Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00549

Orthogroup ID

OG0006977

Physical Location & Seq

Genomic Coordinates Reverse (-)

214287 .. 218611

Gene Structure 4325 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G012430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1629 bp

ATGGAAAAGCACGAGCATCAGAATCCATCGAAGTCAGTGAACGACGCAGTGTACAAGCTCCAGCTGGCACTCCTCGACGGCGTCAAAACCCTAGACCACCTCTACTTAGCCGGCTCCATAATCTCCCGCTCCGACTACAACGACGTCGTCACGGAGCGATCCATCGCCGACCTATGCGGCTACCCTCTCTGCTCCAATGCCCTACCTTCCGAAGCTTCCCGTTCCCGCAAGGGTCACTATCGCATTTCGCTCAAGGAGCACAAGGTGTACGATCTCCGAGAGACGAAGCTCTACTGCTCCTCCAAGTGCGTGATCGATAGCAAGGCGTTTGCTCTGAGCTTGAGCGAGGAGAGGTGTGATATCTTGGATTTCGGAAAGGTCGAGAGGGTTTTGGGGCAATTTGGGGAAAAAGATGAACAAGGCAAGAAGGAGATTGGGGATTTGGGGATTTCTAACTTGAAGATTGAAGAAAAGAGTGAGACTTATAGTGGGAAATTGGAGGACTGGGTTGGTCCTTCCAATGCCATTGAAGGATATGTTCCCAAAAAAGATAGGGTTTCCAAGCCGTTGGGTTCGAAAAAGAGCAAACAAGGGTCCAAAGGGAAAGATACGAAGCCGAGTGGTGGTGGGAAGCAATTAATTTTGAATGAAATGGACTTCATGAGTACACTATTAGCTTGTGATGAATATAGTGTGTCCAAAATGCCACCAACTGTAGCGGAGAATAGTGTTGATACTACGTTAAAGGAACCAAAAGGAAAAGTTGGCGGCAAAGATTCAGAGAGCGGATTTAGTGTGTTGGAAACCTCGGCTGCTCCTAATAAGAGTGAAGTGGGTGTGATGGATGTTGGGGATTTATGTATGTCTAGGTTGAAGATTGAAGAGAAAGAGGAATCCTTTGTTGGTAAGGCAGAGAAATCGAGTGAGGCTAGACTGAGGTCTTCTCTCAAACATTCAGGGACAAAGAAACTTAGTCGCTCTGTTACTTGGGCTGACGAAAAGATTGATAGTACCGGGAGGAGAAATCTTTGTGAGGTGAGAGACATGGAAGATGGAATTGAAAATCCTGGTGCATTTGGCAGCTTGCACAAACCTTCTACATCAAATGAAGCTGGTTCCTCTTTTAATTGGGTTGATAAGACGATTGATAGTACTAAGAGTGAAAATATTTGTGAGGTTAGAGAAATGCAAGATGCAAAAGATGTTCCTGAGGTATTAGGCAGTTCAGTCCTGCAAGATAATGAATGGTTTGAGTCGGCAGAAGCCTGTGCATCAGCATTGAGTCAGGCAGCCAGCGCTGTTGCAACTGGAGAATCTGATACTAATGATGCTGTGTCAAAAGCCGGGATTATTATATTGCCACATCCAGATGGTGTGGATGAAGAAGAGTCCATAGTGGATGATGTGTATGAAGAAGATTCCATAGAGGATAGTGTGGATGAAGAAGAGTCTACAGAGGATGTTGACATGCTTGAACCAGAACATGCTGTTTCAAAGTGGCCAGGAAAGCCCGAAAGTTCTCAGTTTGATTTATTTAACCCTGAGGATTCTTGGTTTGATGCTCCACCAGATGGTTTCAATTTAACTGTAAGAGTTATTTTTGTTTTTGGGAGGCGCACGGGAGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006355 GO:0006357 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008420 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019219 GO:0019222 GO:0019538 GO:0030154 GO:0031323 GO:0031326 GO:0032502 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070940 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RPAP2_Rtr1

Protein Analysis

542

Amino Acids

59.37

Weight (kDa)

4.77

Isoelectric Point (pI)

