Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0006977

Physical Location & Seq

Genomic Coordinates Forward (+)

20914255 .. 20916888

Gene Structure 2634 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g18860.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2112 bp

ATGTATTGGTATTATGGTCTAGTTGTTATAGCGAAGAAATCCATATCAGATTTCTTTGCTTATGGAGAGCCCGTTCAAATGCGTACATACAAGGTCAAGTTCTATTCCAATTACACTGTCATATTGACGTTATATACCAATAATACAAAAACATGTATTAGTTCATCTTTGTATATTTTTGAATTATTGACCCGAGATGTCAATGTGACCGTATATCCACGTCGTACAAATTGCTCTGGTCAAATAAACTGGACCATATTTGTCTCTGGATTTGACCCACAAATAAGTGCTCGGGTTGCCTCTTTGGATTTGACCCACAATATACTCGCGGACTTAACAGAATCAACCGATCAACCGAACAAGACAGAGTCGGTGTTAGAGAGCTACAAATTCCAAATTCCTAATTGCGATCGGAAAACCCCTTTTCTCAGCAAAAAGATGGAGAAGAGCCAACCGCCGCCGCAGCAGCAGCAGCCCATGTCAGTGAAAGAAACAGTGTACAAGCTCCAACTCGCTCTCCTCGACGGCGTCAAAACCCTTGACCAACTCTACTTGGCCGGCTCAATAATCTCCCGCTCCGATTACAGCGACGTCGTCACGGAGCGCACCATAGCCGACCACTGCGGCTACCCTCTATGCCCCCATGCCTTGCCTCCGGAATCCTCCCGCCCCCGCAAGGGCCACTATCGCATTTCACTCAAGGAGCACAAGGTCTACGACCTTCATGAGACCTACATGTACTGCTCCTCGAGCTGTCTTATCGAAAGCAAGGCTTTTGCTCAGAGTTTGAGCGAGGAGAGGTGCGATGTCTTGGATTATGGCAAGGTTGAGAAGGTCTTGAGGGCTTTTGGGGATGTGGGTTTGGACAAAGGGGAAGTGGGATTGGGGGAGACTGGGGATTTGGGAATTTCGAAGTTGAAGATCGAAGAAAAGAGCAAAGCGGAGATTGGGGATTTGGGGATTTCTAAGTTGAAGATTGAAGAAAAGAGTGAAGTGCAGTTAGGGGATGTGGGCGTGGATGGTCCCTCTAATGCTATTGAGGGCTATGTTCCACACAATCAGCGGATATCCAAGCCATTGGGTTCGAAAAAGAACAAAAAAGGGTCCAAGGGTAAAGAAGCGAAAACGAGTGGCGGGAAGGATATGATCTTTAATGAGATGGATTTCATGAGTTGTATAATCGCTAGTGATGAATACAGTGTGTCCAAAATTCCACCAAGTTCTGGGGAGAATGGTTGTGAAACTAAGTTTAAGGAATCAGAAGAAAAATTTGCTCATATTAAGAATGATTCTGAAAAGAAATCCAAACAATCAAGAGGGGGAAAAAGTAAGATTTCCAAGGAAGATGATGTTGGCATTCAAGAGGCGCCTTCAACTTCAGAGACTTCTCAAACTATTTTGATTAGAAGTACTAAAGAAGCAAGAGAGGAATTCCCTGGTGATAAGGAGAAATCAAATGTGCCAAAGCTAAGATCCTCTCTTAAACCTTCAGGGGCAAAAAAACTTAATCGCTCTGTTACTTGGGCTGACGAGAAGGTGGAACATAGAATGAATGGTTATGATACATTGGGCAGTATCCACAAACCTTTGCTTAAACCTTCAGTGGAAAATGAAGTCGGTTGCTCTGTTACCTGGTCTGATGAGAAGATTGATAGCACTAAGAGTAAAAATGTTTGCGAGGTTAAAGAAGTGCAAGGTGCAAAAGAGGGTTCTGGTGTATTAGGGAATTTGGAATTGCTAGATAATGAACGTTTGGAATCCGCAGAATTCTGTGCCATGGCATTGAGGCAGGTAGCAGAAGCTGTTGCATCTGGAGAATCTGATGTCAATGATGCTGTTTCGAGTGCTGGAATTATTTTATTGCCACGTCCAGATGGTGCGGATGAAGAAGAGCCTACTGAGGATGTTGACATGCTTGAACCAGAACAAGCTCCTCTGCAGCAAAGAAATCCTGGAAATCCAAATTTTGATTTGTTTGACTCTGAGGATACTTGGTTTGATCGATCCACCAGAGGGTTTCAACTTAACTTTATCACCTTTTTTAACAATGTGGAATTCACTCTTTACATGGATAACATCATCTACACTGGCATATATATATGGGAGGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006357 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008420 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019219 GO:0019222 GO:0019538 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070940 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RPAP2_Rtr1

Protein Analysis

704

Amino Acids

78.46

Weight (kDa)

5.32

Isoelectric Point (pI)

42.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006977)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G26760 AT5G26760
fragaria_vesca	FvH4_6g08180 FvH4_6g08180 FvH4_6g08180 FvH4_6g08180 FvH4_6g08180 FvH4_6g08180
malus_domestica	MD04G1189300.v1.1 MD12G1202100.v1.1
prunus_persica	Prupe.6G306900_v2.0.a1
pyrus_communis	pycom04g16770 pycom12g18860
rosa_chinensis	RchiOBHm_Chr3g0458051
rosa_laevigata	RLG00000025177
rosa_multiflora	Rmu_sc0000384.1_g000014
rosa_roxburghii	Rroxscaffold_6G00421320
rosa_rugosa	Rorug03G0024600 Rorug03G0024600
rosa_samantha	Rh3AG085100 Rh3BG087900 Rh3CG088400 Rh3DG088800
rosa_wichuraiana	Rw0G012430 Rw3G007250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	594
Acc36I	ACCTGC	1 cut(s)	1780
AccB1I	GGYRCC	1 cut(s)	1366
AccB7I	CCANNNNNTGG	1 cut(s)	1223
AccBSI	CCGCTC	1 cut(s)	576
AccI	GTMKAC	1 cut(s)	714
AccII	CGCG	1 cut(s)	329
AccIII	TCCGGA	1 cut(s)	655
AclI	AACGTT	1 cut(s)	1750
AclWI	GGATC	2 cut(s)	1467, 1998
AcoI	YGGCCR	1 cut(s)	555
AcuI	CTGAAG	3 cut(s)	1362, 1473, 1584
AcyI	GRCGYC	3 cut(s)	528, 591, 1367
AfaI	GTAC	5 cut(s)	85, 226, 500, 740, 1411
AfiI	CCNNNNNNNGG	4 cut(s)	676, 677, 1223, 2013
AflIII	ACRYGT	2 cut(s)	152, 735
AgsI	TTSAA	9 cut(s)	77, 182, 919, 973, 980, 1361, 1374, 1919, 2021
AjiI	CACGTC	2 cut(s)	221, 1868
AjnI	CCWGG	3 cut(s)	1435, 1631, 1951
AjuI	GAANNNNNNNTTGG	2 cut(s)	1335, 1367
