Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0002387

Physical Location & Seq

Genomic Coordinates Reverse (-)

20758663 .. 20772751

Gene Structure 14089 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00398880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGATGGTTGAGGATCTAGGTGTGGAAGCGAAGGAAGCGGCGGTGCGGGAGGTTGCGAAGCTGTTACCTCTGCCGGAGCTGCTTCAGTCTATTTCTTCCATCAAGGCCGATTACATTGCTCGCCAACAGGTAGAACAAGCACAAGCTGGGCTGGAATCACTGTCCTTATCTCAGAAATCAATAAACCAACTCCGGGAAAACTTTGTTTCTATTGAAAAGCTGTGTCAAGAATGCCAAACTTTGATTGAAAACCATGATCAGATAAAGCTTCTCAGCAATGCAAGAAATAACTTGAATACAACCTTAAAGGATGTTGAGGGTATGATGTCAATCTCTGTTGAGGCCTCTGAGGCTCGGGCATCTTTAAGTGATGATAAAGAACTCATTAATACATATGAGAGGTTAACTGCTCTTGATGGAAAGCGGAGGTTTGCATTAGCAGCTGCAGGATCTCACAAGGAAGAGGTTGGCAGGCTAAGAGAATATTTTGAAGATGTTGATAAGACCTGGGAGACATTTGAGAAGACATTATGGAGCCACATTTCCAACTTCTATAAACTTTCCAAAGAAAGGGTTGTTGAAATGCAAGAAATCCTTGACTATCAACTTGCTGAAGAAGCAGCTGAGGCTGAGGGAGGCGGTGCCATGGCATCAATTGCCAATCCTCGTAGAACTTCCAAAAAAACTACCACAGCAATAGCTTCTTCGAGAAATCTGACGCAGCAGAAACTGAATGTACAAGGCAAAGGCTACAAGGACAAATGCTATGAGCAAATTAGGAAGACTGTTGAAGGACGATTCAACAAGCTACTGACAGAGCTTTGTTATGAGGATCTTAAAGCAGCACTAGAGGAAGCTCGAGCGCTTGATTACGCTATAAGCTTGGAATCAAGGATGAAATATACCTTTTTTGATATATCAGATTGGAGAAGAGCTTGGAGATATATACGACCATGTAGCCCCTTGTTTTCCCCCAGATATGAAATATTCCAACTCATGGTCAATCTGTATACCGAGAGATTCGTTCAAATGCTTAGATTACTCAGTGACAGGGCAAATGAAATGACGAACATAGAGATCTTAAAGGTAACTGGTTGGGTAGTTGAATACCAAGAAAATCTGATTGGGCTTGGTGTTGATGAATCTCTTGCTCAAGTATGTTCTGAGAGTGGTTCCATGGATCCCCTTATGAATTCTTATGTGGAGAGAATGCAAGCTACGACAAGGAAATGGTACTTGAATATCTTGGAGGCTGATAAGGTACAGCCACCGAAGAAAACAGAAGATGGGAAGCTATATACGCCAGCTGCTGTTGATTTATTCAGGATCCTTGGAGAGCAAGTGCAAATTGTTCGCGATAATAGTACAGAGCTCATGCTTTACAGAATTGCTTTAGCAATTATCCAGGTAATGATTGATTTTCAAGCTGCTGAAAGGAAGAGACTTGAGGAACCTGCTTCAGAAGTTGGTTTGGAACCCTTATGTGCGATGATTAACAACAATCTACGCTGCTATGATCTCGCAATGGAGCTAAGTAATAGCACTTTGGAAGCTCTTCCCCAAAACTATGCTGAGCAGGAAGCTGTGCATCAAACTGTCAGTGTTATTTTTGAAGATCCCGGAGTGCAGGATTTACTTGTGAAGCTCTATCAGAAGGAGTGGTGCGAGGGACAGGTTACTGAGTATCTTGTTGCAACGTTTGGTGATTATTTTACAGATAAAAACTACATAAAGGAAGAGACCATTGAAAGGATGAGACTAGATGAAGAGGTTCTCATGGACTTTTTTAGGGAGTATTTAAGTGTTTCTAAAGTAGAAAACAGAGTCAGCATACTGAGTGATTTGAGAGAACTTGCTTCAGCAGAGAGCCTGGATACATTCACACTGATTTACACAAATATTCTCGAACATCAACCTGATTGTCCGCCTGAGGTAGTGGAGAAGCTTGTTGCACTGCGAGAAGGCATACCGCGAAAGGATGCCAAGGAGGTTGTACAAGAGTGCAAAGAGATATATGAGAATTCTCTCGTCAATGGAACCCCTGCCAAAGCAGGGTTTGTATTTCCAAGGGTTAAGTGCTTATCATCTGCCAAGGCATCAATATGGCGAAAGCTAACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Sec6

Protein Analysis

706

Amino Acids

80.82

Weight (kDa)

4.98

Isoelectric Point (pI)

37.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec6	PF06046	163 - 575	3.5e-61	Exocyst complex component Sec6
Sec6	PF06046	578 - 658	3.4e-12	Exocyst complex component Sec6

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002387)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71820 AT1G71820
fragaria_vesca	FvH4_6g24280 FvH4_6g24280 FvH4_6g24280 FvH4_6g24280 FvH4_6g24280
malus_domestica	MD14G1071700.v1.1
prunus_persica	Prupe.4G277400_v2.0.a1 Prupe.4G277400_v2.0.a1
pyrus_communis	pycom12g06340 pycom14g06140
rosa_chinensis	RchiOBHm_Chr1g0335041 RchiOBHm_Chr1g0335051 RchiOBHm_Chr1g0335061 RchiOBHm_Chr3g0482841
rosa_laevigata	RLG00000023322 RLG00000029399
rosa_multiflora	Rmu_co8266849.1_g000001 Rmu_sc0006746.1_g000005 Rmu_ssc0000175.1_g000029
rosa_roxburghii	Rroxscaffold_4G00316140 Rroxscaffold_4G00316250 Rroxscaffold_6G00398880 Rroxscaffold_7G00196430 Rroxscaffold_7G00196440
rosa_rugosa	Rorug01G0118700 Rorug01G0118900 Rorug03G0201400.1 Rorug03G0201500.1
rosa_samantha	Rh1AG141600 Rh1BG110100 Rh1BG110200 Rh1CG133600 Rh1DG146400 Rh3AG250300 Rh3BG286700 Rh3CG284200 Rh3DG279800
rosa_wichuraiana	Rw0G013950 Rw1G011760 Rw3G022680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1462
AccB1I	GGYRCC	1 cut(s)	641
AccB7I	CCANNNNNTGG	1 cut(s)	997
AccI	GTMKAC	1 cut(s)	1010
AccII	CGCG	2 cut(s)	1356, 1972
AciI	CCGC	7 cut(s)	38, 41, 46, 424, 639, 1925, 1970
AclI	AACGTT	1 cut(s)	1697
AclWI	GGATC	8 cut(s)	21, 457, 840, 1175, 1188, 1321, 1334, 1610
AcsI	RAATTY	2 cut(s)	1192, 2020
