Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0003096

Physical Location & Seq

Genomic Coordinates Forward (+)

5315667 .. 5322001

Gene Structure 6335 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g09020.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2859 bp

ATGGTAACCATGAGGTTGCTGCTGTTTCTGGCTTTGTGCTCAGGGATTCAAGTGGTGTTCTCCGATGACGCTGCTGCACTTGAATCCTTAAAGGCTTCGTGGCAAAATTATCCACCCAGCTGGGACCAGTCAAGTGATTACTGTGTGTGGGATGGAATAACCTGCAATCAGGAATCCAGTGTGACTGCAATGAAATTATCACTCATGGGCCTGGTAGGGGATCTTAGTAGCGACCTTGGGGGACTCACTGAACTAACAGCCTTGGACCTTTCATTCAACCCTGGCCTTACTGGTACTCTCTCTCCAGAATTAGGGAAGCTGAAAAAATTAAATATTCTGATCCTAGCTGGCTGCAAATTCACTGGCAGTATTCCCGATGCATTGGGCAATCTTGGAGAACTAACCTTCTTGGCTCTGAATACAAATAGTTTTACTGGTAAGATACCTGCTTCTTTGGGTAATCTCTCCAAACTCTACTGGCTGGACCTTGCAGAAAATCAGTTGACTGGATCCATCCCAGTTTCAACTGCAACATCGCCAGGCTTGGACCAACTAGTGACTGCTAAACATTTCCATTTCAACAAGAATCAGCTTTCAGGTTCAATTCCAGCCAAACTATTCAGCGCTAATATGAGCCTGATACATGTGTTGTTTGATGGAAACAAATTGAGTGGGCCTATTCCATCAACAATAGGACAACTTCAGTTTCTTGAGGCTCTTCGGCTTGATAGAAATGCTCTGACGGGAACAGTCCCTGCAAATATTAGCAACCTTTCAAATGTCAATGAATTAAATTTGGCCTTCAACAATTTGACAGGCCCTTTGCCCGACTTGACTGGAATGAACTCCCTGAATTATGTGGACCTTAGTAACAACTCATTTAACCAATCAGAAGCACCAAGTTGGTTCTCAGCTTTACCTGCACTCACCACTCTGGTTATAGAATATGGACCACTTCAAGGTACTGTGCCAGAGAAGCTTTTCAGCTTACAAAATATACAGACAGTGAAACTGAAAAATAATGCATTTAACAACACATTGAACTTGGGTGATAGCATCAGTGCACAACTAGACCTTGTTGATCTGGAGAACAATGATATATCCCTTGTCACTATGGGTTATGAGTACAAAAATTCCCTAATACTTGTAGGGAACCCTGTGTGCAACAGAACCACTGGGCTATCATATTGTACGATTCTGCAACCTACAGTATATTCTACTACAGTGAATTGTGGAAATGCTAAATGCCCCGAGGATCAGAAGCTCAGCCCTCAGAGTTGTCAGTGTGCATATCCGTTTGAAGGAACACTGTATTTTAGAGCACCAACTTTCAGGGAATTATCAGATGCAACTAAGTTTCACTCCCTAGAAATGAGCCTGTGGTCGAAACTTGCCCTCAATCCTGGTTCAGTTGATCTACAGAACCCTTTCTTCAACGTTGATGACTATCTTCAAGTACAGTTGGCACTCTTTCCATCTACAGGAACCCATTTTAATAGATCAGAGGTTCTGAGGATTGGTTTTGATCTGACCAATCAAACTTACAAGCCGCCTGTGGAGTTTGGTCCCTATTTATTTCTTGCAGCTCCTTATACTTTCCGGGCCGCGCATGGGAAATCTGTAAGCACTGGTGTTGTCATTGGGATAGCAATTGGTTGTACCTTACTGGTTGTGGGCTTAGTGGCAGTCGGAATATATGCCATTCGGCAAAAGAAACGTGCAGAAAAAGCCATTGGATTAAGCAGACCATTTGCTTCTTGGGCACCCAGTGGAAAAGATAGTGGAGGTGCACCACAATTAAAGGGAGCAAGATGGTTTTCTTATGAGGAGCTTAAGAAGTGCACCAATAATTTTTCTGACAGTAATGAGATAGGATCTGGCGGCTACGGCAAGGTTTACAGGGGCATGTTTGGTGATGGACTAGTAGTGGCAATCAAAAGAGCTCAGCAAGGATCAATGCAGGGTGGTCTTGAGTTCAAGACTGAAATTGAGTTGCTCTCACGAGTTCATCACAAAAATCTTGTTGGTCTCGTTGGGTTTTGTTTTGAACAAGGAGAACAGATGCTGGTTTACGAATATATGCCTAACGGAACACTTAGGGAAAGTTTGTCAGGGAGATCTGGAATTCATCTTGACTGGAAAAGAAGACTCCGAATCACTCTTGGCTCAGCAAGAGGGCTCGCTTACCTACATGAGCTTGCAAACCCTCCTATAATTCATAGAGATATCAAGACCACCAATATTCTATTGGATGAAAATTTAACAGCAAAGGTTGCAGATTTTGGCTTGTCCAAGCTGGTTTCTGACAGTGCAAAAGGGCATGTATCAACTCAGGTCAAAGGCACACTGGGATATCTGGATCCTGAATACTACATGACTCAACAGTTAACTGAGAAGAGTGATGTATACAGTTTCGGAGTGGTTATGCTTGAATTGATAACTGCAAAGCAACCGATTGAGAAGGGAAAATACATTGTCCGTGAGGTACGCATGGCAATGAACAAGGATGATGAAGAGCACTATGGGTTGAGGGAGTTAATAGACCGAAACATTAGAAACTCAGGACCACTTATAGGGTTCGCAAGGTTCTTGGAGTTGGCCATGCAATGTGTCGAAGAATCAGCTGCAGATCGTCCAACAATGAGTGATCTTGTGAAAGCTGTTGAAACCATTCTACAGAATGATGGCATAAATACAAACTCAACATCAGCCTCTTCATCTGCCACAGACTTCAATTCTTCAAAAAGTGCTAAACATCCATACAACGACGGTTTGCCAAAGAAGGAAATGAGGGACAGTACTGACGCCTTTGAATACAGTGGCGGATACGCAGTTTCTGCGAAAATCGAACCAAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

953

Amino Acids

103.85

Weight (kDa)

5.88

Isoelectric Point (pI)

35.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	21 - 56	9.1e-07	Leucine rich repeat N-terminal domain
Pkinase	PF00069	619 - 886	1.9e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	622 - 886	5e-49	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003096)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G79620 AT1G79620 AT1G79620 AT1G79620 AT1G79620
fragaria_vesca	FvH4_6g09020 FvH4_6g09020
malus_domestica	MD04G1181800.v1.1 MD04G1182200.v1.1 MD04G1183000.v1.1 MD04G1183100.v1.1 MD12G1196600.v1.1
prunus_persica	Prupe.6G301100_v2.0.a1 Prupe.6G301100_v2.0.a1 Prupe.6G301200_v2.0.a1 Prupe.6G301500_v2.0.a1 Prupe.6G301500_v2.0.a1 Prupe.6G301600_v2.0.a1 Prupe.6G301600_v2.0.a1 Prupe.6G301600_v2.0.a1 Prupe.6G301600_v2.0.a1
pyrus_communis	pycom04g16070 pycom04g16150 pycom04g16170 pycom12g18280
rosa_chinensis	RchiOBHm_Chr3g0459271
rosa_laevigata	RLG00000025098
rosa_multiflora	Rmu_sc0006220.1_g000001 Rmu_sc0010702.1_g000001
rosa_roxburghii	Rroxscaffold_6G00420350
rosa_rugosa	Rorug03G0034900 Rorug03G0035000
rosa_samantha	Rh3AG092700 Rh3BG095800 Rh3CG096800 Rh3DG096400
