Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0009306

Physical Location & Seq

Genomic Coordinates Forward (+)

21125347 .. 21127518

Gene Structure 2172 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g27480.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGACCGCCGCAGCTCCGATCAACGACCTCCCCGAGGCGATTCTCACCACCATCATCGCCTTGCTCTCCGACACCCGCACCCGCAACTCCGTCGCCCTCGTCTCCCGCAAATTCCGCACACTCGAGAGGACCACGCGCACCTCCCTCACGCTCCGCGGCAACGCGCGCGACCTCCACCTGATCCCGACCTGCTTCTCCTCCGTCACCGACCTCGACCTCTCCCTCCTCTCCCCCTGGGGCCACGCGCTGCTCTCCCCCTCCGCCTCCTCCACCGACCCCGCCCTCCTCGCCCACCGCCTCCGCCTCGCCTTCCCCTCCGTCACTTCCCTCACCGTCTACTCCCGATCCTCCTCCACCGTCGAGATCGTCGCCAGTCTCTGGCCGCGTTTGCGCCGCGTCAAGCTCGTCCGGTGGCACCAGCGCCCGCAGTCGAATCTCGGCGCCGACTTCGATCCTCTCTTCCAGCAGTGCCACGCTCTCTCCGATTTGGACTTGTCGGAATTCTACTACTGGACCGAGGACCTCCCTCCGATTCTGGAAGCCCATCCCAACGTGGCCAGGTCACTCACTAAGCTCAATCTCCTGACGGCGTCGTTTACCGAGGGTTTCAGAGCCACCGAGATCAGATCGATCACCGTGGCGTGCCCCAAGCTTCAGCAGCTCTTCGTTGCTTGTATGTTCGATCCCAGATACATGGGGTTCGTCGGGGAGGAGGCTCTTCTGTCCATCTCCACCAATTGTCCGGAGCTCAGAGTCGTCCACCTCATCGACACGTCGTCGTTGTTGAACGCGCGCGGCGATCCAAACGACGACGGTTTCACATTGGAAGACGCTCAGATTGGGCGCGCGGCTTTGGTGGACTTCTTCTCCGGGCTTCCGTTGCTGGAGGAGCTGGTGCTTGATGTGTGCAAGAATGTTAGAGATAGTGGACTAGCCTTGGAGGTTCTTGCTTCCAAGTGTCCGAGACTGAGAGCTCTCAAGCTTGGGCAGTTCCATGGGCTGTGCTCGGCGATTGGGTCCCGGCTCGACGGCATTGCTCTTTGTCATGGGCTGGAGTCGCTGTCTATTAAGAACTGTGGCGATTTGACGGATATGGGATTGATCGAAATTGCGAGAGGATGTTGTAAGCTTGCCAAGTTTGAGGTGTATGGATGCAAGAAGATTACAGTGAAAGGGTTGAGGACGCTGGCTTCTTTGTTGTGGAAGACGTTGGTTGACGTGAGCATATCTTGCTGTAAGAACCTGGATGCTGCGGCGTCAGTGCGTGCTCTGGAGCCAATTCGCGATCGGATTCAACGTCTTCACATAGATTGTGTCTGGCAGCGGGAGATTCCGCAGGATTTTGATCTCAATCAGGTCAATGATTATGATGTTGGTGATAATGATGGTGTTGCAGTGAGTCAGAATGGTAATGATTACATGAGTTGGTGTGATGCGTTCGAGCAGAGGATCAGCAAGAAGTGCAAGTATGGATCAGATGGGGACTGTTCCTATATGCCAACCAATGGCTATGCAAATGGGAATGGCCATGGTAATGGAAATGGGTTTTGGGGTGATGAGACTTGGGAAAGGCTGCACTACCTTTCACTTTGGATTGAGGTGGGTGACTTGCTGACATCATTGCCAGAGGTGGGTCTAGACGATTGTCCCAATTTGGAGGAGGTTCAGATCCGGGTAGAAGGCGATTGCAGGGGAAGGCACAAGCCCACACAGCGAGAATTTGGGTTGAGCTGCCTAGCCCGTTATCCTCAGCTGTCGAAGATGAAGCTGGACTGCGGTGATACTGTGGGATTTGCACTGACTGCTCCCCCAGGGCAGATGGACTTGTCGCTTTGGGAGAGGTTCTTTCTCAGTGGAATTGGGAACTTGAGTCTCAGCGAACTTGATTATTGGCCGCCTCAAGACAGGGATGTGAACCAGAGGAGTCTCTGGCTCCCAGCTGCTGGGTTGTTGGCAGAATGCATCACCCTGCGGAAGCTTTTCATCCATGGGACTGCTCACGAACATTTCATGATGTTCCTTGTGAGACCAGATCTCAACCTCAGCTTAAGGGATGTTCAGCTGCGAGAGGATTACTACCCAGCACCTGAAAATGAAATGAGTACAGAAATGAGGGTGGACTCGTGCTGTCGCTTTGAGGATGCACTCAACAGGCGTCCAATCCTTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006807 GO:0006810 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009628 GO:0009653 GO:0009914 GO:0009926 GO:0009934 GO:0009987 GO:0010016 GO:0010029 GO:0010035 GO:0010187 GO:0010817 GO:0016567 GO:0019005 GO:0019538 GO:0022603 GO:0031461 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0036211 GO:0042221 GO:0042335 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048367 GO:0048509 GO:0048518 GO:0048519 GO:0048580 GO:0048581 GO:0048583 GO:0048584 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051093 GO:0051179 GO:0051234 GO:0051239 GO:0051241 GO:0060918 GO:0065007 GO:0065008 GO:0070647 GO:0071704 GO:0080134 GO:1900140 GO:1901564 GO:1901700 GO:1902494 GO:1902584 GO:1990234 GO:2000026 GO:2000070