AloI	GAACNNNNNNTCC	2 cut(s)	57, 89
AluBI	AGCT	6 cut(s)	384, 505, 753, 1468, 1802, 1931
AluI	AGCT	6 cut(s)	384, 505, 753, 1468, 1802, 1931
Alw21I	GWGCWC	2 cut(s)	292, 708
Alw26I	GTCTC	4 cut(s)	268, 722, 884, 1376
AlwI	GGATC	2 cut(s)	1467, 1998
AlwNI	CAGNNNCTG	1 cut(s)	1802
Ama87I	CYCGRG	3 cut(s)	192, 291, 748
Aor13HI	TCCGGA	1 cut(s)	655
AoxI	GGCC	2 cut(s)	555, 679
ApeKI	GCWGC	5 cut(s)	463, 466, 469, 472, 1939
ArsI	GACNNNNNNTTYG	2 cut(s)	883, 915
AspLEI	GCGC	2 cut(s)	606, 1369
AspS9I	GGNCC	4 cut(s)	252, 679, 1022, 1104
AsuHPI	GGTGA	2 cut(s)	1451, 2026
AsuII	TTCGAA	2 cut(s)	911, 1085
AvaI	CYCGRG	3 cut(s)	192, 291, 748
AvaII	GGWCC	3 cut(s)	252, 1022, 1104
BanI	GGYRCC	1 cut(s)	1366
BanII	GRGCYC	1 cut(s)	72
Bbv12I	GWGCWC	2 cut(s)	292, 708
BbvI	GCAGC	5 cut(s)	475, 478, 481, 484, 1951
BccI	CCATC	4 cut(s)	433, 1013, 1153, 1868
BceAI	ACGGC	1 cut(s)	541
BciT130I	CCWGG	3 cut(s)	1437, 1633, 1953
BciVI	GTATCC	2 cut(s)	1586, 1981
BcoDI	GTCTC	4 cut(s)	268, 722, 884, 1376
BfaI	CTAG	3 cut(s)	20, 1185, 1739
BfmI	CTRYAG	1 cut(s)	1937
BfoI	RGCGCY	1 cut(s)	1370
BfuAI	ACCTGC	1 cut(s)	1780
BfuI	GTATCC	2 cut(s)	1586, 1981
BisI	GCNGC	8 cut(s)	458, 461, 464, 467, 470, 473, 625, 1940
BlsI	GCNGC	8 cut(s)	459, 462, 465, 468, 471, 474, 626, 1941
BmcAI	AGTACT	1 cut(s)	1411
Bme1390I	CCNGG	3 cut(s)	1437, 1633, 1953
Bme18I	GGWCC	3 cut(s)	252, 1022, 1104
BmeT110I	CYCGRG	3 cut(s)	192, 291, 748
BmgBI	CACGTC	2 cut(s)	221, 1868
BmgT120I	GGNCC	4 cut(s)	252, 679, 1022, 1104
BmiI	GGNNCC	3 cut(s)	1024, 1105, 1368
BmrFI	CCNGG	3 cut(s)	1437, 1633, 1953
BmrI	ACTGGG	1 cut(s)	903
BmsI	GCATC	2 cut(s)	1817, 1822
BmuI	ACTGGG	1 cut(s)	903
BpmI	CTGGAG	1 cut(s)	1833
Bpu14I	TTCGAA	2 cut(s)	911, 1085
BpuEI	CTTGAG	2 cut(s)	683, 859
Bsa29I	ATCGAT	1 cut(s)	2002
BsaHI	GRCGYC	3 cut(s)	528, 591, 1367
BsaI	GGTCTC	1 cut(s)	722
BsaJI	CCNNGG	4 cut(s)	1107, 1338, 1435, 1776
BsaWI	WCCGGW	1 cut(s)	655
BsaXI	ACNNNNNCTCC	4 cut(s)	57, 87, 501, 531
Bsc4I	CCNNNNNNNGG	4 cut(s)	676, 677, 1223, 2013
Bse118I	RCCGGY	1 cut(s)	557
Bse1I	ACTGG	3 cut(s)	254, 898, 2092
BseAI	TCCGGA	1 cut(s)	655
BseBI	CCWGG	3 cut(s)	1437, 1633, 1953
BseCI	ATCGAT	1 cut(s)	2002
BseDI	CCNNGG	4 cut(s)	1107, 1338, 1435, 1776
BseGI	GGATG	5 cut(s)	859, 1012, 1024, 1888, 1909
BseLI	CCNNNNNNNGG	4 cut(s)	676, 677, 1223, 2013
BseMII	CTCAG	4 cut(s)	442, 794, 1890, 1974
BseNI	ACTGG	3 cut(s)	254, 898, 2092
BseRI	GAGGAG	4 cut(s)	509, 736, 809, 1923
BseXI	GCAGC	5 cut(s)	475, 478, 481, 484, 1951
BsgI	GTGCAG	1 cut(s)	1016
Bsh1236I	CGCG	1 cut(s)	329
Bsh1285I	CGRYCG	1 cut(s)	412
BshFI	GGCC	2 cut(s)	557, 681
BshNI	GGYRCC	1 cut(s)	1366
BshVI	ATCGAT	1 cut(s)	2002
BsiEI	CGRYCG	1 cut(s)	412
BsiHKAI	GWGCWC	2 cut(s)	292, 708
BsiHKCI	CYCGRG	3 cut(s)	192, 291, 748
BsiSI	CCGG	2 cut(s)	558, 656
BslFI	GGGAC	1 cut(s)	1008
BslI	CCNNNNNNNGG	4 cut(s)	676, 677, 1223, 2013
BsmAI	GTCTC	4 cut(s)	268, 722, 884, 1376
BsmFI	GGGAC	1 cut(s)	1008
BsmI	GAATGC	1 cut(s)	1356
BsnI	GGCC	2 cut(s)	557, 681
Bso31I	GGTCTC	1 cut(s)	722
BsoBI	CYCGRG	3 cut(s)	192, 291, 748
Bsp119I	TTCGAA	2 cut(s)	911, 1085
Bsp1286I	GDGCHC	3 cut(s)	72, 292, 708
Bsp13I	TCCGGA	1 cut(s)	655
Bsp1407I	TGTACA	1 cut(s)	498
Bsp143I	GATC	7 cut(s)	349, 409, 921, 1146, 1472, 1999, 2003
Bsp19I	CCATGG	1 cut(s)	1776
BspANI	GGCC	2 cut(s)	557, 681
BspCNI	CTCAG	4 cut(s)	441, 793, 1891, 1975
BspDI	ATCGAT	1 cut(s)	2002
BspEI	TCCGGA	1 cut(s)	655
BspFNI	CGCG	1 cut(s)	329
BspHI	TCATGA	2 cut(s)	724, 1167
BspLI	GGNNCC	3 cut(s)	1024, 1105, 1368
BspMAI	CTGCAG	1 cut(s)	1941
BspMI	ACCTGC	1 cut(s)	1780
BspPI	GGATC	2 cut(s)	1467, 1998
BspQI	GCTCTTC	2 cut(s)	440, 1884
BspT104I	TTCGAA	2 cut(s)	911, 1085
BspT107I	GGYRCC	1 cut(s)	1366
BspTNI	GGTCTC	1 cut(s)	722
BsrBI	CCGCTC	1 cut(s)	576
BsrFI	RCCGGY	1 cut(s)	557
BsrGI	TGTACA	1 cut(s)	498
BsrI	ACTGG	3 cut(s)	254, 898, 2092
BssAI	RCCGGY	1 cut(s)	557
BssECI	CCNNGG	4 cut(s)	1107, 1338, 1435, 1776
BssMI	GATC	7 cut(s)	349, 409, 921, 1146, 1472, 1999, 2003
BssNI	GRCGYC	3 cut(s)	528, 591, 1367
BssT1I	CCWWGG	3 cut(s)	1107, 1338, 1776
Bst2UI	CCWGG	3 cut(s)	1437, 1633, 1953
Bst4CI	ACNGT	4 cut(s)	118, 211, 496, 1199
Bst6I	CTCTTC	2 cut(s)	440, 1884
BstACI	GRCGYC	3 cut(s)	528, 591, 1367
BstAUI	TGTACA	1 cut(s)	498
BstBI	TTCGAA	2 cut(s)	911, 1085
BstC8I	GCNNGC	1 cut(s)	559
