Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0008031

Physical Location & Seq

Genomic Coordinates Forward (+)

13012949 .. 13023425

Gene Structure 10477 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g19470.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2742 bp

ATGGCTTGGACGGATAAAGATGTGTGTAATGGGAAAGATGCGGACCCAGTTGTAGAAAATGGATTCTTGAACTGTTCAGAGCCTTCTCCGAGTACCAGTGGCTCTCTTGCCGGTGCAACTGCGGAAAGGAAGAGTTTTGAAGTGAAGGAGACGATTTCTTATGCCAACATTCTTCGTTCAAGGAACAAGTTTTCTGATGCTCTTAGTCTTTATGAGACTGTGTTGGAGAAAGATGCCGGAAACGTAGAAGCTCATATTGGAAAAGGAATATGCCTGCAGATGAAGAATATGGGAAGGGTTGCTTTTGACAGTTTTATGGAAGCCATTAAGTTGGATCCAGAGAATGCATGTGCCCTCACACATTGTGGAATTTTGTACAAAGATGAGGGCCGCCTAAGGGAGGCTGCTGAGTCGTATCAAAAGGCTCTGAAAGCAGACCCTTCATATAAACCTGCTGCTGAATGCCTAGCCATTGTATTAACGGATCTTGGAACTAGCTTAAAGCTTGCTGGCAACACTCAAGATGGATTGCAGAAGTATTATGAAGCTCTGAAGACAGATCCGCACTACGCTCCTGCTTATTACAACCTTGGTGTTGTCTACTCTGAAATGATGCAATTTGACACCGCACTTACTTGCTATGAGAAGGCTGCATTAGAGAGGCCCATGTATGCTGAAGCATATTGTAACATGGGCGTTATTTACAAAAATCGTGGTGACTTGGAGTCTGCTATTGCTTGTTACGAGAGATGTCTAGCTGTTTCGCCAAACTTCGAGATTGCAAAGAATAATATGGCAATAGCCTTGACAGATTTAGGAACAAAGGTTAAGTTGGAGGGAGATATCGATCAAGGCATAGCATATTACAAGAAGGCTTTGTATTATAACTGGCATTATGCTGACGCAATGTACAATCTTGGGGTTGCTTATGGTGAAATGCTTAAGTTTGACATGGCAATTGTATTCTATGAACTCGCTTTCCACTTCAATCCCCATTGTGCAGAGGCATGCAATAATTTGGGAGTAATATACAAAGACCGAGACAACCTTGATAAAGCAGTAGAGTGTTATCAGTTGGCGTTGTCAATCAAACCAAATTTCTCACAGTCATTGAACAATCTTGGAGTTGTCTACACTGTTCAGGGTAAGATGGATGGTGCTGCAAGCATGATTGAGAAAGCTATAATTGCAAATCCCACATATGCGGAAGCATATAACAACTTAGGAGTTCTCTACAGAGATGCTGGCAATATCACTATGGCTATTGATGCATATGAGCAATGCCTTAAAATAGATCCTGATTCCCGAAATGCAGGCCAGAACCGATTGCTTGCAATGAACTACATTCATGAAGGGCATGATGATAAACTTTTTGTTGCTCACAGGGACTGGGGTAGACGCTTTATGAGGCTATTCTCACAGTACACGTCGTGGGACAATATAAAAGATCCGGAGCGACCCTTGGTGATTGGATATGTATCTCCTGATTATTTTACTCACTCTGTATCATATTTTATAGAAGCTCCCCTTGCCCACCATGAATATGCAAAGTACAAAGTGGTTGTTTATTCTGCAGTTGTGAAGGCAGATGCCAAGACTATCAGGTTTAGGGAGAGAGTCTTGAAAAAGGGTGGGATCTGGAGAGATATTTATGGGATTGATGAAAAAAAAGTTGCAAGCATTATTAAGGAAGATAAGGTGGATATATTGGTGGAACTTACTGGCCATACTGCTAACAATAAGTTGGGAACAATGGCATGCCGGCCTGCACCTGTTCAGGTTACTTGGATTGGTTACCCAAACACAACTGGTTTGCCAGCGATTGATTATAGAATAACAGATTCACTGGCAGATTCTACTGATTCAGAGCAGAAGCATGTTGAGGAGCTGGTTCGATTACCAGAATGCTTCCTTTGTTATACACCTTCCCCTGAGGCAGGGCCTGTTTCCCCTACTCCAGCTCTCTCCAATGGCTTTATTACATTTGGGAGCTTCAATAATCTCGCGAAGATCACACCAAAAGTGCTGCAAGTTTGGGCAAGAATTCTCTCAGCAATTCCGAACTCTCGCCTTGTAGTAAAATGTAAGCCCTTTAGTTGCGATAGTGTGAGAGAGAGATTTCTTTCAACATTGGAGCAGCTGGGGTTGGAACCTCTACGTGTTGATCTTCTGCCTCTAATTTTACTCAATTACGATCATATGCAAGCGTATTCTCTCATGGACATTAGTTTGGATACTTTTCCTTATGCCGGAACAACTACGACATGTGAATCTTTATATATGGGCGTTCCGTGTGTTACTATGGGTGGTTCAGTACATGCACACAATGTTGGTGTTAGTATTCTCAGCAAAGTGGGATTGGGGAACCTCATTGCTAAAAATGAGGAAGAGTATGTTCAGTTGGCTGTGCAGTTGGCCTCTGACATAACAGCACTTTCAAATTTGAGGATGAGTCTCCGAGACCTCATGTCCAGGTCGCCTGTCTGTGATGGACCAAAGTTTACCCTTGGGCTGGAGTCGGCATACAGGAACATGTGGCGCAGGTACTGCAAAGGTGATGTGCCATCAAAACGGCACATGGAAATGCTACAACAGGAGGTATCCCCTGAGGAGCCTGGTACCAAAATCGCTGAACCAATAAGAATTACTGCTTCAGGTTCTTTTACCTCTATCAAGTCCAATGGATTCACTCCTTCAACACCTATGCCTAATCTCTGTTCTTCTGAAGAAAATGGAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0007154 GO:0007165 GO:0008150 GO:0008194 GO:0008375 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009739 GO:0009740 GO:0009755 GO:0009937 GO:0009938 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010476 GO:0010646 GO:0010648 GO:0016262 GO:0016740 GO:0016757 GO:0016758 GO:0019222 GO:0023051 GO:0023052 GO:0023057 GO:0031323 GO:0032870 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071368 GO:0071370 GO:0071396 GO:0071495 GO:0140096 GO:1901700 GO:1901701 GO:2000377