AcuI	CTGAAG	4 cut(s)	68, 633, 1443, 1842
AfaI	GTAC	5 cut(s)	738, 1235, 1263, 1366, 1995
AfeI	AGCGCT	1 cut(s)	864
AfiI	CCNNNNNNNGG	5 cut(s)	193, 570, 997, 1749, 2052
AjnI	CCWGG	3 cut(s)	506, 1404, 1869
AjuI	GAANNNNNNNTTGG	2 cut(s)	1107, 1139
Alw21I	GWGCWC	1 cut(s)	1374
Alw26I	GTCTC	4 cut(s)	506, 1435, 1733, 1750
AlwI	GGATC	8 cut(s)	21, 457, 840, 1175, 1188, 1321, 1334, 1610
AlwNI	CAGNNNCTG	2 cut(s)	730, 1310
Ama87I	CYCGRG	2 cut(s)	354, 858
Aor51HI	AGCGCT	1 cut(s)	864
AoxI	GGCC	2 cut(s)	105, 342
ApeKI	GCWGC	9 cut(s)	79, 440, 443, 620, 721, 842, 1307, 1427, 1509
ApoI	RAATTY	2 cut(s)	1192, 2020
AseI	ATTAAT	1 cut(s)	387
Asp700I	GAANNNNTTC	2 cut(s)	1554, 1770
AspLEI	GCGC	1 cut(s)	865
AsuC2I	CCSGG	2 cut(s)	194, 1620
AsuHPI	GGTGA	1 cut(s)	1715
AvaI	CYCGRG	2 cut(s)	354, 858
AxyI	CCTNAGG	1 cut(s)	1929
BamHI	GGATCC	2 cut(s)	1180, 1326
BanI	GGYRCC	1 cut(s)	641
BanII	GRGCYC	1 cut(s)	1374
BbsI	GAAGAC	2 cut(s)	530, 788
Bbv12I	GWGCWC	1 cut(s)	1374
BbvCI	CCTCAGC	2 cut(s)	624, 630
BbvI	GCAGC	9 cut(s)	66, 430, 452, 632, 733, 854, 1294, 1414, 1496
BccI	CCATC	3 cut(s)	107, 410, 1280
BcgI	CGANNNNNNTGC	4 cut(s)	98, 132, 1334, 1368
BciT130I	CCWGG	3 cut(s)	508, 1406, 1871
BciVI	GTATCC	1 cut(s)	1867
BclI	TGATCA	1 cut(s)	256
BcnI	CCSGG	2 cut(s)	194, 1620
BcoDI	GTCTC	4 cut(s)	506, 1435, 1733, 1750
BfaI	CTAG	3 cut(s)	17, 848, 1760
BfmI	CTRYAG	1 cut(s)	444
BfoI	RGCGCY	1 cut(s)	866
BfuAI	ACCTGC	1 cut(s)	1462
BfuI	GTATCC	1 cut(s)	1867
BglI	GCCNNNNNGGC	1 cut(s)	350
BglII	AGATCT	1 cut(s)	1077
BlpI	GCTNAGC	1 cut(s)	1572
Bme1390I	CCNGG	5 cut(s)	194, 508, 1406, 1620, 1871
BmeT110I	CYCGRG	2 cut(s)	354, 858
BmiI	GGNNCC	8 cut(s)	536, 643, 1174, 1182, 1328, 1452, 1476, 2038
BmrFI	CCNGG	5 cut(s)	194, 508, 1406, 1620, 1871
BmsI	GCATC	5 cut(s)	368, 659, 1597, 1969, 2105
BpiI	GAAGAC	2 cut(s)	530, 788
Bpu10I	CCTNAGC	2 cut(s)	624, 630
Bpu1102I	GCTNAGC	1 cut(s)	1572
BpuEI	CTTGAG	2 cut(s)	1137, 1466
BpuMI	CCSGG	2 cut(s)	194, 1620
BsaBI	GATNNNNATC	1 cut(s)	329
BsaI	GGTCTC	1 cut(s)	1733
BsaJI	CCNNGG	7 cut(s)	507, 645, 1176, 1330, 1983, 2066, 2091