rosa_wichuraiana	Rw3G007970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	170, 454, 928
AccB1I	GGYRCC	1 cut(s)	1762
AccI	GTMKAC	1 cut(s)	2406
AccII	CGCG	1 cut(s)	1607
AciI	CCGC	4 cut(s)	1550, 1605, 1881, 2823
AclI	AACGTT	1 cut(s)	1437
AclWI	GGATC	9 cut(s)	228, 334, 504, 517, 1263, 1882, 1960, 2354, 2367
AcoI	YGGCCR	1 cut(s)	2598
AcsI	RAATTY	5 cut(s)	356, 793, 1132, 2124, 2257
AcuI	CTGAAG	1 cut(s)	686
AcyI	GRCGYC	1 cut(s)	2805
AdeI	CACNNNGTG	1 cut(s)	1769
AfaI	GTAC	8 cut(s)	295, 964, 1127, 1192, 1458, 1660, 2487, 2800
AfeI	AGCGCT	1 cut(s)	625
AfiI	CCNNNNNNNGG	7 cut(s)	217, 311, 959, 1301, 1481, 1611, 2573
AflII	CTTAAG	1 cut(s)	1832
AflIII	ACRYGT	1 cut(s)	643
AhlI	ACTAGT	2 cut(s)	553, 1921
AjnI	CCWGG	4 cut(s)	210, 280, 538, 1402
AjuI	GAANNNNNNNTTGG	2 cut(s)	1716, 1748
Alw21I	GWGCWC	7 cut(s)	41, 1066, 1324, 1792, 1844, 1945, 2520
Alw26I	GTCTC	1 cut(s)	2033
Alw44I	GTGCAC	3 cut(s)	1062, 1788, 1840
AlwI	GGATC	9 cut(s)	228, 334, 504, 517, 1263, 1882, 1960, 2354, 2367
AlwNI	CAGNNNCTG	3 cut(s)	755, 2065, 2837
Ama87I	CYCGRG	1 cut(s)	1250
Aor51HI	AGCGCT	1 cut(s)	625
AoxI	GGCC	7 cut(s)	208, 283, 674, 798, 817, 1602, 2598
ApaLI	GTGCAC	3 cut(s)	1062, 1788, 1840
ApeKI	GCWGC	6 cut(s)	19, 71, 74, 351, 1583, 2624
ApoI	RAATTY	5 cut(s)	356, 793, 1132, 2124, 2257
ArsI	GACNNNNNNTTYG	2 cut(s)	805, 837
Asp700I	GAANNNNTTC	3 cut(s)	980, 1427, 2670
AspLEI	GCGC	2 cut(s)	626, 1609
AsuC2I	CCSGG	1 cut(s)	1601
AsuHPI	GGTGA	3 cut(s)	919, 1061, 1925
AvaI	CYCGRG	1 cut(s)	1250
AvaII	GGWCC	8 cut(s)	124, 265, 484, 547, 862, 950, 1565, 2564
BaeGI	GKGCMC	4 cut(s)	1066, 1765, 1792, 1844
BaeI	ACNNNNGTAYC	2 cut(s)	632, 665
BalI	TGGCCA	1 cut(s)	2600
BamHI	GGATCC	2 cut(s)	509, 2359
BanI	GGYRCC	1 cut(s)	1762
BanII	GRGCYC	2 cut(s)	1945, 2181
BarI	GAAGNNNNNNTAC	2 cut(s)	2453, 2485
BauI	CACGAG	1 cut(s)	2001
BbsI	GAAGAC	1 cut(s)	2152
Bbv12I	GWGCWC	7 cut(s)	41, 1066, 1324, 1792, 1844, 1945, 2520
BbvI	GCAGC	6 cut(s)	6, 58, 61, 338, 1595, 2611
BccI	CCATC	8 cut(s)	146, 521, 650, 691, 1483, 1806, 1910, 2678
BceAI	ACGGC	1 cut(s)	1903
BcgI	CGANNNNNNTGC	2 cut(s)	53, 87
BciT130I	CCWGG	4 cut(s)	212, 282, 540, 1404
BciVI	GTATCC	1 cut(s)	2819
