WRKY transcription factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G37260 AT2G37260 AT2G37260 |
| fragaria_vesca | FvH4_6g15050 FvH4_6g15050 FvH4_6g15050 FvH4_6g15050 FvH4_6g15050 FvH4_6g15050 FvH4_6g15050 FvH4_6g15050 FvH4_6g15050 |
| malus_domestica | MD04G1112800.v1.1 MD04G1113100.v1.1 MD12G1128800.v1.1 MD12G1129000.v1.1 |
| prunus_persica | Prupe.6G244300_v2.0.a1 Prupe.6G244300_v2.0.a1 Prupe.6G244300_v2.0.a1 Prupe.6G244300_v2.0.a1 Prupe.6G244300_v2.0.a1 |
| pyrus_communis | pycom04g10230 pycom12g12530 |
| rosa_chinensis | RchiOBHm_Chr3g0468221 |
| rosa_laevigata | RLG00000024440 |
| rosa_multiflora | Rmu_sc0004524.1_g000004 |
| rosa_roxburghii | Rroxscaffold_6G00412890 |
| rosa_rugosa | Rorug03G0094300 Rorug03G0094400 Rorug03G0094500 Rorug03G0094600 Rorug03G0094600 |
| rosa_samantha | Rh3AG142000 Rh3BG163400 Rh3DG164100 |
| rosa_wichuraiana | Rw3G013440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 793 |
| AccBSI | CCGCTC | 1 cut(s) | 22 |
| AccI | GTMKAC | 1 cut(s) | 729 |
| AciI | CCGC | 4 cut(s) | 22, 1020, 1195, 1371 |
| AclWI | GGATC | 6 cut(s) | 903, 950, 1304, 1317, 1394, 1407 |
| AcuI | CTGAAG | 1 cut(s) | 900 |
| AfaI | GTAC | 3 cut(s) | 296, 638, 948 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 843 |
| AgsI | TTSAA | 5 cut(s) | 73, 175, 267, 361, 1419 |
| AjiI | CACGTC | 1 cut(s) | 1291 |
| AjnI | CCWGG | 2 cut(s) | 216, 1378 |
| AluBI | AGCT | 5 cut(s) | 35, 69, 88, 557, 777 |
| AluI | AGCT | 5 cut(s) | 35, 69, 88, 557, 777 |
| Alw21I | GWGCWC | 1 cut(s) | 662 |
| Alw26I | GTCTC | 4 cut(s) | 218, 454, 479, 1046 |
| Alw44I | GTGCAC | 1 cut(s) | 658 |
| AlwI | GGATC | 6 cut(s) | 903, 950, 1304, 1317, 1394, 1407 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1172 |
| AoxI | GGCC | 3 cut(s) | 53, 575, 1407 |
| ApaLI | GTGCAC | 1 cut(s) | 658 |
| ApeKI | GCWGC | 6 cut(s) | 110, 200, 236, 557, 560, 774 |
| AspLEI | GCGC | 2 cut(s) | 115, 774 |
| AspS9I | GGNCC | 2 cut(s) | 1368, 1408 |
| AsuC2I | CCSGG | 1 cut(s) | 838 |
| AsuHPI | GGTGA | 2 cut(s) | 749, 1196 |
| AvaII | GGWCC | 1 cut(s) | 1368 |
| BaeGI | GKGCMC | 1 cut(s) | 662 |
| BamHI | GGATCC | 2 cut(s) | 1309, 1399 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 897, 929 |
| BauI | CACGAG | 1 cut(s) | 1143 |
| Bbv12I | GWGCWC | 1 cut(s) | 662 |
| BbvCI | CCTCAGC | 1 cut(s) | 759 |