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

724

Amino Acids

80.73

Weight (kDa)

5.45

Isoelectric Point (pI)

43.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009306)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42620
fragaria_vesca	FvH4_2g05661 FvH4_2g12921 FvH4_4g05521 FvH4_6g27480
malus_domestica	MD09G1236800.v1.1 MD17G1266700.v1.1
prunus_persica	Prupe.3G117700_v2.0.a1
pyrus_communis	pycom09g15540
rosa_chinensis	RchiOBHm_Chr2g0128401 RchiOBHm_Chr2g0128411 RchiOBHm_Chr2g0129761
rosa_laevigata	RLG00000019101
rosa_multiflora	Rmu_ssc0000459.1_g000008
rosa_roxburghii	Rroxscaffold_2G00114320
rosa_rugosa	Rorug02G0289700
rosa_samantha	Rh2AG340400 Rh2BG348700 Rh2BG348900 Rh2CG327800 Rh2DG367200
rosa_wichuraiana	Rw2G027800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	197
AccB1I	GGYRCC	2 cut(s)	414, 440
AccB7I	CCANNNNNTGG	3 cut(s)	378, 1505, 1943
AccI	GTMKAC	1 cut(s)	336
AccIII	TCCGGA	1 cut(s)	742
AclWI	GGATC	8 cut(s)	175, 339, 446, 677, 794, 1457, 1480, 1663
AcoI	YGGCCR	4 cut(s)	380, 555, 1525, 1892
AcsI	RAATTY	3 cut(s)	110, 500, 1718
AcuI	CTGAAG	1 cut(s)	638
AcyI	GRCGYC	4 cut(s)	441, 590, 1256, 2155
AfaI	GTAC	1 cut(s)	2104
AfiI	CCNNNNNNNGG	5 cut(s)	34, 378, 1505, 1631, 1943
AflII	CTTAAG	1 cut(s)	2047
AflIII	ACRYGT	1 cut(s)	771
AgsI	TTSAA	2 cut(s)	787, 1295
AhdI	GACNNNNNGTC	1 cut(s)	775
AjiI	CACGTC	2 cut(s)	774, 1219
AjnI	CCWGG	4 cut(s)	233, 557, 1242, 1810
AjuI	GAANNNNNNNTTGG	2 cut(s)	1531, 1563
Alw21I	GWGCWC	4 cut(s)	750, 976, 1007, 1270
Alw26I	GTCTC	7 cut(s)	106, 380, 958, 1553, 1877, 1931, 2020
AlwI	GGATC	8 cut(s)	175, 339, 446, 677, 794, 1457, 1480, 1663
AlwNI	CAGNNNCTG	3 cut(s)	378, 1943, 2087
Ama87I	CYCGRG	2 cut(s)	32, 122
Aor13HI	TCCGGA	1 cut(s)	742
AoxI	GGCC	5 cut(s)	238, 380, 555, 1525, 1892
ApeKI	GCWGC	9 cut(s)	11, 247, 658, 1250, 1321, 1573, 1731, 1940, 2062
ApoI	RAATTY	3 cut(s)	110, 500, 1718
