Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0006977

Physical Location & Seq

Genomic Coordinates Reverse (-)

4847589 .. 4851531

Gene Structure 3943 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g08180.t5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGGAAAACCACAAGCACACCAACCCATCCAAGTCAGTAAACGACGCAGTGTACAAGCTCCAACTCGCGCTCCTCGACAGCGTCAAAACCCTAGACCGCCTCTACCTAGCCGGCTCCATAATCTCCCGCTCCGACTACACCGACGTCGTCACGGAGCGATCCATCGCCGACCTCTGCGGCTATCCTCTCTGCTCCAACGCCCTACCTCCCGAAGCCTCCAGAACTCGCAAGGGCCACTACCGCATCTCGCTCAAGGAGCACAAGGTCTACGATCTCAGGGAGACGAAGCTGTACTGCTCATCGAAGTGCGTGATTGACAGCAAGGCGTTTGCTCAGGGGTTGAGCGAGGAGAGATGTGACGTGTTGGATTTGGGAAAGGTTGAGAGGGTTTTGAGGGAGTTTGGGGAGGAGAAGAAGGAGATTGGGGATTTAGGGTTGTCTAGTTTGAAGATTGAAGAGAAGAGTGGGACTTACAGTGGGAAAGTGGAGGAGTTTGGTCCTTCGAATGCGATTGAGGGATATGTGCCGAGAAGGGATAGGGTTTCGAAGGCGTCGGGTGCGAAGAAGAACAAACAAGGGTCGAAAGGGAAAGATGCGAAGCCGAGTGGCGGTGGGAAACAGTTGATTTTGAATGATATGGACTTCATGAGTACATTACTAGCTTGTGATGAATATAGCGTGTCGAAAATGCCACCAAATGTAGCAGATAATAATGTTGATACCGAGTTAAAGAAATCAAAAGGTAAAGACTTAGAGAGCGGATTTAGTGTGTTAGAAACATCGGCCACTCCTAATAAGAGTGAAGGTGTGATGGATGTTGGGGATTTAGGTATGTCTAGGTTGAAGATTGAAGCGGAAGAGGAATCTCAAGTTGGGAAGGGGGAGAAATCGAGTGAGGGTACACTGAGGTCTTCTCTTAAACATTCAGGGACAAAGAAACTTAGTCGCTCTGTTACTTGGGCTGATGAAAAGAGTGATAGTACCGGGAGGAGGAATCTTTGTGAGGTGAGAGATATGGAAGATGGACTAGAAAATCCTGGTGCATTTGACAGTTTGTACAAACCTTCTTCATCAAGTGAAGCTGGTTCCTCTTTTAGTTGGGTTGATAAGACGATTGATAGTACGAAGTGTGAAAATATTTGTGAGGTTAGTGGAACGCATGATGCAAAAGAGGTTCCTGAGGTAGTAGGCAGTTCAGTCGTGCAAGGTAATGAATGGTTTGAGTCAGCAGAAGCCTGTGCAGTAGCATTGAGTGAGGCAGCCGGAGCTGTTGAAACCGGAGAATTTGATACTAGTGATGCTGTGTCAAAAGCCGGAATTATTATACTGCCACGCACAGATGGTGTGGATGAAGAAGAGTTCATAGTGGATGGTGCGGATGAAGAAGATTCCATAGAGGATAGTGTGGATGAAGAAGAGTCTACAGAGGATATTGACATGCTTGAACCAGAACAGGCTCTTTCAAAGTGGCCAAAAAAACCCGAAAGTTCACAGTTTGATTTATTTAATCCTGAGGACTCTTGGTTTGATGCTCCACCAGATGGTTTCAATTTGACATTATCTCCTTTCGCAACAATGTGGAATGCTCTCTTTACATGGACAACATCATCTACGTTGGCTTATATATATGGCAAGGATGATAGTTTCCATGAAGAGTTTCTAAACGTCAATGGGAGAAGTTATCCCCATAAGATTGTGTTGGCAGATGGTCGGTCTTCAGAAATCAAGCTAACTGTGGGTGCATCTCTTTCTCGGGCTCTACCAGAAATTGTTGCTGAACTAGGGCTTGCGGTTCCCAATTTAGAGAAAGGAATGGGCTTCATGTTGAATACAATGTCCTTTATTGAGGCGTTACCAGCATTCAGAATGAAACAGTGGCAAGTGATCGCTCTTCTTTTTATTGAGGGTCTCTCTGTTTGTAGGATGCCGGCACTTACTCCTCACATGACAAATAGAAGGGTACTGATTCAGAGGGTGCTGGATGGTGCCCGTATAAGCGTAGAAGAGTACGAGATCATGAAGGATTTCCTGATACCCCTTGGCCGAGCTCCCCAATTCGCATCCCAGAGTGGCGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006357 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008420 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019219 GO:0019222 GO:0019538 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070940 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RPAP2_Rtr1