| BbvI | GCAGC | 6 cut(s) | 122, 187, 223, 544, 572, 786 |
| BccI | CCATC | 4 cut(s) | 158, 581, 701, 1181 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1101, 1124, 1135, 1158 |
| BciT130I | CCWGG | 2 cut(s) | 218, 1380 |
| BciVI | GTATCC | 1 cut(s) | 584 |
| BcnI | CCSGG | 1 cut(s) | 838 |
| BcoDI | GTCTC | 4 cut(s) | 218, 454, 479, 1046 |
| BfaI | CTAG | 2 cut(s) | 366, 1071 |
| BfmI | CTRYAG | 4 cut(s) | 498, 558, 1164, 1252 |
| BfoI | RGCGCY | 1 cut(s) | 116 |
| BfuI | GTATCC | 1 cut(s) | 584 |
| BglII | AGATCT | 1 cut(s) | 698 |
| BisI | GCNGC | 6 cut(s) | 111, 201, 237, 558, 561, 775 |
| BlsI | GCNGC | 6 cut(s) | 112, 202, 238, 559, 562, 776 |
| Bme1390I | CCNGG | 3 cut(s) | 218, 838, 1380 |
| Bme18I | GGWCC | 1 cut(s) | 1368 |
| BmgBI | CACGTC | 1 cut(s) | 1291 |
| BmgT120I | GGNCC | 2 cut(s) | 1368, 1408 |
| BmiI | GGNNCC | 3 cut(s) | 1311, 1401, 1410 |
| BmrFI | CCNGG | 3 cut(s) | 218, 838, 1380 |
| BmsI | GCATC | 6 cut(s) | 97, 529, 802, 815, 1247, 1394 |
| BpmI | CTGGAG | 1 cut(s) | 1219 |
| Bpu10I | CCTNAGC | 1 cut(s) | 759 |
| BpuMI | CCSGG | 1 cut(s) | 838 |
| Bsa29I | ATCGAT | 1 cut(s) | 105 |
| BsaBI | GATNNNNATC | 1 cut(s) | 805 |
| BsaI | GGTCTC | 1 cut(s) | 218 |
| BsaJI | CCNNGG | 4 cut(s) | 216, 339, 1378, 1379 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 979, 1009 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 843 |
| Bse1I | ACTGG | 6 cut(s) | 403, 506, 823, 917, 973, 1263 |
| Bse8I | GATNNNNATC | 1 cut(s) | 805 |
| BseBI | CCWGG | 2 cut(s) | 218, 1380 |
| BseCI | ATCGAT | 1 cut(s) | 105 |
| BseDI | CCNNGG | 4 cut(s) | 216, 339, 1378, 1379 |
| BseGI | GGATG | 4 cut(s) | 190, 544, 664, 712 |
| BseJI | GATNNNNATC | 1 cut(s) | 805 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 843 |
| BseMII | CTCAG | 4 cut(s) | 711, 773, 1164, 1355 |
| BseNI | ACTGG | 6 cut(s) | 403, 506, 823, 917, 973, 1263 |
| BseSI | GKGCMC | 1 cut(s) | 662 |
| BseXI | GCAGC | 6 cut(s) | 122, 187, 223, 544, 572, 786 |
| BseYI | CCCAGC | 1 cut(s) | 553 |
| BshFI | GGCC | 3 cut(s) | 55, 577, 1409 |
| BshVI | ATCGAT | 1 cut(s) | 105 |
| BsiHKAI | GWGCWC | 1 cut(s) | 662 |
| BsiSI | CCGG | 1 cut(s) | 838 |
| BslFI | GGGAC | 3 cut(s) | 409, 660, 799 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 843 |
| BsmAI | GTCTC | 4 cut(s) | 218, 454, 479, 1046 |