48.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPAP2_Rtr1	PF04181	40 - 115	8.5e-23	Rtr1/RPAP2 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006977)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G26760 AT5G26760
fragaria_vesca	FvH4_6g08180 FvH4_6g08180 FvH4_6g08180 FvH4_6g08180 FvH4_6g08180 FvH4_6g08180
malus_domestica	MD04G1189300.v1.1 MD12G1202100.v1.1
prunus_persica	Prupe.6G306900_v2.0.a1
pyrus_communis	pycom04g16770 pycom12g18860
rosa_chinensis	RchiOBHm_Chr3g0458051
rosa_laevigata	RLG00000025177
rosa_multiflora	Rmu_sc0000384.1_g000014
rosa_roxburghii	Rroxscaffold_6G00421320
rosa_rugosa	Rorug03G0024600 Rorug03G0024600
rosa_samantha	Rh3AG085100 Rh3BG087900 Rh3CG088400 Rh3DG088800
rosa_wichuraiana	Rw0G012430 Rw3G007250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	147
AccB7I	CCANNNNNTGG	1 cut(s)	1571
AccBSI	CCGCTC	2 cut(s)	129, 786
AccI	GTMKAC	1 cut(s)	1451
AciI	CCGC	6 cut(s)	127, 177, 226, 719, 768, 786
AclWI	GGATC	1 cut(s)	153
AcoI	YGGCCR	1 cut(s)	1499
AcyI	GRCGYC	2 cut(s)	81, 144
AdeI	CACNNNGTG	1 cut(s)	265
AfaI	GTAC	5 cut(s)	53, 269, 667, 1012, 1153
AfeI	AGCGCT	1 cut(s)	1297
AfiI	CCNNNNNNNGG	2 cut(s)	623, 1571
AjnI	CCWGG	2 cut(s)	1066, 1501
AjuI	GAANNNNNNNTTGG	2 cut(s)	885, 917
AluBI	AGCT	8 cut(s)	58, 64, 215, 289, 339, 677, 1083, 1112
AluI	AGCT	8 cut(s)	58, 64, 215, 289, 339, 677, 1083, 1112
Alw21I	GWGCWC	1 cut(s)	261
Alw26I	GTCTC	3 cut(s)	275, 473, 1035
AlwI	GGATC	1 cut(s)	153
Aor51HI	AGCGCT	1 cut(s)	1297
AoxI	GGCC	1 cut(s)	1499
ApeKI	GCWGC	3 cut(s)	812, 1080, 1289
AseI	ATTAAT	1 cut(s)	638
AspLEI	GCGC	2 cut(s)	1298, 1617
AspS9I	GGNCC	2 cut(s)	512, 594
AsuC2I	CCSGG	2 cut(s)	1015, 1345
AsuHPI	GGTGA	1 cut(s)	1048
AsuII	TTCGAA	1 cut(s)	575
AvaII	GGWCC	2 cut(s)	512, 594
AxyI	CCTNAGG	2 cut(s)	1209, 1542
BalI	TGGCCA	1 cut(s)	1501
BauI	CACGAG	1 cut(s)	11
BbsI	GAAGAC	1 cut(s)	933
Bbv12I	GWGCWC	1 cut(s)	261
BbvI	GCAGC	3 cut(s)	799, 1092, 1301
BccI	CCATC	6 cut(s)	34, 170, 835, 1046, 1364, 1565
BceAI	ACGGC	2 cut(s)	94, 550
BcgI	CGANNNNNNTGC	2 cut(s)	900, 934
BciT130I	CCWGG	2 cut(s)	1068, 1503
BcnI	CCSGG	2 cut(s)	1015, 1345
BcoDI	GTCTC	3 cut(s)	275, 473, 1035
BfaI	CTAG	3 cut(s)	92, 867, 930
BfmI	CTRYAG	2 cut(s)	714, 1452
BfoI	RGCGCY	1 cut(s)	1299
BisI	GCNGC	5 cut(s)	178, 769, 813, 1081, 1290
BlsI	GCNGC	5 cut(s)	179, 770, 814, 1082, 1291
