FvH4_6g24280

exocyst complex component

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0002387
Physical Location & Seq
Reverse (-)
18311493 .. 18327756
16264 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g24280.t2

Sequence Viewer

Length: 2271 bp
ATGATGGTTGAGGATCTCGGTGTGGAAGCCAAGGAGGCTGCGGTGCGCGAGGTTGCGAAGCTCTTGCCTCTGCCAGAGCTTCTTCAGTCTATCGCTTCCATCAAGGCCGATTACATTGCTCGCCAACAGGCAAATGATGCACAACTTAGTACAATGGTTGCCGAGCAGGTAGAACAAGCACAAACTGGGCTGGAGTCCCTGTCCTTATCTCAAAAATCAATAAACCAACTCCGTGAAAACTTTGTTTCTATTGAAAAGCTATGTCAAGAATGCCAAACTTTGATTGAAAACCATGATCAGATAAAGCTTCTCAGCAATGCGAGAAACAACTTAAATACAACCTTAAAGGATGTCGAGGGTATGATGTCGATCTCTGTTGAAGCCTCTGAGGCTCGGGCTTCTTTAAGTGATGATAAAGAACTCATTAATACTTATGAGAGGTTAACAGCTCTTGATGGAAAGAGGAGGTTTGCATTAGCAGCTGCTGGATCTCACAAGGAAGAAGTTGGCAGGCTAAGAGAATATTTTGAAGATGTTGATAGAACCTGGGAGACATTTGAGAAGACGTTATGGGGTCATGTTTCAAACTTCTATAATCTTTCCAAAGAAAGCCCGCAAACTCTGGTCCGCGCTTTAAGGGTTGTTGAAATGCAAGAAATCCTTGACCAACAACTTGCTGAAGAAGCAGCAGAGGCTGAGGGAGGCGGTGCCATGGCATCAATTGCCAATCCTCGTAGAACTGCCAAAAAAACTACCACAGCAACAGCGTCTTCGAGAAATCTGACACAGCAGAAAATGAATGGTAATGGCAAAGGCTACAAGGACAAATGTTATGAGCAAATTAGGAAGACTGTTGAAGGACGATTCAACAAGCTACTGACAGAGCTTTGTTATGAGGATCTTAAAGCAGCACTTGAGGAAGCTCGAGCGATTGGAGAAGAGCTTGGAGATATATACGACCATGTTGCCCCTTGTTTTCCCCCCAGATATGAAATATTTCAGCTCATGGTCAATCTGTATACCGAGAGATTTGTTCAAATGCTTAGATTACTCAGTGACAGGGCAAATGAAATGACAAACATAGAGATCTTAAAGGTAACTGGTTGGGTAGTTGAATACCAAGAAAATTTGATTGGGCTTGGGGTTGATGAATCTCTTGCTCAAGTATGTTCTGAGAGTGGTTCCATGGATCCCCTTATGAATTCCTATGTGGAGAGAATGCAAGCTACGACAAGGAAATGGTACTTGAATATCTTGGAGGCTGATAAGGTACAGCCACCGAAGAAAACAGAAGATGGGAAGCTATACACGCCAGCTGCTGTTGACTTATTCAGGATTCTTGGAGAGCAAGTGCAAATAGTTCGCGATAATAGCACGGATCTCATGCTCTACAGAATTGCTTTAGCAATTATCCAGGTAATGATTGATTTTCAAGCTGCTGAAAGGAAGAGACTTGAGGAACCTGCTTCAGAAGTGGGTTTGGAACCCTTATGTGCAATGATTAACAACAATCTGCGATGCTACGATCTCGCAATGGAGCTTAGTAATAGCACTCTGGAAGCTCTTCCACAAAACTATGCTGAGCAGGTTAACTTTGAAGATACATGCAAAGGTTTCCTAGAGGTTGCGAAGGAAGCTGTGCACCAAACTGTCAGTGTTATATTTGAAGATCCCGGAGTGCAGGATTTACTTGTGAAGCTTTATCAGAAGGAGTGGTGCGAGGGACAGGTTACCGAGTATCTTGTTGCAACATTTGGTGATTATTTTACAGATGTAAAGATGTATATTGAAGAAAGATCATTTAGGAGATTTGTTGAGGCTTGTCTGGAGGAAACTGTGGTTGTATATGTTGACCGTCTTCTCACACAGAAAAACTATATAAAGGAAGAGACCATTGAAAGGATGAGACTGGATGAAGAGGTTCTCATGGACTTTTTTAGGGAGTATTTAAGTGTTTCTAAAGTAGAAAGCAGAGTCAGAATACTGAGTGATTTGAGAGAACTTGCTTCAGCAGAGAGCCTGGATACATTCACACTGATTTACACAAATATTCTTGAACATCAACCTGATTGTCCGCCTGAGGTAGTGGAGAAGCTTGTCGCACTACGAGAAGGCATACCGCGGAAGGATGCTAAGGAGGTTGTACAAGAGTGCAAGGAGATATATGAGAATTCTCTCGTCAATGGAACCCCTGCCAAAGCAGGTTTTGTATTTCCAAGAGTTAAGTGCTTATTGTCTGCCAAGGCATCGATATGGCGAAAACTAACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Sec6

Protein Analysis

757

Amino Acids

86.05

Weight (kDa)

4.86

Isoelectric Point (pI)

38.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sec6 PF06046 1 - 373 1.6e-85 Exocyst complex component Sec6
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 4 cut(s) 157, 1471, 1576, 2192
AccB1I GGYRCC 1 cut(s) 707
AccI GTMKAC 1 cut(s) 1019
AccII CGCG 4 cut(s) 48, 630, 1365, 2122
AciI CCGC 7 cut(s) 41, 614, 628, 705, 2075, 2120, 2122
AclWI GGATC 7 cut(s) 21, 496, 906, 1184, 1197, 1386, 1664
AcsI RAATTY 3 cut(s) 1126, 1201, 2170
AcuI CTGAAG 4 cut(s) 68, 699, 1452, 1992
AfaI GTAC 4 cut(s) 151, 1244, 1272, 2145
AfiI CCNNNNNNNGG 1 cut(s) 1899
AjnI CCWGG 3 cut(s) 545, 1413, 2019
AjuI GAANNNNNNNTTGG 2 cut(s) 1116, 1148
Alw21I GWGCWC 1 cut(s) 1644
Alw26I GTCTC 4 cut(s) 545, 1444, 1883, 1900
Alw44I GTGCAC 1 cut(s) 1640
AlwI GGATC 7 cut(s) 21, 496, 906, 1184, 1197, 1386, 1664
AlwNI CAGNNNCTG 3 cut(s) 485, 695, 1319
Ama87I CYCGRG 2 cut(s) 393, 924
AoxI GGCC 1 cut(s) 105
ApaLI GTGCAC 1 cut(s) 1640
ApeKI GCWGC 7 cut(s) 38, 479, 482, 686, 908, 1316, 1436
ApoI RAATTY 3 cut(s) 1126, 1201, 2170
AseI ATTAAT 1 cut(s) 426
Asp700I GAANNNNTTC 3 cut(s) 996, 1563, 1920
AspLEI GCGC 2 cut(s) 48, 632
AspS9I GGNCC 1 cut(s) 625
AsuC2I CCSGG 1 cut(s) 1674
AsuHPI GGTGA 1 cut(s) 1769
AvaI CYCGRG 2 cut(s) 393, 924
AvaII GGWCC 1 cut(s) 625
AxyI CCTNAGG 1 cut(s) 2079
BaeGI GKGCMC 1 cut(s) 1644
BamHI GGATCC 1 cut(s) 1189
BanI GGYRCC 1 cut(s) 707
BbsI GAAGAC 4 cut(s) 569, 762, 854, 1850
Bbv12I GWGCWC 1 cut(s) 1644
BbvCI CCTCAGC 1 cut(s) 696
BbvI GCAGC 7 cut(s) 25, 469, 491, 698, 920, 1303, 1423
BccI CCATC 3 cut(s) 107, 449, 1289
BcgI CGANNNNNNTGC 8 cut(s) 46, 80, 98, 132, 947, 981, 1343, 1377