| BsmBI | CGTCTC | 1 cut(s) | 454 |
| BsmFI | GGGAC | 3 cut(s) | 409, 660, 799 |
| BsmI | GAATGC | 1 cut(s) | 922 |
| BsnI | GGCC | 3 cut(s) | 55, 577, 1409 |
| Bso31I | GGTCTC | 1 cut(s) | 218 |
| Bsp1286I | GDGCHC | 1 cut(s) | 662 |
| Bsp1407I | TGTACA | 1 cut(s) | 294 |
| Bsp143I | GATC | 6 cut(s) | 473, 698, 895, 955, 1309, 1399 |
| BspACI | CCGC | 4 cut(s) | 22, 1020, 1195, 1371 |
| BspANI | GGCC | 3 cut(s) | 55, 577, 1409 |
| BspCNI | CTCAG | 4 cut(s) | 712, 772, 1165, 1356 |
| BspDI | ATCGAT | 1 cut(s) | 105 |
| BspLI | GGNNCC | 3 cut(s) | 1311, 1401, 1410 |
| BspMAI | CTGCAG | 2 cut(s) | 562, 1168 |
| BspPI | GGATC | 6 cut(s) | 903, 950, 1304, 1317, 1394, 1407 |
| BspTNI | GGTCTC | 1 cut(s) | 218 |
| BsrBI | CCGCTC | 1 cut(s) | 22 |
| BsrGI | TGTACA | 1 cut(s) | 294 |
| BsrI | ACTGG | 6 cut(s) | 403, 506, 823, 917, 973, 1263 |
| BssECI | CCNNGG | 4 cut(s) | 216, 339, 1378, 1379 |
| BssMI | GATC | 6 cut(s) | 473, 698, 895, 955, 1309, 1399 |
| BssNAI | GTATAC | 1 cut(s) | 730 |
| BssSI | CACGAG | 1 cut(s) | 1143 |
| BssT1I | CCWWGG | 1 cut(s) | 339 |
| Bst1107I | GTATAC | 1 cut(s) | 730 |
| Bst2BI | CACGAG | 1 cut(s) | 1143 |
| Bst2UI | CCWGG | 2 cut(s) | 218, 1380 |
| Bst4CI | ACNGT | 5 cut(s) | 166, 289, 331, 384, 422 |
| Bst6I | CTCTTC | 1 cut(s) | 528 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 812 |
| BstAUI | TGTACA | 1 cut(s) | 294 |
| BstC8I | GCNNGC | 3 cut(s) | 371, 985, 1114 |
| BstDEI | CTNAG | 4 cut(s) | 720, 759, 1173, 1364 |
| BstF5I | GGATG | 4 cut(s) | 190, 544, 664, 712 |
| BstH2I | RGCGCY | 1 cut(s) | 116 |
| BstHHI | GCGC | 2 cut(s) | 115, 774 |
| BstKTI | GATC | 6 cut(s) | 476, 701, 898, 958, 1312, 1402 |
| BstMAI | GTCTC | 4 cut(s) | 218, 454, 479, 1046 |
| BstMBI | GATC | 6 cut(s) | 473, 698, 895, 955, 1309, 1399 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 107, 146, 769, 812, 989, 1122 |
| BstNI | CCWGG | 2 cut(s) | 218, 1380 |
| BstNSI | RCATGY | 1 cut(s) | 1360 |
| BstSCI | CCNGG | 3 cut(s) | 216, 836, 1378 |
| BstSFI | CTRYAG | 4 cut(s) | 498, 558, 1164, 1252 |
| BstSLI | GKGCMC | 1 cut(s) | 662 |
| BstV1I | GCAGC | 6 cut(s) | 122, 187, 223, 544, 572, 786 |
| BstX2I | RGATCY | 3 cut(s) | 698, 1309, 1399 |
| BstYI | RGATCY | 3 cut(s) | 698, 1309, 1399 |
| BstZ17I | GTATAC | 1 cut(s) | 730 |
| Bsu15I | ATCGAT | 1 cut(s) | 105 |
| BsuI | GTATCC | 1 cut(s) | 584 |