BmcAI	AGTACT	1 cut(s)	1153
Bme1390I	CCNGG	4 cut(s)	1015, 1068, 1345, 1503
Bme18I	GGWCC	2 cut(s)	512, 594
BmgT120I	GGNCC	2 cut(s)	512, 594
BmiI	GGNNCC	4 cut(s)	115, 595, 750, 1117
BmrFI	CCNGG	4 cut(s)	1015, 1068, 1345, 1503
BmrI	ACTGGG	1 cut(s)	514
BmsI	GCATC	5 cut(s)	25, 1183, 1280, 1318, 1549
BmuI	ACTGGG	1 cut(s)	514
BoxI	GACNNNNGTC	1 cut(s)	937
BpiI	GAAGAC	1 cut(s)	933
BplI	GAGNNNNNCTC	2 cut(s)	928, 960
BpmI	CTGGAG	2 cut(s)	44, 1329
Bpu14I	TTCGAA	1 cut(s)	575
BpuEI	CTTGAG	2 cut(s)	236, 361
BpuMI	CCSGG	2 cut(s)	1015, 1345
Bsa29I	ATCGAT	1 cut(s)	315
BsaHI	GRCGYC	2 cut(s)	81, 144
BsaJI	CCNNGG	1 cut(s)	807
BsaXI	ACNNNNNCTCC	2 cut(s)	284, 314
Bsc4I	CCNNNNNNNGG	2 cut(s)	623, 1571
Bse118I	RCCGGY	1 cut(s)	110
Bse1I	ACTGG	2 cut(s)	509, 1312
Bse21I	CCTNAGG	2 cut(s)	1209, 1542
BseBI	CCWGG	2 cut(s)	1068, 1503
BseCI	ATCGAT	1 cut(s)	315
BseDI	CCNNGG	1 cut(s)	807
BseGI	GGATG	6 cut(s)	850, 1363, 1384, 1405, 1444, 1465
BseLI	CCNNNNNNNGG	2 cut(s)	623, 1571
BseMII	CTCAG	5 cut(s)	326, 926, 1200, 1533, 1535
BseNI	ACTGG	2 cut(s)	509, 1312
BseRI	GAGGAG	4 cut(s)	62, 289, 362, 1033
BseXI	GCAGC	3 cut(s)	799, 1092, 1301
BshFI	GGCC	1 cut(s)	1501
BshVI	ATCGAT	1 cut(s)	315
BsiHKAI	GWGCWC	1 cut(s)	261
BsiSI	CCGG	3 cut(s)	111, 1014, 1344
BslFI	GGGAC	1 cut(s)	973
BslI	CCNNNNNNNGG	2 cut(s)	623, 1571
BsmAI	GTCTC	3 cut(s)	275, 473, 1035
BsmBI	CGTCTC	1 cut(s)	275
BsmFI	GGGAC	1 cut(s)	973
BsnI	GGCC	1 cut(s)	1501
Bsp119I	TTCGAA	1 cut(s)	575
Bsp1286I	GDGCHC	1 cut(s)	261
Bsp1407I	TGTACA	1 cut(s)	51
Bsp143I	GATC	3 cut(s)	158, 271, 312
BspACI	CCGC	6 cut(s)	127, 177, 226, 719, 768, 786
BspANI	GGCC	1 cut(s)	1501
BspCNI	CTCAG	5 cut(s)	327, 927, 1201, 1534, 1534
BspDI	ATCGAT	1 cut(s)	315
BspHI	TCATGA	1 cut(s)	660
BspLI	GGNNCC	4 cut(s)	115, 595, 750, 1117
BspPI	GGATC	1 cut(s)	153
BspT104I	TTCGAA	1 cut(s)	575
BsrBI	CCGCTC	2 cut(s)	129, 786
BsrFI	RCCGGY	1 cut(s)	110
BsrGI	TGTACA	1 cut(s)	51
BsrI	ACTGG	2 cut(s)	509, 1312
BssAI	RCCGGY	1 cut(s)	110
BssECI	CCNNGG	1 cut(s)	807
BssMI	GATC	3 cut(s)	158, 271, 312
BssNI	GRCGYC	2 cut(s)	81, 144
BssSI	CACGAG	1 cut(s)	11
Bst2BI	CACGAG	1 cut(s)	11
Bst2UI	CCWGG	2 cut(s)	1068, 1503
Bst4CI	ACNGT	2 cut(s)	715, 1588
Bst6I	CTCTTC	3 cut(s)	876, 1380, 1440
BstACI	GRCGYC	2 cut(s)	81, 144
BstAUI	TGTACA	1 cut(s)	51
BstBI	TTCGAA	1 cut(s)	575
BstC8I	GCNNGC	4 cut(s)	66, 112, 1085, 1294