Protein Analysis

693

Amino Acids

75.9

Weight (kDa)

4.82

Isoelectric Point (pI)

48.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPAP2_Rtr1	PF04181	40 - 114	3.8e-22	Rtr1/RPAP2 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006977)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G26760 AT5G26760
fragaria_vesca	FvH4_6g08180 FvH4_6g08180 FvH4_6g08180 FvH4_6g08180 FvH4_6g08180 FvH4_6g08180
malus_domestica	MD04G1189300.v1.1 MD12G1202100.v1.1
prunus_persica	Prupe.6G306900_v2.0.a1
pyrus_communis	pycom04g16770 pycom12g18860
rosa_chinensis	RchiOBHm_Chr3g0458051
rosa_laevigata	RLG00000025177
rosa_multiflora	Rmu_sc0000384.1_g000014
rosa_roxburghii	Rroxscaffold_6G00421320
rosa_rugosa	Rorug03G0024600 Rorug03G0024600
rosa_samantha	Rh3AG085100 Rh3BG087900 Rh3CG088400 Rh3DG088800
rosa_wichuraiana	Rw0G012430 Rw3G007250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	147
AccB1I	GGYRCC	1 cut(s)	1985
AccB7I	CCANNNNNTGG	1 cut(s)	1541
AccBSI	CCGCTC	2 cut(s)	129, 759
AccI	GTMKAC	2 cut(s)	267, 1421
AccII	CGCG	1 cut(s)	68
AciI	CCGC	9 cut(s)	97, 127, 177, 241, 609, 759, 854, 1376, 1790
AclWI	GGATC	1 cut(s)	153
AcoI	YGGCCR	3 cut(s)	783, 1469, 2041
AcsI	RAATTY	1 cut(s)	1283
AcuI	CTGAAG	1 cut(s)	1701
AcyI	GRCGYC	2 cut(s)	144, 551
AfaI	GTAC	9 cut(s)	53, 293, 652, 901, 982, 1058, 1123, 1962, 2009
AfiI	CCNNNNNNNGG	3 cut(s)	608, 990, 1541
AflIII	ACRYGT	1 cut(s)	360
AhlI	ACTAGT	1 cut(s)	1292
AjiI	CACGTC	1 cut(s)	361
AjnI	CCWGG	1 cut(s)	1036
AjuI	GAANNNNNNNTTGG	2 cut(s)	855, 887
AluBI	AGCT	7 cut(s)	58, 289, 662, 1082, 1268, 1729, 2048
AluI	AGCT	7 cut(s)	58, 289, 662, 1082, 1268, 1729, 2048
Alw21I	GWGCWC	2 cut(s)	261, 2050
Alw26I	GTCTC	2 cut(s)	275, 1913
AlwI	GGATC	1 cut(s)	153
Ama87I	CYCGRG	1 cut(s)	1752
AoxI	GGCC	4 cut(s)	232, 783, 1469, 2041
ApeKI	GCWGC	1 cut(s)	1259
ApoI	RAATTY	1 cut(s)	1283
ArsI	GACNNNNNNTTYG	2 cut(s)	1508, 1540
Asp700I	GAANNNNTTC	2 cut(s)	1656, 2024
AspLEI	GCGC	2 cut(s)	70, 2075
AspS9I	GGNCC	2 cut(s)	232, 497
AsuC2I	CCSGG	1 cut(s)	985
AsuHPI	GGTGA	1 cut(s)	1018
AsuII	TTCGAA	2 cut(s)	503, 545
AvaI	CYCGRG	1 cut(s)	1752
AvaII	GGWCC	1 cut(s)	497
AxyI	CCTNAGG	2 cut(s)	1179, 1512
BaeGI	GKGCMC	1 cut(s)	1990
BalI	TGGCCA	1 cut(s)	1471
