Rroxscaffold_6G00420350

Leucine-rich repeat receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0003096
Physical Location & Seq
Reverse (-)
41622607 .. 41628370
5764 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00420350.1

Sequence Viewer

Length: 2865 bp
ATGGCAACCATGAGGTTGCTGCTGTTTCTGGCTTTGTGCTCTGGGATTCAAGTGGTGTTCTCCGATGATGCAGCTGCTGGGCTTCAATCCTTCAAGACCGTGTGGCGAAATTATCCACCCAGCTGGGACCGGTCAAGTGATTACTGTGGGTGGGAAGGAATCACCTGCAATCAGGAATCCAGTGTGACTGCAATGAGATTATCAGGCATGGGCCTGGTAGGGGATCTTAGTGGCGACATTGGGGCATTTACTGAATTAACATCCTTGGACCTTTCATTCAACCCTGGACTTACTGGTCCTCTCTCTCCACAATTAGGGCAGCTGCAAAAGTTAAATATTCTGATCCTAGCTGGCTGCAAATTCACTGGCAGTATTCCAGATGAATTGGGAAATCTTGGAGAGCTAACCTTCTTGGCTCTGAATACAAACAATTTGACCGGTAAAATACCTGCTTCTTTGGGTAAACTCTCCAAACTCTACTGGCTGGACCTTGCAGAAAATCAGTTGACTGGACCTATCCCAGTTTCATCCACGACATCCCCAGGCTTGGACCAATTAGTGAAAGCTAAACATTTCCATTTCAACAAGAACCAGCTTTCAGGTTCAATTCCAGCCACACTATTCAGCGCTGAGATGGTCCTGATACATGTGTTGTTTGATGGAAACAAATTAAGTGGGACTATTCCATCAACAATAGGACAAGTTCAGACTCTTGAGGCTCTTCGGCTTGATAGAAATGCTCTGACGGGACTAGTCCCAAAAAGTATTAACAACCTTACAAATGTCAATGAATTAAATTTGGCCCTTAACAATTTGACAGGCCCTCTGCCCGACTTGACTGGAATGAACTCCCTCAATTATGTAGACCTTAGTAACAACTCGTTTGACCCATCAGAAGCACCAAGTTGGTTCTCAGCTTTACCCGTACTCACCACTCTGGTTATAGAATATGGACCACTTCAAGGTACAGTGCCAGAGAAGCTTTTCAGCCTACAAGATCTACAGCAAGTGAAACTGAAAAATAATGCATTTAACGACACACTGAACTTGGGTGATAGCATCGGTGTACAACTAAATGTTGTTGATCTGCAGAACAATGATATTTCCCAAGTCACTATAGGTTATGAGTACAAAAATTCATTAATACTTGTAGGGAACCCTGTGTGCAACACAACCACTGGTCTCCCTTATTGTCAGATTCCGCAAACTACAATATATTCTACTACTGTTAGTTGTGGAAATGCTAAATGCCCGGAGGATCAGAAGCTCAGCCCTCAGAGTTGTCAGTGTGCATATCCGTTTGAAGGAACACTGTACTTTAGAGCACCCACTTTCAGGGATTTATCAGATGCAAATAAGTTTCACTCCCTAGAAATGAGCCTGTGGTCAAAACTTGGCCTCAATCCTGGTTCAGTTGCTCTTGAGAACCCTTTCTTCAACATTGATGACTATCTTCAAATACAGTTGGCACTCTTTCCATCTATGGGAACCTATTTTAATAGGTCAGAGATTCTGAGGATTGGTTTTGATCTGAGCAATCAAACTTACAAGCCGCCCGCTGAGTTTGGTCCCTATATTTTTATTCCAGCTCCTTATACTTTCCGGGCCGCGCATAAGAAATCTGTAAGCACTGGTGTTGTCATTGGGATAGCAATTGGTTGTACCTTTCTGGTTTTGGGCTTAGTGGGAGTCGGAATATATGCCATTCGGCAAAAAAAACGTGCAGAAAGAGCCATTGGATTAAGCAGACCATTTGCTTCTTGGGCACCCAGCGGAAAAGATAGTGGGGGTGCACCACAGTTAAAGGGAGCAAGATGGTTTTCTTATGAGGAGCTTAAGAAGTGCACCAATAATTTCTCTGACAATAATGAGATAGGATCCGGCGGCTACGGCAAGGTTTACAGGGGCATGTTTGCTGATGGACTAGTTGTGGCAATCAAAAGAGCTCAGCAAGGATCAATGCAGGGTGGTCTTGAGTTCAAGACTGAAATTGAATTGCTCTCACGAGTTCATCACAAAAATCTTGTCGGTCTTGTCGGGTTTTGTTTTGAACAAGGAGAACAGATGCTGATTTACGAATATATGCCTAATGGAACACTTAGGGAAAGCTTGTCAGGGAGATCTGGCATTCATCTCGACTGGAAGAGAAGACTCCGCATCACTCTTGGCTCAGCAAGAGGACTAGCATACCTACATGAGCTTGCAAACCCTCCTATAATCCATAGAGATATTAAGACCACCAATATTCTATTGGATGAACATTTAACGGCAAAGGTTGCAGATTTTGGCTTGTCCAAGCTGGTTTCTGACAGTGCAAAAGGGCATGTTTCAACTCAGGTCAAAGGCACACTGGGATATCTGGATCCTGAATACTACATGACTCAACAGTTAACTGAGAAGAGCGATGTATACAGTTTCGGAGTGGTTATGCTTGAATTGATAACTGCAAAGCAACCGATTGAGAAGGGAAAATACATTGTCCGCGAGGTACGCATGATAATGAACAAGGATGATGAAGAGTACTATGGGTTGAGGGAGTTAATAGATCGAAACATTAGAAACTCAGGACCCCTTATAGGTTTTGCGAGGTTCTTGGAGTTGGCCATGCAATGCGTTGAAGAATCGGCTGCAGATCGTCCAACAATGAGTGATCTTGTCAAGGCTGTTGAAACCATTCTACAGAATGATGGGATGAATACAAACTCAACATCAGCCTCTTCATCTGCCACTGACTTTAATTCTTCAAAAAGTGCTCCTAAACATCCATACAACGACGGTTTGCCAAAGAAGGATGTGACTGACACTAATAGCGCCTTTGAATACAGTGGCGGATACACCGTTTCTGCGAAAGTAGAACCGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

954

Amino Acids

104.39

Weight (kDa)

5.92

Isoelectric Point (pI)

35.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 25 - 57 5.9e-06 Leucine rich repeat N-terminal domain
LRR_8 PF13855 237 - 294 2.8e-06 Leucine rich repeat
Pkinase PF00069 620 - 887 1.1e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 622 - 887 9.7e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 173
AasI GACNNNNNNGTC 1 cut(s) 294
Acc36I ACCTGC 2 cut(s) 173, 457
AccB1I GGYRCC 1 cut(s) 1765
AccI GTMKAC 2 cut(s) 864, 2409
AccII CGCG 2 cut(s) 1610, 2484
AciI CCGC 9 cut(s) 1202, 1553, 1557, 1608, 1773, 1884, 2155, 2482, 2829
AclWI GGATC 8 cut(s) 231, 337, 1266, 1872, 1885, 1963, 2357, 2370
AcoI YGGCCR 1 cut(s) 2601
AcsI RAATTY 3 cut(s) 359, 796, 1135
AfaI GTAC 8 cut(s) 927, 967, 1068, 1130, 1316, 1663, 2490, 2522
AfeI AGCGCT 1 cut(s) 628
AfiI CCNNNNNNNGG 8 cut(s) 220, 314, 547, 962, 1304, 1335, 1484, 2576
AflII CTTAAG 1 cut(s) 1835
AflIII ACRYGT 1 cut(s) 646
AgeI ACCGGT 2 cut(s) 129, 437
AhlI ACTAGT 2 cut(s) 751, 1924
AjnI CCWGG 4 cut(s) 213, 283, 541, 1405
AjuI GAANNNNNNNTTGG 2 cut(s) 1719, 1751
Alw21I GWGCWC 6 cut(s) 41, 1327, 1795, 1847, 1948, 2755
Alw26I GTCTC 1 cut(s) 1187
Alw44I GTGCAC 2 cut(s) 1791, 1843
AlwI GGATC 8 cut(s) 231, 337, 1266, 1872, 1885, 1963, 2357, 2370
AlwNI CAGNNNCTG 2 cut(s) 77, 2068
Aor51HI AGCGCT 1 cut(s) 628
AoxI GGCC 6 cut(s) 211, 801, 820, 1396, 1605, 2601
ApaLI GTGCAC 2 cut(s) 1791, 1843