BstDEI	CTNAG	8 cut(s)	106, 335, 935, 971, 1155, 1209, 1521, 1542
BstF5I	GGATG	6 cut(s)	850, 1363, 1384, 1405, 1444, 1465
BstH2I	RGCGCY	1 cut(s)	1299
BstHHI	GCGC	2 cut(s)	1298, 1617
BstKTI	GATC	3 cut(s)	161, 274, 315
BstMAI	GTCTC	3 cut(s)	275, 473, 1035
BstMBI	GATC	3 cut(s)	158, 271, 312
BstMWI	GCNNNNNNNGC	3 cut(s)	256, 1295, 1507
BstNI	CCWGG	2 cut(s)	1068, 1503
BstNSI	RCATGY	2 cut(s)	1471, 1487
BstPAI	GACNNNNGTC	1 cut(s)	937
BstSCI	CCNGG	4 cut(s)	1013, 1066, 1343, 1501
BstSFI	CTRYAG	2 cut(s)	714, 1452
BstV1I	GCAGC	3 cut(s)	799, 1092, 1301
BstV2I	GAAGAC	1 cut(s)	933
BstXI	CCANNNNNNTGG	1 cut(s)	568
Bsu15I	ATCGAT	1 cut(s)	315
Bsu36I	CCTNAGG	2 cut(s)	1209, 1542
BsuRI	GGCC	1 cut(s)	1501
BsuTUI	ATCGAT	1 cut(s)	315
BtgZI	GCGATG	1 cut(s)	148
BtsCI	GGATG	6 cut(s)	850, 1363, 1384, 1405, 1444, 1465
BtsI	GCAGTG	1 cut(s)	54
BtsIMutI	CAGTG	2 cut(s)	42, 54
Cac8I	GCNNGC	4 cut(s)	66, 112, 1085, 1294
CciI	TCATGA	1 cut(s)	660
CfoI	GCGC	2 cut(s)	1298, 1617
Cfr10I	RCCGGY	1 cut(s)	110
Cfr13I	GGNCC	2 cut(s)	512, 594
ClaI	ATCGAT	1 cut(s)	315
CseI	GACGC	2 cut(s)	53, 70
Csp6I	GTAC	5 cut(s)	52, 268, 666, 1011, 1152
CviAII	CATG	4 cut(s)	661, 1045, 1468, 1484
CviQI	GTAC	5 cut(s)	52, 268, 666, 1011, 1152
DdeI	CTNAG	8 cut(s)	106, 335, 935, 971, 1155, 1209, 1521, 1542
DpnI	GATC	3 cut(s)	160, 273, 314
DpnII	GATC	3 cut(s)	158, 271, 312
DraIII	CACNNNGTG	1 cut(s)	265
EaeI	YGGCCR	1 cut(s)	1499
Eam1104I	CTCTTC	3 cut(s)	876, 1380, 1440
EarI	CTCTTC	3 cut(s)	876, 1380, 1440
Eco32I	GATATC	1 cut(s)	361
Eco47I	GGWCC	2 cut(s)	512, 594
Eco47III	AGCGCT	1 cut(s)	1297
Eco81I	CCTNAGG	2 cut(s)	1209, 1542
EcoRII	CCWGG	2 cut(s)	1066, 1501
EcoRV	GATATC	1 cut(s)	361
Esp3I	CGTCTC	1 cut(s)	275
FaeI	CATG	4 cut(s)	664, 1048, 1471, 1487
FaqI	GGGAC	1 cut(s)	973
FatI	CATG	4 cut(s)	660, 1044, 1467, 1483
FauI	CCCGC	2 cut(s)	134, 233
FblI	GTMKAC	1 cut(s)	1451
Fnu4HI	GCNGC	5 cut(s)	178, 769, 813, 1081, 1290
FokI	GGATG	6 cut(s)	857, 1350, 1391, 1412, 1451, 1472
Fsp4HI	GCNGC	5 cut(s)	178, 769, 813, 1081, 1290
FspBI	CTAG	3 cut(s)	92, 867, 930
GlaI	GCGC	2 cut(s)	1297, 1616
GluI	GCNGC	5 cut(s)	178, 769, 813, 1081, 1290
GsuI	CTGGAG	2 cut(s)	44, 1329
HaeII	RGCGCY	1 cut(s)	1299
HaeIII	GGCC	1 cut(s)	1501
HapII	CCGG	3 cut(s)	111, 1014, 1344
HgaI	GACGC	2 cut(s)	53, 70
HhaI	GCGC	2 cut(s)	1298, 1617
Hin1I	GRCGYC	2 cut(s)	81, 144
Hin1II	CATG	4 cut(s)	664, 1048, 1471, 1487