BcnI	CCSGG	1 cut(s)	1601
BcoDI	GTCTC	1 cut(s)	2033
BcuI	ACTAGT	2 cut(s)	553, 1921
BfaI	CTAG	5 cut(s)	344, 554, 1070, 1367, 1922
BfmI	CTRYAG	6 cut(s)	1206, 1221, 1418, 1479, 2625, 2675
BfoI	RGCGCY	1 cut(s)	627
BfrI	CTTAAG	1 cut(s)	1832
BfuAI	ACCTGC	3 cut(s)	170, 454, 928
BfuI	GTATCC	1 cut(s)	2819
BglII	AGATCT	1 cut(s)	2117
BisI	GCNGC	9 cut(s)	20, 72, 75, 352, 1550, 1584, 1605, 1882, 2625
BlpI	GCTNAGC	3 cut(s)	1265, 1944, 2167
BlsI	GCNGC	9 cut(s)	21, 73, 76, 353, 1551, 1585, 1606, 1883, 2626
BmcAI	AGTACT	1 cut(s)	2800
Bme1390I	CCNGG	5 cut(s)	212, 282, 540, 1404, 1601
Bme18I	GGWCC	8 cut(s)	124, 265, 484, 547, 862, 950, 1565, 2564
BmeT110I	CYCGRG	1 cut(s)	1250
BmiI	GGNNCC	7 cut(s)	125, 511, 1154, 1486, 1567, 1764, 2361
BmrFI	CCNGG	5 cut(s)	212, 282, 540, 1404, 1601
BmrI	ACTGGG	4 cut(s)	512, 1185, 1761, 2357
BmsI	GCATC	4 cut(s)	367, 1065, 1336, 2052
BmuI	ACTGGG	4 cut(s)	512, 1185, 1761, 2357
BpiI	GAAGAC	1 cut(s)	2152
BplI	GAGNNNNNCTC	2 cut(s)	1982, 2014
BpmI	CTGGAG	2 cut(s)	288, 1106
Bpu10I	CCTNAGC	1 cut(s)	40
Bpu1102I	GCTNAGC	3 cut(s)	1265, 1944, 2167
BpuEI	CTTGAG	2 cut(s)	731, 1991
BpuMI	CCSGG	1 cut(s)	1601
BsaBI	GATNNNNATC	1 cut(s)	1446
BsaHI	GRCGYC	1 cut(s)	2805
BsaI	GGTCTC	1 cut(s)	2033
BsaJI	CCNNGG	4 cut(s)	235, 261, 280, 1251
BsaXI	ACNNNNNCTCC	2 cut(s)	286, 316
Bsc4I	CCNNNNNNNGG	7 cut(s)	217, 311, 959, 1301, 1481, 1611, 2573
Bse3DI	GCAATG	3 cut(s)	195, 2502, 2612
Bse8I	GATNNNNATC	1 cut(s)	1446
BseBI	CCWGG	4 cut(s)	212, 282, 540, 1404
BseDI	CCNNGG	4 cut(s)	235, 261, 280, 1251
BseGI	GGATG	5 cut(s)	157, 513, 2257, 2512, 2755
BseJI	GATNNNNATC	1 cut(s)	1446
BseLI	CCNNNNNNNGG	7 cut(s)	217, 311, 959, 1301, 1481, 1611, 2573
BseMI	GCAATG	3 cut(s)	195, 2502, 2612
BseRI	GAGGAG	1 cut(s)	1841
BseSI	GKGCMC	4 cut(s)	1066, 1765, 1792, 1844
BseXI	GCAGC	6 cut(s)	6, 58, 61, 338, 1595, 2611
BseYI	CCCAGC	2 cut(s)	116, 120
BsgI	GTGCAG	3 cut(s)	60, 906, 1740
Bsh1236I	CGCG	1 cut(s)	1607
BshFI	GGCC	7 cut(s)	210, 285, 676, 800, 819, 1604, 2600
BshNI	GGYRCC	1 cut(s)	1762
BsiHKAI	GWGCWC	7 cut(s)	41, 1066, 1324, 1792, 1844, 1945, 2520
BsiHKCI	CYCGRG	1 cut(s)	1250
BsiSI	CCGG	1 cut(s)	1600
BslFI	GGGAC	5 cut(s)	137, 255, 737, 1551, 2807
