Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003329

Physical Location & Seq

Genomic Coordinates Reverse (-)

14286282 .. 14290896

Gene Structure 4615 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ43414

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1437 bp

ATGGACATTAAGGAGGCAGAGCGGGTAGTGATAGCTAAACCTGTTGCTTCAAGGCCTACTTGTTCCAGCTTTAAGTCATTCACGGAGCTTCTCACAGGTGCTATCGATGCATCACCCTCTAATGTATCTTCTGAAACTGCTGTTCCTGCCATCAGACCAAAGACTGTAAGGTTCAAGCCAACAGCGACTCATCCGGTTGTTGGATTGGTTTCTCCCCCGGCAGAGACCCCTGGTGCTGCACTTAGTAATTCGGCAGAGAAGGTTTCAAAATCAGATAATAAATCAACTGTGGTATATAAACCATTGGCAAAAGTTGTATCCAGGGCGACTGTTACTGCCTTGGCTAATCTGGGAAACTTCAATACTAGCCAGCAACAACCACAATCATCAGTTGGGGTTGGAGTGGTTCTACATCCAAACCGTGAAAAATGCTTTAAAACCCAACTTATCTCCAACCTCTACCAGAAAAGTCCATCATGTGCTGAGACATGCCAGAGTACAGAACCAGTAAAGATAGTACCACAAAATATGGAAGAGGATGCAAAAAATATACCAGCTGCAGCCAATAGTGATAGGCCTTCTTATGATGGATATAATTGGAGAAAATATGGACAAAAGCAAGTCAAAGGAAGTGACTATCCGCGAAGTTATTACAAGTGCACACATCCAAATTGTCCTGTGAAAAAGAAGGTTGAGAGATCTTTGGATGGGCAGATTGCTGAGATTGTATACAAGGGAGAACACAACCACTCAAAGCCTCAGCCTCCAAAGCGCAGCTCCTCTGGGACGCAAGGGTCAGGATTTGCATCTGATGCAACTGGTCAAGATAACAACACCCGGTTATGGAATAGTCATCTTAATGAAAAGAATGAAGGTTCTGAAGGTAGAGTAGAGGATCAGAATGAAGTTGGAGTACCTTTGCATTCTTATCAAAGCAAATCCATAGTACATTATGATCCACTTGCAACTGGAGCATTAAATGCTGGAGGTGCAACTCCTGATAATTCTTGTGGAGTCAGCGGAGAATGCGAGGAAGCAAGCAAGGGAGTTGAAGCAGAGGATTATGAGCCTAGAAGTAAGAGAAGAAAAAGTGAGAATCAATCAAATGAAGTAGGCATATCGGGGGAAGTCATGCAAGAACCTCGGGTTGTGGTGCAGAGTTCTGCAGATTCTGAGATTACAGGTGATGGCTTCCGCTGGAGGAAATATGGGCAGAAGGTTGTAAAGGGGAATCCATATCCCAGAAGTTACTACAGATGCACCAGTGTCAAATGCAGTGTGCGTAAGCATGTGGAAAGAGTCTCAGAGGATCCGAAAGCCTTTATCACAACATACGAGGGAAAGCACAACCATGACATGCCGCTGAGGACCGCAAACCCAGGAGCATCATCAGAAAAGGATACACAGCCCCCCCCTACAAGTAAAGAAAAGCCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001708 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0008544 GO:0009791 GO:0009888 GO:0009889 GO:0009913 GO:0009957 GO:0009987 GO:0010154 GO:0010214 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0030855 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0045165 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0060429 GO:0061458 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

478

Amino Acids

52.06

Weight (kDa)

8.93

Isoelectric Point (pI)