ApeKI GCWGC 7 cut(s) 19, 71, 74, 319, 322, 354, 2627
ApoI RAATTY 3 cut(s) 359, 796, 1135
ArsI GACNNNNNNTTYG 2 cut(s) 2010, 2042
AseI ATTAAT 1 cut(s) 1142
AsiGI ACCGGT 2 cut(s) 129, 437
Asp700I GAANNNNTTC 3 cut(s) 983, 1430, 2673
AspLEI GCGC 3 cut(s) 629, 1612, 2813
AsuC2I CCSGG 2 cut(s) 1253, 1604
AsuHPI GGTGA 3 cut(s) 154, 922, 1064
BaeGI GKGCMC 3 cut(s) 1768, 1795, 1847
BaeI ACNNNNGTAYC 2 cut(s) 635, 668
BalI TGGCCA 1 cut(s) 2603
BamHI GGATCC 2 cut(s) 1877, 2362
BanI GGYRCC 1 cut(s) 1765
BanII GRGCYC 1 cut(s) 1948
BarI GAAGNNNNNNTAC 2 cut(s) 2456, 2488
BauI CACGAG 1 cut(s) 2004
BbsI GAAGAC 1 cut(s) 2155
Bbv12I GWGCWC 6 cut(s) 41, 1327, 1795, 1847, 1948, 2755
BbvI GCAGC 7 cut(s) 6, 61, 83, 309, 331, 341, 2614
BccI CCATC 8 cut(s) 628, 653, 694, 898, 1486, 1809, 1913, 2681
BceAI ACGGC 2 cut(s) 1906, 2283
BcgI CGANNNNNNTGC 2 cut(s) 2116, 2150
BciT130I CCWGG 4 cut(s) 215, 285, 543, 1407
BciVI GTATCC 1 cut(s) 2825
BcnI CCSGG 2 cut(s) 1253, 1604
BcoDI GTCTC 1 cut(s) 1187
BcuI ACTAGT 2 cut(s) 751, 1924
BfaI CTAG 5 cut(s) 347, 752, 1370, 1925, 2183
BfmI CTRYAG 5 cut(s) 1001, 1088, 1116, 2628, 2678
BfoI RGCGCY 2 cut(s) 630, 2814
BfrI CTTAAG 1 cut(s) 1835
BfuAI ACCTGC 2 cut(s) 173, 457
BfuI GTATCC 1 cut(s) 2825
BglII AGATCT 2 cut(s) 997, 2120
BlpI GCTNAGC 3 cut(s) 1268, 1947, 2170
BmcAI AGTACT 1 cut(s) 2522
Bme1390I CCNGG 6 cut(s) 215, 285, 543, 1253, 1407, 1604
BmiI GGNNCC 8 cut(s) 128, 1157, 1489, 1570, 1767, 1879, 2364, 2569
BmrFI CCNGG 6 cut(s) 215, 285, 543, 1253, 1407, 1604
BmrI ACTGGG 2 cut(s) 515, 2360
BmsI GCATC 5 cut(s) 58, 1068, 1339, 2055, 2166
BmuI ACTGGG 2 cut(s) 515, 2360
BpiI GAAGAC 1 cut(s) 2155
Bpu1102I GCTNAGC 3 cut(s) 1268, 1947, 2170
BpuEI CTTGAG 3 cut(s) 734, 1442, 1994
BpuMI CCSGG 2 cut(s) 1253, 1604
BsaBI GATNNNNATC 1 cut(s) 1449
BsaI GGTCTC 1 cut(s) 1187
BsaJI CCNNGG 3 cut(s) 264, 283, 541
BsaWI WCCGGW 2 cut(s) 129, 437
Bsc4I CCNNNNNNNGG 8 cut(s) 220, 314, 547, 962, 1304, 1335, 1484, 2576
Bse118I RCCGGY 2 cut(s) 129, 437
Bse3DI GCAATG 2 cut(s) 198, 2615
Bse8I GATNNNNATC 1 cut(s) 1449
BseBI CCWGG 4 cut(s) 215, 285, 543, 1407
BseDI CCNNGG 3 cut(s) 264, 283, 541
BseGI GGATG 8 cut(s) 260, 527, 536, 2260, 2515, 2697, 2761, 2797
BseJI GATNNNNATC 1 cut(s) 1449
BseLI CCNNNNNNNGG 8 cut(s) 220, 314, 547, 962, 1304, 1335, 1484, 2576
BseMI GCAATG 2 cut(s) 198, 2615