BciT130I CCWGG 3 cut(s) 547, 1415, 2021
BciVI GTATCC 1 cut(s) 2017
BclI TGATCA 1 cut(s) 295
BcnI CCSGG 1 cut(s) 1674
BcoDI GTCTC 4 cut(s) 545, 1444, 1883, 1900
BfaI CTAG 1 cut(s) 1619
BfmI CTRYAG 1 cut(s) 1390
BfuAI ACCTGC 4 cut(s) 157, 1471, 1576, 2192
BfuI GTATCC 1 cut(s) 2017
BglI GCCNNNNNGGC 2 cut(s) 35, 389
BglII AGATCT 1 cut(s) 1086
BisI GCNGC 7 cut(s) 39, 480, 483, 687, 909, 1317, 1437
BlpI GCTNAGC 1 cut(s) 1581
BlsI GCNGC 7 cut(s) 40, 481, 484, 688, 910, 1318, 1438
Bme1390I CCNGG 4 cut(s) 547, 1415, 1674, 2021
Bme18I GGWCC 1 cut(s) 625
BmeT110I CYCGRG 2 cut(s) 393, 924
BmgT120I GGNCC 1 cut(s) 625
BmiI GGNNCC 6 cut(s) 709, 1183, 1191, 1461, 1485, 2188
BmrFI CCNGG 4 cut(s) 547, 1415, 1674, 2021
BmrI ACTGGG 1 cut(s) 195
BmsI GCATC 5 cut(s) 127, 725, 1508, 2119, 2255
BmuI ACTGGG 1 cut(s) 195
BpiI GAAGAC 4 cut(s) 569, 762, 854, 1850
BpmI CTGGAG 2 cut(s) 212, 1847
Bpu10I CCTNAGC 2 cut(s) 696, 2133
Bpu1102I GCTNAGC 1 cut(s) 1581
BpuEI CTTGAG 3 cut(s) 935, 1146, 1475
BpuMI CCSGG 1 cut(s) 1674
Bsa29I ATCGAT 1 cut(s) 2249
BsaBI GATNNNNATC 1 cut(s) 368
BsaI GGTCTC 1 cut(s) 1883
BsaJI CCNNGG 6 cut(s) 30, 546, 711, 1185, 2120, 2241
BsaXI ACNNNNNCTCC 4 cut(s) 185, 215, 1335, 1365
Bsc4I CCNNNNNNNGG 1 cut(s) 1899
Bse1I ACTGG 3 cut(s) 190, 1105, 1914
Bse21I CCTNAGG 1 cut(s) 2079
Bse3DI GCAATG 4 cut(s) 114, 322, 1503, 1539
Bse8I GATNNNNATC 1 cut(s) 368
BseBI CCWGG 3 cut(s) 547, 1415, 2021
BseCI ATCGAT 1 cut(s) 2249
BseDI CCNNGG 6 cut(s) 30, 546, 711, 1185, 2120, 2241
BseGI GGATG 4 cut(s) 355, 1908, 1918, 2134
BseJI GATNNNNATC 1 cut(s) 368
BseLI CCNNNNNNNGG 1 cut(s) 1899
BseMI GCAATG 4 cut(s) 114, 322, 1503, 1539
BseMII CTCAG 8 cut(s) 325, 378, 687, 1066, 1164, 1572, 1976, 2070
BseNI ACTGG 3 cut(s) 190, 1105, 1914
BseRI GAGGAG 1 cut(s) 478
BseSI GKGCMC 1 cut(s) 1644
BseXI GCAGC 7 cut(s) 25, 469, 491, 698, 920, 1303, 1423
BsgI GTGCAG 1 cut(s) 1700
Bsh1236I CGCG 4 cut(s) 48, 630, 1365, 2122
BshFI GGCC 1 cut(s) 107
BshNI GGYRCC 1 cut(s) 707
BshVI ATCGAT 1 cut(s) 2249
BsiHKAI GWGCWC 1 cut(s) 1644
BsiHKCI CYCGRG 2 cut(s) 393, 924
BsiSI CCGG 1 cut(s) 1674
BslFI GGGAC 2 cut(s) 181, 1737