BstDEI	CTNAG	8 cut(s)	428, 780, 966, 1245, 1469, 1659, 1899, 1983
BstDSI	CCRYGG	1 cut(s)	1776
BstF5I	GGATG	5 cut(s)	859, 1012, 1024, 1888, 1909
BstFNI	CGCG	1 cut(s)	329
BstH2I	RGCGCY	1 cut(s)	1370
BstHHI	GCGC	2 cut(s)	606, 1369
BstKTI	GATC	7 cut(s)	352, 412, 924, 1149, 1475, 2002, 2006
BstMAI	GTCTC	4 cut(s)	268, 722, 884, 1376
BstMBI	GATC	7 cut(s)	349, 409, 921, 1146, 1472, 1999, 2003
BstMCI	CGRYCG	1 cut(s)	412
BstMWI	GCNNNNNNNGC	7 cut(s)	296, 463, 466, 469, 472, 687, 750
BstNI	CCWGG	3 cut(s)	1437, 1633, 1953
BstNSI	RCATGY	3 cut(s)	156, 739, 1915
BstSCI	CCNGG	3 cut(s)	1435, 1631, 1951
BstSFI	CTRYAG	1 cut(s)	1937
BstUI	CGCG	1 cut(s)	329
BstV1I	GCAGC	5 cut(s)	475, 478, 481, 484, 1951
BstX2I	RGATCY	1 cut(s)	1472
BstXI	CCANNNNNNTGG	1 cut(s)	1078
BstYI	RGATCY	1 cut(s)	1472
Bsu15I	ATCGAT	1 cut(s)	2002
BsuI	GTATCC	2 cut(s)	1586, 1981
BsuRI	GGCC	2 cut(s)	557, 681
BsuTUI	ATCGAT	1 cut(s)	2002
BtgI	CCRYGG	1 cut(s)	1776
BtgZI	GCGATG	1 cut(s)	819
BtrI	CACGTC	2 cut(s)	221, 1868
BtsCI	GGATG	5 cut(s)	859, 1012, 1024, 1888, 1909
BtsI	GCAGTG	1 cut(s)	619
BtsIMutI	CAGTG	7 cut(s)	114, 489, 501, 619, 1204, 1608, 2085
BveI	ACCTGC	1 cut(s)	1780
Cac8I	GCNNGC	1 cut(s)	559
CaiI	CAGNNNCTG	1 cut(s)	1802
CciI	TCATGA	2 cut(s)	724, 1167
CfoI	GCGC	2 cut(s)	606, 1369
Cfr10I	RCCGGY	1 cut(s)	557
Cfr13I	GGNCC	4 cut(s)	252, 679, 1022, 1104
ClaI	ATCGAT	1 cut(s)	2002
CseI	GACGC	1 cut(s)	517
CsiI	ACCWGGT	1 cut(s)	1631
Csp6I	GTAC	5 cut(s)	84, 225, 499, 739, 1410
CviAII	CATG	9 cut(s)	153, 478, 644, 725, 736, 1168, 1777, 1912, 2068
CviQI	GTAC	5 cut(s)	84, 225, 499, 739, 1410
DdeI	CTNAG	8 cut(s)	428, 780, 966, 1245, 1469, 1659, 1899, 1983
DinI	GGCGCC	1 cut(s)	1368
DpnI	GATC	7 cut(s)	351, 411, 923, 1148, 1474, 2001, 2005
DpnII	GATC	7 cut(s)	349, 409, 921, 1146, 1472, 1999, 2003
EaeI	YGGCCR	1 cut(s)	555
Eam1104I	CTCTTC	2 cut(s)	440, 1884
EarI	CTCTTC	2 cut(s)	440, 1884
Eco130I	CCWWGG	3 cut(s)	1107, 1338, 1776
Eco24I	GRGCYC	1 cut(s)	72
Eco31I	GGTCTC	1 cut(s)	722
Eco32I	GATATC	1 cut(s)	1068
Eco47I	GGWCC	3 cut(s)	252, 1022, 1104
Eco57I	CTGAAG	3 cut(s)	1362, 1473, 1584
Eco88I	CYCGRG	3 cut(s)	192, 291, 748
