Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G79620 AT1G79620 AT1G79620 AT1G79620 AT1G79620 |
| fragaria_vesca | FvH4_6g09020 FvH4_6g09020 |
| malus_domestica | MD04G1181800.v1.1 MD04G1182200.v1.1 MD04G1183000.v1.1 MD04G1183100.v1.1 MD12G1196600.v1.1 |
| prunus_persica | Prupe.6G301100_v2.0.a1 Prupe.6G301100_v2.0.a1 Prupe.6G301200_v2.0.a1 Prupe.6G301500_v2.0.a1 Prupe.6G301500_v2.0.a1 Prupe.6G301600_v2.0.a1 Prupe.6G301600_v2.0.a1 Prupe.6G301600_v2.0.a1 Prupe.6G301600_v2.0.a1 |
| pyrus_communis | pycom04g16070 pycom04g16150 pycom04g16170 pycom12g18280 |
| rosa_chinensis | RchiOBHm_Chr3g0459271 |
| rosa_laevigata | RLG00000025098 |
| rosa_multiflora | Rmu_sc0006220.1_g000001 Rmu_sc0010702.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00420350 |
| rosa_rugosa | Rorug03G0034900 Rorug03G0035000 |
| rosa_samantha | Rh3AG092700 Rh3BG095800 Rh3CG096800 Rh3DG096400 |
| rosa_wichuraiana | Rw3G007970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1572 |
| AccB1I | GGYRCC | 1 cut(s) | 1138 |
| AccI | GTMKAC | 1 cut(s) | 231 |
| AccII | CGCG | 3 cut(s) | 271, 1380, 1857 |
| AciI | CCGC | 9 cut(s) | 269, 434, 926, 1146, 1161, 1257, 1724, 1855, 2199 |
| AclWI | GGATC | 5 cut(s) | 248, 284, 1258, 1730, 1743 |
| AcsI | RAATTY | 3 cut(s) | 163, 1068, 2165 |
| AcyI | GRCGYC | 1 cut(s) | 1139 |
| AfaI | GTAC | 5 cut(s) | 497, 834, 1745, 1784, 1863 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 677, 747, 857 |
| AflII | CTTAAG | 2 cut(s) | 1208, 1472 |
| AflIII | ACRYGT | 3 cut(s) | 13, 835, 1696 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1092, 1124 |
| Alw21I | GWGCWC | 5 cut(s) | 1004, 1168, 1220, 1321, 2128 |
| Alw26I | GTCTC | 3 cut(s) | 127, 1040, 1516 |
| Alw44I | GTGCAC | 2 cut(s) | 1164, 1216 |
| AlwI | GGATC | 5 cut(s) | 248, 284, 1258, 1730, 1743 |
| Ama87I | CYCGRG | 3 cut(s) | 80, 626, 1346 |
| AoxI | GGCC | 3 cut(s) | 1051, 1342, 1660 |
| ApaLI | GTGCAC | 2 cut(s) | 1164, 1216 |
| ApeKI | GCWGC | 7 cut(s) | 370, 637, 959, 1672, 1825, 2000, 2111 |
| ApoI | RAATTY | 3 cut(s) | 163, 1068, 2165 |
| AseI | ATTAAT | 1 cut(s) | 509 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2046, 2165 |
| AspLEI | GCGC | 4 cut(s) | 700, 1141, 1688, 2221 |
| AspS9I | GGNCC | 3 cut(s) | 116, 941, 1051 |
| AsuC2I | CCSGG | 3 cut(s) | 627, 628, 780 |
| AsuHPI | GGTGA | 3 cut(s) | 289, 431, 1882 |
| AsuII | TTCGAA | 2 cut(s) | 1422, 1930 |
| AsuNHI | GCTAGC | 1 cut(s) | 1972 |
| AvaI | CYCGRG | 3 cut(s) | 80, 626, 1346 |
| AvaII | GGWCC | 2 cut(s) | 116, 941 |
| BaeGI | GKGCMC | 2 cut(s) | 1168, 1220 |
| BamHI | GGATCC | 1 cut(s) | 1735 |
| BanI | GGYRCC | 1 cut(s) | 1138 |