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_transf_41 TPR_1 TPR_10 TPR_16 TPR_7 TPR_8

Protein Analysis

914

Amino Acids

101.52

Weight (kDa)

5.65

Isoelectric Point (pI)

40.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_1	PF00515	191 - 217	6.4e-07	Tetratricopeptide repeat
TPR_1	PF00515	225 - 258	8.3e-10	Tetratricopeptide repeat
TPR_2	PF07719	225 - 257	8.5e-07	Tetratricopeptide repeat
TPR_8	PF13181	225 - 257	6.9e-08	Tetratricopeptide repeat
TPR_12	PF13424	225 - 293	1e-06	Tetratricopeptide repeat
TPR_1	PF00515	334 - 367	4.2e-09	Tetratricopeptide repeat
TPR_2	PF07719	334 - 366	2.2e-06	Tetratricopeptide repeat
TPR_8	PF13181	334 - 366	1e-06	Tetratricopeptide repeat
TPR_11	PF13414	343 - 381	5.8e-06	TPR repeat
TPR_12	PF13424	369 - 432	1.3e-07	Tetratricopeptide repeat
TPR_1	PF00515	402 - 434	1.2e-09	Tetratricopeptide repeat
TPR_2	PF07719	402 - 434	3.3e-07	Tetratricopeptide repeat
TPR_8	PF13181	402 - 434	8.7e-08	Tetratricopeptide repeat
Glyco_transf_41	PF13844	478 - 638	2.8e-23	Glycosyl transferase family 41
Glyco_transf_41	PF13844	655 - 834	1.3e-24	Glycosyl transferase family 41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0008031)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G11540 AT3G11540
fragaria_vesca	FvH4_6g19470 FvH4_6g19470 FvH4_6g19470 FvH4_6g19470
malus_domestica	MD12G1030800.v1.1 MD14G1031300.v1.1
prunus_persica	Prupe.7G101600_v2.0.a1 Prupe.7G101600_v2.0.a1
pyrus_communis	pycom12g02880 pycom14g02820
rosa_chinensis	RchiOBHm_Chr3g0474801
rosa_laevigata	RLG00000023896
rosa_multiflora	Rmu_sc0004848.1_g000005
rosa_roxburghii	Rroxscaffold_6G00406850
rosa_rugosa	Rorug03G0143700 Rorug03G0143800 Rorug03G0143900
rosa_samantha	Rh3AG193600 Rh3BG223400 Rh3CG218300 Rh3DG219400
rosa_wichuraiana	Rw3G017640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	885
Acc36I	ACCTGC	2 cut(s)	460, 2532
Acc65I	GGTACC	1 cut(s)	2618
AccB1I	GGYRCC	1 cut(s)	2618
AccI	GTMKAC	3 cut(s)	600, 1131, 1396
AccII	CGCG	1 cut(s)	2006
AccIII	TCCGGA	1 cut(s)	1450
AciI	CCGC	6 cut(s)	41, 122, 391, 563, 627, 1205
AclWI	GGATC	7 cut(s)	329, 342, 492, 554, 1289, 1442, 1643
AcoI	YGGCCR	1 cut(s)	1723
AcsI	RAATTY	4 cut(s)	369, 1096, 2043, 2440
AcuI	CTGAAG	3 cut(s)	572, 696, 2637
AdeI	CACNNNGTG	2 cut(s)	365, 1431
AfaI	GTAC	8 cut(s)	94, 377, 911, 1424, 1553, 2316, 2546, 2620
AfiI	CCNNNNNNNGG	5 cut(s)	397, 400, 1937, 2249, 2512
AflII	CTTAAG	1 cut(s)	941
AflIII	ACRYGT	4 cut(s)	1425, 2158, 2264, 2532
AhdI	GACNNNNNGTC	2 cut(s)	724, 2467