48.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WRKY	PF03106	196 - 250	1.8e-26	WRKY DNA -binding domain
WRKY	PF03106	396 - 452	4e-26	WRKY DNA -binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003329)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G37260 AT2G37260 AT2G37260
fragaria_vesca	FvH4_6g15050 FvH4_6g15050 FvH4_6g15050 FvH4_6g15050 FvH4_6g15050 FvH4_6g15050 FvH4_6g15050 FvH4_6g15050 FvH4_6g15050
malus_domestica	MD04G1112800.v1.1 MD04G1113100.v1.1 MD12G1128800.v1.1 MD12G1129000.v1.1
prunus_persica	Prupe.6G244300_v2.0.a1 Prupe.6G244300_v2.0.a1 Prupe.6G244300_v2.0.a1 Prupe.6G244300_v2.0.a1 Prupe.6G244300_v2.0.a1
pyrus_communis	pycom04g10230 pycom12g12530
rosa_chinensis	RchiOBHm_Chr3g0468221
rosa_laevigata	RLG00000024440
rosa_multiflora	Rmu_sc0004524.1_g000004
rosa_roxburghii	Rroxscaffold_6G00412890
rosa_rugosa	Rorug03G0094300 Rorug03G0094400 Rorug03G0094500 Rorug03G0094600 Rorug03G0094600
rosa_samantha	Rh3AG142000 Rh3BG163400 Rh3DG164100
rosa_wichuraiana	Rw3G013440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	793
AccBSI	CCGCTC	1 cut(s)	22
AccI	GTMKAC	1 cut(s)	729
AccII	CGCG	1 cut(s)	643
AciI	CCGC	6 cut(s)	22, 641, 1020, 1195, 1361, 1371
AclWI	GGATC	4 cut(s)	903, 950, 1304, 1317
AcuI	CTGAAG	1 cut(s)	900
AfaI	GTAC	4 cut(s)	499, 519, 915, 948
AfiI	CCNNNNNNNGG	2 cut(s)	200, 843
AgsI	TTSAA	5 cut(s)	51, 175, 267, 361, 1052
AjnI	CCWGG	3 cut(s)	229, 320, 1378
AluBI	AGCT	5 cut(s)	35, 69, 88, 557, 777
AluI	AGCT	5 cut(s)	35, 69, 88, 557, 777
Alw21I	GWGCWC	1 cut(s)	662
Alw26I	GTCTC	3 cut(s)	218, 479, 1306
Alw44I	GTGCAC	1 cut(s)	658
AlwI	GGATC	4 cut(s)	903, 950, 1304, 1317
AlwNI	CAGNNNCTG	1 cut(s)	1172
Ama87I	CYCGRG	1 cut(s)	1143
AoxI	GGCC	2 cut(s)	53, 575
ApaLI	GTGCAC	1 cut(s)	658
ApeKI	GCWGC	4 cut(s)	236, 557, 560, 774
AspLEI	GCGC	1 cut(s)	774
AspS9I	GGNCC	1 cut(s)	1368
AsuC2I	CCSGG	2 cut(s)	218, 838
AsuHPI	GGTGA	2 cut(s)	105, 1196
AvaI	CYCGRG	1 cut(s)	1143
AvaII	GGWCC	1 cut(s)	1368
BaeGI	GKGCMC	1 cut(s)	662
BamHI	GGATCC	1 cut(s)	1309
BarI	GAAGNNNNNNTAC	2 cut(s)	897, 929
Bbv12I	GWGCWC	1 cut(s)	662
BbvCI	CCTCAGC	2 cut(s)	759, 1364
BbvI	GCAGC	4 cut(s)	223, 544, 572, 786
BccI	CCATC	5 cut(s)	158, 481, 581, 701, 1181
BcgI	CGANNNNNNTGC	2 cut(s)	1124, 1158