Hin6I	GCGC	2 cut(s)	1296, 1615
HinP1I	GCGC	2 cut(s)	1296, 1615
HincII	GTYRAC	1 cut(s)	1465
HindII	GTYRAC	1 cut(s)	1465
HindIII	AAGCTT	1 cut(s)	213
HpaII	CCGG	3 cut(s)	111, 1014, 1344
HphI	GGTGA	1 cut(s)	1048
Hpy166II	GTNNAC	6 cut(s)	40, 52, 268, 668, 1452, 1465
Hpy188I	TCNGA	8 cut(s)	21, 133, 211, 278, 336, 374, 781, 1318
Hpy188III	TCNNGA	4 cut(s)	382, 661, 1208, 1367
Hpy8I	GTNNAC	6 cut(s)	40, 52, 268, 668, 1452, 1465
Hpy99I	CGWCG	4 cut(s)	47, 80, 146, 149
HpyAV	CCTTC	5 cut(s)	216, 421, 524, 525, 1104
HpyCH4III	ACNGT	2 cut(s)	715, 1588
HpyCH4IV	ACGT	2 cut(s)	144, 740
HpyCH4V	TGCA	7 cut(s)	1073, 1087, 1189, 1196, 1234, 1271, 1304
HpyF10VI	GCNNNNNNNGC	3 cut(s)	256, 1295, 1507
HpyF3I	CTNAG	8 cut(s)	106, 335, 935, 971, 1155, 1209, 1521, 1542
HpySE526I	ACGT	2 cut(s)	144, 740
Hsp92I	GRCGYC	2 cut(s)	81, 144
Hsp92II	CATG	4 cut(s)	664, 1048, 1471, 1487
HspAI	GCGC	2 cut(s)	1296, 1615
KroI	GCCGGC	1 cut(s)	110
KroNI	GCCGGC	1 cut(s)	112
Kzo9I	GATC	3 cut(s)	158, 271, 312
LmnI	GCTCC	9 cut(s)	63, 119, 134, 154, 197, 256, 302, 820, 1567
Lsp1109I	GCAGC	3 cut(s)	799, 1092, 1301
LweI	GCATC	5 cut(s)	25, 1183, 1280, 1318, 1549
MaeI	CTAG	3 cut(s)	92, 867, 930
MaeII	ACGT	2 cut(s)	144, 740
MaeIII	GTNAC	3 cut(s)	148, 233, 982
MalI	GATC	3 cut(s)	160, 273, 314
MbiI	CCGCTC	2 cut(s)	129, 786
MboI	GATC	3 cut(s)	158, 271, 312
MhlI	GDGCHC	1 cut(s)	261
MlsI	TGGCCA	1 cut(s)	1501
MluCI	AATT	7 cut(s)	398, 494, 635, 639, 1056, 1126, 1579
MluNI	TGGCCA	1 cut(s)	1501
MlyI	GAGTC	4 cut(s)	1262, 1291, 1397, 1457
MmeI	TCCRAC	2 cut(s)	156, 780
Mox20I	TGGCCA	1 cut(s)	1501
MroNI	GCCGGC	1 cut(s)	110
MscI	TGGCCA	1 cut(s)	1501
MseI	TTAA	6 cut(s)	638, 743, 1125, 1536, 1583, 1627
MslI	CAYNNNNRTG	1 cut(s)	1368
Msp20I	TGGCCA	1 cut(s)	1501
MspA1I	CMGCKG	1 cut(s)	64
MspI	CCGG	3 cut(s)	111, 1014, 1344
MspR9I	CCNGG	4 cut(s)	1015, 1068, 1345, 1503
MvaI	CCWGG	2 cut(s)	1068, 1503
MwoI	GCNNNNNNNGC	3 cut(s)	256, 1295, 1507
NaeI	GCCGGC	1 cut(s)	112
NciI	CCSGG	2 cut(s)	1015, 1345
NdeII	GATC	3 cut(s)	158, 271, 312
NgoMIV	GCCGGC	1 cut(s)	110
NlaIII	CATG	4 cut(s)	664, 1048, 1471, 1487
NlaIV	GGNNCC	4 cut(s)	115, 595, 750, 1117
NmeAIII	GCCGAG	2 cut(s)	642, 788
NmuCI	GTSAC	2 cut(s)	148, 233
NspI	RCATGY	2 cut(s)	1471, 1487
NspV	TTCGAA	1 cut(s)	575
PagI	TCATGA	1 cut(s)	660
PcsI	WCGNNNNNNNCGW	1 cut(s)	378
PdiI	GCCGGC	1 cut(s)	112