AjiI	CACGTC	1 cut(s)	1428
AjnI	CCWGG	2 cut(s)	2471, 2614
AjuI	GAANNNNNNNTTGG	2 cut(s)	240, 272
AloI	GAACNNNNNNTCC	2 cut(s)	963, 995
Alw26I	GTCTC	5 cut(s)	143, 209, 1035, 2454, 2459
AlwI	GGATC	7 cut(s)	329, 342, 492, 554, 1289, 1442, 1643
AlwNI	CAGNNNCTG	3 cut(s)	1389, 1943, 2547
Aor13HI	TCCGGA	1 cut(s)	1450
AoxI	GGCC	7 cut(s)	388, 662, 1315, 1723, 1763, 1940, 2415
ApeKI	GCWGC	6 cut(s)	404, 455, 650, 1160, 2026, 2137
ApoI	RAATTY	4 cut(s)	369, 1096, 2043, 2440
Asp718I	GGTACC	1 cut(s)	2618
AspLEI	GCGC	1 cut(s)	2541
AspS9I	GGNCC	5 cut(s)	43, 388, 663, 1940, 2492
AsuHPI	GGTGA	4 cut(s)	728, 944, 1477, 2567
AvaII	GGWCC	2 cut(s)	43, 2492
AxyI	CCTNAGG	3 cut(s)	395, 1932, 2607
BaeGI	GKGCMC	1 cut(s)	355
BalI	TGGCCA	1 cut(s)	1725
BamHI	GGATCC	1 cut(s)	334
BanI	GGYRCC	1 cut(s)	2618
BbsI	GAAGAC	1 cut(s)	560
BbvI	GCAGC	6 cut(s)	391, 442, 637, 1147, 2013, 2149
BccI	CCATC	5 cut(s)	518, 1144, 1148, 2483, 2572
BceAI	ACGGC	1 cut(s)	2588
BciT130I	CCWGG	2 cut(s)	2473, 2616
BciVI	GTATCC	2 cut(s)	2227, 2611
BcoDI	GTCTC	5 cut(s)	143, 209, 1035, 2454, 2459
BfaI	CTAG	3 cut(s)	467, 495, 755
BfmI	CTRYAG	3 cut(s)	275, 1234, 1572
BfrI	CTTAAG	1 cut(s)	941
BfuAI	ACCTGC	2 cut(s)	460, 2532
BfuI	GTATCC	2 cut(s)	2227, 2611
BisI	GCNGC	7 cut(s)	391, 405, 456, 651, 1161, 2027, 2138
BlsI	GCNGC	7 cut(s)	392, 406, 457, 652, 1162, 2028, 2139
Bme1390I	CCNGG	2 cut(s)	2473, 2616
Bme18I	GGWCC	2 cut(s)	43, 2492
BmeRI	GACNNNNNGTC	2 cut(s)	724, 2467
BmgBI	CACGTC	1 cut(s)	1428
BmgT120I	GGNCC	5 cut(s)	43, 388, 663, 1940, 2492
BmiI	GGNNCC	6 cut(s)	45, 336, 2151, 2366, 2613, 2620
BmrFI	CCNGG	2 cut(s)	2473, 2616
BmrI	ACTGGG	2 cut(s)	41, 1399
BmsI	GCATC	7 cut(s)	28, 187, 223, 603, 1231, 1258, 1579
BmuI	ACTGGG	2 cut(s)	41, 1399
BpiI	GAAGAC	1 cut(s)	560
BpmI	CTGGAG	3 cut(s)	1660, 1941, 2534
BpuEI	CTTGAG	1 cut(s)	504
Bsa29I	ATCGAT	1 cut(s)	846
BsaAI	YACGTR	1 cut(s)	2159
BsaBI	GATNNNNATC	2 cut(s)	846, 1477
BsaI	GGTCTC	1 cut(s)	2454
BsaJI	CCNNGG	3 cut(s)	589, 1461, 2506
BsaWI	WCCGGW	1 cut(s)	1450
Bsc4I	CCNNNNNNNGG	5 cut(s)	397, 400, 1937, 2249, 2512
Bse118I	RCCGGY	2 cut(s)	110, 1761
Bse1I	ACTGG	7 cut(s)	47, 96, 893, 1394, 1726, 1813, 1851
Bse21I	CCTNAGG	3 cut(s)	395, 1932, 2607
Bse3DI	GCAATG	4 cut(s)	912, 1286, 1341, 2370
Bse8I	GATNNNNATC	2 cut(s)	846, 1477
BseAI	TCCGGA	1 cut(s)	1450
BseBI	CCWGG	2 cut(s)	2473, 2616
BseCI	ATCGAT	1 cut(s)	846
BseDI	CCNNGG	3 cut(s)	589, 1461, 2506
BseGI	GGATG	2 cut(s)	1159, 2454
BseJI	GATNNNNATC	2 cut(s)	846, 1477