BseRI GAGGAG 1 cut(s) 1844
BseSI GKGCMC 3 cut(s) 1768, 1795, 1847
BseXI GCAGC 7 cut(s) 6, 61, 83, 309, 331, 341, 2614
BseYI CCCAGC 4 cut(s) 77, 119, 123, 1769
BsgI GTGCAG 1 cut(s) 1743
Bsh1236I CGCG 2 cut(s) 1610, 2484
BshFI GGCC 6 cut(s) 213, 803, 822, 1398, 1607, 2603
BshNI GGYRCC 1 cut(s) 1765
BshTI ACCGGT 2 cut(s) 129, 437
BsiHKAI GWGCWC 6 cut(s) 41, 1327, 1795, 1847, 1948, 2755
BsiSI CCGG 5 cut(s) 130, 438, 1253, 1603, 1881
BslFI GGGAC 5 cut(s) 140, 691, 740, 762, 1554
BslI CCNNNNNNNGG 8 cut(s) 220, 314, 547, 962, 1304, 1335, 1484, 2576
BsmAI GTCTC 1 cut(s) 1187
BsmFI GGGAC 5 cut(s) 140, 691, 740, 762, 1554
BsmI GAATGC 1 cut(s) 2127
BsnI GGCC 6 cut(s) 213, 803, 822, 1398, 1607, 2603
Bso31I GGTCTC 1 cut(s) 1187
Bsp1286I GDGCHC 7 cut(s) 41, 1327, 1768, 1795, 1847, 1948, 2755
Bsp1407I TGTACA 1 cut(s) 1066
Bsp1720I GCTNAGC 3 cut(s) 1268, 1947, 2170
BspACI CCGC 9 cut(s) 1202, 1553, 1557, 1608, 1773, 1884, 2155, 2482, 2829
BspANI GGCC 6 cut(s) 213, 803, 822, 1398, 1607, 2603
BspFNI CGCG 2 cut(s) 1610, 2484
BspLI GGNNCC 8 cut(s) 128, 1157, 1489, 1570, 1767, 1879, 2364, 2569
BspMAI CTGCAG 2 cut(s) 1092, 2632
BspMI ACCTGC 2 cut(s) 173, 457
BspPI GGATC 8 cut(s) 231, 337, 1266, 1872, 1885, 1963, 2357, 2370
BspQI GCTCTTC 2 cut(s) 726, 2393
BspT107I GGYRCC 1 cut(s) 1765
BspTI CTTAAG 1 cut(s) 1835
BspTNI GGTCTC 1 cut(s) 1187
BsrDI GCAATG 2 cut(s) 198, 2615
BsrFI RCCGGY 2 cut(s) 129, 437
BsrGI TGTACA 1 cut(s) 1066
BssAI RCCGGY 2 cut(s) 129, 437
BssECI CCNNGG 3 cut(s) 264, 283, 541
BssNAI GTATAC 1 cut(s) 2410
BssSI CACGAG 1 cut(s) 2004
BssT1I CCWWGG 1 cut(s) 264
Bst1107I GTATAC 1 cut(s) 2410
Bst2BI CACGAG 1 cut(s) 2004
Bst2UI CCWGG 4 cut(s) 215, 285, 543, 1407
Bst6I CTCTTC 5 cut(s) 726, 2138, 2393, 2511, 2722
BstAFI CTTAAG 1 cut(s) 1835
BstAPI GCANNNNNTGC 1 cut(s) 2276
BstAUI TGTACA 1 cut(s) 1066
BstC8I GCNNGC 3 cut(s) 352, 1557, 2202
BstF5I GGATG 8 cut(s) 260, 527, 536, 2260, 2515, 2697, 2761, 2797
BstFNI CGCG 2 cut(s) 1610, 2484
BstH2I RGCGCY 2 cut(s) 630, 2814
BstHHI GCGC 3 cut(s) 629, 1612, 2813
BstMAI GTCTC 1 cut(s) 1187
BstMWI GCNNNNNNNGC 6 cut(s) 979, 1730, 1763, 1890, 2276, 2490
BstNI CCWGG 4 cut(s) 215, 285, 543, 1407
BstNSI RCATGY 3 cut(s) 650, 1912, 2327
BstSCI CCNGG 6 cut(s) 213, 283, 541, 1251, 1405, 1602
BstSFI CTRYAG 5 cut(s) 1001, 1088, 1116, 2628, 2678