BsaXI	ACNNNNNCTCC	2 cut(s)	1326, 1356
Bsc4I	CCNNNNNNNGG	5 cut(s)	193, 570, 997, 1749, 2052
Bse1I	ACTGG	1 cut(s)	1096
Bse21I	CCTNAGG	1 cut(s)	1929
Bse3DI	GCAATG	3 cut(s)	114, 283, 1530
Bse8I	GATNNNNATC	1 cut(s)	329
BseBI	CCWGG	3 cut(s)	508, 1406, 1871
BseDI	CCNNGG	7 cut(s)	507, 645, 1176, 1330, 1983, 2066, 2091
BseGI	GGATG	4 cut(s)	316, 900, 1758, 1984
BseJI	GATNNNNATC	1 cut(s)	329
BseLI	CCNNNNNNNGG	5 cut(s)	193, 570, 997, 1749, 2052
BseMI	GCAATG	3 cut(s)	114, 283, 1530
BseNI	ACTGG	1 cut(s)	1096
BseXI	GCAGC	9 cut(s)	66, 430, 452, 632, 733, 854, 1294, 1414, 1496
BseYI	CCCAGC	1 cut(s)	146
BsgI	GTGCAG	1 cut(s)	1646
Bsh1236I	CGCG	2 cut(s)	1356, 1972
BshFI	GGCC	2 cut(s)	107, 344
BshNI	GGYRCC	1 cut(s)	641
BsiHKAI	GWGCWC	1 cut(s)	1374
BsiHKCI	CYCGRG	2 cut(s)	354, 858
BsiSI	CCGG	3 cut(s)	74, 193, 1620
BslFI	GGGAC	1 cut(s)	1683
BslI	CCNNNNNNNGG	5 cut(s)	193, 570, 997, 1749, 2052
BsmAI	GTCTC	4 cut(s)	506, 1435, 1733, 1750
BsmFI	GGGAC	1 cut(s)	1683
BsmI	GAATGC	2 cut(s)	236, 1215
BsnI	GGCC	2 cut(s)	107, 344
Bso31I	GGTCTC	1 cut(s)	1733
BsoBI	CYCGRG	2 cut(s)	354, 858
Bsp1286I	GDGCHC	1 cut(s)	1374
Bsp1407I	TGTACA	2 cut(s)	736, 1993
Bsp143I	GATC	9 cut(s)	13, 256, 449, 832, 1077, 1180, 1326, 1516, 1615
Bsp1720I	GCTNAGC	1 cut(s)	1572
Bsp19I	CCATGG	2 cut(s)	645, 1176
Bsp68I	TCGCGA	1 cut(s)	1356
BspACI	CCGC	7 cut(s)	38, 41, 46, 424, 639, 1925, 1970
BspANI	GGCC	2 cut(s)	107, 344
BspFNI	CGCG	2 cut(s)	1356, 1972
BspLI	GGNNCC	8 cut(s)	536, 643, 1174, 1182, 1328, 1452, 1476, 2038
BspMAI	CTGCAG	1 cut(s)	448
BspMI	ACCTGC	1 cut(s)	1462
BspPI	GGATC	8 cut(s)	21, 457, 840, 1175, 1188, 1321, 1334, 1610
BspQI	GCTCTTC	2 cut(s)	925, 1560
BspT107I	GGYRCC	1 cut(s)	641
BspTNI	GGTCTC	1 cut(s)	1733
BsrDI	GCAATG	3 cut(s)	114, 283, 1530
BsrGI	TGTACA	2 cut(s)	736, 1993
BsrI	ACTGG	1 cut(s)	1096
BssECI	CCNNGG	7 cut(s)	507, 645, 1176, 1330, 1983, 2066, 2091
BssMI	GATC	9 cut(s)	13, 256, 449, 832, 1077, 1180, 1326, 1516, 1615
BssNAI	GTATAC	1 cut(s)	1011
BssT1I	CCWWGG	6 cut(s)	645, 1176, 1330, 1983, 2066, 2091
Bst1107I	GTATAC	1 cut(s)	1011