EcoRI	GAATTC	3 cut(s)	1430, 1766, 2054
EcoRII	CCWGG	3 cut(s)	1435, 1631, 1951
EcoRV	GATATC	1 cut(s)	1068
EcoT14I	CCWWGG	3 cut(s)	1107, 1338, 1776
EcoT38I	GRGCYC	1 cut(s)	72
EgeI	GGCGCC	1 cut(s)	1368
EheI	GGCGCC	1 cut(s)	1368
ErhI	CCWWGG	3 cut(s)	1107, 1338, 1776
FaeI	CATG	9 cut(s)	156, 481, 647, 728, 739, 1171, 1780, 1915, 2071
FalI	AAGNNNNNCTT	2 cut(s)	757, 789
FaqI	GGGAC	1 cut(s)	1008
FatI	CATG	9 cut(s)	152, 477, 643, 724, 735, 1167, 1776, 1911, 2067
FauI	CCCGC	4 cut(s)	581, 674, 680, 1127
FblI	GTMKAC	1 cut(s)	714
Fnu4HI	GCNGC	8 cut(s)	458, 461, 464, 467, 470, 473, 625, 1940
FokI	GGATG	5 cut(s)	866, 1019, 1031, 1895, 1916
FriOI	GRGCYC	1 cut(s)	72
Fsp4HI	GCNGC	8 cut(s)	458, 461, 464, 467, 470, 473, 625, 1940
FspBI	CTAG	3 cut(s)	20, 1185, 1739
GlaI	GCGC	2 cut(s)	605, 1368
GluI	GCNGC	8 cut(s)	458, 461, 464, 467, 470, 473, 625, 1940
GsuI	CTGGAG	1 cut(s)	1833
HaeII	RGCGCY	1 cut(s)	1370
HaeIII	GGCC	2 cut(s)	557, 681
HapII	CCGG	2 cut(s)	558, 656
HgaI	GACGC	1 cut(s)	517
HhaI	GCGC	2 cut(s)	606, 1369
Hin1I	GRCGYC	3 cut(s)	528, 591, 1367
Hin1II	CATG	9 cut(s)	156, 481, 647, 728, 739, 1171, 1780, 1915, 2071
Hin6I	GCGC	2 cut(s)	604, 1367
HinP1I	GCGC	2 cut(s)	604, 1367
HincII	GTYRAC	1 cut(s)	1909
HindII	GTYRAC	1 cut(s)	1909
HinfI	GANTC	8 cut(s)	341, 368, 659, 1256, 1289, 1757, 1817, 1979
HpaII	CCGG	2 cut(s)	558, 656
HphI	GGTGA	2 cut(s)	1451, 2026
Hpy166II	GTNNAC	3 cut(s)	499, 715, 1909
Hpy188III	TCNNGA	9 cut(s)	267, 656, 725, 838, 1168, 1314, 1361, 1812, 1871
Hpy8I	GTNNAC	3 cut(s)	499, 715, 1909
Hpy99I	CGWCG	4 cut(s)	225, 527, 593, 596
HpyAV	CCTTC	7 cut(s)	731, 826, 1132, 1380, 1497, 1528, 1608
HpyCH4III	ACNGT	4 cut(s)	118, 211, 496, 1199
HpyCH4IV	ACGT	5 cut(s)	128, 220, 591, 1750, 1867
HpyCH4V	TGCA	5 cut(s)	997, 1693, 1700, 1808, 1939
HpyF10VI	GCNNNNNNNGC	7 cut(s)	296, 463, 466, 469, 472, 687, 750
HpyF3I	CTNAG	8 cut(s)	428, 780, 966, 1245, 1469, 1659, 1899, 1983
HpySE526I	ACGT	5 cut(s)	128, 220, 591, 1750, 1867
Hsp92I	GRCGYC	3 cut(s)	528, 591, 1367
Hsp92II	CATG	9 cut(s)	156, 481, 647, 728, 739, 1171, 1780, 1915, 2071
HspAI	GCGC	2 cut(s)	604, 1367
KasI	GGCGCC	1 cut(s)	1366