BciT130I	CCWGG	3 cut(s)	231, 322, 1380
BciVI	GTATCC	2 cut(s)	328, 1393
BcnI	CCSGG	2 cut(s)	218, 838
BcoDI	GTCTC	3 cut(s)	218, 479, 1306
BfaI	CTAG	2 cut(s)	366, 1071
BfmI	CTRYAG	3 cut(s)	558, 1164, 1252
BfuI	GTATCC	2 cut(s)	328, 1393
BglII	AGATCT	1 cut(s)	698
BisI	GCNGC	5 cut(s)	237, 558, 561, 775, 1361
BlsI	GCNGC	5 cut(s)	238, 559, 562, 776, 1362
Bme1390I	CCNGG	5 cut(s)	218, 231, 322, 838, 1380
Bme18I	GGWCC	1 cut(s)	1368
BmeT110I	CYCGRG	1 cut(s)	1143
BmgT120I	GGNCC	1 cut(s)	1368
BmiI	GGNNCC	1 cut(s)	1311
BmrFI	CCNGG	5 cut(s)	218, 231, 322, 838, 1380
BmsI	GCATC	7 cut(s)	97, 119, 529, 802, 815, 1247, 1394
BpmI	CTGGAG	3 cut(s)	990, 1005, 1219
Bpu10I	CCTNAGC	2 cut(s)	759, 1364
BpuMI	CCSGG	2 cut(s)	218, 838
Bsa29I	ATCGAT	1 cut(s)	105
BsaBI	GATNNNNATC	1 cut(s)	805
BsaI	GGTCTC	1 cut(s)	218
BsaJI	CCNNGG	6 cut(s)	216, 229, 321, 339, 1142, 1378
BsaWI	WCCGGW	1 cut(s)	193
Bsc4I	CCNNNNNNNGG	2 cut(s)	200, 843
Bse1I	ACTGG	4 cut(s)	506, 823, 973, 1263
Bse8I	GATNNNNATC	1 cut(s)	805
BseBI	CCWGG	3 cut(s)	231, 322, 1380
BseCI	ATCGAT	1 cut(s)	105
BseDI	CCNNGG	6 cut(s)	216, 229, 321, 339, 1142, 1378
BseGI	GGATG	5 cut(s)	190, 412, 544, 664, 712
BseJI	GATNNNNATC	1 cut(s)	805
BseLI	CCNNNNNNNGG	2 cut(s)	200, 843
BseMII	CTCAG	6 cut(s)	474, 711, 773, 1164, 1317, 1355
BseNI	ACTGG	4 cut(s)	506, 823, 973, 1263
BseRI	GAGGAG	1 cut(s)	769
BseSI	GKGCMC	1 cut(s)	662
BseXI	GCAGC	4 cut(s)	223, 544, 572, 786
BsgI	GTGCAG	2 cut(s)	222, 1175
Bsh1236I	CGCG	1 cut(s)	643
BshFI	GGCC	2 cut(s)	55, 577
BshVI	ATCGAT	1 cut(s)	105
BsiHKAI	GWGCWC	1 cut(s)	662
BsiHKCI	CYCGRG	1 cut(s)	1143
BsiSI	CCGG	3 cut(s)	194, 218, 838
BslFI	GGGAC	1 cut(s)	799
BslI	CCNNNNNNNGG	2 cut(s)	200, 843
BsmAI	GTCTC	3 cut(s)	218, 479, 1306
BsmFI	GGGAC	1 cut(s)	799
BsmI	GAATGC	2 cut(s)	922, 1031
BsnI	GGCC	2 cut(s)	55, 577
Bso31I	GGTCTC	1 cut(s)	218
BsoBI	CYCGRG	1 cut(s)	1143
Bsp1286I	GDGCHC	1 cut(s)	662
Bsp143I	GATC	4 cut(s)	698, 895, 955, 1309
BspACI	CCGC	6 cut(s)	22, 641, 1020, 1195, 1361, 1371
BspANI	GGCC	2 cut(s)	55, 577
BspCNI	CTCAG	6 cut(s)	475, 712, 772, 1165, 1316, 1356
BspDI	ATCGAT	1 cut(s)	105
BspFNI	CGCG	1 cut(s)	643
BspLI	GGNNCC	1 cut(s)	1311
BspMAI	CTGCAG	2 cut(s)	562, 1168
BspPI	GGATC	4 cut(s)	903, 950, 1304, 1317