BstSLI GKGCMC 3 cut(s) 1768, 1795, 1847
BstUI CGCG 2 cut(s) 1610, 2484
BstV1I GCAGC 7 cut(s) 6, 61, 83, 309, 331, 341, 2614
BstV2I GAAGAC 1 cut(s) 2155
BstX2I RGATCY 5 cut(s) 223, 997, 1877, 2120, 2362
BstXI CCANNNNNNTGG 1 cut(s) 123
BstYI RGATCY 5 cut(s) 223, 997, 1877, 2120, 2362
BstZ17I GTATAC 1 cut(s) 2410
BsuI GTATCC 1 cut(s) 2825
BsuRI GGCC 6 cut(s) 213, 803, 822, 1398, 1607, 2603
BtgZI GCGATG 1 cut(s) 2418
BtsCI GGATG 8 cut(s) 260, 527, 536, 2260, 2515, 2697, 2761, 2797
BveI ACCTGC 2 cut(s) 173, 457
Cac8I GCNNGC 3 cut(s) 352, 1557, 2202
CaiI CAGNNNCTG 2 cut(s) 77, 2068
CfoI GCGC 3 cut(s) 629, 1612, 2813
Cfr10I RCCGGY 2 cut(s) 129, 437
Csp6I GTAC 8 cut(s) 926, 966, 1067, 1129, 1315, 1662, 2489, 2521
CspAI ACCGGT 2 cut(s) 129, 437
CspCI CAANNNNNGTGG 2 cut(s) 655, 690
CviAII CATG 9 cut(s) 10, 208, 647, 1909, 2195, 2324, 2377, 2494, 2605
CviQI GTAC 8 cut(s) 926, 966, 1067, 1129, 1315, 1662, 2489, 2521
DrdI GACNNNNNNGTC 1 cut(s) 294
DseDI GACNNNNNNGTC 1 cut(s) 294
EaeI YGGCCR 1 cut(s) 2601
Eam1104I CTCTTC 5 cut(s) 726, 2138, 2393, 2511, 2722
EarI CTCTTC 5 cut(s) 726, 2138, 2393, 2511, 2722
EciI GGCGGA 1 cut(s) 2844
Ecl136II GAGCTC 1 cut(s) 1946
Eco130I CCWWGG 1 cut(s) 264
Eco24I GRGCYC 1 cut(s) 1948
Eco31I GGTCTC 1 cut(s) 1187
Eco32I GATATC 1 cut(s) 2357
Eco47III AGCGCT 1 cut(s) 628
Eco53kI GAGCTC 1 cut(s) 1946
EcoICRI GAGCTC 1 cut(s) 1946
EcoO109I RGGNCCY 2 cut(s) 821, 2567
EcoRII CCWGG 4 cut(s) 213, 283, 541, 1405
EcoRV GATATC 1 cut(s) 2357
EcoT14I CCWWGG 1 cut(s) 264
EcoT22I ATGCAT 1 cut(s) 1030
EcoT38I GRGCYC 1 cut(s) 1948
ErhI CCWWGG 1 cut(s) 264
FaeI CATG 9 cut(s) 13, 211, 650, 1912, 2198, 2327, 2380, 2497, 2608
FaqI GGGAC 5 cut(s) 140, 691, 740, 762, 1554
FatI CATG 9 cut(s) 9, 207, 646, 1908, 2194, 2323, 2376, 2493, 2604
FauI CCCGC 1 cut(s) 1564
FblI GTMKAC 2 cut(s) 864, 2409
FokI GGATG 8 cut(s) 247, 514, 523, 2267, 2522, 2704, 2748, 2804
FriOI GRGCYC 1 cut(s) 1948
FspBI CTAG 5 cut(s) 347, 752, 1370, 1925, 2183
GlaI GCGC 3 cut(s) 628, 1611, 2812
GsaI CCCAGC 4 cut(s) 81, 123, 127, 1773
HaeII RGCGCY 2 cut(s) 630, 2814
HaeIII GGCC 6 cut(s) 213, 803, 822, 1398, 1607, 2603
HapII CCGG 5 cut(s) 130, 438, 1253, 1603, 1881
HhaI GCGC 3 cut(s) 629, 1612, 2813
Hin1II CATG 9 cut(s) 13, 211, 650, 1912, 2198, 2327, 2380, 2497, 2608
Hin6I GCGC 3 cut(s) 627, 1610, 2811