BseLI	CCNNNNNNNGG	5 cut(s)	397, 400, 1937, 2249, 2512
BseMI	GCAATG	4 cut(s)	912, 1286, 1341, 2370
BseMII	CTCAG	5 cut(s)	399, 1923, 2064, 2359, 2598
BseNI	ACTGG	7 cut(s)	47, 96, 893, 1394, 1726, 1813, 1851
BseRI	GAGGAG	2 cut(s)	1898, 2624
BseSI	GKGCMC	1 cut(s)	355
BseXI	GCAGC	6 cut(s)	391, 442, 637, 1147, 2013, 2149
BseYI	CCCAGC	1 cut(s)	2140
BsgI	GTGCAG	3 cut(s)	1020, 1752, 2429
Bsh1236I	CGCG	1 cut(s)	2006
BshFI	GGCC	7 cut(s)	390, 664, 1317, 1725, 1765, 1942, 2417
BshNI	GGYRCC	1 cut(s)	2618
BshVI	ATCGAT	1 cut(s)	846
BsiSI	CCGG	5 cut(s)	111, 237, 1451, 1762, 2250
BslFI	GGGAC	2 cut(s)	1400, 1448
BslI	CCNNNNNNNGG	5 cut(s)	397, 400, 1937, 2249, 2512
BsmAI	GTCTC	5 cut(s)	143, 209, 1035, 2454, 2459
BsmBI	CGTCTC	1 cut(s)	143
BsmFI	GGGAC	2 cut(s)	1400, 1448
BsmI	GAATGC	3 cut(s)	349, 467, 1910
BsnI	GGCC	7 cut(s)	390, 664, 1317, 1725, 1765, 1942, 2417
Bso31I	GGTCTC	1 cut(s)	2454
Bsp1286I	GDGCHC	1 cut(s)	355
Bsp13I	TCCGGA	1 cut(s)	1450
Bsp1407I	TGTACA	2 cut(s)	375, 909
Bsp68I	TCGCGA	1 cut(s)	2006
BspACI	CCGC	6 cut(s)	41, 122, 391, 563, 627, 1205
BspANI	GGCC	7 cut(s)	390, 664, 1317, 1725, 1765, 1942, 2417
BspCNI	CTCAG	5 cut(s)	400, 1924, 2063, 2358, 2599
BspDI	ATCGAT	1 cut(s)	846
BspEI	TCCGGA	1 cut(s)	1450
BspFNI	CGCG	1 cut(s)	2006
BspHI	TCATGA	1 cut(s)	1348
BspLI	GGNNCC	6 cut(s)	45, 336, 2151, 2366, 2613, 2620
BspMAI	CTGCAG	2 cut(s)	279, 1576
BspMI	ACCTGC	2 cut(s)	460, 2532
BspPI	GGATC	7 cut(s)	329, 342, 492, 554, 1289, 1442, 1643
BspT107I	GGYRCC	1 cut(s)	2618
BspTI	CTTAAG	1 cut(s)	941
BspTNI	GGTCTC	1 cut(s)	2454
BsrDI	GCAATG	4 cut(s)	912, 1286, 1341, 2370
BsrFI	RCCGGY	2 cut(s)	110, 1761
BsrGI	TGTACA	2 cut(s)	375, 909
BsrI	ACTGG	7 cut(s)	47, 96, 893, 1394, 1726, 1813, 1851
BssAI	RCCGGY	2 cut(s)	110, 1761
BssECI	CCNNGG	3 cut(s)	589, 1461, 2506
BssT1I	CCWWGG	3 cut(s)	589, 1461, 2506
Bst2UI	CCWGG	2 cut(s)	2473, 2616
Bst4CI	ACNGT	6 cut(s)	74, 220, 311, 1107, 1138, 1422
Bst6I	CTCTTC	2 cut(s)	125, 2382
BstAFI	CTTAAG	1 cut(s)	941
BstAPI	GCANNNNNTGC	1 cut(s)	2547
BstAUI	TGTACA	2 cut(s)	375, 909
BstBAI	YACGTR	1 cut(s)	2159
BstDEI	CTNAG	8 cut(s)	203, 395, 408, 1222, 1932, 2050, 2345, 2607
BstEII	GGTNACC	1 cut(s)	1793
BstENI	CCTNNNNNAGG	2 cut(s)	398, 1935
BstF5I	GGATG	2 cut(s)	1159, 2454
BstFNI	CGCG	1 cut(s)	2006
BstHHI	GCGC	1 cut(s)	2541
BstMAI	GTCTC	5 cut(s)	143, 209, 1035, 2454, 2459
BstMWI	GCNNNNNNNGC	5 cut(s)	431, 1187, 1268, 1529, 2547
BstNI	CCWGG	2 cut(s)	2473, 2616
BstNSI	RCATGY	7 cut(s)	351, 1011, 1761, 1880, 2268, 2321, 2536