BanI	GGYRCC	1 cut(s)	1985
BanII	GRGCYC	2 cut(s)	1759, 2050
BbsI	GAAGAC	2 cut(s)	903, 1707
Bbv12I	GWGCWC	2 cut(s)	261, 2050
BbvI	GCAGC	1 cut(s)	1271
BccI	CCATC	9 cut(s)	34, 170, 805, 1016, 1334, 1364, 1535, 1700, 1976
BcgI	CGANNNNNNTGC	2 cut(s)	1180, 1214
BciT130I	CCWGG	1 cut(s)	1038
BcnI	CCSGG	1 cut(s)	985
BcoDI	GTCTC	2 cut(s)	275, 1913
BcuI	ACTAGT	1 cut(s)	1292
BfaI	CTAG	8 cut(s)	92, 107, 441, 659, 837, 1028, 1293, 1781
BfmI	CTRYAG	1 cut(s)	1422
BfoI	RGCGCY	1 cut(s)	2076
BisI	GCNGC	2 cut(s)	178, 1260
BlsI	GCNGC	2 cut(s)	179, 1261
Bme1390I	CCNGG	2 cut(s)	985, 1038
Bme18I	GGWCC	1 cut(s)	497
BmeT110I	CYCGRG	1 cut(s)	1752
BmgBI	CACGTC	1 cut(s)	361
BmgT120I	GGNCC	2 cut(s)	232, 497
BmiI	GGNNCC	5 cut(s)	115, 1087, 1176, 1794, 1987
BmrFI	CCNGG	2 cut(s)	985, 1038
BmsI	GCATC	8 cut(s)	252, 583, 1153, 1288, 1519, 1751, 1914, 2069
BpiI	GAAGAC	2 cut(s)	903, 1707
BplI	GAGNNNNNCTC	4 cut(s)	898, 930, 1895, 1927
BpmI	CTGGAG	1 cut(s)	202
Bpu10I	CCTNAGC	1 cut(s)	333
Bpu14I	TTCGAA	2 cut(s)	503, 545
BpuEI	CTTGAG	2 cut(s)	236, 852
BpuMI	CCSGG	1 cut(s)	985
BsaHI	GRCGYC	2 cut(s)	144, 551
BsaI	GGTCTC	1 cut(s)	1913
BsaJI	CCNNGG	1 cut(s)	2038
BsaWI	WCCGGW	1 cut(s)	1277
BsaXI	ACNNNNNCTCC	4 cut(s)	54, 84, 1546, 1576
Bsc4I	CCNNNNNNNGG	3 cut(s)	608, 990, 1541
Bse118I	RCCGGY	2 cut(s)	110, 1927
Bse21I	CCTNAGG	2 cut(s)	1179, 1512
BseBI	CCWGG	1 cut(s)	1038
BseDI	CCNNGG	1 cut(s)	2038
BseLI	CCNNNNNNNGG	3 cut(s)	608, 990, 1541
BseMII	CTCAG	5 cut(s)	289, 347, 896, 1170, 1503
BseRI	GAGGAG	6 cut(s)	62, 362, 422, 503, 1003, 1929
BseSI	GKGCMC	1 cut(s)	1990
BseXI	GCAGC	1 cut(s)	1271
BsgI	GTGCAG	1 cut(s)	1260
Bsh1236I	CGCG	1 cut(s)	68
BshFI	GGCC	4 cut(s)	234, 785, 1471, 2043
BshNI	GGYRCC	1 cut(s)	1985
BsiHKAI	GWGCWC	2 cut(s)	261, 2050
BsiHKCI	CYCGRG	1 cut(s)	1752
BsiSI	CCGG	6 cut(s)	111, 984, 1263, 1278, 1314, 1928
BslFI	GGGAC	2 cut(s)	481, 943
BslI	CCNNNNNNNGG	3 cut(s)	608, 990, 1541
BsmAI	GTCTC	2 cut(s)	275, 1913
BsmBI	CGTCTC	1 cut(s)	275
BsmFI	GGGAC	2 cut(s)	481, 943
BsmI	GAATGC	3 cut(s)	511, 1588, 1859
BsnI	GGCC	4 cut(s)	234, 785, 1471, 2043
Bso31I	GGTCTC	1 cut(s)	1913
BsoBI	CYCGRG	1 cut(s)	1752
Bsp119I	TTCGAA	2 cut(s)	503, 545
Bsp1286I	GDGCHC	4 cut(s)	261, 1759, 1990, 2050
