	GGYRCC	1 cut(s)	2491
AccBSI	CCGCTC	1 cut(s)	400
AccII	CGCG	2 cut(s)	192, 273
AciI	CCGC	8 cut(s)	190, 273, 289, 311, 346, 400, 569, 2729
AclWI	GGATC	2 cut(s)	440, 2014
AcoI	YGGCCR	3 cut(s)	141, 1716, 2730
AcsI	RAATTY	5 cut(s)	818, 1330, 1363, 2376, 2803
AcuI	CTGAAG	5 cut(s)	77, 342, 1107, 2489, 2781
AcyI	GRCGYC	1 cut(s)	126
AfaI	GTAC	5 cut(s)	972, 1827, 2328, 2445, 2631
AfeI	AGCGCT	1 cut(s)	2833
AfiI	CCNNNNNNNGG	3 cut(s)	121, 150, 310
AjiI	CACGTC	1 cut(s)	2655
AjnI	CCWGG	7 cut(s)	138, 183, 210, 1609, 1632, 1785, 2233
Alw21I	GWGCWC	3 cut(s)	183, 1901, 2829
Alw26I	GTCTC	6 cut(s)	32, 116, 481, 922, 1651, 1970
Alw44I	GTGCAC	1 cut(s)	2825
AlwI	GGATC	2 cut(s)	440, 2014
Ama87I	CYCGRG	2 cut(s)	150, 917
Aor51HI	AGCGCT	1 cut(s)	2833
ApaLI	GTGCAC	1 cut(s)	2825
ApeKI	GCWGC	3 cut(s)	1466, 1668, 1727
ApoI	RAATTY	5 cut(s)	818, 1330, 1363, 2376, 2803
AseI	ATTAAT	1 cut(s)	1431
AspA2I	CCTAGG	1 cut(s)	106
AspLEI	GCGC	2 cut(s)	273, 2834
AspS9I	GGNCC	6 cut(s)	103, 133, 153, 187, 196, 1636
AsuC2I	CCSGG	3 cut(s)	151, 152, 169
AsuHPI	GGTGA	9 cut(s)	268, 382, 496, 682, 775, 2159, 2182, 2414, 2834
AsuII	TTCGAA	1 cut(s)	1361
AsuNHI	GCTAGC	1 cut(s)	1840
AvaI	CYCGRG	2 cut(s)	150, 917
AvaII	GGWCC	1 cut(s)	133
AvrII	CCTAGG	1 cut(s)	106
BaeGI	GKGCMC	1 cut(s)	2829
BaeI	ACNNNNGTAYC	2 cut(s)	2613, 2646
BalI	TGGCCA	1 cut(s)	1718
BanI	GGYRCC	1 cut(s)	2491
BanII	GRGCYC	2 cut(s)	183, 1901
BarI	GAAGNNNNNNTAC	2 cut(s)	50, 82
BbsI	GAAGAC	2 cut(s)	1580, 2470
Bbv12I	GWGCWC	3 cut(s)	183, 1901, 2829
BbvCI	CCTCAGC	1 cut(s)	413
BbvI	GCAGC	3 cut(s)	1478, 1680, 1739
BccI	CCATC	4 cut(s)	637, 688, 2417, 2503
BceAI	ACGGC	2 cut(s)	1547, 2309
BciT130I	CCWGG	7 cut(s)	140, 185, 212, 1611, 1634, 1787, 2235
BclI	TGATCA	2 cut(s)	2515, 2836
BcnI	CCSGG	3 cut(s)	151, 152, 169
BcoDI	GTCTC	6 cut(s)	32, 116, 481, 922, 1651, 1970
BfaI	CTAG	8 cut(s)	107, 447, 1194, 1355, 1841, 2055, 2195, 2370
BfmI	CTRYAG	3 cut(s)	1400, 1596, 2850
BfoI	RGCGCY	1 cut(s)	2835
BfuAI	ACCTGC	1 cut(s)	1497