PfeI	GAWTC	6 cut(s)	22, 776, 893, 1313, 1418, 1547
PflFI	GACNNNGTC	2 cut(s)	80, 146
PflMI	CCANNNNNTGG	1 cut(s)	1571
PkrI	GCNGC	5 cut(s)	179, 770, 814, 1082, 1291
PleI	GAGTC	4 cut(s)	1261, 1290, 1396, 1456
PpsI	GAGTC	4 cut(s)	1261, 1290, 1396, 1456
PshAI	GACNNNNGTC	1 cut(s)	937
PshBI	ATTAAT	1 cut(s)	638
Psp6I	CCWGG	2 cut(s)	1066, 1501
PspGI	CCWGG	2 cut(s)	1066, 1501
PspN4I	GGNNCC	4 cut(s)	115, 595, 750, 1117
PspPI	GGNCC	2 cut(s)	512, 594
PsyI	GACNNNGTC	2 cut(s)	80, 146
PvuII	CAGCTG	1 cut(s)	64
RsaI	GTAC	5 cut(s)	53, 269, 667, 1012, 1153
RsaNI	GTAC	5 cut(s)	52, 268, 666, 1011, 1152
RseI	CAYNNNNRTG	1 cut(s)	1368
SaqAI	TTAA	6 cut(s)	638, 743, 1125, 1536, 1583, 1627
SatI	GCNGC	5 cut(s)	178, 769, 813, 1081, 1290
Sau3AI	GATC	3 cut(s)	158, 271, 312
Sau96I	GGNCC	2 cut(s)	512, 594
ScaI	AGTACT	1 cut(s)	1153
SchI	GAGTC	4 cut(s)	1262, 1291, 1397, 1457
ScrFI	CCNGG	4 cut(s)	1015, 1068, 1345, 1503
SduI	GDGCHC	1 cut(s)	261
SfaNI	GCATC	5 cut(s)	25, 1183, 1280, 1318, 1549
SfcI	CTRYAG	2 cut(s)	714, 1452
SfuI	TTCGAA	1 cut(s)	575
SinI	GGWCC	2 cut(s)	512, 594
SmiMI	CAYNNNNRTG	1 cut(s)	1368
SmlI	CTYRAG	2 cut(s)	251, 340
SmoI	CTYRAG	2 cut(s)	251, 340
Sse9I	AATT	7 cut(s)	398, 494, 635, 639, 1056, 1126, 1579
SsiI	CCGC	6 cut(s)	127, 177, 226, 719, 768, 786
SspI	AATATT	1 cut(s)	1168
SspMI	CTAG	3 cut(s)	92, 867, 930
StyD4I	CCNGG	4 cut(s)	1013, 1066, 1343, 1501
TaaI	ACNGT	2 cut(s)	715, 1588
TaiI	ACGT	2 cut(s)	147, 743
TaqI	TCGA	6 cut(s)	29, 75, 315, 381, 575, 920
TasI	AATT	7 cut(s)	398, 494, 635, 639, 1056, 1126, 1579
TatI	WGTACW	3 cut(s)	51, 665, 1151
TauI	GCSGC	2 cut(s)	180, 771
TfiI	GAWTC	6 cut(s)	22, 776, 893, 1313, 1418, 1547
Tru1I	TTAA	6 cut(s)	638, 743, 1125, 1536, 1583, 1627
Tru9I	TTAA	6 cut(s)	638, 743, 1125, 1536, 1583, 1627
TscAI	CASTG	2 cut(s)	42, 54
TseFI	GTSAC	2 cut(s)	148, 233
TseI	GCWGC	3 cut(s)	812, 1080, 1289
Tsp45I	GTSAC	2 cut(s)	148, 233
TspDTI	ATGAA	9 cut(s)	429, 649, 663, 699, 1122, 1257, 1395, 1425, 1455
TspGWI	ACGGA	1 cut(s)	167
TspRI	CASTG	2 cut(s)	42, 54
Tth111I	GACNNNGTC	2 cut(s)	80, 146
Van91I	CCANNNNNTGG	1 cut(s)	1571
VpaK11BI	GGWCC	2 cut(s)	512, 594
VspI	ATTAAT	1 cut(s)	638
XceI	RCATGY	2 cut(s)	1471, 1487
XmiI	GTMKAC	1 cut(s)	1451
XspI	CTAG	3 cut(s)	92, 867, 930
ZraI	GACGTC	1 cut(s)	145
ZrmI	AGTACT	1 cut(s)	1153

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.