| BanII | GRGCYC | 1 cut(s) | 1321 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1829, 1861 |
| BauI | CACGAG | 1 cut(s) | 1055 |
| Bbv12I | GWGCWC | 5 cut(s) | 1004, 1168, 1220, 1321, 2128 |
| BbvI | GCAGC | 7 cut(s) | 382, 649, 971, 1659, 1837, 1987, 2123 |
| BccI | CCATC | 9 cut(s) | 20, 61, 265, 619, 831, 1182, 1286, 1867, 2054 |
| BceAI | ACGGC | 2 cut(s) | 202, 1656 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1108, 1142 |
| BciVI | GTATCC | 1 cut(s) | 2198 |
| BcnI | CCSGG | 3 cut(s) | 627, 628, 780 |
| BcoDI | GTCTC | 3 cut(s) | 127, 1040, 1516 |
| BfaI | CTAG | 5 cut(s) | 543, 597, 743, 1821, 1973 |
| BfmI | CTRYAG | 4 cut(s) | 455, 855, 2001, 2051 |
| BfoI | RGCGCY | 2 cut(s) | 701, 1142 |
| BfrI | CTTAAG | 2 cut(s) | 1208, 1472 |
| BfuAI | ACCTGC | 1 cut(s) | 1572 |
| BfuI | GTATCC | 1 cut(s) | 2198 |
| BglII | AGATCT | 2 cut(s) | 992, 1493 |
| BisI | GCNGC | 9 cut(s) | 371, 638, 926, 960, 1258, 1673, 1826, 2001, 2112 |
| BlpI | GCTNAGC | 1 cut(s) | 1320 |
| BlsI | GCNGC | 9 cut(s) | 372, 639, 927, 961, 1259, 1674, 1827, 2002, 2113 |
| BmcAI | AGTACT | 1 cut(s) | 1745 |
| Bme1390I | CCNGG | 3 cut(s) | 627, 628, 780 |
| Bme18I | GGWCC | 2 cut(s) | 116, 941 |
| BmeT110I | CYCGRG | 3 cut(s) | 80, 626, 1346 |
| BmgT120I | GGNCC | 3 cut(s) | 116, 941, 1051 |
| BmiI | GGNNCC | 7 cut(s) | 117, 524, 752, 943, 1140, 1737, 2185 |
| BmrFI | CCNGG | 3 cut(s) | 627, 628, 780 |
| BmsI | GCATC | 4 cut(s) | 435, 1323, 2096, 2123 |
| BmtI | GCTAGC | 1 cut(s) | 1976 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1709 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1358, 1390 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1320 |
| Bpu14I | TTCGAA | 2 cut(s) | 1422, 1930 |
| BpuMI | CCSGG | 3 cut(s) | 627, 628, 780 |
| Bsa29I | ATCGAT | 2 cut(s) | 816, 1331 |
| BsaBI | GATNNNNATC | 2 cut(s) | 822, 1307 |
| BsaHI | GRCGYC | 1 cut(s) | 1139 |
| BsaJI | CCNNGG | 3 cut(s) | 625, 626, 627 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1483, 1513 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 677, 747, 857 |
| Bse118I | RCCGGY | 1 cut(s) | 2180 |
| Bse1I | ACTGG | 5 cut(s) | 119, 211, 690, 1009, 1560 |
| Bse3DI | GCAATG | 2 cut(s) | 365, 1988 |
| Bse8I | GATNNNNATC | 2 cut(s) | 822, 1307 |
| BseCI | ATCGAT | 2 cut(s) | 816, 1331 |
| BseDI | CCNNGG | 3 cut(s) | 625, 626, 627 |
| BseGI | GGATG | 4 cut(s) | 354, 611, 2070, 2134 |
| BseJI | GATNNNNATC | 2 cut(s) | 822, 1307 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 677, 747, 857 |
| BseMI | GCAATG | 2 cut(s) | 365, 1988 |
| BseMII | CTCAG | 8 cut(s) | 141, 166, 662, 870, 1334, 1721, 1731, 1950 |