HinP1I GCGC 3 cut(s) 627, 1610, 2811
HincII GTYRAC 2 cut(s) 507, 2391
HindII GTYRAC 2 cut(s) 507, 2391
HindIII AAGCTT 2 cut(s) 980, 2107
HpaI GTTAAC 1 cut(s) 2391
HpaII CCGG 5 cut(s) 130, 438, 1253, 1603, 1881
HphI GGTGA 3 cut(s) 154, 922, 1064
Hpy166II GTNNAC 9 cut(s) 464, 507, 865, 1067, 1793, 1845, 1900, 2391, 2410
Hpy8I GTNNAC 9 cut(s) 464, 507, 865, 1067, 1793, 1845, 1900, 2391, 2410
Hpy99I CGWCG 1 cut(s) 2777
HpyAV CCTTC 6 cut(s) 100, 149, 418, 1298, 2458, 2782
HpyCH4IV ACGT 1 cut(s) 1720
HpyF10VI GCNNNNNNNGC 6 cut(s) 979, 1730, 1763, 1890, 2276, 2490
HpySE526I ACGT 1 cut(s) 1720
Hsp92II CATG 9 cut(s) 13, 211, 650, 1912, 2198, 2327, 2380, 2497, 2608
HspAI GCGC 3 cut(s) 627, 1610, 2811
KspAI GTTAAC 1 cut(s) 2391
LguI GCTCTTC 2 cut(s) 726, 2393
LmnI GCTCC 4 cut(s) 1594, 1808, 1831, 2758
Lsp1109I GCAGC 7 cut(s) 6, 61, 83, 309, 331, 341, 2614
LweI GCATC 5 cut(s) 58, 1068, 1339, 2055, 2166
MaeI CTAG 5 cut(s) 347, 752, 1370, 1925, 2183
MaeII ACGT 1 cut(s) 1720
MaeIII GTNAC 4 cut(s) 184, 872, 1111, 2794
MfeI CAATTG 1 cut(s) 1653
MflI RGATCY 5 cut(s) 223, 997, 1877, 2120, 2362
MhlI GDGCHC 7 cut(s) 41, 1327, 1768, 1795, 1847, 1948, 2755
MlsI TGGCCA 1 cut(s) 2603
MluNI TGGCCA 1 cut(s) 2603
MlyI GAGTC 4 cut(s) 703, 1698, 2145, 2374
MmeI TCCRAC 2 cut(s) 1672, 2663
Mox20I TGGCCA 1 cut(s) 2603
Mph1103I ATGCAT 1 cut(s) 1030
MroXI GAANNNNTTC 3 cut(s) 983, 1430, 2673
MscI TGGCCA 1 cut(s) 2603
MslI CAYNNNNRTG 1 cut(s) 2498
Msp20I TGGCCA 1 cut(s) 2603
MspA1I CMGCKG 5 cut(s) 74, 123, 322, 1559, 1773
MspCI CTTAAG 1 cut(s) 1835
MspI CCGG 5 cut(s) 130, 438, 1253, 1603, 1881
MspR9I CCNGG 6 cut(s) 215, 285, 543, 1253, 1407, 1604
MunI CAATTG 1 cut(s) 1653
Mva1269I GAATGC 1 cut(s) 2127
MvaI CCWGG 4 cut(s) 215, 285, 543, 1407
MvnI CGCG 2 cut(s) 1610, 2484
MwoI GCNNNNNNNGC 6 cut(s) 979, 1730, 1763, 1890, 2276, 2490
NciI CCSGG 2 cut(s) 1253, 1604
NlaIII CATG 9 cut(s) 13, 211, 650, 1912, 2198, 2327, 2380, 2497, 2608
NlaIV GGNNCC 8 cut(s) 128, 1157, 1489, 1570, 1767, 1879, 2364, 2569
NmuCI GTSAC 3 cut(s) 184, 1111, 2794
NsiI ATGCAT 1 cut(s) 1030
NspI RCATGY 3 cut(s) 650, 1912, 2327
PaqCI CACCTGC 1 cut(s) 173
PciI ACATGT 1 cut(s) 646
PciSI GCTCTTC 2 cut(s) 726, 2393
PctI GAATGC 1 cut(s) 2127
PdmI GAANNNNTTC 3 cut(s) 983, 1430, 2673
PfeI GAWTC 6 cut(s) 46, 159, 176, 1198, 1510, 2621