| BsuRI | GGCC | 3 cut(s) | 55, 577, 1409 |
| BsuTUI | ATCGAT | 1 cut(s) | 105 |
| BtrI | CACGTC | 1 cut(s) | 1291 |
| BtsCI | GGATG | 4 cut(s) | 190, 544, 664, 712 |
| BtsI | GCAGTG | 2 cut(s) | 987, 1282 |
| BtsIMutI | CAGTG | 5 cut(s) | 924, 987, 1270, 1282, 1361 |
| Cac8I | GCNNGC | 3 cut(s) | 371, 985, 1114 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1172 |
| CfoI | GCGC | 2 cut(s) | 115, 774 |
| Cfr13I | GGNCC | 2 cut(s) | 1368, 1408 |
| ClaI | ATCGAT | 1 cut(s) | 105 |
| CseI | GACGC | 1 cut(s) | 796 |
| Csp6I | GTAC | 3 cut(s) | 295, 637, 947 |
| CviAII | CATG | 5 cut(s) | 477, 1132, 1352, 1357, 1434 |
| CviQI | GTAC | 3 cut(s) | 295, 637, 947 |
| DdeI | CTNAG | 4 cut(s) | 720, 759, 1173, 1364 |
| DpnI | GATC | 6 cut(s) | 475, 700, 897, 957, 1311, 1401 |
| DpnII | GATC | 6 cut(s) | 473, 698, 895, 955, 1309, 1399 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 793 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 793 |
| Eam1104I | CTCTTC | 1 cut(s) | 528 |
| EarI | CTCTTC | 1 cut(s) | 528 |
| Eco130I | CCWWGG | 1 cut(s) | 339 |
| Eco147I | AGGCCT | 2 cut(s) | 55, 577 |
| Eco31I | GGTCTC | 1 cut(s) | 218 |
| Eco47I | GGWCC | 1 cut(s) | 1368 |
| Eco57I | CTGAAG | 1 cut(s) | 900 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1408 |
| EcoRII | CCWGG | 2 cut(s) | 216, 1378 |
| EcoT14I | CCWWGG | 1 cut(s) | 339 |
| ErhI | CCWWGG | 1 cut(s) | 339 |
| Esp3I | CGTCTC | 1 cut(s) | 454 |
| FaeI | CATG | 5 cut(s) | 480, 1135, 1355, 1360, 1437 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 43, 75 |
| FaqI | GGGAC | 3 cut(s) | 409, 660, 799 |
| FatI | CATG | 5 cut(s) | 476, 1131, 1351, 1356, 1433 |
| FauI | CCCGC | 1 cut(s) | 15 |
| FblI | GTMKAC | 1 cut(s) | 729 |
| Fnu4HI | GCNGC | 6 cut(s) | 111, 201, 237, 558, 561, 775 |
| FokI | GGATG | 4 cut(s) | 177, 551, 651, 719 |
| Fsp4HI | GCNGC | 6 cut(s) | 111, 201, 237, 558, 561, 775 |
| FspBI | CTAG | 2 cut(s) | 366, 1071 |
| GlaI | GCGC | 2 cut(s) | 114, 773 |
| GluI | GCNGC | 6 cut(s) | 111, 201, 237, 558, 561, 775 |
| GsaI | CCCAGC | 1 cut(s) | 557 |
| GsuI | CTGGAG | 1 cut(s) | 1219 |
| HaeII | RGCGCY | 1 cut(s) | 116 |
| HaeIII | GGCC | 3 cut(s) | 55, 577, 1409 |
| HapII | CCGG | 1 cut(s) | 838 |
| HgaI | GACGC | 1 cut(s) | 796 |
| HhaI | GCGC | 2 cut(s) | 115, 774 |
| Hin1II | CATG | 5 cut(s) | 480, 1135, 1355, 1360, 1437 |