| BseNI | ACTGG | 5 cut(s) | 119, 211, 690, 1009, 1560 |
| BseRI | GAGGAG | 2 cut(s) | 115, 1534 |
| BseSI | GKGCMC | 2 cut(s) | 1168, 1220 |
| BseXI | GCAGC | 7 cut(s) | 382, 649, 971, 1659, 1837, 1987, 2123 |
| Bsh1236I | CGCG | 3 cut(s) | 271, 1380, 1857 |
| BshFI | GGCC | 3 cut(s) | 1053, 1344, 1662 |
| BshNI | GGYRCC | 1 cut(s) | 1138 |
| BshVI | ATCGAT | 2 cut(s) | 816, 1331 |
| BsiHKAI | GWGCWC | 5 cut(s) | 1004, 1168, 1220, 1321, 2128 |
| BsiHKCI | CYCGRG | 3 cut(s) | 80, 626, 1346 |
| BsiSI | CCGG | 3 cut(s) | 627, 780, 2181 |
| BslFI | GGGAC | 4 cut(s) | 58, 129, 346, 1995 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 677, 747, 857 |
| BsmAI | GTCTC | 3 cut(s) | 127, 1040, 1516 |
| BsmFI | GGGAC | 4 cut(s) | 58, 129, 346, 1995 |
| BsnI | GGCC | 3 cut(s) | 1053, 1344, 1662 |
| BsoBI | CYCGRG | 3 cut(s) | 80, 626, 1346 |
| Bsp119I | TTCGAA | 2 cut(s) | 1422, 1930 |
| Bsp1286I | GDGCHC | 5 cut(s) | 1004, 1168, 1220, 1321, 2128 |
| Bsp1407I | TGTACA | 1 cut(s) | 1782 |
| Bsp143I | GATC | 9 cut(s) | 253, 276, 451, 992, 1250, 1493, 1735, 1918, 2005 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1320 |
| BspACI | CCGC | 9 cut(s) | 269, 434, 926, 1146, 1161, 1257, 1724, 1855, 2199 |
| BspANI | GGCC | 3 cut(s) | 1053, 1344, 1662 |
| BspCNI | CTCAG | 8 cut(s) | 140, 165, 661, 871, 1333, 1720, 1732, 1949 |
| BspDI | ATCGAT | 2 cut(s) | 816, 1331 |
| BspFNI | CGCG | 3 cut(s) | 271, 1380, 1857 |
| BspLI | GGNNCC | 7 cut(s) | 117, 524, 752, 943, 1140, 1737, 2185 |
| BspMAI | CTGCAG | 3 cut(s) | 459, 2005, 2055 |
| BspMI | ACCTGC | 1 cut(s) | 1572 |
| BspOI | GCTAGC | 1 cut(s) | 1976 |
| BspPI | GGATC | 5 cut(s) | 248, 284, 1258, 1730, 1743 |
| BspT104I | TTCGAA | 2 cut(s) | 1422, 1930 |
| BspT107I | GGYRCC | 1 cut(s) | 1138 |
| BspTI | CTTAAG | 2 cut(s) | 1208, 1472 |
| BsrDI | GCAATG | 2 cut(s) | 365, 1988 |
| BsrFI | RCCGGY | 1 cut(s) | 2180 |
| BsrGI | TGTACA | 1 cut(s) | 1782 |
| BsrI | ACTGG | 5 cut(s) | 119, 211, 690, 1009, 1560 |
| BssAI | RCCGGY | 1 cut(s) | 2180 |
| BssECI | CCNNGG | 3 cut(s) | 625, 626, 627 |
| BssMI | GATC | 9 cut(s) | 253, 276, 451, 992, 1250, 1493, 1735, 1918, 2005 |
| BssNI | GRCGYC | 1 cut(s) | 1139 |
| BssSI | CACGAG | 1 cut(s) | 1055 |
| Bst2BI | CACGAG | 1 cut(s) | 1055 |
| Bst4CI | ACNGT | 6 cut(s) | 337, 363, 1173, 1238, 1901, 2212 |
| Bst6I | CTCTTC | 1 cut(s) | 1511 |
| BstACI | GRCGYC | 1 cut(s) | 1139 |
| BstAFI | CTTAAG | 2 cut(s) | 1208, 1472 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1649 |
| BstAUI | TGTACA | 1 cut(s) | 1782 |
| BstBI | TTCGAA | 2 cut(s) | 1422, 1930 |