Bsp1407I	TGTACA	2 cut(s)	51, 1056
Bsp143I	GATC	4 cut(s)	158, 271, 1884, 2013
BspACI	CCGC	9 cut(s)	97, 127, 177, 241, 609, 759, 854, 1376, 1790
BspANI	GGCC	4 cut(s)	234, 785, 1471, 2043
BspCNI	CTCAG	5 cut(s)	288, 346, 897, 1171, 1504
BspFNI	CGCG	1 cut(s)	68
BspHI	TCATGA	2 cut(s)	645, 2016
BspLI	GGNNCC	5 cut(s)	115, 1087, 1176, 1794, 1987
BspPI	GGATC	1 cut(s)	153
BspQI	GCTCTTC	1 cut(s)	1896
BspT104I	TTCGAA	2 cut(s)	503, 545
BspT107I	GGYRCC	1 cut(s)	1985
BspTNI	GGTCTC	1 cut(s)	1913
BsrBI	CCGCTC	2 cut(s)	129, 759
BsrFI	RCCGGY	2 cut(s)	110, 1927
BsrGI	TGTACA	2 cut(s)	51, 1056
BssAI	RCCGGY	2 cut(s)	110, 1927
BssECI	CCNNGG	1 cut(s)	2038
BssMI	GATC	4 cut(s)	158, 271, 1884, 2013
BssNI	GRCGYC	2 cut(s)	144, 551
BssT1I	CCWWGG	1 cut(s)	2038
Bst2UI	CCWGG	1 cut(s)	1038
Bst4CI	ACNGT	6 cut(s)	476, 621, 1052, 1494, 1735, 1875
Bst6I	CTCTTC	8 cut(s)	450, 455, 852, 1350, 1410, 1647, 1896, 1998
BstACI	GRCGYC	2 cut(s)	144, 551
BstAUI	TGTACA	2 cut(s)	51, 1056
BstBI	TTCGAA	2 cut(s)	503, 545
BstC8I	GCNNGC	3 cut(s)	112, 1788, 1929
BstDEI	CTNAG	7 cut(s)	275, 333, 751, 905, 941, 1179, 1512
BstFNI	CGCG	1 cut(s)	68
BstH2I	RGCGCY	1 cut(s)	2076
BstHHI	GCGC	2 cut(s)	70, 2075
BstKTI	GATC	4 cut(s)	161, 274, 1887, 2016
BstMAI	GTCTC	2 cut(s)	275, 1913
BstMBI	GATC	4 cut(s)	158, 271, 1884, 2013
BstMWI	GCNNNNNNNGC	5 cut(s)	240, 256, 557, 1265, 1856
BstNI	CCWGG	1 cut(s)	1038
BstNSI	RCATGY	1 cut(s)	1441
BstSCI	CCNGG	2 cut(s)	983, 1036
BstSFI	CTRYAG	1 cut(s)	1422
BstSLI	GKGCMC	1 cut(s)	1990
BstUI	CGCG	1 cut(s)	68
BstV1I	GCAGC	1 cut(s)	1271
BstV2I	GAAGAC	2 cut(s)	903, 1707
Bsu36I	CCTNAGG	2 cut(s)	1179, 1512
BsuRI	GGCC	4 cut(s)	234, 785, 1471, 2043
BtgZI	GCGATG	1 cut(s)	148
BtrI	CACGTC	1 cut(s)	361
BtsI	GCAGTG	1 cut(s)	54
BtsIMutI	CAGTG	4 cut(s)	54, 481, 902, 1880
Cac8I	GCNNGC	3 cut(s)	112, 1788, 1929
CciI	TCATGA	2 cut(s)	645, 2016
CfoI	GCGC	2 cut(s)	70, 2075
Cfr10I	RCCGGY	2 cut(s)	110, 1927
Cfr13I	GGNCC	2 cut(s)	232, 497
CseI	GACGC	3 cut(s)	53, 70, 540
Csp6I	GTAC	9 cut(s)	52, 292, 651, 900, 981, 1057, 1122, 1961, 2008
CviAII	CATG	8 cut(s)	646, 1160, 1438, 1596, 1649, 1822, 1945, 2017
CviQI	GTAC	9 cut(s)	52, 292, 651, 900, 981, 1057, 1122, 1961, 2008