PinAI ACCGGT 2 cut(s) 129, 437
PleI GAGTC 4 cut(s) 703, 1697, 2145, 2374
PpsI GAGTC 4 cut(s) 703, 1697, 2145, 2374
PpuMI RGGWCCY 1 cut(s) 2567
PscI ACATGT 1 cut(s) 646
PshBI ATTAAT 1 cut(s) 1142
Psp124BI GAGCTC 1 cut(s) 1948
Psp5II RGGWCCY 1 cut(s) 2567
Psp6I CCWGG 4 cut(s) 213, 283, 541, 1405
PspFI CCCAGC 4 cut(s) 77, 119, 123, 1769
PspGI CCWGG 4 cut(s) 213, 283, 541, 1405
PspN4I GGNNCC 8 cut(s) 128, 1157, 1489, 1570, 1767, 1879, 2364, 2569
PspPPI RGGWCCY 1 cut(s) 2567
PstI CTGCAG 2 cut(s) 1092, 2632
PstNI CAGNNNCTG 2 cut(s) 77, 2068
PsuI RGATCY 5 cut(s) 223, 997, 1877, 2120, 2362
PvuII CAGCTG 3 cut(s) 74, 123, 322
RsaI GTAC 8 cut(s) 927, 967, 1068, 1130, 1316, 1663, 2490, 2522
RsaNI GTAC 8 cut(s) 926, 966, 1067, 1129, 1315, 1662, 2489, 2521
RseI CAYNNNNRTG 1 cut(s) 2498
SacI GAGCTC 1 cut(s) 1948
SapI GCTCTTC 2 cut(s) 726, 2393
ScaI AGTACT 1 cut(s) 2522
SchI GAGTC 4 cut(s) 703, 1698, 2145, 2374
ScrFI CCNGG 6 cut(s) 215, 285, 543, 1253, 1407, 1604
SduI GDGCHC 7 cut(s) 41, 1327, 1768, 1795, 1847, 1948, 2755
SfaNI GCATC 5 cut(s) 58, 1068, 1339, 2055, 2166
SfcI CTRYAG 5 cut(s) 1001, 1088, 1116, 2628, 2678
SmiMI CAYNNNNRTG 1 cut(s) 2498
SmlI CTYRAG 4 cut(s) 713, 1421, 1835, 1973
SmoI CTYRAG 4 cut(s) 713, 1421, 1835, 1973
SpeI ACTAGT 2 cut(s) 751, 1924
SsiI CCGC 9 cut(s) 1202, 1553, 1557, 1608, 1773, 1884, 2155, 2482, 2829
SspI AATATT 2 cut(s) 337, 2245
SspMI CTAG 5 cut(s) 347, 752, 1370, 1925, 2183
SstI GAGCTC 1 cut(s) 1948
StyD4I CCNGG 6 cut(s) 213, 283, 541, 1251, 1405, 1602
StyI CCWWGG 1 cut(s) 264
TaiI ACGT 1 cut(s) 1723
TaqI TCGA 2 cut(s) 2136, 2548
TaqII GACCGA 1 cut(s) 2018
TatI WGTACW 4 cut(s) 1066, 1128, 1314, 2520
TauI GCSGC 3 cut(s) 1555, 1610, 1887
TfiI GAWTC 6 cut(s) 46, 159, 176, 1198, 1510, 2621
TseFI GTSAC 3 cut(s) 184, 1111, 2794
TseI GCWGC 7 cut(s) 19, 71, 74, 319, 322, 354, 2627
Tsp45I GTSAC 3 cut(s) 184, 1111, 2794
TspGWI ACGGA 1 cut(s) 1287
Vha464I CTTAAG 1 cut(s) 1835
VneI GTGCAC 2 cut(s) 1791, 1843
VspI ATTAAT 1 cut(s) 1142
XapI RAATTY 3 cut(s) 359, 796, 1135
XceI RCATGY 3 cut(s) 650, 1912, 2327
XcmI CCANNNNNNNNNTGG 2 cut(s) 1758, 2248
XmiI GTMKAC 2 cut(s) 864, 2409
XmnI GAANNNNTTC 3 cut(s) 983, 1430, 2673
XspI CTAG 5 cut(s) 347, 752, 1370, 1925, 2183
ZrmI AGTACT 1 cut(s) 2522
Zsp2I ATGCAT 1 cut(s) 1030
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.