| BstC8I | GCNNGC | 6 cut(s) | 172, 1283, 1575, 1726, 1974, 2153 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 675 |
| BstF5I | GGATG | 4 cut(s) | 354, 611, 2070, 2134 |
| BstFNI | CGCG | 3 cut(s) | 271, 1380, 1857 |
| BstH2I | RGCGCY | 2 cut(s) | 701, 1142 |
| BstHHI | GCGC | 4 cut(s) | 700, 1141, 1688, 2221 |
| BstKTI | GATC | 9 cut(s) | 256, 279, 454, 995, 1253, 1496, 1738, 1921, 2008 |
| BstMAI | GTCTC | 3 cut(s) | 127, 1040, 1516 |
| BstMBI | GATC | 9 cut(s) | 253, 276, 451, 992, 1250, 1493, 1735, 1918, 2005 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 442, 1103, 1136, 1649, 1978 |
| BstNSI | RCATGY | 7 cut(s) | 17, 174, 624, 839, 1097, 1285, 1700 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1709 |
| BstSCI | CCNGG | 3 cut(s) | 625, 626, 778 |
| BstSFI | CTRYAG | 4 cut(s) | 455, 855, 2001, 2051 |
| BstSLI | GKGCMC | 2 cut(s) | 1168, 1220 |
| BstUI | CGCG | 3 cut(s) | 271, 1380, 1857 |
| BstV1I | GCAGC | 7 cut(s) | 382, 649, 971, 1659, 1837, 1987, 2123 |
| BstX2I | RGATCY | 5 cut(s) | 276, 992, 1250, 1493, 1735 |
| BstYI | RGATCY | 5 cut(s) | 276, 992, 1250, 1493, 1735 |
| Bsu15I | ATCGAT | 2 cut(s) | 816, 1331 |
| BsuI | GTATCC | 1 cut(s) | 2198 |
| BsuRI | GGCC | 3 cut(s) | 1053, 1344, 1662 |
| BsuTUI | ATCGAT | 2 cut(s) | 816, 1331 |
| BtgZI | GCGATG | 2 cut(s) | 549, 1791 |
| BtsCI | GGATG | 4 cut(s) | 354, 611, 2070, 2134 |
| BtsIMutI | CAGTG | 5 cut(s) | 683, 715, 792, 1002, 2208 |
| BveI | ACCTGC | 1 cut(s) | 1572 |
| Cac8I | GCNNGC | 6 cut(s) | 172, 1283, 1575, 1726, 1974, 2153 |
| CfoI | GCGC | 4 cut(s) | 700, 1141, 1688, 2221 |
| Cfr10I | RCCGGY | 1 cut(s) | 2180 |
| Cfr13I | GGNCC | 3 cut(s) | 116, 941, 1051 |
| Cfr9I | CCCGGG | 1 cut(s) | 626 |
| ClaI | ATCGAT | 2 cut(s) | 816, 1331 |
| CseI | GACGC | 2 cut(s) | 451, 1975 |
| Csp6I | GTAC | 5 cut(s) | 496, 833, 1744, 1783, 1862 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2089, 2124 |
| CviQI | GTAC | 5 cut(s) | 496, 833, 1744, 1783, 1862 |
| DinI | GGCGCC | 1 cut(s) | 1140 |
| DpnI | GATC | 9 cut(s) | 255, 278, 453, 994, 1252, 1495, 1737, 1920, 2007 |
| DpnII | GATC | 9 cut(s) | 253, 276, 451, 992, 1250, 1493, 1735, 1918, 2005 |
| DraI | TTTAAA | 1 cut(s) | 871 |
| Eam1104I | CTCTTC | 1 cut(s) | 1511 |
| EarI | CTCTTC | 1 cut(s) | 1511 |
| Ecl136II | GAGCTC | 1 cut(s) | 1319 |
| Eco147I | AGGCCT | 1 cut(s) | 1344 |
| Eco24I | GRGCYC | 1 cut(s) | 1321 |
| Eco32I | GATATC | 3 cut(s) | 133, 668, 1023 |
| Eco47I | GGWCC | 2 cut(s) | 116, 941 |
| Eco53kI | GAGCTC | 1 cut(s) | 1319 |
| Eco88I | CYCGRG | 3 cut(s) | 80, 626, 1346 |