BglI	GCCNNNNNGGC	1 cut(s)	194
BisI	GCNGC	4 cut(s)	1467, 1669, 1728, 2730
BlnI	CCTAGG	1 cut(s)	106
BlpI	GCTNAGC	2 cut(s)	1482, 1605
BlsI	GCNGC	4 cut(s)	1468, 1670, 1729, 2731
Bme18I	GGWCC	1 cut(s)	133
BmeT110I	CYCGRG	2 cut(s)	150, 917
BmgBI	CACGTC	1 cut(s)	2655
BmgT120I	GGNCC	6 cut(s)	103, 133, 153, 187, 196, 1636
BmiI	GGNNCC	2 cut(s)	1701, 2493
BmrI	ACTGGG	1 cut(s)	2816
BmsI	GCATC	8 cut(s)	1294, 1558, 1881, 2014, 2266, 2276, 2304, 2763
BmtI	GCTAGC	1 cut(s)	1844
BmuI	ACTGGG	1 cut(s)	2816
BpiI	GAAGAC	2 cut(s)	1580, 2470
BpmI	CTGGAG	3 cut(s)	98, 167, 245
Bpu10I	CCTNAGC	3 cut(s)	413, 1437, 1572
Bpu1102I	GCTNAGC	2 cut(s)	1482, 1605
Bpu14I	TTCGAA	1 cut(s)	1361
BpuEI	CTTGAG	3 cut(s)	779, 980, 1013
BpuMI	CCSGG	3 cut(s)	151, 152, 169
BsaAI	YACGTR	1 cut(s)	1545
BsaHI	GRCGYC	1 cut(s)	126
BsaI	GGTCTC	1 cut(s)	116
BsaJI	CCNNGG	4 cut(s)	106, 150, 1786, 2710
BsaWI	WCCGGW	1 cut(s)	1702
Bsc4I	CCNNNNNNNGG	3 cut(s)	121, 150, 310
Bse118I	RCCGGY	1 cut(s)	2309
Bse1I	ACTGG	2 cut(s)	115, 2822
Bse3DI	GCAATG	5 cut(s)	741, 1314, 1461, 2476, 2639
BseBI	CCWGG	7 cut(s)	140, 185, 212, 1611, 1634, 1787, 2235
BseDI	CCNNGG	4 cut(s)	106, 150, 1786, 2710
BseGI	GGATG	4 cut(s)	505, 1117, 1309, 2856
BseLI	CCNNNNNNNGG	3 cut(s)	121, 150, 310
BseMI	GCAATG	5 cut(s)	741, 1314, 1461, 2476, 2639
BseMII	CTCAG	8 cut(s)	33, 404, 899, 1451, 1461, 1491, 1619, 1662
BseNI	ACTGG	2 cut(s)	115, 2822
BseSI	GKGCMC	1 cut(s)	2829
BseXI	GCAGC	3 cut(s)	1478, 1680, 1739
BseYI	CCCAGC	3 cut(s)	1285, 1867, 2458
BsgI	GTGCAG	2 cut(s)	1746, 2063
Bsh1236I	CGCG	2 cut(s)	192, 273
BshNI	GGYRCC	1 cut(s)	2491
BsiHKAI	GWGCWC	3 cut(s)	183, 1901, 2829
BsiHKCI	CYCGRG	2 cut(s)	150, 917
BsiSI	CCGG	5 cut(s)	151, 169, 1703, 2179, 2310
BslI	CCNNNNNNNGG	3 cut(s)	121, 150, 310
BsmAI	GTCTC	6 cut(s)	32, 116, 481, 922, 1651, 1970
BsmBI	CGTCTC	2 cut(s)	32, 481
Bso31I	GGTCTC	1 cut(s)	116
BsoBI	CYCGRG	2 cut(s)	150, 917
Bsp119I	TTCGAA	1 cut(s)	1361
Bsp1286I	GDGCHC	3 cut(s)	183, 1901, 2829