DdeI	CTNAG	7 cut(s)	275, 333, 751, 905, 941, 1179, 1512
DpnI	GATC	4 cut(s)	160, 273, 1886, 2015
DpnII	GATC	4 cut(s)	158, 271, 1884, 2013
EaeI	YGGCCR	3 cut(s)	783, 1469, 2041
Eam1104I	CTCTTC	8 cut(s)	450, 455, 852, 1350, 1410, 1647, 1896, 1998
EarI	CTCTTC	8 cut(s)	450, 455, 852, 1350, 1410, 1647, 1896, 1998
Ecl136II	GAGCTC	1 cut(s)	2048
Eco130I	CCWWGG	1 cut(s)	2038
Eco24I	GRGCYC	2 cut(s)	1759, 2050
Eco31I	GGTCTC	1 cut(s)	1913
Eco47I	GGWCC	1 cut(s)	497
Eco53kI	GAGCTC	1 cut(s)	2048
Eco57I	CTGAAG	1 cut(s)	1701
Eco81I	CCTNAGG	2 cut(s)	1179, 1512
Eco88I	CYCGRG	1 cut(s)	1752
EcoICRI	GAGCTC	1 cut(s)	2048
EcoRII	CCWGG	1 cut(s)	1036
EcoT14I	CCWWGG	1 cut(s)	2038
EcoT38I	GRGCYC	2 cut(s)	1759, 2050
ErhI	CCWWGG	1 cut(s)	2038
Esp3I	CGTCTC	1 cut(s)	275
FaeI	CATG	8 cut(s)	649, 1163, 1441, 1599, 1652, 1825, 1948, 2020
FaqI	GGGAC	2 cut(s)	481, 943
FatI	CATG	8 cut(s)	645, 1159, 1437, 1595, 1648, 1821, 1944, 2016
FauI	CCCGC	1 cut(s)	134
FblI	GTMKAC	2 cut(s)	267, 1421
Fnu4HI	GCNGC	2 cut(s)	178, 1260
FriOI	GRGCYC	2 cut(s)	1759, 2050
Fsp4HI	GCNGC	2 cut(s)	178, 1260
FspBI	CTAG	8 cut(s)	92, 107, 441, 659, 837, 1028, 1293, 1781
GlaI	GCGC	2 cut(s)	69, 2074
GluI	GCNGC	2 cut(s)	178, 1260
GsuI	CTGGAG	1 cut(s)	202
HaeII	RGCGCY	1 cut(s)	2076
HaeIII	GGCC	4 cut(s)	234, 785, 1471, 2043
HapII	CCGG	6 cut(s)	111, 984, 1263, 1278, 1314, 1928
HgaI	GACGC	3 cut(s)	53, 70, 540
HhaI	GCGC	2 cut(s)	70, 2075
Hin1I	GRCGYC	2 cut(s)	144, 551
Hin1II	CATG	8 cut(s)	649, 1163, 1441, 1599, 1652, 1825, 1948, 2020
Hin6I	GCGC	2 cut(s)	68, 2073
HinP1I	GCGC	2 cut(s)	68, 2073
HinfI	GANTC	7 cut(s)	863, 994, 1223, 1388, 1418, 1517, 1966
HpaII	CCGG	6 cut(s)	111, 984, 1263, 1278, 1314, 1928
HphI	GGTGA	1 cut(s)	1018
Hpy166II	GTNNAC	6 cut(s)	40, 52, 268, 902, 1422, 1490
Hpy188I	TCNGA	4 cut(s)	133, 1720, 1865, 1971
Hpy188III	TCNNGA	7 cut(s)	209, 219, 646, 1178, 1511, 2017, 2029
Hpy8I	GTNNAC	6 cut(s)	40, 52, 268, 902, 1422, 1490
Hpy99I	CGWCG	4 cut(s)	47, 146, 149, 556
HpyAV	CCTTC	9 cut(s)	409, 510, 525, 541, 797, 871, 1074, 1950, 2014
HpyCH4III	ACNGT	6 cut(s)	476, 621, 1052, 1494, 1735, 1875
HpyCH4IV	ACGT	4 cut(s)	144, 360, 1613, 1665
HpyCH4V	TGCA	5 cut(s)	1043, 1166, 1204, 1241, 1742
HpyF10VI	GCNNNNNNNGC	5 cut(s)	240, 256, 557, 1265, 1856
