Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0006977

Physical Location & Seq

Genomic Coordinates Forward (+)

27679841 .. 27683606

Gene Structure 3766 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G306900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2136 bp

ATGGGAAAGGGCCAACCAGAGCAACAGCAACCACGGATTTCAGTGAAAGACACAGTGTACAAGCTACAACTCGCTCTCCTCGAAGGCATCAAGACCCAAGACCACCTTTACTTGGCTGGCTCTATTATCTCTCGCTCCGACTACAATGACGTCGTCACAGAGCGCACCATAGCCAACCTCTGTGGCTACCCTCTCTGCTCCAATGCCTTGCCTTCCGACTCTTCTCGTCCCCACAAGGGTCACTATCGCATTTCGCTCAAGGAGCACAAGGTCTACGACCTCCACGAGACCTACATGTATTGCTCCTCACGCTGTGTTATCGAAAGCAAGGCTTTTGCTCAGAGTTTGGGCGAGGAGAGGTGCGATGTCTTGGATTTTGGAAAGGTTGAAAGGATCTTGAGGGCTTTTGGGGATGTAGGTTTTGATAAAGGTGAAGTGGGTTTCGGGGAGATTGGGGATTTGGGGATTTCTAAGTTGAAGATTGAAGAGAAGGTTGAAACGGGTATTGGGGACTTGGGGATTTCTAGGTTGAAGATTGAAGAAAAGAGTGAAACACATATAGGGGATTTGGGCGCCGTTGGTCCATCTAATGCTATTGAAGGCTATGTTCCACAGAAAGAGAGGATATCCAAGCCATTGGGTTCCAAAAAGAACAAAGAAGGGTCCAAAGGTAAAGATGCGAAGATGAGCAGTGGGATGGATATAATTTTTAATGAGATGGATTTCATGAGTACTATAATCACTAGTGATGAATATAGTGTGTCAAAAATCCCGCCAAGTGTGGGGGAGCCTGATTTTGAAACCAAGTTTAAAAAATCAAAAGGAAAAGTTGGTCTTAACAAGAATGATTCTGTAAAGAAATCCAGACAATCAAAAGGGGGGAAAAATAAGAATGTCAAGAAAGATGATGTTTGCATTCGAGAGGTGCCTTCGACCTCAGATGCTTCACAAACTGTTTTGAATGGAAGCACTAAAGAAGAAAAAGAGGAGTTCATTGTTGAAAAGGCTGAGCAATCAGGTGAGGCCTTGCTAAGATCCTCTCTTAAACCTTCAGGGACAAAGAAACTTAATCGTTCTGTTACTTGGGCTGACGAGATGATTGATAGCACTGGGAGCAGAAACCTTTATGAGGTGAGAGAGATGGAACAGATAATGGAATACTCTGATGCATTTAGCAGTATGCACAAGCCTTCAGTGGAAAATAAAGTTGGTTGCTCTAATACCTGGTTTGATGAGAAGATTGATAGCACGAAGAGTAAAAATATTTGCGAGGTTAGAGAAGTGCAAGATGCTGATGTTTTAGGGAGTTTGGACTTGCAAGAAAATGAGATTTTGGAATCAGCAGAAGCCTGTGCCATGGCATTGAACCAGGCAGCAGAAGCTGTTGCATCTGGAGAATCTGATGTCAGTGGTGCTGTTTCGGGAGCTGGAATTATTATATTGCCACGTCCAGATGGTTTGGATGAAGAAGAGCCTACTGAGGATGTTGATATGCTTGAATCAGAACAAGCTCCTCTGTGGCCAAGAAAGCCTGGAATTCCATGTTCTGATTTGTTTGACCCTGAGGATTCATGGTTTGATGCTCCACCAGAGGGTTTCAGCGTAACCTTATCACCTTTTGCAACAATGTGGAATTCACTCTTTACATGGATAACATCTTCTACATTAGCGTATATATACGGGAGGGATGAAAGTTTTCATGAAGAATTTCTCTCAGTTAATGGGAGAGAATATCCTCCTAAGATTGTCTTGGCTGGTGGTCGCTCTTCTGAAATCAAGAAAACTCTGGACGAATCTTTTGCTCGGGCTCTACCAGGAGTTGTTTCCGAACTCAGGCTTCCAACACCAATATCTAGTTTAGAGCAAGGAATGGGCCGCATGTTGAATACAATGTCCTTTATTGATGCGATACCAGCATTCAGAATGAAACAGTGGCAAGTGATTGTTCTTCTTTTCCTCGAGGGTCTCTCTGTTTGTAGGATCCCTGCACTCACTCCTCACATGACAAATAGAAGGATGCTGTTTTACAAGGTGCTGGAGAACACCCAGATAAGTGCAGAACAGTACGAGCTTATGAAGGATCTCATAATACCCCTTGGCCGAGCACCCCAATTCTCAGCTCAGAGTGGTGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006357 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008420 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019219 GO:0019222 GO:0019538 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070940 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RPAP2_Rtr1