Bsp143I	GATC	6 cut(s)	432, 2006, 2341, 2515, 2524, 2836
Bsp1720I	GCTNAGC	2 cut(s)	1482, 1605
BspACI	CCGC	8 cut(s)	190, 273, 289, 311, 346, 400, 569, 2729
BspCNI	CTCAG	8 cut(s)	32, 405, 898, 1450, 1462, 1492, 1618, 1661
BspFNI	CGCG	2 cut(s)	192, 273
BspHI	TCATGA	2 cut(s)	985, 1950
BspLI	GGNNCC	2 cut(s)	1701, 2493
BspMI	ACCTGC	1 cut(s)	1497
BspOI	GCTAGC	1 cut(s)	1844
BspPI	GGATC	2 cut(s)	440, 2014
BspQI	GCTCTTC	1 cut(s)	318
BspT104I	TTCGAA	1 cut(s)	1361
BspT107I	GGYRCC	1 cut(s)	2491
BspTNI	GGTCTC	1 cut(s)	116
BsrBI	CCGCTC	1 cut(s)	400
BsrDI	GCAATG	5 cut(s)	741, 1314, 1461, 2476, 2639
BsrFI	RCCGGY	1 cut(s)	2309
BsrI	ACTGG	2 cut(s)	115, 2822
BssAI	RCCGGY	1 cut(s)	2309
BssECI	CCNNGG	4 cut(s)	106, 150, 1786, 2710
BssMI	GATC	6 cut(s)	432, 2006, 2341, 2515, 2524, 2836
BssNI	GRCGYC	1 cut(s)	126
BssT1I	CCWWGG	1 cut(s)	106
Bst2UI	CCWGG	7 cut(s)	140, 185, 212, 1611, 1634, 1787, 2235
Bst4CI	ACNGT	4 cut(s)	256, 1339, 1586, 2512
BstACI	GRCGYC	1 cut(s)	126
BstAPI	GCANNNNNTGC	2 cut(s)	1190, 2750
BstBAI	YACGTR	1 cut(s)	1545
BstBI	TTCGAA	1 cut(s)	1361
BstC8I	GCNNGC	6 cut(s)	33, 190, 1202, 1666, 1842, 2037
BstDSI	CCRYGG	1 cut(s)	2710
BstF5I	GGATG	4 cut(s)	505, 1117, 1309, 2856
BstFNI	CGCG	2 cut(s)	192, 273
BstH2I	RGCGCY	1 cut(s)	2835
BstHHI	GCGC	2 cut(s)	273, 2834
BstKTI	GATC	6 cut(s)	435, 2009, 2344, 2518, 2527, 2839
BstMAI	GTCTC	6 cut(s)	32, 116, 481, 922, 1651, 1970
BstMBI	GATC	6 cut(s)	432, 2006, 2341, 2515, 2524, 2836
BstMWI	GCNNNNNNNGC	6 cut(s)	194, 203, 1190, 1724, 2041, 2750
BstNI	CCWGG	7 cut(s)	140, 185, 212, 1611, 1634, 1787, 2235
BstNSI	RCATGY	2 cut(s)	983, 1668
BstSFI	CTRYAG	3 cut(s)	1400, 1596, 2850
BstSLI	GKGCMC	1 cut(s)	2829
BstSNI	TACGTA	1 cut(s)	1545
BstUI	CGCG	2 cut(s)	192, 273
BstV1I	GCAGC	3 cut(s)	1478, 1680, 1739
BstV2I	GAAGAC	2 cut(s)	1580, 2470
BstX2I	RGATCY	1 cut(s)	2006
BstXI	CCANNNNNNTGG	1 cut(s)	2747
BstYI	RGATCY	1 cut(s)	2006
BtgI	CCRYGG	1 cut(s)	2710
BtrI	CACGTC	1 cut(s)	2655
BtsCI	GGATG	4 cut(s)	505, 1117, 1309, 2856