BspTNI	GGTCTC	1 cut(s)	218
BsrBI	CCGCTC	1 cut(s)	22
BsrI	ACTGG	4 cut(s)	506, 823, 973, 1263
BssECI	CCNNGG	6 cut(s)	216, 229, 321, 339, 1142, 1378
BssMI	GATC	4 cut(s)	698, 895, 955, 1309
BssNAI	GTATAC	1 cut(s)	730
BssT1I	CCWWGG	1 cut(s)	339
Bst1107I	GTATAC	1 cut(s)	730
Bst2UI	CCWGG	3 cut(s)	231, 322, 1380
Bst4CI	ACNGT	4 cut(s)	166, 289, 331, 422
Bst6I	CTCTTC	1 cut(s)	528
BstAPI	GCANNNNNTGC	2 cut(s)	812, 980
BstC8I	GCNNGC	2 cut(s)	371, 1039
BstDEI	CTNAG	7 cut(s)	242, 483, 720, 759, 1173, 1303, 1364
BstF5I	GGATG	5 cut(s)	190, 412, 544, 664, 712
BstFNI	CGCG	1 cut(s)	643
BstHHI	GCGC	1 cut(s)	774
BstKTI	GATC	4 cut(s)	701, 898, 958, 1312
BstMAI	GTCTC	3 cut(s)	218, 479, 1306
BstMBI	GATC	4 cut(s)	698, 895, 955, 1309
BstMWI	GCNNNNNNNGC	8 cut(s)	107, 146, 769, 812, 971, 980, 989, 1026
BstNI	CCWGG	3 cut(s)	231, 322, 1380
BstNSI	RCATGY	3 cut(s)	492, 1292, 1360
BstSCI	CCNGG	5 cut(s)	216, 229, 320, 836, 1378
BstSFI	CTRYAG	3 cut(s)	558, 1164, 1252
BstSLI	GKGCMC	1 cut(s)	662
BstUI	CGCG	1 cut(s)	643
BstV1I	GCAGC	4 cut(s)	223, 544, 572, 786
BstX2I	RGATCY	2 cut(s)	698, 1309
BstYI	RGATCY	2 cut(s)	698, 1309
BstZ17I	GTATAC	1 cut(s)	730
Bsu15I	ATCGAT	1 cut(s)	105
BsuI	GTATCC	2 cut(s)	328, 1393
BsuRI	GGCC	2 cut(s)	55, 577
BsuTUI	ATCGAT	1 cut(s)	105
BtsCI	GGATG	5 cut(s)	190, 412, 544, 664, 712
BtsI	GCAGTG	1 cut(s)	1282
BtsIMutI	CAGTG	2 cut(s)	1270, 1282
Cac8I	GCNNGC	2 cut(s)	371, 1039
CaiI	CAGNNNCTG	1 cut(s)	1172
CfoI	GCGC	1 cut(s)	774
Cfr13I	GGNCC	1 cut(s)	1368
ClaI	ATCGAT	1 cut(s)	105
CseI	GACGC	1 cut(s)	796
Csp6I	GTAC	4 cut(s)	498, 518, 914, 947
CviAII	CATG	7 cut(s)	477, 489, 1132, 1289, 1352, 1357, 1434
CviQI	GTAC	4 cut(s)	498, 518, 914, 947
DdeI	CTNAG	7 cut(s)	242, 483, 720, 759, 1173, 1303, 1364
DpnI	GATC	4 cut(s)	700, 897, 957, 1311
DpnII	GATC	4 cut(s)	698, 895, 955, 1309
DraI	TTTAAA	1 cut(s)	436
DrdI	GACNNNNNNGTC	1 cut(s)	793
DseDI	GACNNNNNNGTC	1 cut(s)	793
Eam1104I	CTCTTC	1 cut(s)	528
EarI	CTCTTC	1 cut(s)	528
Eco130I	CCWWGG	1 cut(s)	339
Eco147I	AGGCCT	2 cut(s)	55, 577
Eco31I	GGTCTC	1 cut(s)	218
Eco47I	GGWCC	1 cut(s)	1368
Eco57I	CTGAAG	1 cut(s)	900
Eco88I	CYCGRG	1 cut(s)	1143
EcoRII	CCWGG	3 cut(s)	229, 320, 1378
EcoT14I	CCWWGG	1 cut(s)	339
EcoT22I	ATGCAT	1 cut(s)	112
ErhI	CCWWGG	1 cut(s)	339