BslI	CCNNNNNNNGG	7 cut(s)	217, 311, 959, 1301, 1481, 1611, 2573
BsmAI	GTCTC	1 cut(s)	2033
BsmFI	GGGAC	5 cut(s)	137, 255, 737, 1551, 2807
BsnI	GGCC	7 cut(s)	210, 285, 676, 800, 819, 1604, 2600
Bso31I	GGTCTC	1 cut(s)	2033
BsoBI	CYCGRG	1 cut(s)	1250
Bsp1286I	GDGCHC	9 cut(s)	41, 1066, 1324, 1765, 1792, 1844, 1945, 2181, 2520
Bsp1720I	GCTNAGC	3 cut(s)	1265, 1944, 2167
BspACI	CCGC	4 cut(s)	1550, 1605, 1881, 2823
BspANI	GGCC	7 cut(s)	210, 285, 676, 800, 819, 1604, 2600
BspFNI	CGCG	1 cut(s)	1607
BspLI	GGNNCC	7 cut(s)	125, 511, 1154, 1486, 1567, 1764, 2361
BspMAI	CTGCAG	1 cut(s)	2629
BspMI	ACCTGC	3 cut(s)	170, 454, 928
BspPI	GGATC	9 cut(s)	228, 334, 504, 517, 1263, 1882, 1960, 2354, 2367
BspQI	GCTCTTC	2 cut(s)	723, 2508
BspT107I	GGYRCC	1 cut(s)	1762
BspTI	CTTAAG	1 cut(s)	1832
BspTNI	GGTCTC	1 cut(s)	2033
BsrDI	GCAATG	3 cut(s)	195, 2502, 2612
BssECI	CCNNGG	4 cut(s)	235, 261, 280, 1251
BssNAI	GTATAC	1 cut(s)	2407
BssNI	GRCGYC	1 cut(s)	2805
BssSI	CACGAG	1 cut(s)	2001
BssT1I	CCWWGG	2 cut(s)	235, 261
Bst1107I	GTATAC	1 cut(s)	2407
Bst2BI	CACGAG	1 cut(s)	2001
Bst2UI	CCWGG	4 cut(s)	212, 282, 540, 1404
Bst6I	CTCTTC	4 cut(s)	723, 2390, 2508, 2719
BstACI	GRCGYC	1 cut(s)	2805
BstAFI	CTTAAG	1 cut(s)	1832
BstAPI	GCANNNNNTGC	2 cut(s)	2273, 2837
BstC8I	GCNNGC	3 cut(s)	349, 2181, 2199
BstEII	GGTNACC	1 cut(s)	4
BstF5I	GGATG	5 cut(s)	157, 513, 2257, 2512, 2755
BstFNI	CGCG	1 cut(s)	1607
BstH2I	RGCGCY	1 cut(s)	627
BstHHI	GCGC	2 cut(s)	626, 1609
BstMAI	GTCTC	1 cut(s)	2033
BstMWI	GCNNNNNNNGC	7 cut(s)	920, 976, 1727, 1760, 1887, 2273, 2837
BstNI	CCWGG	4 cut(s)	212, 282, 540, 1404
BstNSI	RCATGY	3 cut(s)	647, 1909, 2324
BstPI	GGTNACC	1 cut(s)	4
BstSCI	CCNGG	5 cut(s)	210, 280, 538, 1402, 1599
BstSFI	CTRYAG	6 cut(s)	1206, 1221, 1418, 1479, 2625, 2675
BstSLI	GKGCMC	4 cut(s)	1066, 1765, 1792, 1844
BstUI	CGCG	1 cut(s)	1607
BstV1I	GCAGC	6 cut(s)	6, 58, 61, 338, 1595, 2611
BstV2I	GAAGAC	1 cut(s)	2152
BstX2I	RGATCY	5 cut(s)	220, 509, 1874, 2117, 2359
BstXI	CCANNNNNNTGG	1 cut(s)	120
BstYI	RGATCY	5 cut(s)	220, 509, 1874, 2117, 2359
BstZ17I	GTATAC	1 cut(s)	2407
BsuI	GTATCC	1 cut(s)	2819
BsuRI	GGCC	7 cut(s)	210, 285, 676, 800, 819, 1604, 2600
BtgZI	GCGATG	1 cut(s)	519
BtsCI	GGATG	5 cut(s)	157, 513, 2257, 2512, 2755