Asp700I	GAANNNNTTC	1 cut(s)	1979
AspS9I	GGNCC	5 cut(s)	129, 238, 513, 520, 1017
AsuC2I	CCSGG	3 cut(s)	871, 1021, 1673
AsuHPI	GGTGA	9 cut(s)	37, 196, 322, 625, 1388, 1565, 1616, 1790, 1957
AvaI	CYCGRG	2 cut(s)	32, 122
AvaII	GGWCC	4 cut(s)	129, 513, 520, 1017
BaeGI	GKGCMC	1 cut(s)	647
BalI	TGGCCA	2 cut(s)	557, 1527
BanI	GGYRCC	2 cut(s)	414, 440
BanII	GRGCYC	2 cut(s)	750, 976
BauI	CACGAG	1 cut(s)	2122
BbsI	GAAGAC	3 cut(s)	834, 1211, 1292
Bbv12I	GWGCWC	4 cut(s)	750, 976, 1007, 1270
BbvCI	CCTCAGC	2 cut(s)	1749, 2042
BbvI	GCAGC	9 cut(s)	23, 234, 670, 1237, 1333, 1560, 1718, 1927, 2049
BccI	CCATC	6 cut(s)	59, 552, 734, 1379, 1472, 1813
BceAI	ACGGC	2 cut(s)	603, 1045
BcgI	CGANNNNNNTGC	4 cut(s)	73, 107, 1016, 1050
BciT130I	CCWGG	4 cut(s)	235, 559, 1244, 1812
BcnI	CCSGG	3 cut(s)	871, 1021, 1673
BcoDI	GTCTC	7 cut(s)	106, 380, 958, 1553, 1877, 1931, 2020
BfaI	CTAG	3 cut(s)	932, 1637, 1736
BfoI	RGCGCY	2 cut(s)	424, 444
BfrI	CTTAAG	1 cut(s)	2047
BfuAI	ACCTGC	1 cut(s)	197
BglII	AGATCT	1 cut(s)	2032
Bme1390I	CCNGG	7 cut(s)	235, 559, 871, 1021, 1244, 1673, 1812
Bme18I	GGWCC	4 cut(s)	129, 513, 520, 1017
BmeRI	GACNNNNNGTC	1 cut(s)	775
BmeT110I	CYCGRG	2 cut(s)	32, 122
BmgBI	CACGTC	2 cut(s)	774, 1219
BmgT120I	GGNCC	5 cut(s)	129, 238, 513, 520, 1017
BmiI	GGNNCC	7 cut(s)	239, 416, 442, 1018, 1019, 1275, 1934
BmrFI	CCNGG	7 cut(s)	235, 559, 871, 1021, 1244, 1673, 1812
BmsI	GCATC	5 cut(s)	1142, 1237, 1423, 1971, 2131
BoxI	GACNNNNGTC	1 cut(s)	1644
BpiI	GAAGAC	3 cut(s)	834, 1211, 1292
BpmI	CTGGAG	3 cut(s)	905, 1073, 1292
Bpu10I	CCTNAGC	2 cut(s)	1749, 2042
BpuEI	CTTGAG	3 cut(s)	962, 1884, 1888
BpuMI	CCSGG	3 cut(s)	871, 1021, 1673
Bsa29I	ATCGAT	1 cut(s)	629
BsaBI	GATNNNNATC	2 cut(s)	1344, 1350
BsaHI	GRCGYC	4 cut(s)	441, 590, 1256, 2155
BsaI	GGTCTC	1 cut(s)	2020
BsaWI	WCCGGW	2 cut(s)	408, 742
BsaXI	ACNNNNNCTCC	6 cut(s)	464, 494, 851, 881, 1046, 1076