Bst2UI	CCWGG	3 cut(s)	508, 1406, 1871
Bst4CI	ACNGT	3 cut(s)	162, 787, 1597
Bst6I	CTCTTC	6 cut(s)	456, 925, 1433, 1560, 1731, 1761
BstAPI	GCANNNNNTGC	1 cut(s)	656
BstAUI	TGTACA	2 cut(s)	736, 1993
BstC8I	GCNNGC	4 cut(s)	121, 473, 1215, 1305
BstDSI	CCRYGG	2 cut(s)	645, 1176
BstF5I	GGATG	4 cut(s)	316, 900, 1758, 1984
BstFNI	CGCG	2 cut(s)	1356, 1972
BstH2I	RGCGCY	1 cut(s)	866
BstHHI	GCGC	1 cut(s)	865
BstKTI	GATC	9 cut(s)	16, 259, 452, 835, 1080, 1183, 1329, 1519, 1618
BstMAI	GTCTC	4 cut(s)	506, 1435, 1733, 1750
BstMBI	GATC	9 cut(s)	13, 256, 449, 832, 1077, 1180, 1326, 1516, 1615
BstMWI	GCNNNNNNNGC	8 cut(s)	35, 79, 350, 440, 617, 626, 656, 1300
BstNI	CCWGG	3 cut(s)	508, 1406, 1871
BstSCI	CCNGG	5 cut(s)	192, 506, 1404, 1618, 1869
BstSFI	CTRYAG	1 cut(s)	444
BstUI	CGCG	2 cut(s)	1356, 1972
BstV1I	GCAGC	9 cut(s)	66, 430, 452, 632, 733, 854, 1294, 1414, 1496
BstV2I	GAAGAC	2 cut(s)	530, 788
BstX2I	RGATCY	7 cut(s)	13, 449, 832, 1077, 1180, 1326, 1615
BstYI	RGATCY	7 cut(s)	13, 449, 832, 1077, 1180, 1326, 1615
BstZ17I	GTATAC	1 cut(s)	1011
Bsu36I	CCTNAGG	1 cut(s)	1929
BsuI	GTATCC	1 cut(s)	1867
BsuRI	GGCC	2 cut(s)	107, 344
BtgI	CCRYGG	2 cut(s)	645, 1176
BtgZI	GCGATG	1 cut(s)	1502
BtsCI	GGATG	4 cut(s)	316, 900, 1758, 1984
BtsI	GCAGTG	1 cut(s)	1952
BtsIMutI	CAGTG	5 cut(s)	158, 1051, 1606, 1883, 1952
BtuMI	TCGCGA	1 cut(s)	1356
BveI	ACCTGC	1 cut(s)	1462
Cac8I	GCNNGC	4 cut(s)	121, 473, 1215, 1305
CaiI	CAGNNNCTG	2 cut(s)	730, 1310
CfoI	GCGC	1 cut(s)	865
CseI	GACGC	1 cut(s)	727
Csp6I	GTAC	5 cut(s)	737, 1234, 1262, 1365, 1994
CviAII	CATG	7 cut(s)	254, 646, 954, 997, 1177, 1375, 1777
CviQI	GTAC	5 cut(s)	737, 1234, 1262, 1365, 1994
DpnI	GATC	9 cut(s)	15, 258, 451, 834, 1079, 1182, 1328, 1518, 1617
DpnII	GATC	9 cut(s)	13, 256, 449, 832, 1077, 1180, 1326, 1516, 1615
Eam1104I	CTCTTC	6 cut(s)	456, 925, 1433, 1560, 1731, 1761
EarI	CTCTTC	6 cut(s)	456, 925, 1433, 1560, 1731, 1761
EciI	GGCGGA	1 cut(s)	1914
Ecl136II	GAGCTC	1 cut(s)	1372
Eco130I	CCWWGG	6 cut(s)	645, 1176, 1330, 1983, 2066, 2091
Eco147I	AGGCCT	1 cut(s)	344
Eco24I	GRGCYC	1 cut(s)	1374