BtsI	GCAGTG	3 cut(s)	2046, 2051, 2622
BtsIMutI	CAGTG	8 cut(s)	122, 1131, 1719, 1979, 2046, 2051, 2622, 2829
BveI	ACCTGC	1 cut(s)	1497
Cac8I	GCNNGC	6 cut(s)	33, 190, 1202, 1666, 1842, 2037
CciI	TCATGA	2 cut(s)	985, 1950
CfoI	GCGC	2 cut(s)	273, 2834
Cfr10I	RCCGGY	1 cut(s)	2309
Cfr13I	GGNCC	6 cut(s)	103, 133, 153, 187, 196, 1636
Cfr9I	CCCGGG	1 cut(s)	150
CsiI	ACCWGGT	1 cut(s)	210
Csp6I	GTAC	5 cut(s)	971, 1826, 2327, 2444, 2630
CviAII	CATG	9 cut(s)	980, 986, 1148, 1561, 1665, 1951, 2345, 2351, 2741
CviQI	GTAC	5 cut(s)	971, 1826, 2327, 2444, 2630
DpnI	GATC	6 cut(s)	434, 2008, 2343, 2517, 2526, 2838
DpnII	GATC	6 cut(s)	432, 2006, 2341, 2515, 2524, 2836
EaeI	YGGCCR	3 cut(s)	141, 1716, 2730
Ecl136II	GAGCTC	2 cut(s)	181, 1899
Eco105I	TACGTA	1 cut(s)	1545
Eco130I	CCWWGG	1 cut(s)	106
Eco24I	GRGCYC	2 cut(s)	183, 1901
Eco31I	GGTCTC	1 cut(s)	116
Eco47I	GGWCC	1 cut(s)	133
Eco47III	AGCGCT	1 cut(s)	2833
Eco53kI	GAGCTC	2 cut(s)	181, 1899
Eco57I	CTGAAG	5 cut(s)	77, 342, 1107, 2489, 2781
Eco88I	CYCGRG	2 cut(s)	150, 917
EcoICRI	GAGCTC	2 cut(s)	181, 1899
EcoO109I	RGGNCCY	1 cut(s)	1636
EcoRII	CCWGG	7 cut(s)	138, 183, 210, 1609, 1632, 1785, 2233
EcoT14I	CCWWGG	1 cut(s)	106
EcoT22I	ATGCAT	3 cut(s)	1666, 2291, 2641
EcoT38I	GRGCYC	2 cut(s)	183, 1901
ErhI	CCWWGG	1 cut(s)	106
Esp3I	CGTCTC	2 cut(s)	32, 481
FaeI	CATG	9 cut(s)	983, 989, 1151, 1564, 1668, 1954, 2348, 2354, 2744
FalI	AAGNNNNNCTT	2 cut(s)	269, 301
FatI	CATG	9 cut(s)	979, 985, 1147, 1560, 1664, 1950, 2344, 2350, 2740
FauI	CCCGC	1 cut(s)	197
FauNDI	CATATG	2 cut(s)	1660, 2119
FbaI	TGATCA	2 cut(s)	2515, 2836
Fnu4HI	GCNGC	4 cut(s)	1467, 1669, 1728, 2730
FokI	GGATG	4 cut(s)	512, 1104, 1316, 2843
FriOI	GRGCYC	2 cut(s)	183, 1901
Fsp4HI	GCNGC	4 cut(s)	1467, 1669, 1728, 2730
FspBI	CTAG	8 cut(s)	107, 447, 1194, 1355, 1841, 2055, 2195, 2370
GlaI	GCGC	2 cut(s)	272, 2833
GluI	GCNGC	4 cut(s)	1467, 1669, 1728, 2730
GsaI	CCCAGC	3 cut(s)	1289, 1871, 2462
GsuI	CTGGAG	3 cut(s)	98, 167, 245
HaeII	RGCGCY	1 cut(s)	2835