Protein Analysis

712

Amino Acids

78.62

Weight (kDa)

5.09

Isoelectric Point (pI)

45.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006977)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G26760 AT5G26760
fragaria_vesca	FvH4_6g08180 FvH4_6g08180 FvH4_6g08180 FvH4_6g08180 FvH4_6g08180 FvH4_6g08180
malus_domestica	MD04G1189300.v1.1 MD12G1202100.v1.1
prunus_persica	Prupe.6G306900_v2.0.a1
pyrus_communis	pycom04g16770 pycom12g18860
rosa_chinensis	RchiOBHm_Chr3g0458051
rosa_laevigata	RLG00000025177
rosa_multiflora	Rmu_sc0000384.1_g000014
rosa_roxburghii	Rroxscaffold_6G00421320
rosa_rugosa	Rorug03G0024600 Rorug03G0024600
rosa_samantha	Rh3AG085100 Rh3BG087900 Rh3CG088400 Rh3DG088800
rosa_wichuraiana	Rw0G012430 Rw3G007250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	153
AbsI	CCTCGAGG	1 cut(s)	1958
AccB1I	GGYRCC	3 cut(s)	572, 925, 2129
AccI	GTMKAC	1 cut(s)	273
AciI	CCGC	2 cut(s)	773, 1876
AclWI	GGATC	5 cut(s)	401, 1029, 1975, 1988, 2088
AcoI	YGGCCR	2 cut(s)	1520, 2098
AcsI	RAATTY	3 cut(s)	1536, 1633, 1706
AcuI	CTGAAG	2 cut(s)	1035, 1176
AcyI	GRCGYC	2 cut(s)	150, 573
AdeI	CACNNNGTG	1 cut(s)	314
AfaI	GTAC	3 cut(s)	59, 733, 2066
AfiI	CCNNNNNNNGG	6 cut(s)	112, 236, 782, 1129, 1592, 1833
AflIII	ACRYGT	1 cut(s)	294
AhlI	ACTAGT	1 cut(s)	743
AjiI	CACGTC	1 cut(s)	1448
AjnI	CCWGG	4 cut(s)	1223, 1368, 1531, 1813
AjuI	GAANNNNNNNTTGG	4 cut(s)	489, 521, 1191, 1223
AluBI	AGCT	6 cut(s)	64, 1382, 1427, 1511, 2071, 2120
AluI	AGCT	6 cut(s)	64, 1382, 1427, 1511, 2071, 2120
Alw21I	GWGCWC	2 cut(s)	267, 2107
Alw26I	GTCTC	2 cut(s)	281, 1970
AlwI	GGATC	5 cut(s)	401, 1029, 1975, 1988, 2088
AlwNI	CAGNNNCTG	1 cut(s)	1382
Ama87I	CYCGRG	2 cut(s)	1803, 1958
AoxI	GGCC	5 cut(s)	10, 1023, 1520, 1873, 2098
ApeKI	GCWGC	1 cut(s)	1373
ApoI	RAATTY	3 cut(s)	1536, 1633, 1706
ArsI	GACNNNNNNTTYG	2 cut(s)	1781, 1813
Asp700I	GAANNNNTTC	2 cut(s)	1695, 1707
AspLEI	GCGC	2 cut(s)	165, 575
AspS9I	GGNCC	4 cut(s)	10, 581, 663, 1873
AsuHPI	GGTGA	4 cut(s)	443, 1031, 1144, 1605
AvaI	CYCGRG	2 cut(s)	1803, 1958
AvaII	GGWCC	2 cut(s)	581, 663
AxyI	CCTNAGG	1 cut(s)	1563
BalI	TGGCCA	1 cut(s)	1522
BamHI	GGATCC	1 cut(s)	1980
BanI	GGYRCC	3 cut(s)	572, 925, 2129
BanII	GRGCYC	1 cut(s)	1810
BauI	CACGAG	1 cut(s)	284