Eco31I	GGTCTC	1 cut(s)	1733
Eco47III	AGCGCT	1 cut(s)	864
Eco53kI	GAGCTC	1 cut(s)	1372
Eco57I	CTGAAG	4 cut(s)	68, 633, 1443, 1842
Eco81I	CCTNAGG	1 cut(s)	1929
Eco88I	CYCGRG	2 cut(s)	354, 858
EcoICRI	GAGCTC	1 cut(s)	1372
EcoRI	GAATTC	2 cut(s)	1192, 2020
EcoRII	CCWGG	3 cut(s)	506, 1404, 1869
EcoT14I	CCWWGG	6 cut(s)	645, 1176, 1330, 1983, 2066, 2091
EcoT38I	GRGCYC	1 cut(s)	1374
ErhI	CCWWGG	6 cut(s)	645, 1176, 1330, 1983, 2066, 2091
FaeI	CATG	7 cut(s)	257, 649, 957, 1000, 1180, 1378, 1780
FalI	AAGNNNNNCTT	2 cut(s)	579, 611
FaqI	GGGAC	1 cut(s)	1683
FatI	CATG	7 cut(s)	253, 645, 953, 996, 1176, 1374, 1776
FauI	CCCGC	1 cut(s)	39
FauNDI	CATATG	1 cut(s)	394
FbaI	TGATCA	1 cut(s)	256
FblI	GTMKAC	1 cut(s)	1010
FokI	GGATG	4 cut(s)	323, 907, 1765, 1991
FriOI	GRGCYC	1 cut(s)	1374
FspBI	CTAG	3 cut(s)	17, 848, 1760
GlaI	GCGC	1 cut(s)	864
GsaI	CCCAGC	1 cut(s)	150
HaeII	RGCGCY	1 cut(s)	866
HaeIII	GGCC	2 cut(s)	107, 344
HapII	CCGG	3 cut(s)	74, 193, 1620
HgaI	GACGC	1 cut(s)	727
HhaI	GCGC	1 cut(s)	865
Hin1II	CATG	7 cut(s)	257, 649, 957, 1000, 1180, 1378, 1780
Hin6I	GCGC	1 cut(s)	863
HinP1I	GCGC	1 cut(s)	863
HincII	GTYRAC	1 cut(s)	405
HindII	GTYRAC	1 cut(s)	405
HindIII	AAGCTT	3 cut(s)	266, 880, 1943
HinfI	GANTC	6 cut(s)	155, 798, 887, 1020, 1142, 1824
HpaI	GTTAAC	1 cut(s)	405
HpaII	CCGG	3 cut(s)	74, 193, 1620
HphI	GGTGA	1 cut(s)	1715
Hpy166II	GTNNAC	2 cut(s)	405, 1011
Hpy188I	TCNGA	9 cut(s)	174, 261, 349, 717, 922, 1122, 1165, 1462, 1653
Hpy188III	TCNNGA	6 cut(s)	227, 413, 708, 1324, 1355, 1904
Hpy8I	GTNNAC	2 cut(s)	405, 1011
HpyAV	CCTTC	4 cut(s)	25, 785, 1648, 1955
HpyCH4III	ACNGT	3 cut(s)	162, 787, 1597
HpyCH4IV	ACGT	1 cut(s)	1697
HpyF10VI	GCNNNNNNNGC	8 cut(s)	35, 79, 350, 440, 617, 626, 656, 1300
HpySE526I	ACGT	1 cut(s)	1697
Hsp92II	CATG	7 cut(s)	257, 649, 957, 1000, 1180, 1378, 1780
HspAI	GCGC	1 cut(s)	863
Ksp22I	TGATCA	1 cut(s)	256
KspAI	GTTAAC	1 cut(s)	405
Kzo9I	GATC	9 cut(s)	13, 256, 449, 832, 1077, 1180, 1326, 1516, 1615
LguI	GCTCTTC	2 cut(s)	925, 1560
LmnI	GCTCC	3 cut(s)	76, 534, 1528