HapII	CCGG	5 cut(s)	151, 169, 1703, 2179, 2310
HhaI	GCGC	2 cut(s)	273, 2834
Hin1I	GRCGYC	1 cut(s)	126
Hin1II	CATG	9 cut(s)	983, 989, 1151, 1564, 1668, 1954, 2348, 2354, 2744
Hin6I	GCGC	2 cut(s)	271, 2832
HinP1I	GCGC	2 cut(s)	271, 2832
HincII	GTYRAC	1 cut(s)	2307
HindII	GTYRAC	1 cut(s)	2307
HindIII	AAGCTT	2 cut(s)	87, 1071
HpaI	GTTAAC	1 cut(s)	2307
HpaII	CCGG	5 cut(s)	151, 169, 1703, 2179, 2310
HphI	GGTGA	9 cut(s)	268, 382, 496, 682, 775, 2159, 2182, 2414, 2834
Hpy166II	GTNNAC	4 cut(s)	914, 1342, 2307, 2827
Hpy188III	TCNNGA	8 cut(s)	163, 304, 758, 986, 1951, 2195, 2658, 2808
Hpy8I	GTNNAC	4 cut(s)	914, 1342, 2307, 2827
Hpy99I	CGWCG	1 cut(s)	131
HpyCH4III	ACNGT	4 cut(s)	256, 1339, 1586, 2512
HpyCH4IV	ACGT	3 cut(s)	126, 1544, 2654
HpyF10VI	GCNNNNNNNGC	6 cut(s)	194, 203, 1190, 1724, 2041, 2750
HpySE526I	ACGT	3 cut(s)	126, 1544, 2654
Hsp92I	GRCGYC	1 cut(s)	126
Hsp92II	CATG	9 cut(s)	983, 989, 1151, 1564, 1668, 1954, 2348, 2354, 2744
HspAI	GCGC	2 cut(s)	271, 2832
Ksp22I	TGATCA	2 cut(s)	2515, 2836
KspAI	GTTAAC	1 cut(s)	2307
Kzo9I	GATC	6 cut(s)	432, 2006, 2341, 2515, 2524, 2836
LguI	GCTCTTC	1 cut(s)	318
Lsp1109I	GCAGC	3 cut(s)	1478, 1680, 1739
LweI	GCATC	8 cut(s)	1294, 1558, 1881, 2014, 2266, 2276, 2304, 2763
MabI	ACCWGGT	1 cut(s)	210
MaeI	CTAG	8 cut(s)	107, 447, 1194, 1355, 1841, 2055, 2195, 2370
MaeII	ACGT	3 cut(s)	126, 1544, 2654
MaeIII	GTNAC	6 cut(s)	1063, 1143, 1407, 1537, 1958, 2147
MalI	GATC	6 cut(s)	434, 2008, 2343, 2517, 2526, 2838
MbiI	CCGCTC	1 cut(s)	400
MboI	GATC	6 cut(s)	432, 2006, 2341, 2515, 2524, 2836
MfeI	CAATTG	1 cut(s)	1052
MflI	RGATCY	1 cut(s)	2006
MhlI	GDGCHC	3 cut(s)	183, 1901, 2829
MlsI	TGGCCA	1 cut(s)	1718
MluNI	TGGCCA	1 cut(s)	1718
MlyI	GAGTC	4 cut(s)	236, 2257, 2678, 2700
MmeI	TCCRAC	4 cut(s)	477, 1491, 1863, 2064
Mox20I	TGGCCA	1 cut(s)	1718
Mph1103I	ATGCAT	3 cut(s)	1666, 2291, 2641
MscI	TGGCCA	1 cut(s)	1718
MseI	TTAA	9 cut(s)	77, 462, 561, 687, 1241, 1367, 1431, 2306, 2336