Bbv12I	GWGCWC	2 cut(s)	267, 2107
BbvI	GCAGC	1 cut(s)	1385
BccI	CCATC	5 cut(s)	592, 691, 712, 1135, 1448
BceAI	ACGGC	1 cut(s)	560
BcgI	CGANNNNNNTGC	2 cut(s)	1781, 1815
BciT130I	CCWGG	4 cut(s)	1225, 1370, 1533, 1815
BcoDI	GTCTC	2 cut(s)	281, 1970
BcuI	ACTAGT	1 cut(s)	743
BfaI	CTAG	3 cut(s)	525, 744, 1854
BfoI	RGCGCY	1 cut(s)	576
BisI	GCNGC	2 cut(s)	1374, 1876
BlpI	GCTNAGC	1 cut(s)	1008
BlsI	GCNGC	2 cut(s)	1375, 1877
BmcAI	AGTACT	1 cut(s)	733
Bme1390I	CCNGG	4 cut(s)	1225, 1370, 1533, 1815
Bme18I	GGWCC	2 cut(s)	581, 663
BmeT110I	CYCGRG	2 cut(s)	1803, 1958
BmgBI	CACGTC	1 cut(s)	1448
BmgT120I	GGNCC	4 cut(s)	10, 581, 663, 1873
BmiI	GGNNCC	7 cut(s)	574, 643, 664, 789, 927, 1982, 2131
BmrFI	CCNGG	4 cut(s)	1225, 1370, 1533, 1815
BmrI	ACTGGG	1 cut(s)	1119
BmsI	GCATC	9 cut(s)	96, 667, 931, 1156, 1279, 1397, 1570, 1894, 2007
BmuI	ACTGGG	1 cut(s)	1119
BplI	GAGNNNNNCTC	2 cut(s)	1952, 1984
BpmI	CTGGAG	2 cut(s)	1413, 2057
Bpu1102I	GCTNAGC	1 cut(s)	1008
BpuEI	CTTGAG	2 cut(s)	242, 418
BsaHI	GRCGYC	2 cut(s)	150, 573
BsaI	GGTCTC	2 cut(s)	281, 1970
BsaJI	CCNNGG	3 cut(s)	32, 1356, 2095
BsaXI	ACNNNNNCTCC	2 cut(s)	60, 90
Bsc4I	CCNNNNNNNGG	6 cut(s)	112, 236, 782, 1129, 1592, 1833
Bse1I	ACTGG	1 cut(s)	1114
Bse21I	CCTNAGG	1 cut(s)	1563
BseBI	CCWGG	4 cut(s)	1225, 1370, 1533, 1815
BseDI	CCNNGG	3 cut(s)	32, 1356, 2095
BseGI	GGATG	6 cut(s)	418, 702, 1468, 1489, 1693, 2022
BseLI	CCNNNNNNNGG	6 cut(s)	112, 236, 782, 1129, 1592, 1833
BseMII	CTCAG	9 cut(s)	353, 951, 999, 1470, 1554, 1728, 1846, 2130, 2135
BseNI	ACTGG	1 cut(s)	1114
BseRI	GAGGAG	6 cut(s)	68, 295, 368, 1001, 1503, 1986
BseXI	GCAGC	1 cut(s)	1385
BsgI	GTGCAG	2 cut(s)	1971, 2076
BshFI	GGCC	5 cut(s)	12, 1025, 1522, 1875, 2100
BshNI	GGYRCC	3 cut(s)	572, 925, 2129
BsiHKAI	GWGCWC	2 cut(s)	267, 2107
BsiHKCI	CYCGRG	2 cut(s)	1803, 1958
BslFI	GGGAC	3 cut(s)	213, 524, 1069
BslI	CCNNNNNNNGG	6 cut(s)	112, 236, 782, 1129, 1592, 1833
BsmAI	GTCTC	2 cut(s)	281, 1970
BsmFI	GGGAC	3 cut(s)	213, 524, 1069
BsmI	GAATGC	2 cut(s)	915, 1916
BsnI	GGCC	5 cut(s)	12, 1025, 1522, 1875, 2100
Bso31I	GGTCTC	2 cut(s)	281, 1970
BsoBI	CYCGRG	2 cut(s)	1803, 1958
Bsp1286I	GDGCHC	3 cut(s)	267, 1810, 2107
Bsp1407I	TGTACA	1 cut(s)	57
Bsp143I	GATC	4 cut(s)	393, 1034, 1980, 2080