Lsp1109I	GCAGC	9 cut(s)	66, 430, 452, 632, 733, 854, 1294, 1414, 1496
LweI	GCATC	5 cut(s)	368, 659, 1597, 1969, 2105
MaeI	CTAG	3 cut(s)	17, 848, 1760
MaeII	ACGT	1 cut(s)	1697
MaeIII	GTNAC	4 cut(s)	63, 1046, 1087, 1675
MalI	GATC	9 cut(s)	15, 258, 451, 834, 1079, 1182, 1328, 1518, 1617
MboI	GATC	9 cut(s)	13, 256, 449, 832, 1077, 1180, 1326, 1516, 1615
MfeI	CAATTG	1 cut(s)	654
MflI	RGATCY	7 cut(s)	13, 449, 832, 1077, 1180, 1326, 1615
MhlI	GDGCHC	1 cut(s)	1374
MluCI	AATT	7 cut(s)	654, 774, 1192, 1347, 1386, 1398, 2020
MlyI	GAGTC	1 cut(s)	1833
MmeI	TCCRAC	2 cut(s)	570, 1015
MroXI	GAANNNNTTC	2 cut(s)	1554, 1770
MseI	TTAA	9 cut(s)	305, 365, 387, 404, 837, 1082, 1494, 1799, 2073
MslI	CAYNNNNRTG	1 cut(s)	2101
MspA1I	CMGCKG	3 cut(s)	443, 623, 1307
MspI	CCGG	3 cut(s)	74, 193, 1620
MspR9I	CCNGG	5 cut(s)	194, 508, 1406, 1620, 1871
MunI	CAATTG	1 cut(s)	654
Mva1269I	GAATGC	2 cut(s)	236, 1215
MvaI	CCWGG	3 cut(s)	508, 1406, 1871
MvnI	CGCG	2 cut(s)	1356, 1972
MwoI	GCNNNNNNNGC	8 cut(s)	35, 79, 350, 440, 617, 626, 656, 1300
NciI	CCSGG	2 cut(s)	194, 1620
NcoI	CCATGG	2 cut(s)	645, 1176
NdeI	CATATG	1 cut(s)	394
NdeII	GATC	9 cut(s)	13, 256, 449, 832, 1077, 1180, 1326, 1516, 1615
NlaIII	CATG	7 cut(s)	257, 649, 957, 1000, 1180, 1378, 1780
NlaIV	GGNNCC	8 cut(s)	536, 643, 1174, 1182, 1328, 1452, 1476, 2038
NmuCI	GTSAC	1 cut(s)	1046
NruI	TCGCGA	1 cut(s)	1356
PaeR7I	CTCGAG	1 cut(s)	858
PceI	AGGCCT	1 cut(s)	344
PciSI	GCTCTTC	2 cut(s)	925, 1560
PctI	GAATGC	2 cut(s)	236, 1215
PdmI	GAANNNNTTC	2 cut(s)	1554, 1770
PfeI	GAWTC	5 cut(s)	155, 798, 887, 1020, 1142
PflMI	CCANNNNNTGG	1 cut(s)	997
PfoI	TCCNGGA	2 cut(s)	192, 1618
PleI	GAGTC	1 cut(s)	1832
PpsI	GAGTC	1 cut(s)	1832
PshBI	ATTAAT	1 cut(s)	387
Psp124BI	GAGCTC	1 cut(s)	1374
Psp1406I	AACGTT	1 cut(s)	1697
Psp6I	CCWGG	3 cut(s)	506, 1404, 1869
PspFI	CCCAGC	1 cut(s)	146
PspGI	CCWGG	3 cut(s)	506, 1404, 1869
PspN4I	GGNNCC	8 cut(s)	536, 643, 1174, 1182, 1328, 1452, 1476, 2038
PspXI	VCTCGAGB	1 cut(s)	858
PstI	CTGCAG	1 cut(s)	448
PstNI	CAGNNNCTG	2 cut(s)	730, 1310
PsuI	RGATCY	7 cut(s)	13, 449, 832, 1077, 1180, 1326, 1615