Kpn2I	TCCGGA	1 cut(s)	655
KroI	GCCGGC	1 cut(s)	557
KroNI	GCCGGC	1 cut(s)	559
Kzo9I	GATC	7 cut(s)	349, 409, 921, 1146, 1472, 1999, 2003
LguI	GCTCTTC	2 cut(s)	440, 1884
LmnI	GCTCC	6 cut(s)	510, 581, 601, 703, 749, 1936
Lsp1109I	GCAGC	5 cut(s)	475, 478, 481, 484, 1951
LweI	GCATC	2 cut(s)	1817, 1822
MabI	ACCWGGT	1 cut(s)	1631
MaeI	CTAG	3 cut(s)	20, 1185, 1739
MaeII	ACGT	5 cut(s)	128, 220, 591, 1750, 1867
MaeIII	GTNAC	4 cut(s)	205, 595, 1516, 1627
MalI	GATC	7 cut(s)	351, 411, 923, 1148, 1474, 2001, 2005
MbiI	CCGCTC	1 cut(s)	576
MboI	GATC	7 cut(s)	349, 409, 921, 1146, 1472, 1999, 2003
MflI	RGATCY	1 cut(s)	1472
MhlI	GDGCHC	3 cut(s)	72, 292, 708
Mly113I	GGCGCC	1 cut(s)	1367
MlyI	GAGTC	2 cut(s)	377, 1973
MmeI	TCCRAC	1 cut(s)	532
MroI	TCCGGA	1 cut(s)	655
MroNI	GCCGGC	1 cut(s)	557
MslI	CAYNNNNRTG	1 cut(s)	482
MspA1I	CMGCKG	1 cut(s)	1063
MspI	CCGG	2 cut(s)	558, 656
MspR9I	CCNGG	3 cut(s)	1437, 1633, 1953
Mva1269I	GAATGC	1 cut(s)	1356
MvaI	CCWGG	3 cut(s)	1437, 1633, 1953
MvnI	CGCG	1 cut(s)	329
MwoI	GCNNNNNNNGC	7 cut(s)	296, 463, 466, 469, 472, 687, 750
NaeI	GCCGGC	1 cut(s)	559
NarI	GGCGCC	1 cut(s)	1367
NcoI	CCATGG	1 cut(s)	1776
NdeII	GATC	7 cut(s)	349, 409, 921, 1146, 1472, 1999, 2003
NgoMIV	GCCGGC	1 cut(s)	557
NlaIII	CATG	9 cut(s)	156, 481, 647, 728, 739, 1171, 1780, 1915, 2071
NlaIV	GGNNCC	3 cut(s)	1024, 1105, 1368
NmuCI	GTSAC	2 cut(s)	205, 595
NspI	RCATGY	3 cut(s)	156, 739, 1915
NspV	TTCGAA	2 cut(s)	911, 1085
PaeR7I	CTCGAG	1 cut(s)	748
PagI	TCATGA	2 cut(s)	724, 1167
PciI	ACATGT	2 cut(s)	152, 735
PciSI	GCTCTTC	2 cut(s)	440, 1884
PcsI	WCGNNNNNNNCGW	1 cut(s)	519
PctI	GAATGC	1 cut(s)	1356
PdiI	GCCGGC	1 cut(s)	559
PfeI	GAWTC	6 cut(s)	341, 659, 1256, 1289, 1757, 1817
PflFI	GACNNNGTC	3 cut(s)	367, 527, 593
PflMI	CCANNNNNTGG	1 cut(s)	1223
PfoI	TCCNGGA	1 cut(s)	1951
PkrI	GCNGC	8 cut(s)	459, 462, 465, 468, 471, 474, 626, 1941
Ple19I	CGATCG	1 cut(s)	412
PleI	GAGTC	2 cut(s)	376, 1973
PluTI	GGCGCC	1 cut(s)	1370
PpsI	GAGTC	2 cut(s)	376, 1973
PscI	ACATGT	2 cut(s)	152, 735
Psp1406I	AACGTT	1 cut(s)	1750
Psp6I	CCWGG	3 cut(s)	1435, 1631, 1951
PspGI	CCWGG	3 cut(s)	1435, 1631, 1951