BslI CCNNNNNNNGG 1 cut(s) 1899
BsmAI GTCTC 4 cut(s) 545, 1444, 1883, 1900
BsmFI GGGAC 2 cut(s) 181, 1737
BsmI GAATGC 2 cut(s) 275, 1224
BsnI GGCC 1 cut(s) 107
Bso31I GGTCTC 1 cut(s) 1883
BsoBI CYCGRG 2 cut(s) 393, 924
Bsp1286I GDGCHC 1 cut(s) 1644
Bsp1407I TGTACA 1 cut(s) 2143
Bsp1720I GCTNAGC 1 cut(s) 1581
Bsp19I CCATGG 2 cut(s) 711, 1185
Bsp68I TCGCGA 1 cut(s) 1365
BspACI CCGC 7 cut(s) 41, 614, 628, 705, 2075, 2120, 2122
BspANI GGCC 1 cut(s) 107
BspCNI CTCAG 8 cut(s) 324, 379, 688, 1065, 1165, 1573, 1977, 2071
BspDI ATCGAT 1 cut(s) 2249
BspFNI CGCG 4 cut(s) 48, 630, 1365, 2122
BspLI GGNNCC 6 cut(s) 709, 1183, 1191, 1461, 1485, 2188
BspMI ACCTGC 4 cut(s) 157, 1471, 1576, 2192
BspPI GGATC 7 cut(s) 21, 496, 906, 1184, 1197, 1386, 1664
BspQI GCTCTTC 2 cut(s) 933, 1569
BspT107I GGYRCC 1 cut(s) 707
BspTNI GGTCTC 1 cut(s) 1883
BsrDI GCAATG 4 cut(s) 114, 322, 1503, 1539
BsrGI TGTACA 1 cut(s) 2143
BsrI ACTGG 3 cut(s) 190, 1105, 1914
BssECI CCNNGG 6 cut(s) 30, 546, 711, 1185, 2120, 2241
BssNAI GTATAC 1 cut(s) 1020
BssT1I CCWWGG 4 cut(s) 30, 711, 1185, 2241
Bst1107I GTATAC 1 cut(s) 1020
Bst2UI CCWGG 3 cut(s) 547, 1415, 2021
Bst4CI ACNGT 4 cut(s) 853, 1651, 1837, 1856
Bst6I CTCTTC 5 cut(s) 933, 1442, 1569, 1881, 1911
BstAPI GCANNNNNTGC 2 cut(s) 137, 722
BstAUI TGTACA 1 cut(s) 2143
BstC8I GCNNGC 5 cut(s) 121, 512, 614, 1224, 1314
BstDSI CCRYGG 3 cut(s) 711, 1185, 2120
BstEII GGTNACC 1 cut(s) 1729
BstF5I GGATG 4 cut(s) 355, 1908, 1918, 2134
BstFNI CGCG 4 cut(s) 48, 630, 1365, 2122
BstHHI GCGC 2 cut(s) 48, 632
BstMAI GTCTC 4 cut(s) 545, 1444, 1883, 1900
BstNI CCWGG 3 cut(s) 547, 1415, 2021
BstNSI RCATGY 1 cut(s) 1608
BstPI GGTNACC 1 cut(s) 1729
BstSCI CCNGG 4 cut(s) 545, 1413, 1672, 2019
BstSFI CTRYAG 1 cut(s) 1390
BstSLI GKGCMC 1 cut(s) 1644
BstUI CGCG 4 cut(s) 48, 630, 1365, 2122
BstV1I GCAGC 7 cut(s) 25, 469, 491, 698, 920, 1303, 1423
BstV2I GAAGAC 4 cut(s) 569, 762, 854, 1850
BstX2I RGATCY 7 cut(s) 13, 488, 898, 1086, 1189, 1378, 1669
BstYI RGATCY 7 cut(s) 13, 488, 898, 1086, 1189, 1378, 1669
BstZ17I GTATAC 1 cut(s) 1020
Bsu15I ATCGAT 1 cut(s) 2249
Bsu36I CCTNAGG 1 cut(s) 2079