MslI	CAYNNNNRTG	4 cut(s)	984, 1663, 2349, 2745
Msp20I	TGGCCA	1 cut(s)	1718
MspA1I	CMGCKG	2 cut(s)	1469, 2458
MspI	CCGG	5 cut(s)	151, 169, 1703, 2179, 2310
MunI	CAATTG	1 cut(s)	1052
MvaI	CCWGG	7 cut(s)	140, 185, 212, 1611, 1634, 1787, 2235
MvnI	CGCG	2 cut(s)	192, 273
MwoI	GCNNNNNNNGC	6 cut(s)	194, 203, 1190, 1724, 2041, 2750
NciI	CCSGG	3 cut(s)	151, 152, 169
NdeI	CATATG	2 cut(s)	1660, 2119
NdeII	GATC	6 cut(s)	432, 2006, 2341, 2515, 2524, 2836
NheI	GCTAGC	1 cut(s)	1840
NlaIII	CATG	9 cut(s)	983, 989, 1151, 1564, 1668, 1954, 2348, 2354, 2744
NlaIV	GGNNCC	2 cut(s)	1701, 2493
NmuCI	GTSAC	1 cut(s)	2147
NsiI	ATGCAT	3 cut(s)	1666, 2291, 2641
NspI	RCATGY	2 cut(s)	983, 1668
NspV	TTCGAA	1 cut(s)	1361
PaeI	GCATGC	1 cut(s)	1668
PaeR7I	CTCGAG	1 cut(s)	917
PagI	TCATGA	2 cut(s)	985, 1950
PciSI	GCTCTTC	1 cut(s)	318
PcsI	WCGNNNNNNNCGW	1 cut(s)	647
PfeI	GAWTC	6 cut(s)	631, 1058, 1358, 1416, 2069, 2230
PflFI	GACNNNGTC	2 cut(s)	212, 2153
PkrI	GCNGC	4 cut(s)	1468, 1670, 1729, 2731
PleI	GAGTC	4 cut(s)	235, 2256, 2677, 2700
PpsI	GAGTC	4 cut(s)	235, 2256, 2677, 2700
Ppu21I	YACGTR	1 cut(s)	1545
PshBI	ATTAAT	1 cut(s)	1431
Psp124BI	GAGCTC	2 cut(s)	183, 1901
Psp6I	CCWGG	7 cut(s)	138, 183, 210, 1609, 1632, 1785, 2233
PspFI	CCCAGC	3 cut(s)	1285, 1867, 2458
PspGI	CCWGG	7 cut(s)	138, 183, 210, 1609, 1632, 1785, 2233
PspN4I	GGNNCC	2 cut(s)	1701, 2493
PspPI	GGNCC	6 cut(s)	103, 133, 153, 187, 196, 1636
PspXI	VCTCGAGB	1 cut(s)	917
PsrI	GAACNNNNNNTAC	2 cut(s)	2436, 2468
PsuI	RGATCY	1 cut(s)	2006
PsyI	GACNNNGTC	2 cut(s)	212, 2153
PvuII	CAGCTG	2 cut(s)	1469, 2458
RsaI	GTAC	5 cut(s)	972, 1827, 2328, 2445, 2631
RsaNI	GTAC	5 cut(s)	971, 1826, 2327, 2444, 2630
RseI	CAYNNNNRTG	4 cut(s)	984, 1663, 2349, 2745
SacI	GAGCTC	2 cut(s)	183, 1901
SapI	GCTCTTC	1 cut(s)	318
SaqAI	TTAA	9 cut(s)	77, 462, 561, 687, 1241, 1367, 1431, 2306, 2336
SatI	GCNGC	4 cut(s)	1467, 1669, 1728, 2730
Sau3AI	GATC	6 cut(s)	432, 2006, 2341, 2515, 2524, 2836
Sau96I	GGNCC	6 cut(s)	103, 133, 153, 187, 196, 1636