Bsp1720I	GCTNAGC	1 cut(s)	1008
Bsp19I	CCATGG	1 cut(s)	1356
BspACI	CCGC	2 cut(s)	773, 1876
BspANI	GGCC	5 cut(s)	12, 1025, 1522, 1875, 2100
BspCNI	CTCAG	9 cut(s)	352, 950, 1000, 1471, 1555, 1727, 1845, 2129, 2134
BspHI	TCATGA	2 cut(s)	726, 1699
BspLI	GGNNCC	7 cut(s)	574, 643, 664, 789, 927, 1982, 2131
BspPI	GGATC	5 cut(s)	401, 1029, 1975, 1988, 2088
BspQI	GCTCTTC	2 cut(s)	1464, 1771
BspT107I	GGYRCC	3 cut(s)	572, 925, 2129
BspTNI	GGTCTC	2 cut(s)	281, 1970
BsrGI	TGTACA	1 cut(s)	57
BsrI	ACTGG	1 cut(s)	1114
BssECI	CCNNGG	3 cut(s)	32, 1356, 2095
BssMI	GATC	4 cut(s)	393, 1034, 1980, 2080
BssNI	GRCGYC	2 cut(s)	150, 573
BssSI	CACGAG	1 cut(s)	284
BssT1I	CCWWGG	2 cut(s)	1356, 2095
Bst2BI	CACGAG	1 cut(s)	284
Bst2UI	CCWGG	4 cut(s)	1225, 1370, 1533, 1815
Bst4CI	ACNGT	4 cut(s)	55, 955, 1932, 2064
Bst6I	CTCTTC	5 cut(s)	226, 480, 1247, 1464, 1771
BstACI	GRCGYC	2 cut(s)	150, 573
BstAUI	TGTACA	1 cut(s)	57
BstC8I	GCNNGC	1 cut(s)	118
BstDSI	CCRYGG	2 cut(s)	32, 1356
BstENI	CCTNNNNNAGG	1 cut(s)	1127
BstF5I	GGATG	6 cut(s)	418, 702, 1468, 1489, 1693, 2022
BstH2I	RGCGCY	1 cut(s)	576
BstHHI	GCGC	2 cut(s)	165, 575
BstKTI	GATC	4 cut(s)	396, 1037, 1983, 2083
BstMAI	GTCTC	2 cut(s)	281, 1970
BstMBI	GATC	4 cut(s)	393, 1034, 1980, 2080
BstMWI	GCNNNNNNNGC	6 cut(s)	262, 309, 1113, 1379, 1528, 1913
BstNI	CCWGG	4 cut(s)	1225, 1370, 1533, 1815
BstNSI	RCATGY	2 cut(s)	298, 1882
BstSCI	CCNGG	4 cut(s)	1223, 1368, 1531, 1813
BstV1I	GCAGC	1 cut(s)	1385
BstX2I	RGATCY	4 cut(s)	393, 1034, 1980, 2080
BstXI	CCANNNNNNTGG	1 cut(s)	637
BstYI	RGATCY	4 cut(s)	393, 1034, 1980, 2080
Bsu36I	CCTNAGG	1 cut(s)	1563
BsuRI	GGCC	5 cut(s)	12, 1025, 1522, 1875, 2100
BtgI	CCRYGG	2 cut(s)	32, 1356
BtgZI	GCGATG	1 cut(s)	378
BtrI	CACGTC	1 cut(s)	1448
BtsCI	GGATG	6 cut(s)	418, 702, 1468, 1489, 1693, 2022
BtsI	GCAGTG	1 cut(s)	697
BtsIMutI	CAGTG	7 cut(s)	48, 60, 697, 1107, 1200, 1414, 1937
Cac8I	GCNNGC	1 cut(s)	118
CaiI	CAGNNNCTG	1 cut(s)	1382
CciI	TCATGA	2 cut(s)	726, 1699
CfoI	GCGC	2 cut(s)	165, 575
Cfr13I	GGNCC	4 cut(s)	10, 581, 663, 1873
CsiI	ACCWGGT	1 cut(s)	1223
Csp6I	GTAC	3 cut(s)	58, 732, 2065
CspCI	CAANNNNNGTGG	2 cut(s)	163, 198
CviAII	CATG	9 cut(s)	295, 727, 1357, 1542, 1572, 1647, 1700, 1879, 2002