BstPI	GGTNACC	1 cut(s)	1793
BstSCI	CCNGG	2 cut(s)	2471, 2614
BstSFI	CTRYAG	3 cut(s)	275, 1234, 1572
BstSLI	GKGCMC	1 cut(s)	355
BstUI	CGCG	1 cut(s)	2006
BstV1I	GCAGC	6 cut(s)	391, 442, 637, 1147, 2013, 2149
BstV2I	GAAGAC	1 cut(s)	560
BstX2I	RGATCY	6 cut(s)	334, 484, 559, 1294, 1447, 1635
BstXI	CCANNNNNNTGG	1 cut(s)	331
BstYI	RGATCY	6 cut(s)	334, 484, 559, 1294, 1447, 1635
Bsu15I	ATCGAT	1 cut(s)	846
Bsu36I	CCTNAGG	3 cut(s)	395, 1932, 2607
BsuI	GTATCC	2 cut(s)	2227, 2611
BsuRI	GGCC	7 cut(s)	390, 664, 1317, 1725, 1765, 1942, 2417
BsuTUI	ATCGAT	1 cut(s)	846
BtrI	CACGTC	1 cut(s)	1428
BtsCI	GGATG	2 cut(s)	1159, 2454
BtsIMutI	CAGTG	3 cut(s)	103, 1134, 1844
BtuMI	TCGCGA	1 cut(s)	2006
BveI	ACCTGC	2 cut(s)	460, 2532
CaiI	CAGNNNCTG	3 cut(s)	1389, 1943, 2547
CciI	TCATGA	1 cut(s)	1348
CfoI	GCGC	1 cut(s)	2541
Cfr10I	RCCGGY	2 cut(s)	110, 1761
Cfr13I	GGNCC	5 cut(s)	43, 388, 663, 1940, 2492
ClaI	ATCGAT	1 cut(s)	846
CseI	GACGC	2 cut(s)	911, 1407
Csp6I	GTAC	8 cut(s)	93, 376, 910, 1423, 1552, 2315, 2545, 2619
CspCI	CAANNNNNGTGG	2 cut(s)	694, 729
CviQI	GTAC	8 cut(s)	93, 376, 910, 1423, 1552, 2315, 2545, 2619
DdeI	CTNAG	8 cut(s)	203, 395, 408, 1222, 1932, 2050, 2345, 2607
DraIII	CACNNNGTG	2 cut(s)	365, 1431
DriI	GACNNNNNGTC	2 cut(s)	724, 2467
EaeI	YGGCCR	1 cut(s)	1723
Eam1104I	CTCTTC	2 cut(s)	125, 2382
Eam1105I	GACNNNNNGTC	2 cut(s)	724, 2467
EarI	CTCTTC	2 cut(s)	125, 2382
Eco130I	CCWWGG	3 cut(s)	589, 1461, 2506
Eco31I	GGTCTC	1 cut(s)	2454
Eco32I	GATATC	1 cut(s)	844
Eco47I	GGWCC	2 cut(s)	43, 2492
Eco57I	CTGAAG	3 cut(s)	572, 696, 2637
Eco81I	CCTNAGG	3 cut(s)	395, 1932, 2607
Eco91I	GGTNACC	1 cut(s)	1793
EcoNI	CCTNNNNNAGG	2 cut(s)	398, 1935
EcoO109I	RGGNCCY	1 cut(s)	1940
EcoO65I	GGTNACC	1 cut(s)	1793
EcoRI	GAATTC	1 cut(s)	2043
EcoRII	CCWGG	2 cut(s)	2471, 2614
EcoRV	GATATC	1 cut(s)	844
EcoT14I	CCWWGG	3 cut(s)	589, 1461, 2506
EcoT22I	ATGCAT	2 cut(s)	349, 1273
ErhI	CCWWGG	3 cut(s)	589, 1461, 2506
Esp3I	CGTCTC	1 cut(s)	143
FalI	AAGNNNNNCTT	4 cut(s)	286, 318, 1512, 1544
FaqI	GGGAC	2 cut(s)	1400, 1448
FauNDI	CATATG	3 cut(s)	1201, 1273, 2199
FblI	GTMKAC	3 cut(s)	600, 1131, 1396
Fnu4HI	GCNGC	7 cut(s)	391, 405, 456, 651, 1161, 2027, 2138
FokI	GGATG	2 cut(s)	1166, 2461
Fsp4HI	GCNGC	7 cut(s)	391, 405, 456, 651, 1161, 2027, 2138
FspBI	CTAG	3 cut(s)	467, 495, 755
GlaI	GCGC	1 cut(s)	2540
GluI	GCNGC	7 cut(s)	391, 405, 456, 651, 1161, 2027, 2138
GsaI	CCCAGC	1 cut(s)	2144
GsuI	CTGGAG	3 cut(s)	1660, 1941, 2534
HaeIII	GGCC	7 cut(s)	390, 664, 1317, 1725, 1765, 1942, 2417