FaeI	CATG	7 cut(s)	480, 492, 1135, 1292, 1355, 1360, 1437
FalI	AAGNNNNNCTT	2 cut(s)	43, 75
FaqI	GGGAC	1 cut(s)	799
FatI	CATG	7 cut(s)	476, 488, 1131, 1288, 1351, 1356, 1433
FauI	CCCGC	1 cut(s)	15
FblI	GTMKAC	1 cut(s)	729
Fnu4HI	GCNGC	5 cut(s)	237, 558, 561, 775, 1361
FokI	GGATG	5 cut(s)	177, 399, 551, 651, 719
Fsp4HI	GCNGC	5 cut(s)	237, 558, 561, 775, 1361
FspBI	CTAG	2 cut(s)	366, 1071
GlaI	GCGC	1 cut(s)	773
GluI	GCNGC	5 cut(s)	237, 558, 561, 775, 1361
GsuI	CTGGAG	3 cut(s)	990, 1005, 1219
HaeIII	GGCC	2 cut(s)	55, 577
HapII	CCGG	3 cut(s)	194, 218, 838
HgaI	GACGC	1 cut(s)	796
HhaI	GCGC	1 cut(s)	774
Hin1II	CATG	7 cut(s)	480, 492, 1135, 1292, 1355, 1360, 1437
Hin6I	GCGC	1 cut(s)	772
HinP1I	GCGC	1 cut(s)	772
HinfI	GANTC	6 cut(s)	187, 1014, 1096, 1169, 1231, 1299
HpaII	CCGG	3 cut(s)	194, 218, 838
HphI	GGTGA	2 cut(s)	105, 1196
Hpy166II	GTNNAC	2 cut(s)	660, 730
Hpy188III	TCNNGA	3 cut(s)	798, 824, 998
Hpy8I	GTNNAC	2 cut(s)	660, 730
HpyAV	CCTTC	6 cut(s)	253, 588, 682, 866, 875, 1210
HpyCH4III	ACNGT	4 cut(s)	166, 289, 331, 422
HpyF10VI	GCNNNNNNNGC	8 cut(s)	107, 146, 769, 812, 971, 980, 989, 1026
HpyF3I	CTNAG	7 cut(s)	242, 483, 720, 759, 1173, 1303, 1364
Hsp92II	CATG	7 cut(s)	480, 492, 1135, 1292, 1355, 1360, 1437
HspAI	GCGC	1 cut(s)	772
Kzo9I	GATC	4 cut(s)	698, 895, 955, 1309
LmnI	GCTCC	4 cut(s)	85, 782, 971, 1382
Lsp1109I	GCAGC	4 cut(s)	223, 544, 572, 786
LweI	GCATC	7 cut(s)	97, 119, 529, 802, 815, 1247, 1394
MaeI	CTAG	2 cut(s)	366, 1071
MaeIII	GTNAC	3 cut(s)	331, 632, 1247
MalI	GATC	4 cut(s)	700, 897, 957, 1311
MbiI	CCGCTC	1 cut(s)	22
MboI	GATC	4 cut(s)	698, 895, 955, 1309
MboII	GAAGA	3 cut(s)	120, 545, 1095
MflI	RGATCY	2 cut(s)	698, 1309
MhlI	GDGCHC	1 cut(s)	662
MluCI	AATT	4 cut(s)	247, 595, 670, 1003
MlyI	GAGTC	3 cut(s)	181, 1023, 1308
MmeI	TCCRAC	4 cut(s)	181, 379, 477, 889
Mph1103I	ATGCAT	1 cut(s)	112
MseI	TTAA	5 cut(s)	9, 72, 435, 858, 977
MslI	CAYNNNNRTG	2 cut(s)	858, 1350
MspA1I	CMGCKG	4 cut(s)	557, 1020, 1197, 1363
MspI	CCGG	3 cut(s)	194, 218, 838
MspR9I	CCNGG	5 cut(s)	218, 231, 322, 838, 1380
Mva1269I	GAATGC	2 cut(s)	922, 1031
MvaI	CCWGG	3 cut(s)	231, 322, 1380
MvnI	CGCG	1 cut(s)	643
MwoI	GCNNNNNNNGC	8 cut(s)	107, 146, 769, 812, 971, 980, 989, 1026