CviQI	GTAC	3 cut(s)	58, 732, 2065
DinI	GGCGCC	1 cut(s)	574
DpnI	GATC	4 cut(s)	395, 1036, 1982, 2082
DpnII	GATC	4 cut(s)	393, 1034, 1980, 2080
DraI	TTTAAA	1 cut(s)	811
DraIII	CACNNNGTG	1 cut(s)	314
EaeI	YGGCCR	2 cut(s)	1520, 2098
Eam1104I	CTCTTC	5 cut(s)	226, 480, 1247, 1464, 1771
EarI	CTCTTC	5 cut(s)	226, 480, 1247, 1464, 1771
Eco130I	CCWWGG	2 cut(s)	1356, 2095
Eco147I	AGGCCT	1 cut(s)	1025
Eco24I	GRGCYC	1 cut(s)	1810
Eco31I	GGTCTC	2 cut(s)	281, 1970
Eco32I	GATATC	1 cut(s)	627
Eco47I	GGWCC	2 cut(s)	581, 663
Eco57I	CTGAAG	2 cut(s)	1035, 1176
Eco81I	CCTNAGG	1 cut(s)	1563
Eco88I	CYCGRG	2 cut(s)	1803, 1958
EcoNI	CCTNNNNNAGG	1 cut(s)	1127
EcoRI	GAATTC	2 cut(s)	1536, 1633
EcoRII	CCWGG	4 cut(s)	1223, 1368, 1531, 1813
EcoRV	GATATC	1 cut(s)	627
EcoT14I	CCWWGG	2 cut(s)	1356, 2095
EcoT22I	ATGCAT	1 cut(s)	1171
EcoT38I	GRGCYC	1 cut(s)	1810
EgeI	GGCGCC	1 cut(s)	574
EheI	GGCGCC	1 cut(s)	574
ErhI	CCWWGG	2 cut(s)	1356, 2095
FaeI	CATG	9 cut(s)	298, 730, 1360, 1545, 1575, 1650, 1703, 1882, 2005
FalI	AAGNNNNNCTT	8 cut(s)	90, 122, 316, 348, 819, 851, 1733, 1765
FaqI	GGGAC	3 cut(s)	213, 524, 1069
FatI	CATG	9 cut(s)	294, 726, 1356, 1541, 1571, 1646, 1699, 1878, 2001
FauI	CCCGC	1 cut(s)	780
FblI	GTMKAC	1 cut(s)	273
Fnu4HI	GCNGC	2 cut(s)	1374, 1876
FokI	GGATG	6 cut(s)	425, 709, 1475, 1496, 1700, 2029
FriOI	GRGCYC	1 cut(s)	1810
Fsp4HI	GCNGC	2 cut(s)	1374, 1876
FspBI	CTAG	3 cut(s)	525, 744, 1854
GlaI	GCGC	2 cut(s)	164, 574
GluI	GCNGC	2 cut(s)	1374, 1876
GsuI	CTGGAG	2 cut(s)	1413, 2057
HaeII	RGCGCY	1 cut(s)	576
HaeIII	GGCC	5 cut(s)	12, 1025, 1522, 1875, 2100
HhaI	GCGC	2 cut(s)	165, 575
Hin1I	GRCGYC	2 cut(s)	150, 573
Hin1II	CATG	9 cut(s)	298, 730, 1360, 1545, 1575, 1650, 1703, 1882, 2005
Hin6I	GCGC	2 cut(s)	163, 573
HinP1I	GCGC	2 cut(s)	163, 573
HinfI	GANTC	7 cut(s)	218, 848, 1337, 1397, 1499, 1568, 1793
HphI	GGTGA	4 cut(s)	443, 1031, 1144, 1605
Hpy166II	GTNNAC	2 cut(s)	58, 274
Hpy8I	GTNNAC	2 cut(s)	58, 274
Hpy99I	CGWCG	1 cut(s)	155
HpyCH4III	ACNGT	4 cut(s)	55, 955, 1932, 2064
HpyCH4IV	ACGT	2 cut(s)	150, 1447
HpyCH4V	TGCA	9 cut(s)	915, 1169, 1183, 1285, 1318, 1388, 1622, 1988, 2057
HpyF10VI	GCNNNNNNNGC	6 cut(s)	262, 309, 1113, 1379, 1528, 1913
HpySE526I	ACGT	2 cut(s)	150, 1447
Hsp92I	GRCGYC	2 cut(s)	150, 573