PvuII	CAGCTG	3 cut(s)	443, 623, 1307
RruI	TCGCGA	1 cut(s)	1356
RsaI	GTAC	5 cut(s)	738, 1235, 1263, 1366, 1995
RsaNI	GTAC	5 cut(s)	737, 1234, 1262, 1365, 1994
RseI	CAYNNNNRTG	1 cut(s)	2101
SacI	GAGCTC	1 cut(s)	1374
SapI	GCTCTTC	2 cut(s)	925, 1560
SaqAI	TTAA	9 cut(s)	305, 365, 387, 404, 837, 1082, 1494, 1799, 2073
Sau3AI	GATC	9 cut(s)	13, 256, 449, 832, 1077, 1180, 1326, 1516, 1615
SchI	GAGTC	1 cut(s)	1833
ScrFI	CCNGG	5 cut(s)	194, 508, 1406, 1620, 1871
SduI	GDGCHC	1 cut(s)	1374
SfaNI	GCATC	5 cut(s)	368, 659, 1597, 1969, 2105
SfcI	CTRYAG	1 cut(s)	444
Sfr274I	CTCGAG	1 cut(s)	858
SlaI	CTCGAG	1 cut(s)	858
SmiMI	CAYNNNNRTG	1 cut(s)	2101
SmlI	CTYRAG	3 cut(s)	858, 1152, 1445
SmoI	CTYRAG	3 cut(s)	858, 1152, 1445
Sse9I	AATT	7 cut(s)	654, 774, 1192, 1347, 1386, 1398, 2020
SseBI	AGGCCT	1 cut(s)	344
SsiI	CCGC	7 cut(s)	38, 41, 46, 424, 639, 1925, 1970
SspI	AATATT	3 cut(s)	485, 987, 1900
SspMI	CTAG	3 cut(s)	17, 848, 1760
SstI	GAGCTC	1 cut(s)	1374
StuI	AGGCCT	1 cut(s)	344
StyD4I	CCNGG	5 cut(s)	192, 506, 1404, 1618, 1869
StyI	CCWWGG	6 cut(s)	645, 1176, 1330, 1983, 2066, 2091
TaaI	ACNGT	3 cut(s)	162, 787, 1597
TaiI	ACGT	1 cut(s)	1700
TaqI	TCGA	3 cut(s)	707, 859, 1905
TasI	AATT	7 cut(s)	654, 774, 1192, 1347, 1386, 1398, 2020
TatI	WGTACW	3 cut(s)	736, 1364, 1993
TauI	GCSGC	1 cut(s)	41
TfiI	GAWTC	5 cut(s)	155, 798, 887, 1020, 1142
Tru1I	TTAA	9 cut(s)	305, 365, 387, 404, 837, 1082, 1494, 1799, 2073
Tru9I	TTAA	9 cut(s)	305, 365, 387, 404, 837, 1082, 1494, 1799, 2073
TscAI	CASTG	5 cut(s)	165, 1051, 1606, 1890, 1959
TseFI	GTSAC	1 cut(s)	1046
TseI	GCWGC	9 cut(s)	79, 440, 443, 620, 721, 842, 1307, 1427, 1509
Tsp45I	GTSAC	1 cut(s)	1046
TspDTI	ATGAA	6 cut(s)	911, 996, 1074, 1155, 1205, 1779
TspRI	CASTG	5 cut(s)	165, 1051, 1606, 1890, 1959
Van91I	CCANNNNNTGG	1 cut(s)	997
VspI	ATTAAT	1 cut(s)	387
XapI	RAATTY	2 cut(s)	1192, 2020
XhoI	CTCGAG	1 cut(s)	858
XmiI	GTMKAC	1 cut(s)	1010
XmnI	GAANNNNTTC	2 cut(s)	1554, 1770
XspI	CTAG	3 cut(s)	17, 848, 1760

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.