| EcoICRI | GAGCTC | 1 cut(s) | 1319 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 675 |
| EcoRI | GAATTC | 1 cut(s) | 2165 |
| EcoRV | GATATC | 3 cut(s) | 133, 668, 1023 |
| EcoT38I | GRGCYC | 1 cut(s) | 1321 |
| EgeI | GGCGCC | 1 cut(s) | 1140 |
| EheI | GGCGCC | 1 cut(s) | 1140 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1108, 1140, 1466, 1498 |
| FaqI | GGGAC | 4 cut(s) | 58, 129, 346, 1995 |
| FauI | CCCGC | 1 cut(s) | 1717 |
| FauNDI | CATATG | 1 cut(s) | 1198 |
| FblI | GTMKAC | 1 cut(s) | 231 |
| Fnu4HI | GCNGC | 9 cut(s) | 371, 638, 926, 960, 1258, 1673, 1826, 2001, 2112 |
| FokI | GGATG | 4 cut(s) | 361, 598, 2077, 2121 |
| FriOI | GRGCYC | 1 cut(s) | 1321 |
| Fsp4HI | GCNGC | 9 cut(s) | 371, 638, 926, 960, 1258, 1673, 1826, 2001, 2112 |
| FspBI | CTAG | 5 cut(s) | 543, 597, 743, 1821, 1973 |
| GlaI | GCGC | 4 cut(s) | 699, 1140, 1687, 2220 |
| GluI | GCNGC | 9 cut(s) | 371, 638, 926, 960, 1258, 1673, 1826, 2001, 2112 |
| HaeII | RGCGCY | 2 cut(s) | 701, 1142 |
| HaeIII | GGCC | 3 cut(s) | 1053, 1344, 1662 |
| HapII | CCGG | 3 cut(s) | 627, 780, 2181 |
| HgaI | GACGC | 2 cut(s) | 451, 1975 |
| HhaI | GCGC | 4 cut(s) | 700, 1141, 1688, 2221 |
| Hin1I | GRCGYC | 1 cut(s) | 1139 |
| Hin6I | GCGC | 4 cut(s) | 698, 1139, 1686, 2219 |
| HinP1I | GCGC | 4 cut(s) | 698, 1139, 1686, 2219 |
| HindIII | AAGCTT | 1 cut(s) | 1480 |
| HpaII | CCGG | 3 cut(s) | 627, 780, 2181 |
| HphI | GGTGA | 3 cut(s) | 289, 431, 1882 |
| Hpy166II | GTNNAC | 7 cut(s) | 232, 1166, 1218, 1273, 1447, 1611, 1783 |
| Hpy188III | TCNNGA | 9 cut(s) | 80, 889, 1018, 1354, 1508, 1733, 1739, 1834, 1938 |
| Hpy8I | GTNNAC | 7 cut(s) | 232, 1166, 1218, 1273, 1447, 1611, 1783 |
| Hpy99I | CGWCG | 1 cut(s) | 1991 |
| HpyAV | CCTTC | 7 cut(s) | 671, 955, 1261, 1831, 2026, 2141, 2155 |
| HpyCH4III | ACNGT | 6 cut(s) | 337, 363, 1173, 1238, 1901, 2212 |
| HpyCH4IV | ACGT | 1 cut(s) | 587 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 442, 1103, 1136, 1649, 1978 |
| HpySE526I | ACGT | 1 cut(s) | 587 |
| Hsp92I | GRCGYC | 1 cut(s) | 1139 |
| HspAI | GCGC | 4 cut(s) | 698, 1139, 1686, 2219 |
| KasI | GGCGCC | 1 cut(s) | 1138 |
| Kzo9I | GATC | 9 cut(s) | 253, 276, 451, 992, 1250, 1493, 1735, 1918, 2005 |
| LmnI | GCTCC | 6 cut(s) | 271, 750, 1181, 1969, 2131, 2189 |
| Lsp1109I | GCAGC | 7 cut(s) | 382, 649, 971, 1659, 1837, 1987, 2123 |
| LweI | GCATC | 4 cut(s) | 435, 1323, 2096, 2123 |
| MaeI | CTAG | 5 cut(s) | 543, 597, 743, 1821, 1973 |
| MaeII | ACGT | 1 cut(s) | 587 |
| MaeIII | GTNAC | 3 cut(s) | 239, 724, 789 |
| MalI | GATC | 9 cut(s) | 255, 278, 453, 994, 1252, 1495, 1737, 1920, 2007 |