Hsp92II	CATG	9 cut(s)	298, 730, 1360, 1545, 1575, 1650, 1703, 1882, 2005
HspAI	GCGC	2 cut(s)	163, 573
KasI	GGCGCC	1 cut(s)	572
Kzo9I	GATC	4 cut(s)	393, 1034, 1980, 2080
LguI	GCTCTTC	2 cut(s)	1464, 1771
LmnI	GCTCC	9 cut(s)	140, 203, 262, 308, 787, 1113, 1424, 1516, 1588
Lsp1109I	GCAGC	1 cut(s)	1385
LweI	GCATC	9 cut(s)	96, 667, 931, 1156, 1279, 1397, 1570, 1894, 2007
MabI	ACCWGGT	1 cut(s)	1223
MaeI	CTAG	3 cut(s)	525, 744, 1854
MaeII	ACGT	2 cut(s)	150, 1447
MaeIII	GTNAC	4 cut(s)	154, 239, 1078, 1603
MalI	GATC	4 cut(s)	395, 1036, 1982, 2082
MboI	GATC	4 cut(s)	393, 1034, 1980, 2080
MflI	RGATCY	4 cut(s)	393, 1034, 1980, 2080
MhlI	GDGCHC	3 cut(s)	267, 1810, 2107
MlsI	TGGCCA	1 cut(s)	1522
MluCI	AATT	6 cut(s)	705, 1431, 1536, 1633, 1706, 2111
MluNI	TGGCCA	1 cut(s)	1522
Mly113I	GGCGCC	1 cut(s)	573
MlyI	GAGTC	1 cut(s)	212
MmeI	TCCRAC	3 cut(s)	162, 240, 1865
Mox20I	TGGCCA	1 cut(s)	1522
Mph1103I	ATGCAT	1 cut(s)	1171
MroXI	GAANNNNTTC	2 cut(s)	1695, 1707
MscI	TGGCCA	1 cut(s)	1522
MseI	TTAA	6 cut(s)	711, 810, 837, 1044, 1068, 1719
Msp20I	TGGCCA	1 cut(s)	1522
MspR9I	CCNGG	4 cut(s)	1225, 1370, 1533, 1815
Mva1269I	GAATGC	2 cut(s)	915, 1916
MvaI	CCWGG	4 cut(s)	1225, 1370, 1533, 1815
MwoI	GCNNNNNNNGC	6 cut(s)	262, 309, 1113, 1379, 1528, 1913
NarI	GGCGCC	1 cut(s)	573
NcoI	CCATGG	1 cut(s)	1356
NdeII	GATC	4 cut(s)	393, 1034, 1980, 2080
NlaIII	CATG	9 cut(s)	298, 730, 1360, 1545, 1575, 1650, 1703, 1882, 2005
NlaIV	GGNNCC	7 cut(s)	574, 643, 664, 789, 927, 1982, 2131
NmeAIII	GCCGAG	1 cut(s)	2126
NmuCI	GTSAC	2 cut(s)	154, 239
NsiI	ATGCAT	1 cut(s)	1171
NspI	RCATGY	2 cut(s)	298, 1882
PaeR7I	CTCGAG	1 cut(s)	1958
PagI	TCATGA	2 cut(s)	726, 1699
PceI	AGGCCT	1 cut(s)	1025
PciI	ACATGT	1 cut(s)	294
PciSI	GCTCTTC	2 cut(s)	1464, 1771
PcsI	WCGNNNNNNNCGW	2 cut(s)	78, 282
PctI	GAATGC	2 cut(s)	915, 1916
PdmI	GAANNNNTTC	2 cut(s)	1695, 1707
PfeI	GAWTC	6 cut(s)	848, 1337, 1397, 1499, 1568, 1793
PflFI	GACNNNGTC	1 cut(s)	152
PkrI	GCNGC	2 cut(s)	1375, 1877
PleI	GAGTC	1 cut(s)	212
PluTI	GGCGCC	1 cut(s)	576
PpsI	GAGTC	1 cut(s)	212
PscI	ACATGT	1 cut(s)	294
Psp6I	CCWGG	4 cut(s)	1223, 1368, 1531, 1813
PspGI	CCWGG	4 cut(s)	1223, 1368, 1531, 1813
PspN4I	GGNNCC	7 cut(s)	574, 643, 664, 789, 927, 1982, 2131