HpyF3I	CTNAG	7 cut(s)	275, 333, 751, 905, 941, 1179, 1512
HpySE526I	ACGT	4 cut(s)	144, 360, 1613, 1665
Hsp92I	GRCGYC	2 cut(s)	144, 551
Hsp92II	CATG	8 cut(s)	649, 1163, 1441, 1599, 1652, 1825, 1948, 2020
HspAI	GCGC	2 cut(s)	68, 2073
KroI	GCCGGC	2 cut(s)	110, 1927
KroNI	GCCGGC	2 cut(s)	112, 1929
Kzo9I	GATC	4 cut(s)	158, 271, 1884, 2013
LguI	GCTCTTC	1 cut(s)	1896
Lsp1109I	GCAGC	1 cut(s)	1271
LweI	GCATC	8 cut(s)	252, 583, 1153, 1288, 1519, 1751, 1914, 2069
MaeI	CTAG	8 cut(s)	92, 107, 441, 659, 837, 1028, 1293, 1781
MaeII	ACGT	4 cut(s)	144, 360, 1613, 1665
MaeIII	GTNAC	4 cut(s)	148, 356, 952, 1851
MalI	GATC	4 cut(s)	160, 273, 1886, 2015
MbiI	CCGCTC	2 cut(s)	129, 759
MboI	GATC	4 cut(s)	158, 271, 1884, 2013
MhlI	GDGCHC	4 cut(s)	261, 1759, 1990, 2050
MlsI	TGGCCA	1 cut(s)	1471
MluCI	AATT	6 cut(s)	1283, 1317, 1549, 1767, 1798, 2054
MluNI	TGGCCA	1 cut(s)	1471
MlyI	GAGTC	3 cut(s)	1232, 1427, 1511
MmeI	TCCRAC	4 cut(s)	85, 156, 219, 345
Mox20I	TGGCCA	1 cut(s)	1471
MroNI	GCCGGC	2 cut(s)	110, 1927
MroXI	GAANNNNTTC	2 cut(s)	1656, 2024
MscI	TGGCCA	1 cut(s)	1471
MseI	TTAA	4 cut(s)	728, 918, 1506, 2077
MslI	CAYNNNNRTG	1 cut(s)	304
Msp20I	TGGCCA	1 cut(s)	1471
MspI	CCGG	6 cut(s)	111, 984, 1263, 1278, 1314, 1928
MspR9I	CCNGG	2 cut(s)	985, 1038
Mva1269I	GAATGC	3 cut(s)	511, 1588, 1859
MvaI	CCWGG	1 cut(s)	1038
MvnI	CGCG	1 cut(s)	68
MwoI	GCNNNNNNNGC	5 cut(s)	240, 256, 557, 1265, 1856
NaeI	GCCGGC	2 cut(s)	112, 1929
NciI	CCSGG	1 cut(s)	985
NdeII	GATC	4 cut(s)	158, 271, 1884, 2013
NgoMIV	GCCGGC	2 cut(s)	110, 1927
NlaIII	CATG	8 cut(s)	649, 1163, 1441, 1599, 1652, 1825, 1948, 2020
NlaIV	GGNNCC	5 cut(s)	115, 1087, 1176, 1794, 1987
NmeAIII	GCCGAG	3 cut(s)	552, 627, 2069
NmuCI	GTSAC	2 cut(s)	148, 356
NspI	RCATGY	1 cut(s)	1441
NspV	TTCGAA	2 cut(s)	503, 545
PagI	TCATGA	2 cut(s)	645, 2016
PciSI	GCTCTTC	1 cut(s)	1896
PcsI	WCGNNNNNNNCGW	1 cut(s)	72
PctI	GAATGC	3 cut(s)	511, 1588, 1859
PdiI	GCCGGC	2 cut(s)	112, 1929
PdmI	GAANNNNTTC	2 cut(s)	1656, 2024
PfeI	GAWTC	4 cut(s)	863, 994, 1388, 1966
PflFI	GACNNNGTC	2 cut(s)	80, 146
PflMI	CCANNNNNTGG	1 cut(s)	1541
PkrI	GCNGC	2 cut(s)	179, 1261
PleI	GAGTC	3 cut(s)	1231, 1426, 1511
PpsI	GAGTC	3 cut(s)	1231, 1426, 1511