| Hin6I | GCGC | 2 cut(s) | 113, 772 |
| HinP1I | GCGC | 2 cut(s) | 113, 772 |
| HinfI | GANTC | 1 cut(s) | 1096 |
| HpaII | CCGG | 1 cut(s) | 838 |
| HphI | GGTGA | 2 cut(s) | 749, 1196 |
| Hpy166II | GTNNAC | 4 cut(s) | 295, 660, 730, 740 |
| Hpy188III | TCNNGA | 4 cut(s) | 694, 798, 824, 998 |
| Hpy8I | GTNNAC | 4 cut(s) | 295, 660, 730, 740 |
| Hpy99I | CGWCG | 1 cut(s) | 1295 |
| HpyAV | CCTTC | 6 cut(s) | 253, 588, 866, 875, 1028, 1425 |
| HpyCH4III | ACNGT | 5 cut(s) | 166, 289, 331, 384, 422 |
| HpyCH4IV | ACGT | 2 cut(s) | 412, 1290 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 107, 146, 769, 812, 989, 1122 |
| HpyF3I | CTNAG | 4 cut(s) | 720, 759, 1173, 1364 |
| HpySE526I | ACGT | 2 cut(s) | 412, 1290 |
| Hsp92II | CATG | 5 cut(s) | 480, 1135, 1355, 1360, 1437 |
| HspAI | GCGC | 2 cut(s) | 113, 772 |
| Kzo9I | GATC | 6 cut(s) | 473, 698, 895, 955, 1309, 1399 |
| LmnI | GCTCC | 1 cut(s) | 85 |
| Lsp1109I | GCAGC | 6 cut(s) | 122, 187, 223, 544, 572, 786 |
| LweI | GCATC | 6 cut(s) | 97, 529, 802, 815, 1247, 1394 |
| MaeI | CTAG | 2 cut(s) | 366, 1071 |
| MaeII | ACGT | 2 cut(s) | 412, 1290 |
| MaeIII | GTNAC | 1 cut(s) | 1247 |
| MalI | GATC | 6 cut(s) | 475, 700, 897, 957, 1311, 1401 |
| MbiI | CCGCTC | 1 cut(s) | 22 |
| MboI | GATC | 6 cut(s) | 473, 698, 895, 955, 1309, 1399 |
| MboII | GAAGA | 4 cut(s) | 120, 204, 545, 1095 |
| MfeI | CAATTG | 1 cut(s) | 595 |
| MflI | RGATCY | 3 cut(s) | 698, 1309, 1399 |
| MhlI | GDGCHC | 1 cut(s) | 662 |
| MluCI | AATT | 5 cut(s) | 240, 247, 595, 670, 1003 |
| MmeI | TCCRAC | 1 cut(s) | 889 |
| MseI | TTAA | 2 cut(s) | 9, 858 |
| MslI | CAYNNNNRTG | 2 cut(s) | 858, 1350 |
| MspA1I | CMGCKG | 2 cut(s) | 557, 1197 |
| MspI | CCGG | 1 cut(s) | 838 |
| MspR9I | CCNGG | 3 cut(s) | 218, 838, 1380 |
| MunI | CAATTG | 1 cut(s) | 595 |
| Mva1269I | GAATGC | 1 cut(s) | 922 |
| MvaI | CCWGG | 2 cut(s) | 218, 1380 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 107, 146, 769, 812, 989, 1122 |
| NciI | CCSGG | 1 cut(s) | 838 |
| NdeII | GATC | 6 cut(s) | 473, 698, 895, 955, 1309, 1399 |
| NlaIII | CATG | 5 cut(s) | 480, 1135, 1355, 1360, 1437 |
| NlaIV | GGNNCC | 3 cut(s) | 1311, 1401, 1410 |
| NmeAIII | GCCGAG | 1 cut(s) | 508 |
| NspI | RCATGY | 1 cut(s) | 1360 |
| PasI | CCCWGGG | 1 cut(s) | 1379 |