BsuI GTATCC 1 cut(s) 2017
BsuRI GGCC 1 cut(s) 107
BsuTUI ATCGAT 1 cut(s) 2249
BtgI CCRYGG 3 cut(s) 711, 1185, 2120
BtgZI GCGATG 1 cut(s) 1531
BtsCI GGATG 4 cut(s) 355, 1908, 1918, 2134
BtsIMutI CAGTG 3 cut(s) 1060, 1660, 2033
BtuMI TCGCGA 1 cut(s) 1365
BveI ACCTGC 4 cut(s) 157, 1471, 1576, 2192
Cac8I GCNNGC 5 cut(s) 121, 512, 614, 1224, 1314
CaiI CAGNNNCTG 3 cut(s) 485, 695, 1319
CfoI GCGC 2 cut(s) 48, 632
Cfr13I GGNCC 1 cut(s) 625
Cfr42I CCGCGG 1 cut(s) 2123
ClaI ATCGAT 1 cut(s) 2249
CseI GACGC 1 cut(s) 756
Csp6I GTAC 4 cut(s) 150, 1243, 1271, 2144
CviAII CATG 9 cut(s) 293, 578, 712, 962, 1006, 1186, 1384, 1605, 1927
CviQI GTAC 4 cut(s) 150, 1243, 1271, 2144
Eam1104I CTCTTC 5 cut(s) 933, 1442, 1569, 1881, 1911
EarI CTCTTC 5 cut(s) 933, 1442, 1569, 1881, 1911
EciI GGCGGA 1 cut(s) 2064
Eco130I CCWWGG 4 cut(s) 30, 711, 1185, 2241
Eco31I GGTCTC 1 cut(s) 1883
Eco47I GGWCC 1 cut(s) 625
Eco57I CTGAAG 4 cut(s) 68, 699, 1452, 1992
Eco81I CCTNAGG 1 cut(s) 2079
Eco88I CYCGRG 2 cut(s) 393, 924
Eco91I GGTNACC 1 cut(s) 1729
EcoO65I GGTNACC 1 cut(s) 1729
EcoRI GAATTC 2 cut(s) 1201, 2170
EcoRII CCWGG 3 cut(s) 545, 1413, 2019
EcoT14I CCWWGG 4 cut(s) 30, 711, 1185, 2241
ErhI CCWWGG 4 cut(s) 30, 711, 1185, 2241
FaeI CATG 9 cut(s) 296, 581, 715, 965, 1009, 1189, 1387, 1608, 1930
FalI AAGNNNNNCTT 4 cut(s) 645, 677, 897, 929
FaqI GGGAC 2 cut(s) 181, 1737
FatI CATG 9 cut(s) 292, 577, 711, 961, 1005, 1185, 1383, 1604, 1926
FauI CCCGC 1 cut(s) 621
FbaI TGATCA 1 cut(s) 295
FblI GTMKAC 1 cut(s) 1019
Fnu4HI GCNGC 7 cut(s) 39, 480, 483, 687, 909, 1317, 1437
FokI GGATG 4 cut(s) 362, 1915, 1925, 2141
Fsp4HI GCNGC 7 cut(s) 39, 480, 483, 687, 909, 1317, 1437
FspBI CTAG 1 cut(s) 1619
GlaI GCGC 2 cut(s) 47, 631
GluI GCNGC 7 cut(s) 39, 480, 483, 687, 909, 1317, 1437
GsuI CTGGAG 2 cut(s) 212, 1847
HaeIII GGCC 1 cut(s) 107
HapII CCGG 1 cut(s) 1674
HgaI GACGC 1 cut(s) 756
HhaI GCGC 2 cut(s) 48, 632
Hin1II CATG 9 cut(s) 296, 581, 715, 965, 1009, 1189, 1387, 1608, 1930
Hin6I GCGC 2 cut(s) 46, 630
HinP1I GCGC 2 cut(s) 46, 630
HincII GTYRAC 4 cut(s) 444, 1324, 1591, 1852
HindII GTYRAC 4 cut(s) 444, 1324, 1591, 1852