Bsc4I	CCNNNNNNNGG	5 cut(s)	34, 378, 1505, 1631, 1943
Bse1I	ACTGG	2 cut(s)	372, 515
Bse3DI	GCAATG	2 cut(s)	1032, 1619
Bse8I	GATNNNNATC	2 cut(s)	1344, 1350
BseAI	TCCGGA	1 cut(s)	742
BseBI	CCWGG	4 cut(s)	235, 559, 1244, 1812
BseCI	ATCGAT	1 cut(s)	629
BseGI	GGATG	8 cut(s)	544, 1124, 1157, 1252, 1915, 1983, 2059, 2146
BseJI	GATNNNNATC	2 cut(s)	1344, 1350
BseLI	CCNNNNNNNGG	5 cut(s)	34, 378, 1505, 1631, 1943
BseMI	GCAATG	2 cut(s)	1032, 1619
BseMII	CTCAG	7 cut(s)	763, 848, 959, 1763, 1864, 1888, 2056
BseNI	ACTGG	2 cut(s)	372, 515
BsePI	GCGCGC	3 cut(s)	164, 791, 844
BseRI	GAGGAG	9 cut(s)	187, 215, 256, 275, 340, 725, 902, 1673, 1936
BseSI	GKGCMC	1 cut(s)	647
BseXI	GCAGC	9 cut(s)	23, 234, 670, 1237, 1333, 1560, 1718, 1927, 2049
BseYI	CCCAGC	3 cut(s)	1936, 1943, 2080
BsgI	GTGCAG	1 cut(s)	1559
Bsh1285I	CGRYCG	1 cut(s)	1288
BshFI	GGCC	5 cut(s)	240, 382, 557, 1527, 1894
BshNI	GGYRCC	2 cut(s)	414, 440
BshVI	ATCGAT	1 cut(s)	629
BsiEI	CGRYCG	1 cut(s)	1288
BsiHKAI	GWGCWC	4 cut(s)	750, 976, 1007, 1270
BsiHKCI	CYCGRG	2 cut(s)	32, 122
BsiSI	CCGG	5 cut(s)	409, 743, 870, 1021, 1672
BslFI	GGGAC	4 cut(s)	1003, 1496, 1632, 2005
BslI	CCNNNNNNNGG	5 cut(s)	34, 378, 1505, 1631, 1943
BsmAI	GTCTC	7 cut(s)	106, 380, 958, 1553, 1877, 1931, 2020
BsmBI	CGTCTC	1 cut(s)	106
BsmFI	GGGAC	4 cut(s)	1003, 1496, 1632, 2005
BsmI	GAATGC	1 cut(s)	1964
BsnI	GGCC	5 cut(s)	240, 382, 557, 1527, 1894
Bso31I	GGTCTC	1 cut(s)	2020
BsoBI	CYCGRG	2 cut(s)	32, 122
Bsp1286I	GDGCHC	5 cut(s)	647, 750, 976, 1007, 1270
Bsp13I	TCCGGA	1 cut(s)	742
Bsp19I	CCATGG	3 cut(s)	994, 1528, 1987
Bsp68I	TCGCGA	1 cut(s)	1284
BspANI	GGCC	5 cut(s)	240, 382, 557, 1527, 1894
BspCNI	CTCAG	7 cut(s)	762, 847, 960, 1762, 1863, 1887, 2055
BspDI	ATCGAT	1 cut(s)	629
BspEI	TCCGGA	1 cut(s)	742
BspHI	TCATGA	1 cut(s)	2010
BspLI	GGNNCC	7 cut(s)	239, 416, 442, 1018, 1019, 1275, 1934
BspMI	ACCTGC	1 cut(s)	197