PspN4I	GGNNCC	3 cut(s)	1024, 1105, 1368
PspPI	GGNCC	4 cut(s)	252, 679, 1022, 1104
PspXI	VCTCGAGB	1 cut(s)	748
PstI	CTGCAG	1 cut(s)	1941
PstNI	CAGNNNCTG	1 cut(s)	1802
PsuI	RGATCY	1 cut(s)	1472
PsyI	GACNNNGTC	3 cut(s)	367, 527, 593
PvuI	CGATCG	1 cut(s)	412
RsaI	GTAC	5 cut(s)	85, 226, 500, 740, 1411
RsaNI	GTAC	5 cut(s)	84, 225, 499, 739, 1410
RseI	CAYNNNNRTG	1 cut(s)	482
SapI	GCTCTTC	2 cut(s)	440, 1884
SatI	GCNGC	8 cut(s)	458, 461, 464, 467, 470, 473, 625, 1940
Sau3AI	GATC	7 cut(s)	349, 409, 921, 1146, 1472, 1999, 2003
Sau96I	GGNCC	4 cut(s)	252, 679, 1022, 1104
ScaI	AGTACT	1 cut(s)	1411
SchI	GAGTC	2 cut(s)	377, 1973
ScrFI	CCNGG	3 cut(s)	1437, 1633, 1953
SduI	GDGCHC	3 cut(s)	72, 292, 708
SexAI	ACCWGGT	1 cut(s)	1631
SfaNI	GCATC	2 cut(s)	1817, 1822
SfcI	CTRYAG	1 cut(s)	1937
SfoI	GGCGCC	1 cut(s)	1368
Sfr274I	CTCGAG	1 cut(s)	748
SfuI	TTCGAA	2 cut(s)	911, 1085
SinI	GGWCC	3 cut(s)	252, 1022, 1104
SlaI	CTCGAG	1 cut(s)	748
SmiMI	CAYNNNNRTG	1 cut(s)	482
SmlI	CTYRAG	3 cut(s)	698, 748, 838
SmoI	CTYRAG	3 cut(s)	698, 748, 838
SspDI	GGCGCC	1 cut(s)	1366
SspMI	CTAG	3 cut(s)	20, 1185, 1739
StyD4I	CCNGG	3 cut(s)	1435, 1631, 1951
StyI	CCWWGG	3 cut(s)	1107, 1338, 1776
TaaI	ACNGT	4 cut(s)	118, 211, 496, 1199
TaiI	ACGT	5 cut(s)	131, 223, 594, 1753, 1870
TaqI	TCGA	8 cut(s)	522, 749, 762, 911, 924, 1085, 1841, 2002
TatI	WGTACW	3 cut(s)	498, 738, 1409
TauI	GCSGC	3 cut(s)	460, 463, 627
TfiI	GAWTC	6 cut(s)	341, 659, 1256, 1289, 1757, 1817
TscAI	CASTG	7 cut(s)	121, 489, 501, 626, 1204, 1608, 2092
TseFI	GTSAC	2 cut(s)	205, 595
TseI	GCWGC	5 cut(s)	463, 466, 469, 472, 1939
Tsp45I	GTSAC	2 cut(s)	205, 595
TspDTI	ATGAA	8 cut(s)	153, 713, 1156, 1206, 1565, 1626, 1761, 1899
TspGWI	ACGGA	1 cut(s)	614
TspRI	CASTG	7 cut(s)	121, 489, 501, 626, 1204, 1608, 2092
Tth111I	GACNNNGTC	3 cut(s)	367, 527, 593
Van91I	CCANNNNNTGG	1 cut(s)	1223
VpaK11BI	GGWCC	3 cut(s)	252, 1022, 1104
XceI	RCATGY	3 cut(s)	156, 739, 1915
XhoI	CTCGAG	1 cut(s)	748
XmiI	GTMKAC	1 cut(s)	714
XspI	CTAG	3 cut(s)	20, 1185, 1739
ZraI	GACGTC	1 cut(s)	592
ZrmI	AGTACT	1 cut(s)	1411

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.