HindIII AAGCTT 3 cut(s) 305, 1697, 2093
HinfI GANTC 5 cut(s) 194, 864, 1151, 1336, 1974
HpaI GTTAAC 2 cut(s) 444, 1591
HpaII CCGG 1 cut(s) 1674
HphI GGTGA 1 cut(s) 1769
Hpy166II GTNNAC 6 cut(s) 444, 1020, 1324, 1591, 1642, 1852
Hpy188I TCNGA 7 cut(s) 300, 388, 783, 1174, 1471, 1707, 1979
Hpy188III TCNNGA 8 cut(s) 266, 452, 774, 1333, 1364, 1556, 1826, 2054
Hpy8I GTNNAC 6 cut(s) 444, 1020, 1324, 1591, 1642, 1852
HpyAV CCTTC 5 cut(s) 851, 1624, 1702, 2105, 2119
HpyCH4III ACNGT 4 cut(s) 853, 1651, 1837, 1856
HpyCH4IV ACGT 1 cut(s) 566
HpySE526I ACGT 1 cut(s) 566
Hsp92II CATG 9 cut(s) 296, 581, 715, 965, 1009, 1189, 1387, 1608, 1930
HspAI GCGC 2 cut(s) 46, 630
Ksp22I TGATCA 1 cut(s) 295
KspAI GTTAAC 2 cut(s) 444, 1591
KspI CCGCGG 1 cut(s) 2123
LguI GCTCTTC 2 cut(s) 933, 1569
LmnI GCTCC 1 cut(s) 1537
Lsp1109I GCAGC 7 cut(s) 25, 469, 491, 698, 920, 1303, 1423
LweI GCATC 5 cut(s) 127, 725, 1508, 2119, 2255
MaeI CTAG 1 cut(s) 1619
MaeII ACGT 1 cut(s) 566
MaeIII GTNAC 3 cut(s) 1055, 1096, 1729
MfeI CAATTG 1 cut(s) 720
MflI RGATCY 7 cut(s) 13, 488, 898, 1086, 1189, 1378, 1669
MhlI GDGCHC 1 cut(s) 1644
MluCI AATT 7 cut(s) 720, 840, 1126, 1201, 1395, 1407, 2170
MlyI GAGTC 2 cut(s) 203, 1983
MroXI GAANNNNTTC 3 cut(s) 996, 1563, 1920
MslI CAYNNNNRTG 1 cut(s) 2251
MspA1I CMGCKG 3 cut(s) 482, 1316, 2122
MspI CCGG 1 cut(s) 1674
MspR9I CCNGG 4 cut(s) 547, 1415, 1674, 2021
MunI CAATTG 1 cut(s) 720
Mva1269I GAATGC 2 cut(s) 275, 1224
MvaI CCWGG 3 cut(s) 547, 1415, 2021
MvnI CGCG 4 cut(s) 48, 630, 1365, 2122
NciI CCSGG 1 cut(s) 1674
NcoI CCATGG 2 cut(s) 711, 1185
NlaIII CATG 9 cut(s) 296, 581, 715, 965, 1009, 1189, 1387, 1608, 1930
NlaIV GGNNCC 6 cut(s) 709, 1183, 1191, 1461, 1485, 2188
NmeAIII GCCGAG 1 cut(s) 187
NmuCI GTSAC 1 cut(s) 1055
NruI TCGCGA 1 cut(s) 1365
NspI RCATGY 1 cut(s) 1608
PaeR7I CTCGAG 1 cut(s) 924
PciSI GCTCTTC 2 cut(s) 933, 1569
PctI GAATGC 2 cut(s) 275, 1224
PdmI GAANNNNTTC 3 cut(s) 996, 1563, 1920
PfeI GAWTC 3 cut(s) 864, 1151, 1336
PfoI TCCNGGA 1 cut(s) 1672
PkrI GCNGC 7 cut(s) 40, 481, 484, 688, 910, 1318, 1438
PleI GAGTC 2 cut(s) 202, 1982
PpsI GAGTC 2 cut(s) 202, 1982
PshBI ATTAAT 1 cut(s) 426