NciI	CCSGG	2 cut(s)	218, 838
NdeII	GATC	4 cut(s)	698, 895, 955, 1309
NlaIII	CATG	7 cut(s)	480, 492, 1135, 1292, 1355, 1360, 1437
NlaIV	GGNNCC	1 cut(s)	1311
NmuCI	GTSAC	1 cut(s)	632
NsiI	ATGCAT	1 cut(s)	112
NspI	RCATGY	3 cut(s)	492, 1292, 1360
PceI	AGGCCT	2 cut(s)	55, 577
PctI	GAATGC	2 cut(s)	922, 1031
PfeI	GAWTC	3 cut(s)	1096, 1169, 1231
PkrI	GCNGC	5 cut(s)	238, 559, 562, 776, 1362
PleI	GAGTC	3 cut(s)	181, 1022, 1307
PpsI	GAGTC	3 cut(s)	181, 1022, 1307
Psp6I	CCWGG	3 cut(s)	229, 320, 1378
PspGI	CCWGG	3 cut(s)	229, 320, 1378
PspN4I	GGNNCC	1 cut(s)	1311
PspPI	GGNCC	1 cut(s)	1368
PstI	CTGCAG	2 cut(s)	562, 1168
PstNI	CAGNNNCTG	1 cut(s)	1172
PsuI	RGATCY	2 cut(s)	698, 1309
PvuII	CAGCTG	1 cut(s)	557
RsaI	GTAC	4 cut(s)	499, 519, 915, 948
RsaNI	GTAC	4 cut(s)	498, 518, 914, 947
RseI	CAYNNNNRTG	2 cut(s)	858, 1350
SaqAI	TTAA	5 cut(s)	9, 72, 435, 858, 977
SatI	GCNGC	5 cut(s)	237, 558, 561, 775, 1361
Sau3AI	GATC	4 cut(s)	698, 895, 955, 1309
Sau96I	GGNCC	1 cut(s)	1368
SchI	GAGTC	3 cut(s)	181, 1023, 1308
ScrFI	CCNGG	5 cut(s)	218, 231, 322, 838, 1380
SduI	GDGCHC	1 cut(s)	662
SfaNI	GCATC	7 cut(s)	97, 119, 529, 802, 815, 1247, 1394
SfcI	CTRYAG	3 cut(s)	558, 1164, 1252
SinI	GGWCC	1 cut(s)	1368
SmiMI	CAYNNNNRTG	2 cut(s)	858, 1350
Sse9I	AATT	4 cut(s)	247, 595, 670, 1003
SseBI	AGGCCT	2 cut(s)	55, 577
SsiI	CCGC	6 cut(s)	22, 641, 1020, 1195, 1361, 1371
SspMI	CTAG	2 cut(s)	366, 1071
StuI	AGGCCT	2 cut(s)	55, 577
StyD4I	CCNGG	5 cut(s)	216, 229, 320, 836, 1378
StyI	CCWWGG	1 cut(s)	339
TaaI	ACNGT	4 cut(s)	166, 289, 331, 422
TaqI	TCGA	1 cut(s)	105
TasI	AATT	4 cut(s)	247, 595, 670, 1003
TatI	WGTACW	2 cut(s)	497, 946
TauI	GCSGC	1 cut(s)	1363
TfiI	GAWTC	3 cut(s)	1096, 1169, 1231
Tru1I	TTAA	5 cut(s)	9, 72, 435, 858, 977
Tru9I	TTAA	5 cut(s)	9, 72, 435, 858, 977
TscAI	CASTG	2 cut(s)	1270, 1282
TseFI	GTSAC	1 cut(s)	632
TseI	GCWGC	4 cut(s)	236, 557, 560, 774
Tsp45I	GTSAC	1 cut(s)	632
TspDTI	ATGAA	4 cut(s)	876, 885, 918, 1122
TspGWI	ACGGA	1 cut(s)	98
TspRI	CASTG	2 cut(s)	1270, 1282
VneI	GTGCAC	1 cut(s)	658
VpaK11BI	GGWCC	1 cut(s)	1368
XceI	RCATGY	3 cut(s)	492, 1292, 1360
XmiI	GTMKAC	1 cut(s)	729
XspI	CTAG	2 cut(s)	366, 1071
Zsp2I	ATGCAT	1 cut(s)	112

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.