| MboI | GATC | 9 cut(s) | 253, 276, 451, 992, 1250, 1493, 1735, 1918, 2005 |
| MboII | GAAGA | 4 cut(s) | 80, 799, 1528, 2082 |
| MfeI | CAATTG | 1 cut(s) | 1760 |
| MflI | RGATCY | 5 cut(s) | 276, 992, 1250, 1493, 1735 |
| MhlI | GDGCHC | 5 cut(s) | 1004, 1168, 1220, 1321, 2128 |
| Mly113I | GGCGCC | 1 cut(s) | 1139 |
| MlyI | GAGTC | 7 cut(s) | 70, 559, 721, 1518, 1699, 1747, 1803 |
| MmeI | TCCRAC | 2 cut(s) | 162, 254 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2046, 2165 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1392, 1599 |
| MspA1I | CMGCKG | 3 cut(s) | 1724, 2000, 2199 |
| MspCI | CTTAAG | 2 cut(s) | 1208, 1472 |
| MspI | CCGG | 3 cut(s) | 627, 780, 2181 |
| MspR9I | CCNGG | 3 cut(s) | 627, 628, 780 |
| MunI | CAATTG | 1 cut(s) | 1760 |
| MvnI | CGCG | 3 cut(s) | 271, 1380, 1857 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 442, 1103, 1136, 1649, 1978 |
| NarI | GGCGCC | 1 cut(s) | 1139 |
| NciI | CCSGG | 3 cut(s) | 627, 628, 780 |
| NdeI | CATATG | 1 cut(s) | 1198 |
| NdeII | GATC | 9 cut(s) | 253, 276, 451, 992, 1250, 1493, 1735, 1918, 2005 |
| NheI | GCTAGC | 1 cut(s) | 1972 |
| NlaIV | GGNNCC | 7 cut(s) | 117, 524, 752, 943, 1140, 1737, 2185 |
| NmeAIII | GCCGAG | 1 cut(s) | 1523 |
| NmuCI | GTSAC | 2 cut(s) | 724, 789 |
| NspI | RCATGY | 7 cut(s) | 17, 174, 624, 839, 1097, 1285, 1700 |
| NspV | TTCGAA | 2 cut(s) | 1422, 1930 |
| PaeI | GCATGC | 2 cut(s) | 174, 1285 |
| PaeR7I | CTCGAG | 2 cut(s) | 80, 1346 |
| PceI | AGGCCT | 1 cut(s) | 1344 |
| PciI | ACATGT | 3 cut(s) | 13, 835, 1696 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 399, 1927 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2046, 2165 |
| PfeI | GAWTC | 7 cut(s) | 36, 469, 539, 1328, 1413, 1530, 1994 |
| PkrI | GCNGC | 9 cut(s) | 372, 639, 927, 961, 1259, 1674, 1827, 2002, 2113 |
| PleI | GAGTC | 7 cut(s) | 70, 558, 721, 1518, 1699, 1747, 1802 |
| PluTI | GGCGCC | 1 cut(s) | 1142 |
| PpsI | GAGTC | 7 cut(s) | 70, 558, 721, 1518, 1699, 1747, 1802 |
| PscI | ACATGT | 3 cut(s) | 13, 835, 1696 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1709 |
| PshBI | ATTAAT | 1 cut(s) | 509 |
| Psp124BI | GAGCTC | 1 cut(s) | 1321 |
| PspN4I | GGNNCC | 7 cut(s) | 117, 524, 752, 943, 1140, 1737, 2185 |
| PspPI | GGNCC | 3 cut(s) | 116, 941, 1051 |
| PspXI | VCTCGAGB | 1 cut(s) | 1346 |
| PstI | CTGCAG | 3 cut(s) | 459, 2005, 2055 |
| PsuI | RGATCY | 5 cut(s) | 276, 992, 1250, 1493, 1735 |
| PvuII | CAGCTG | 1 cut(s) | 2000 |
| RsaI | GTAC | 5 cut(s) | 497, 834, 1745, 1784, 1863 |
| RsaNI | GTAC | 5 cut(s) | 496, 833, 1744, 1783, 1862 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1392, 1599 |