PspPI	GGNCC	4 cut(s)	10, 581, 663, 1873
PspXI	VCTCGAGB	1 cut(s)	1958
PstNI	CAGNNNCTG	1 cut(s)	1382
PsuI	RGATCY	4 cut(s)	393, 1034, 1980, 2080
PsyI	GACNNNGTC	1 cut(s)	152
RsaI	GTAC	3 cut(s)	59, 733, 2066
RsaNI	GTAC	3 cut(s)	58, 732, 2065
SapI	GCTCTTC	2 cut(s)	1464, 1771
SaqAI	TTAA	6 cut(s)	711, 810, 837, 1044, 1068, 1719
SatI	GCNGC	2 cut(s)	1374, 1876
Sau3AI	GATC	4 cut(s)	393, 1034, 1980, 2080
Sau96I	GGNCC	4 cut(s)	10, 581, 663, 1873
ScaI	AGTACT	1 cut(s)	733
SchI	GAGTC	1 cut(s)	212
ScrFI	CCNGG	4 cut(s)	1225, 1370, 1533, 1815
SduI	GDGCHC	3 cut(s)	267, 1810, 2107
SexAI	ACCWGGT	1 cut(s)	1223
SfaNI	GCATC	9 cut(s)	96, 667, 931, 1156, 1279, 1397, 1570, 1894, 2007
SfoI	GGCGCC	1 cut(s)	574
Sfr274I	CTCGAG	1 cut(s)	1958
SinI	GGWCC	2 cut(s)	581, 663
SlaI	CTCGAG	1 cut(s)	1958
SmlI	CTYRAG	3 cut(s)	257, 397, 1958
SmoI	CTYRAG	3 cut(s)	257, 397, 1958
SpeI	ACTAGT	1 cut(s)	743
Sse9I	AATT	6 cut(s)	705, 1431, 1536, 1633, 1706, 2111
SseBI	AGGCCT	1 cut(s)	1025
SsiI	CCGC	2 cut(s)	773, 1876
SspDI	GGCGCC	1 cut(s)	572
SspI	AATATT	1 cut(s)	1264
SspMI	CTAG	3 cut(s)	525, 744, 1854
StuI	AGGCCT	1 cut(s)	1025
StyD4I	CCNGG	4 cut(s)	1223, 1368, 1531, 1813
StyI	CCWWGG	2 cut(s)	1356, 2095
TaaI	ACNGT	4 cut(s)	55, 955, 1932, 2064
TaiI	ACGT	2 cut(s)	153, 1450
TaqI	TCGA	5 cut(s)	81, 321, 919, 932, 1959
TasI	AATT	6 cut(s)	705, 1431, 1536, 1633, 1706, 2111
TatI	WGTACW	2 cut(s)	57, 731
TauI	GCSGC	1 cut(s)	1878
TfiI	GAWTC	6 cut(s)	848, 1337, 1397, 1499, 1568, 1793
Tru1I	TTAA	6 cut(s)	711, 810, 837, 1044, 1068, 1719
Tru9I	TTAA	6 cut(s)	711, 810, 837, 1044, 1068, 1719
TscAI	CASTG	7 cut(s)	48, 60, 697, 1114, 1200, 1414, 1937
TseFI	GTSAC	2 cut(s)	154, 239
TseI	GCWGC	1 cut(s)	1373
Tsp45I	GTSAC	2 cut(s)	154, 239
TspGWI	ACGGA	1 cut(s)	49
TspRI	CASTG	7 cut(s)	48, 60, 697, 1114, 1200, 1414, 1937
Tth111I	GACNNNGTC	1 cut(s)	152
VpaK11BI	GGWCC	2 cut(s)	581, 663
XagI	CCTNNNNNAGG	1 cut(s)	1127
XapI	RAATTY	3 cut(s)	1536, 1633, 1706
XceI	RCATGY	2 cut(s)	298, 1882
XhoI	CTCGAG	1 cut(s)	1958
XmiI	GTMKAC	1 cut(s)	273
XmnI	GAANNNNTTC	2 cut(s)	1695, 1707
XspI	CTAG	3 cut(s)	525, 744, 1854
ZraI	GACGTC	1 cut(s)	151
ZrmI	AGTACT	1 cut(s)	733
Zsp2I	ATGCAT	1 cut(s)	1171

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.