| PceI | AGGCCT | 2 cut(s) | 55, 577 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 418 |
| PctI | GAATGC | 1 cut(s) | 922 |
| PfeI | GAWTC | 1 cut(s) | 1096 |
| PkrI | GCNGC | 6 cut(s) | 112, 202, 238, 559, 562, 776 |
| Psp6I | CCWGG | 2 cut(s) | 216, 1378 |
| PspFI | CCCAGC | 1 cut(s) | 553 |
| PspGI | CCWGG | 2 cut(s) | 216, 1378 |
| PspN4I | GGNNCC | 3 cut(s) | 1311, 1401, 1410 |
| PspPI | GGNCC | 2 cut(s) | 1368, 1408 |
| PstI | CTGCAG | 2 cut(s) | 562, 1168 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1172 |
| PsuI | RGATCY | 3 cut(s) | 698, 1309, 1399 |
| PvuII | CAGCTG | 1 cut(s) | 557 |
| RsaI | GTAC | 3 cut(s) | 296, 638, 948 |
| RsaNI | GTAC | 3 cut(s) | 295, 637, 947 |
| RseI | CAYNNNNRTG | 2 cut(s) | 858, 1350 |
| SaqAI | TTAA | 2 cut(s) | 9, 858 |
| SatI | GCNGC | 6 cut(s) | 111, 201, 237, 558, 561, 775 |
| Sau3AI | GATC | 6 cut(s) | 473, 698, 895, 955, 1309, 1399 |
| Sau96I | GGNCC | 2 cut(s) | 1368, 1408 |
| ScrFI | CCNGG | 3 cut(s) | 218, 838, 1380 |
| SduI | GDGCHC | 1 cut(s) | 662 |
| SfaNI | GCATC | 6 cut(s) | 97, 529, 802, 815, 1247, 1394 |
| SfcI | CTRYAG | 4 cut(s) | 498, 558, 1164, 1252 |
| SinI | GGWCC | 1 cut(s) | 1368 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 858, 1350 |
| Sse9I | AATT | 5 cut(s) | 240, 247, 595, 670, 1003 |
| SseBI | AGGCCT | 2 cut(s) | 55, 577 |
| SsiI | CCGC | 4 cut(s) | 22, 1020, 1195, 1371 |
| SspMI | CTAG | 2 cut(s) | 366, 1071 |
| StuI | AGGCCT | 2 cut(s) | 55, 577 |
| StyD4I | CCNGG | 3 cut(s) | 216, 836, 1378 |
| StyI | CCWWGG | 1 cut(s) | 339 |
| TaaI | ACNGT | 5 cut(s) | 166, 289, 331, 384, 422 |
| TaiI | ACGT | 2 cut(s) | 415, 1293 |
| TaqI | TCGA | 5 cut(s) | 105, 320, 472, 693, 1293 |
| TasI | AATT | 5 cut(s) | 240, 247, 595, 670, 1003 |
| TatI | WGTACW | 2 cut(s) | 294, 946 |
| TfiI | GAWTC | 1 cut(s) | 1096 |
| Tru1I | TTAA | 2 cut(s) | 9, 858 |
| Tru9I | TTAA | 2 cut(s) | 9, 858 |
| TscAI | CASTG | 5 cut(s) | 924, 994, 1270, 1282, 1368 |
| TseI | GCWGC | 6 cut(s) | 110, 200, 236, 557, 560, 774 |
| TspDTI | ATGAA | 3 cut(s) | 876, 885, 918 |
| TspGWI | ACGGA | 1 cut(s) | 98 |
| TspRI | CASTG | 5 cut(s) | 924, 994, 1270, 1282, 1368 |
| VneI | GTGCAC | 1 cut(s) | 658 |
| VpaK11BI | GGWCC | 1 cut(s) | 1368 |
| XceI | RCATGY | 1 cut(s) | 1360 |
| XmiI | GTMKAC | 1 cut(s) | 729 |
| XspI | CTAG | 2 cut(s) | 366, 1071 |