| SacI | GAGCTC | 1 cut(s) | 1321 |
| SatI | GCNGC | 9 cut(s) | 371, 638, 926, 960, 1258, 1673, 1826, 2001, 2112 |
| Sau3AI | GATC | 9 cut(s) | 253, 276, 451, 992, 1250, 1493, 1735, 1918, 2005 |
| Sau96I | GGNCC | 3 cut(s) | 116, 941, 1051 |
| ScaI | AGTACT | 1 cut(s) | 1745 |
| SchI | GAGTC | 7 cut(s) | 70, 559, 721, 1518, 1699, 1747, 1803 |
| ScrFI | CCNGG | 3 cut(s) | 627, 628, 780 |
| SduI | GDGCHC | 5 cut(s) | 1004, 1168, 1220, 1321, 2128 |
| SfaNI | GCATC | 4 cut(s) | 435, 1323, 2096, 2123 |
| SfcI | CTRYAG | 4 cut(s) | 455, 855, 2001, 2051 |
| SfoI | GGCGCC | 1 cut(s) | 1140 |
| Sfr274I | CTCGAG | 2 cut(s) | 80, 1346 |
| SfuI | TTCGAA | 2 cut(s) | 1422, 1930 |
| SinI | GGWCC | 2 cut(s) | 116, 941 |
| SlaI | CTCGAG | 2 cut(s) | 80, 1346 |
| SmaI | CCCGGG | 1 cut(s) | 628 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1392, 1599 |
| SmlI | CTYRAG | 4 cut(s) | 80, 1208, 1346, 1472 |
| SmoI | CTYRAG | 4 cut(s) | 80, 1208, 1346, 1472 |
| SphI | GCATGC | 2 cut(s) | 174, 1285 |
| SseBI | AGGCCT | 1 cut(s) | 1344 |
| SsiI | CCGC | 9 cut(s) | 269, 434, 926, 1146, 1161, 1257, 1724, 1855, 2199 |
| SspDI | GGCGCC | 1 cut(s) | 1138 |
| SspI | AATATT | 2 cut(s) | 63, 1618 |
| SspMI | CTAG | 5 cut(s) | 543, 597, 743, 1821, 1973 |
| SstI | GAGCTC | 1 cut(s) | 1321 |
| StuI | AGGCCT | 1 cut(s) | 1344 |
| StyD4I | CCNGG | 3 cut(s) | 625, 626, 778 |
| TaaI | ACNGT | 6 cut(s) | 337, 363, 1173, 1238, 1901, 2212 |
| TaiI | ACGT | 1 cut(s) | 590 |
| TaqII | GACCGA | 1 cut(s) | 1781 |
| TatI | WGTACW | 4 cut(s) | 495, 832, 1743, 1782 |
| TauI | GCSGC | 2 cut(s) | 928, 1260 |
| TfiI | GAWTC | 7 cut(s) | 36, 469, 539, 1328, 1413, 1530, 1994 |
| TscAI | CASTG | 5 cut(s) | 690, 715, 792, 1009, 2215 |
| TseFI | GTSAC | 2 cut(s) | 724, 789 |
| TseI | GCWGC | 7 cut(s) | 370, 637, 959, 1672, 1825, 2000, 2111 |
| Tsp45I | GTSAC | 2 cut(s) | 724, 789 |
| TspGWI | ACGGA | 2 cut(s) | 58, 617 |
| TspMI | CCCGGG | 1 cut(s) | 626 |
| TspRI | CASTG | 5 cut(s) | 690, 715, 792, 1009, 2215 |
| Vha464I | CTTAAG | 2 cut(s) | 1208, 1472 |
| VneI | GTGCAC | 2 cut(s) | 1164, 1216 |
| VpaK11BI | GGWCC | 2 cut(s) | 116, 941 |
| VspI | ATTAAT | 1 cut(s) | 509 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 675 |
| XapI | RAATTY | 3 cut(s) | 163, 1068, 2165 |
| XceI | RCATGY | 7 cut(s) | 17, 174, 624, 839, 1097, 1285, 1700 |
| XhoI | CTCGAG | 2 cut(s) | 80, 1346 |
| XmaI | CCCGGG | 1 cut(s) | 626 |
| XmiI | GTMKAC | 1 cut(s) | 231 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2046, 2165 |
| XspI | CTAG | 5 cut(s) | 543, 597, 743, 1821, 1973 |
| ZrmI | AGTACT | 1 cut(s) | 1745 |