BveI	ACCTGC	3 cut(s)	170, 454, 928
Cac8I	GCNNGC	3 cut(s)	349, 2181, 2199
CaiI	CAGNNNCTG	3 cut(s)	755, 2065, 2837
CfoI	GCGC	2 cut(s)	626, 1609
CseI	GACGC	2 cut(s)	77, 2813
Csp6I	GTAC	8 cut(s)	294, 963, 1126, 1191, 1457, 1659, 2486, 2799
CspCI	CAANNNNNGTGG	2 cut(s)	652, 687
CviQI	GTAC	8 cut(s)	294, 963, 1126, 1191, 1457, 1659, 2486, 2799
DraIII	CACNNNGTG	1 cut(s)	1769
EaeI	YGGCCR	1 cut(s)	2598
Eam1104I	CTCTTC	4 cut(s)	723, 2390, 2508, 2719
EarI	CTCTTC	4 cut(s)	723, 2390, 2508, 2719
EciI	GGCGGA	1 cut(s)	2838
Ecl136II	GAGCTC	1 cut(s)	1943
Eco130I	CCWWGG	2 cut(s)	235, 261
Eco24I	GRGCYC	2 cut(s)	1945, 2181
Eco31I	GGTCTC	1 cut(s)	2033
Eco32I	GATATC	2 cut(s)	2227, 2354
Eco47I	GGWCC	8 cut(s)	124, 265, 484, 547, 862, 950, 1565, 2564
Eco47III	AGCGCT	1 cut(s)	625
Eco53kI	GAGCTC	1 cut(s)	1943
Eco57I	CTGAAG	1 cut(s)	686
Eco88I	CYCGRG	1 cut(s)	1250
Eco91I	GGTNACC	1 cut(s)	4
EcoICRI	GAGCTC	1 cut(s)	1943
EcoO109I	RGGNCCY	1 cut(s)	818
EcoO65I	GGTNACC	1 cut(s)	4
EcoRI	GAATTC	1 cut(s)	2124
EcoRII	CCWGG	4 cut(s)	210, 280, 538, 1402
EcoRV	GATATC	2 cut(s)	2227, 2354
EcoT14I	CCWWGG	2 cut(s)	235, 261
EcoT22I	ATGCAT	2 cut(s)	382, 1027
EcoT38I	GRGCYC	2 cut(s)	1945, 2181
ErhI	CCWWGG	2 cut(s)	235, 261
FaqI	GGGAC	5 cut(s)	137, 255, 737, 1551, 2807
FblI	GTMKAC	1 cut(s)	2406
Fnu4HI	GCNGC	9 cut(s)	20, 72, 75, 352, 1550, 1584, 1605, 1882, 2625
FokI	GGATG	5 cut(s)	164, 500, 2264, 2519, 2742
FriOI	GRGCYC	2 cut(s)	1945, 2181
Fsp4HI	GCNGC	9 cut(s)	20, 72, 75, 352, 1550, 1584, 1605, 1882, 2625
FspBI	CTAG	5 cut(s)	344, 554, 1070, 1367, 1922
GlaI	GCGC	2 cut(s)	625, 1608
GluI	GCNGC	9 cut(s)	20, 72, 75, 352, 1550, 1584, 1605, 1882, 2625
GsaI	CCCAGC	2 cut(s)	120, 124
GsuI	CTGGAG	2 cut(s)	288, 1106
HaeII	RGCGCY	1 cut(s)	627
HaeIII	GGCC	7 cut(s)	210, 285, 676, 800, 819, 1604, 2600
HapII	CCGG	1 cut(s)	1600
HgaI	GACGC	2 cut(s)	77, 2813
HhaI	GCGC	2 cut(s)	626, 1609
Hin1I	GRCGYC	1 cut(s)	2805
Hin6I	GCGC	2 cut(s)	624, 1607
HinP1I	GCGC	2 cut(s)	624, 1607
HincII	GTYRAC	2 cut(s)	504, 2388
HindII	GTYRAC	2 cut(s)	504, 2388
HindIII	AAGCTT	1 cut(s)	977
HpaI	GTTAAC	1 cut(s)	2388
HpaII	CCGG	1 cut(s)	1600
HphI	GGTGA	3 cut(s)	919, 1061, 1925