SchI	GAGTC	4 cut(s)	236, 2257, 2678, 2700
SduI	GDGCHC	3 cut(s)	183, 1901, 2829
SexAI	ACCWGGT	1 cut(s)	210
SfaNI	GCATC	8 cut(s)	1294, 1558, 1881, 2014, 2266, 2276, 2304, 2763
SfcI	CTRYAG	3 cut(s)	1400, 1596, 2850
SfiI	GGCCNNNNNGGCC	1 cut(s)	194
Sfr274I	CTCGAG	1 cut(s)	917
SfuI	TTCGAA	1 cut(s)	1361
SinI	GGWCC	1 cut(s)	133
SlaI	CTCGAG	1 cut(s)	917
SmaI	CCCGGG	1 cut(s)	152
SmiMI	CAYNNNNRTG	4 cut(s)	984, 1663, 2349, 2745
SmlI	CTYRAG	4 cut(s)	758, 917, 959, 992
SmoI	CTYRAG	4 cut(s)	758, 917, 959, 992
SnaBI	TACGTA	1 cut(s)	1545
SphI	GCATGC	1 cut(s)	1668
SsiI	CCGC	8 cut(s)	190, 273, 289, 311, 346, 400, 569, 2729
SspMI	CTAG	8 cut(s)	107, 447, 1194, 1355, 1841, 2055, 2195, 2370
SstI	GAGCTC	2 cut(s)	183, 1901
StyI	CCWWGG	1 cut(s)	106
TaaI	ACNGT	4 cut(s)	256, 1339, 1586, 2512
TaiI	ACGT	3 cut(s)	129, 1547, 2657
TaqI	TCGA	8 cut(s)	129, 297, 435, 641, 918, 1361, 1426, 2862
TatI	WGTACW	2 cut(s)	1825, 2443
TauI	GCSGC	1 cut(s)	2732
TfiI	GAWTC	6 cut(s)	631, 1058, 1358, 1416, 2069, 2230
Tru1I	TTAA	9 cut(s)	77, 462, 561, 687, 1241, 1367, 1431, 2306, 2336
Tru9I	TTAA	9 cut(s)	77, 462, 561, 687, 1241, 1367, 1431, 2306, 2336
TscAI	CASTG	8 cut(s)	122, 1131, 1719, 1986, 2046, 2051, 2629, 2829
TseFI	GTSAC	1 cut(s)	2147
TseI	GCWGC	3 cut(s)	1466, 1668, 1727
Tsp45I	GTSAC	1 cut(s)	2147
TspDTI	ATGAA	9 cut(s)	716, 974, 1013, 1106, 1472, 1728, 1967, 2075, 2136
TspGWI	ACGGA	2 cut(s)	2423, 2699
TspMI	CCCGGG	1 cut(s)	150
TspRI	CASTG	8 cut(s)	122, 1131, 1719, 1986, 2046, 2051, 2629, 2829
Tth111I	GACNNNGTC	2 cut(s)	212, 2153
VneI	GTGCAC	1 cut(s)	2825
VpaK11BI	GGWCC	1 cut(s)	133
VspI	ATTAAT	1 cut(s)	1431
XapI	RAATTY	5 cut(s)	818, 1330, 1363, 2376, 2803
XbaI	TCTAGA	1 cut(s)	2194
XceI	RCATGY	2 cut(s)	983, 1668
XhoI	CTCGAG	1 cut(s)	917
XmaI	CCCGGG	1 cut(s)	150
XmaJI	CCTAGG	1 cut(s)	106
XspI	CTAG	8 cut(s)	107, 447, 1194, 1355, 1841, 2055, 2195, 2370
ZraI	GACGTC	1 cut(s)	127
Zsp2I	ATGCAT	3 cut(s)	1666, 2291, 2641

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.