HapII	CCGG	5 cut(s)	111, 237, 1451, 1762, 2250
HgaI	GACGC	2 cut(s)	911, 1407
HhaI	GCGC	1 cut(s)	2541
Hin6I	GCGC	1 cut(s)	2539
HinP1I	GCGC	1 cut(s)	2539
HindIII	AAGCTT	1 cut(s)	503
HpaII	CCGG	5 cut(s)	111, 237, 1451, 1762, 2250
HphI	GGTGA	4 cut(s)	728, 944, 1477, 2567
Hpy166II	GTNNAC	5 cut(s)	601, 1132, 1397, 1425, 2502
Hpy8I	GTNNAC	5 cut(s)	601, 1132, 1397, 1425, 2502
Hpy99I	CGWCG	1 cut(s)	1432
HpyCH4III	ACNGT	6 cut(s)	74, 220, 311, 1107, 1138, 1422
HpyCH4IV	ACGT	3 cut(s)	243, 1427, 2158
HpyF10VI	GCNNNNNNNGC	5 cut(s)	431, 1187, 1268, 1529, 2547
HpyF3I	CTNAG	8 cut(s)	203, 395, 408, 1222, 1932, 2050, 2345, 2607
HpySE526I	ACGT	3 cut(s)	243, 1427, 2158
HspAI	GCGC	1 cut(s)	2539
Kpn2I	TCCGGA	1 cut(s)	1450
KpnI	GGTACC	1 cut(s)	2622
KroI	GCCGGC	1 cut(s)	1761
KroNI	GCCGGC	1 cut(s)	1763
LmnI	GCTCC	7 cut(s)	577, 1453, 1528, 1885, 1989, 2134, 2611
Lsp1109I	GCAGC	6 cut(s)	391, 442, 637, 1147, 2013, 2149
LweI	GCATC	7 cut(s)	28, 187, 223, 603, 1231, 1258, 1579
MaeI	CTAG	3 cut(s)	467, 495, 755
MaeII	ACGT	3 cut(s)	243, 1427, 2158
MaeIII	GTNAC	6 cut(s)	686, 716, 740, 1780, 1793, 2296
MfeI	CAATTG	1 cut(s)	957
MflI	RGATCY	6 cut(s)	334, 484, 559, 1294, 1447, 1635
MhlI	GDGCHC	1 cut(s)	355
MlsI	TGGCCA	1 cut(s)	1725
MluNI	TGGCCA	1 cut(s)	1725
MlyI	GAGTC	5 cut(s)	419, 734, 1626, 2461, 2525
MmeI	TCCRAC	4 cut(s)	204, 312, 813, 2127
Mox20I	TGGCCA	1 cut(s)	1725
Mph1103I	ATGCAT	2 cut(s)	349, 1273
MroI	TCCGGA	1 cut(s)	1450
MroNI	GCCGGC	1 cut(s)	1761
MscI	TGGCCA	1 cut(s)	1725
MseI	TTAA	7 cut(s)	327, 479, 500, 828, 942, 1287, 1686
MslI	CAYNNNNRTG	2 cut(s)	1542, 2582
Msp20I	TGGCCA	1 cut(s)	1725
MspA1I	CMGCKG	1 cut(s)	2140
MspCI	CTTAAG	1 cut(s)	941
MspI	CCGG	5 cut(s)	111, 237, 1451, 1762, 2250
MspR9I	CCNGG	2 cut(s)	2473, 2616
MunI	CAATTG	1 cut(s)	957
Mva1269I	GAATGC	3 cut(s)	349, 467, 1910
MvaI	CCWGG	2 cut(s)	2473, 2616
MvnI	CGCG	1 cut(s)	2006
MwoI	GCNNNNNNNGC	5 cut(s)	431, 1187, 1268, 1529, 2547
NaeI	GCCGGC	1 cut(s)	1763
NdeI	CATATG	3 cut(s)	1201, 1273, 2199
NgoMIV	GCCGGC	1 cut(s)	1761
NlaIV	GGNNCC	6 cut(s)	45, 336, 2151, 2366, 2613, 2620
NmuCI	GTSAC	1 cut(s)	716
NruI	TCGCGA	1 cut(s)	2006
NsiI	ATGCAT	2 cut(s)	349, 1273
NspI	RCATGY	7 cut(s)	351, 1011, 1761, 1880, 2268, 2321, 2536
PaeI	GCATGC	2 cut(s)	1011, 1761
PagI	TCATGA	1 cut(s)	1348
PciI	ACATGT	2 cut(s)	2264, 2532
PctI	GAATGC	3 cut(s)	349, 467, 1910
PdiI	GCCGGC	1 cut(s)	1763
PfeI	GAWTC	7 cut(s)	63, 1301, 1841, 1853, 1862, 2270, 2685
PkrI	GCNGC	7 cut(s)	392, 406, 457, 652, 1162, 2028, 2139