Hpy166II	GTNNAC	9 cut(s)	504, 862, 1064, 1790, 1842, 1897, 2071, 2388, 2407
Hpy8I	GTNNAC	9 cut(s)	504, 862, 1064, 1790, 1842, 1897, 2071, 2388, 2407
Hpy99I	CGWCG	1 cut(s)	2771
HpyAV	CCTTC	5 cut(s)	415, 811, 1295, 2455, 2776
HpyCH4IV	ACGT	2 cut(s)	1437, 1717
HpyF10VI	GCNNNNNNNGC	7 cut(s)	920, 976, 1727, 1760, 1887, 2273, 2837
HpySE526I	ACGT	2 cut(s)	1437, 1717
Hsp92I	GRCGYC	1 cut(s)	2805
HspAI	GCGC	2 cut(s)	624, 1607
KspAI	GTTAAC	1 cut(s)	2388
LguI	GCTCTTC	2 cut(s)	723, 2508
LmnI	GCTCC	3 cut(s)	1591, 1805, 1828
Lsp1109I	GCAGC	6 cut(s)	6, 58, 61, 338, 1595, 2611
LweI	GCATC	4 cut(s)	367, 1065, 1336, 2052
MaeI	CTAG	5 cut(s)	344, 554, 1070, 1367, 1922
MaeII	ACGT	2 cut(s)	1437, 1717
MaeIII	GTNAC	5 cut(s)	4, 181, 556, 869, 1108
MboII	GAAGA	9 cut(s)	710, 1423, 1442, 2157, 2407, 2525, 2627, 2706, 2730
MfeI	CAATTG	1 cut(s)	1650
MflI	RGATCY	5 cut(s)	220, 509, 1874, 2117, 2359
MhlI	GDGCHC	9 cut(s)	41, 1066, 1324, 1765, 1792, 1844, 1945, 2181, 2520
MlsI	TGGCCA	1 cut(s)	2600
MluNI	TGGCCA	1 cut(s)	2600
MlyI	GAGTC	3 cut(s)	237, 2142, 2371
MmeI	TCCRAC	2 cut(s)	1669, 2660
Mox20I	TGGCCA	1 cut(s)	2600
Mph1103I	ATGCAT	2 cut(s)	382, 1027
MroXI	GAANNNNTTC	3 cut(s)	980, 1427, 2670
MscI	TGGCCA	1 cut(s)	2600
MslI	CAYNNNNRTG	1 cut(s)	2495
Msp20I	TGGCCA	1 cut(s)	2600
MspA1I	CMGCKG	2 cut(s)	120, 2624
MspCI	CTTAAG	1 cut(s)	1832
MspI	CCGG	1 cut(s)	1600
MspR9I	CCNGG	5 cut(s)	212, 282, 540, 1404, 1601
MunI	CAATTG	1 cut(s)	1650
MvaI	CCWGG	4 cut(s)	212, 282, 540, 1404
MvnI	CGCG	1 cut(s)	1607
MwoI	GCNNNNNNNGC	7 cut(s)	920, 976, 1727, 1760, 1887, 2273, 2837
NciI	CCSGG	1 cut(s)	1601
NlaIV	GGNNCC	7 cut(s)	125, 511, 1154, 1486, 1567, 1764, 2361
NmuCI	GTSAC	3 cut(s)	181, 556, 1108
NsiI	ATGCAT	2 cut(s)	382, 1027
NspI	RCATGY	3 cut(s)	647, 1909, 2324
PciI	ACATGT	1 cut(s)	643
PciSI	GCTCTTC	2 cut(s)	723, 2508
PdmI	GAANNNNTTC	3 cut(s)	980, 1427, 2670
PfeI	GAWTC	7 cut(s)	46, 83, 173, 586, 1195, 2154, 2618
PkrI	GCNGC	9 cut(s)	21, 73, 76, 353, 1551, 1585, 1606, 1883, 2626
PleI	GAGTC	3 cut(s)	237, 2142, 2371
PpsI	GAGTC	3 cut(s)	237, 2142, 2371
PscI	ACATGT	1 cut(s)	643
Psp124BI	GAGCTC	1 cut(s)	1945
Psp1406I	AACGTT	1 cut(s)	1437
Psp6I	CCWGG	4 cut(s)	210, 280, 538, 1402
PspEI	GGTNACC	1 cut(s)	4