Psp6I CCWGG 3 cut(s) 545, 1413, 2019
PspEI GGTNACC 1 cut(s) 1729
PspGI CCWGG 3 cut(s) 545, 1413, 2019
PspN4I GGNNCC 6 cut(s) 709, 1183, 1191, 1461, 1485, 2188
PspPI GGNCC 1 cut(s) 625
PspXI VCTCGAGB 1 cut(s) 924
PstNI CAGNNNCTG 3 cut(s) 485, 695, 1319
PsuI RGATCY 7 cut(s) 13, 488, 898, 1086, 1189, 1378, 1669
PvuII CAGCTG 2 cut(s) 482, 1316
RruI TCGCGA 1 cut(s) 1365
RsaI GTAC 4 cut(s) 151, 1244, 1272, 2145
RsaNI GTAC 4 cut(s) 150, 1243, 1271, 2144
RseI CAYNNNNRTG 1 cut(s) 2251
SacII CCGCGG 1 cut(s) 2123
SapI GCTCTTC 2 cut(s) 933, 1569
SatI GCNGC 7 cut(s) 39, 480, 483, 687, 909, 1317, 1437
Sau96I GGNCC 1 cut(s) 625
SchI GAGTC 2 cut(s) 203, 1983
ScrFI CCNGG 4 cut(s) 547, 1415, 1674, 2021
SduI GDGCHC 1 cut(s) 1644
SfaNI GCATC 5 cut(s) 127, 725, 1508, 2119, 2255
SfcI CTRYAG 1 cut(s) 1390
Sfr274I CTCGAG 1 cut(s) 924
Sfr303I CCGCGG 1 cut(s) 2123
SgrBI CCGCGG 1 cut(s) 2123
SinI GGWCC 1 cut(s) 625
SlaI CTCGAG 1 cut(s) 924
SmiMI CAYNNNNRTG 1 cut(s) 2251
SmlI CTYRAG 4 cut(s) 914, 924, 1161, 1454
SmoI CTYRAG 4 cut(s) 914, 924, 1161, 1454
Sse9I AATT 7 cut(s) 720, 840, 1126, 1201, 1395, 1407, 2170
SsiI CCGC 7 cut(s) 41, 614, 628, 705, 2075, 2120, 2122
SspI AATATT 3 cut(s) 524, 996, 2050
SspMI CTAG 1 cut(s) 1619
StyD4I CCNGG 4 cut(s) 545, 1413, 1672, 2019
StyI CCWWGG 4 cut(s) 30, 711, 1185, 2241
TaaI ACNGT 4 cut(s) 853, 1651, 1837, 1856
TaiI ACGT 1 cut(s) 569
TaqI TCGA 5 cut(s) 354, 368, 773, 925, 2249
TasI AATT 7 cut(s) 720, 840, 1126, 1201, 1395, 1407, 2170
TatI WGTACW 2 cut(s) 149, 2143
TfiI GAWTC 3 cut(s) 864, 1151, 1336
TscAI CASTG 3 cut(s) 1060, 1660, 2040
TseFI GTSAC 1 cut(s) 1055
TseI GCWGC 7 cut(s) 38, 479, 482, 686, 908, 1316, 1436
Tsp45I GTSAC 1 cut(s) 1055
TspDTI ATGAA 6 cut(s) 812, 1005, 1083, 1164, 1214, 1929
TspGWI ACGGA 2 cut(s) 221, 1391
TspRI CASTG 3 cut(s) 1060, 1660, 2040
VneI GTGCAC 1 cut(s) 1640
VpaK11BI GGWCC 1 cut(s) 625
VspI ATTAAT 1 cut(s) 426
XapI RAATTY 3 cut(s) 1126, 1201, 2170
XceI RCATGY 1 cut(s) 1608
XhoI CTCGAG 1 cut(s) 924
XmiI GTMKAC 1 cut(s) 1019
XmnI GAANNNNTTC 3 cut(s) 996, 1563, 1920
XspI CTAG 1 cut(s) 1619
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.