PleI	GAGTC	5 cut(s)	418, 733, 1625, 2460, 2524
PpsI	GAGTC	5 cut(s)	418, 733, 1625, 2460, 2524
Ppu21I	YACGTR	1 cut(s)	2159
PscI	ACATGT	2 cut(s)	2264, 2532
PsiI	TTATAA	1 cut(s)	885
Psp6I	CCWGG	2 cut(s)	2471, 2614
PspEI	GGTNACC	1 cut(s)	1793
PspFI	CCCAGC	1 cut(s)	2140
PspGI	CCWGG	2 cut(s)	2471, 2614
PspN4I	GGNNCC	6 cut(s)	45, 336, 2151, 2366, 2613, 2620
PspPI	GGNCC	5 cut(s)	43, 388, 663, 1940, 2492
PstI	CTGCAG	2 cut(s)	279, 1576
PstNI	CAGNNNCTG	3 cut(s)	1389, 1943, 2547
PsuI	RGATCY	6 cut(s)	334, 484, 559, 1294, 1447, 1635
PvuII	CAGCTG	1 cut(s)	2140
RruI	TCGCGA	1 cut(s)	2006
RsaI	GTAC	8 cut(s)	94, 377, 911, 1424, 1553, 2316, 2546, 2620
RsaNI	GTAC	8 cut(s)	93, 376, 910, 1423, 1552, 2315, 2545, 2619
RseI	CAYNNNNRTG	2 cut(s)	1542, 2582
SaqAI	TTAA	7 cut(s)	327, 479, 500, 828, 942, 1287, 1686
SatI	GCNGC	7 cut(s)	391, 405, 456, 651, 1161, 2027, 2138
Sau96I	GGNCC	5 cut(s)	43, 388, 663, 1940, 2492
SchI	GAGTC	5 cut(s)	419, 734, 1626, 2461, 2525
ScrFI	CCNGG	2 cut(s)	2473, 2616
SduI	GDGCHC	1 cut(s)	355
SfaNI	GCATC	7 cut(s)	28, 187, 223, 603, 1231, 1258, 1579
SfcI	CTRYAG	3 cut(s)	275, 1234, 1572
SinI	GGWCC	2 cut(s)	43, 2492
SmiMI	CAYNNNNRTG	2 cut(s)	1542, 2582
SmlI	CTYRAG	2 cut(s)	519, 941
SmoI	CTYRAG	2 cut(s)	519, 941
SphI	GCATGC	2 cut(s)	1011, 1761
SsiI	CCGC	6 cut(s)	41, 122, 391, 563, 627, 1205
SspMI	CTAG	3 cut(s)	467, 495, 755
StyD4I	CCNGG	2 cut(s)	2471, 2614
StyI	CCWWGG	3 cut(s)	589, 1461, 2506
TaaI	ACNGT	6 cut(s)	74, 220, 311, 1107, 1138, 1422
TaiI	ACGT	3 cut(s)	246, 1430, 2161
TaqI	TCGA	3 cut(s)	774, 846, 1894
TaqII	GACCGA	1 cut(s)	1053
TatI	WGTACW	5 cut(s)	375, 909, 1422, 1551, 2314
TauI	GCSGC	1 cut(s)	393
TfiI	GAWTC	7 cut(s)	63, 1301, 1841, 1853, 1862, 2270, 2685
Tru1I	TTAA	7 cut(s)	327, 479, 500, 828, 942, 1287, 1686
Tru9I	TTAA	7 cut(s)	327, 479, 500, 828, 942, 1287, 1686
TscAI	CASTG	3 cut(s)	103, 1141, 1851
TseFI	GTSAC	1 cut(s)	716
TseI	GCWGC	6 cut(s)	404, 455, 650, 1160, 2026, 2137
Tsp45I	GTSAC	1 cut(s)	716
TspDTI	ATGAA	9 cut(s)	296, 432, 558, 984, 1337, 1352, 1365, 1554, 1677
TspGWI	ACGGA	3 cut(s)	26, 497, 2280
TspRI	CASTG	3 cut(s)	103, 1141, 1851
Vha464I	CTTAAG	1 cut(s)	941
VpaK11BI	GGWCC	2 cut(s)	43, 2492
XagI	CCTNNNNNAGG	2 cut(s)	398, 1935
XapI	RAATTY	4 cut(s)	369, 1096, 2043, 2440
XceI	RCATGY	7 cut(s)	351, 1011, 1761, 1880, 2268, 2321, 2536
XmiI	GTMKAC	3 cut(s)	600, 1131, 1396
XspI	CTAG	3 cut(s)	467, 495, 755
Zsp2I	ATGCAT	2 cut(s)	349, 1273

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.