PspFI	CCCAGC	2 cut(s)	116, 120
PspGI	CCWGG	4 cut(s)	210, 280, 538, 1402
PspN4I	GGNNCC	7 cut(s)	125, 511, 1154, 1486, 1567, 1764, 2361
PstI	CTGCAG	1 cut(s)	2629
PstNI	CAGNNNCTG	3 cut(s)	755, 2065, 2837
PsuI	RGATCY	5 cut(s)	220, 509, 1874, 2117, 2359
PvuII	CAGCTG	2 cut(s)	120, 2624
RsaI	GTAC	8 cut(s)	295, 964, 1127, 1192, 1458, 1660, 2487, 2800
RsaNI	GTAC	8 cut(s)	294, 963, 1126, 1191, 1457, 1659, 2486, 2799
RseI	CAYNNNNRTG	1 cut(s)	2495
SacI	GAGCTC	1 cut(s)	1945
SapI	GCTCTTC	2 cut(s)	723, 2508
SatI	GCNGC	9 cut(s)	20, 72, 75, 352, 1550, 1584, 1605, 1882, 2625
ScaI	AGTACT	1 cut(s)	2800
SchI	GAGTC	3 cut(s)	237, 2142, 2371
ScrFI	CCNGG	5 cut(s)	212, 282, 540, 1404, 1601
SduI	GDGCHC	9 cut(s)	41, 1066, 1324, 1765, 1792, 1844, 1945, 2181, 2520
SfaNI	GCATC	4 cut(s)	367, 1065, 1336, 2052
SfcI	CTRYAG	6 cut(s)	1206, 1221, 1418, 1479, 2625, 2675
SinI	GGWCC	8 cut(s)	124, 265, 484, 547, 862, 950, 1565, 2564
SmiMI	CAYNNNNRTG	1 cut(s)	2495
SmlI	CTYRAG	3 cut(s)	710, 1832, 1970
SmoI	CTYRAG	3 cut(s)	710, 1832, 1970
SpeI	ACTAGT	2 cut(s)	553, 1921
SsiI	CCGC	4 cut(s)	1550, 1605, 1881, 2823
SspI	AATATT	3 cut(s)	334, 763, 2242
SspMI	CTAG	5 cut(s)	344, 554, 1070, 1367, 1922
SstI	GAGCTC	1 cut(s)	1945
StyD4I	CCNGG	5 cut(s)	210, 280, 538, 1402, 1599
StyI	CCWWGG	2 cut(s)	235, 261
TaiI	ACGT	2 cut(s)	1440, 1720
TaqI	TCGA	3 cut(s)	1385, 2613, 2847
TaqII	GACCGA	1 cut(s)	2559
TatI	WGTACW	3 cut(s)	1125, 1456, 2798
TauI	GCSGC	3 cut(s)	1552, 1607, 1884
TfiI	GAWTC	7 cut(s)	46, 83, 173, 586, 1195, 2154, 2618
TseFI	GTSAC	3 cut(s)	181, 556, 1108
TseI	GCWGC	6 cut(s)	19, 71, 74, 351, 1583, 2624
Tsp45I	GTSAC	3 cut(s)	181, 556, 1108
TspGWI	ACGGA	3 cut(s)	1284, 2103, 2468
Vha464I	CTTAAG	1 cut(s)	1832
VneI	GTGCAC	3 cut(s)	1062, 1788, 1840
VpaK11BI	GGWCC	8 cut(s)	124, 265, 484, 547, 862, 950, 1565, 2564
XapI	RAATTY	5 cut(s)	356, 793, 1132, 2124, 2257
XceI	RCATGY	3 cut(s)	647, 1909, 2324
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1755, 2245
XmiI	GTMKAC	1 cut(s)	2406
XmnI	GAANNNNTTC	3 cut(s)	980, 1427, 2670
XspI	CTAG	5 cut(s)	344, 554, 1070, 1367, 1922
ZrmI	AGTACT	1 cut(s)	2800
Zsp2I	ATGCAT	2 cut(s)	382, 1027

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.