Psp124BI	GAGCTC	1 cut(s)	2050
Psp6I	CCWGG	1 cut(s)	1036
PspGI	CCWGG	1 cut(s)	1036
PspN4I	GGNNCC	5 cut(s)	115, 1087, 1176, 1794, 1987
PspPI	GGNCC	2 cut(s)	232, 497
PsyI	GACNNNGTC	2 cut(s)	80, 146
RsaI	GTAC	9 cut(s)	53, 293, 652, 901, 982, 1058, 1123, 1962, 2009
RsaNI	GTAC	9 cut(s)	52, 292, 651, 900, 981, 1057, 1122, 1961, 2008
RseI	CAYNNNNRTG	1 cut(s)	304
SacI	GAGCTC	1 cut(s)	2050
SapI	GCTCTTC	1 cut(s)	1896
SaqAI	TTAA	4 cut(s)	728, 918, 1506, 2077
SatI	GCNGC	2 cut(s)	178, 1260
Sau3AI	GATC	4 cut(s)	158, 271, 1884, 2013
Sau96I	GGNCC	2 cut(s)	232, 497
SchI	GAGTC	3 cut(s)	1232, 1427, 1511
ScrFI	CCNGG	2 cut(s)	985, 1038
SduI	GDGCHC	4 cut(s)	261, 1759, 1990, 2050
SfaNI	GCATC	8 cut(s)	252, 583, 1153, 1288, 1519, 1751, 1914, 2069
SfcI	CTRYAG	1 cut(s)	1422
SfuI	TTCGAA	2 cut(s)	503, 545
SinI	GGWCC	1 cut(s)	497
SmiMI	CAYNNNNRTG	1 cut(s)	304
SmlI	CTYRAG	2 cut(s)	251, 867
SmoI	CTYRAG	2 cut(s)	251, 867
SpeI	ACTAGT	1 cut(s)	1292
Sse9I	AATT	6 cut(s)	1283, 1317, 1549, 1767, 1798, 2054
SsiI	CCGC	9 cut(s)	97, 127, 177, 241, 609, 759, 854, 1376, 1790
SspI	AATATT	1 cut(s)	1138
SspMI	CTAG	8 cut(s)	92, 107, 441, 659, 837, 1028, 1293, 1781
SstI	GAGCTC	1 cut(s)	2050
StyD4I	CCNGG	2 cut(s)	983, 1036
StyI	CCWWGG	1 cut(s)	2038
TaaI	ACNGT	6 cut(s)	476, 621, 1052, 1494, 1735, 1875
TaiI	ACGT	4 cut(s)	147, 363, 1616, 1668
TaqI	TCGA	7 cut(s)	75, 302, 503, 545, 581, 683, 890
TaqII	GACCGA	1 cut(s)	1701
TasI	AATT	6 cut(s)	1283, 1317, 1549, 1767, 1798, 2054
TatI	WGTACW	4 cut(s)	51, 291, 650, 1056
TauI	GCSGC	1 cut(s)	180
TfiI	GAWTC	4 cut(s)	863, 994, 1388, 1966
Tru1I	TTAA	4 cut(s)	728, 918, 1506, 2077
Tru9I	TTAA	4 cut(s)	728, 918, 1506, 2077
TscAI	CASTG	4 cut(s)	54, 481, 909, 1880
TseFI	GTSAC	2 cut(s)	148, 356
TseI	GCWGC	1 cut(s)	1259
Tsp45I	GTSAC	2 cut(s)	148, 356
TspGWI	ACGGA	1 cut(s)	167
TspRI	CASTG	4 cut(s)	54, 481, 909, 1880
Tth111I	GACNNNGTC	2 cut(s)	80, 146
Van91I	CCANNNNNTGG	1 cut(s)	1541
VpaK11BI	GGWCC	1 cut(s)	497
XapI	RAATTY	1 cut(s)	1283
XceI	RCATGY	1 cut(s)	1441
XmiI	GTMKAC	2 cut(s)	267, 1421
XmnI	GAANNNNTTC	2 cut(s)	1656, 2024
XspI	CTAG	8 cut(s)	92, 107, 441, 659, 837, 1028, 1293, 1781
ZraI	GACGTC	1 cut(s)	145

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.