BspPI	GGATC	8 cut(s)	175, 339, 446, 677, 794, 1457, 1480, 1663
BspQI	GCTCTTC	2 cut(s)	668, 723
BspT107I	GGYRCC	2 cut(s)	414, 440
BspTI	CTTAAG	1 cut(s)	2047
BspTNI	GGTCTC	1 cut(s)	2020
BsrDI	GCAATG	2 cut(s)	1032, 1619
BsrI	ACTGG	2 cut(s)	372, 515
BssHII	GCGCGC	3 cut(s)	164, 791, 844
BssNI	GRCGYC	4 cut(s)	441, 590, 1256, 2155
BssSI	CACGAG	1 cut(s)	2122
BssT1I	CCWWGG	4 cut(s)	936, 994, 1528, 1987
Bst2BI	CACGAG	1 cut(s)	2122
Bst2UI	CCWGG	4 cut(s)	235, 559, 1244, 1812
Bst4CI	ACNGT	8 cut(s)	334, 358, 637, 815, 1076, 1168, 1487, 1786
Bst6I	CTCTTC	3 cut(s)	464, 668, 723
BstACI	GRCGYC	4 cut(s)	441, 590, 1256, 2155
BstAFI	CTTAAG	1 cut(s)	2047
BstAPI	GCANNNNNTGC	3 cut(s)	1230, 1461, 1802
BstC8I	GCNNGC	8 cut(s)	166, 425, 643, 793, 846, 1131, 1188, 1266
BstDEI	CTNAG	8 cut(s)	570, 749, 834, 968, 1749, 1850, 1874, 2042
BstDSI	CCRYGG	5 cut(s)	154, 636, 994, 1528, 1987
BstENI	CCTNNNNNAGG	1 cut(s)	32
BstF5I	GGATG	8 cut(s)	544, 1124, 1157, 1252, 1915, 1983, 2059, 2146
BstH2I	RGCGCY	2 cut(s)	424, 444
BstMAI	GTCTC	7 cut(s)	106, 380, 958, 1553, 1877, 1931, 2020
BstMCI	CGRYCG	1 cut(s)	1288
BstNI	CCWGG	4 cut(s)	235, 559, 1244, 1812
BstPAI	GACNNNNGTC	1 cut(s)	1644
BstSCI	CCNGG	7 cut(s)	233, 557, 869, 1019, 1242, 1671, 1810
BstSLI	GKGCMC	1 cut(s)	647
BstV1I	GCAGC	9 cut(s)	23, 234, 670, 1237, 1333, 1560, 1718, 1927, 2049
BstV2I	GAAGAC	3 cut(s)	834, 1211, 1292
BstX2I	RGATCY	2 cut(s)	1668, 2032
BstXI	CCANNNNNNTGG	2 cut(s)	694, 1535
BstYI	RGATCY	2 cut(s)	1668, 2032
Bsu15I	ATCGAT	1 cut(s)	629
BsuRI	GGCC	5 cut(s)	240, 382, 557, 1527, 1894
BsuTUI	ATCGAT	1 cut(s)	629
BtgI	CCRYGG	5 cut(s)	154, 636, 994, 1528, 1987
BtgZI	GCGATG	1 cut(s)	40
BtrI	CACGTC	2 cut(s)	774, 1219
BtsCI	GGATG	8 cut(s)	544, 1124, 1157, 1252, 1915, 1983, 2059, 2146
BtsI	GCAGTG	2 cut(s)	473, 1401
BtsIMutI	CAGTG	6 cut(s)	473, 1173, 1266, 1401, 1796, 1858
BtuMI	TCGCGA	1 cut(s)	1284
BveI	ACCTGC	1 cut(s)	197
Cac8I	GCNNGC	8 cut(s)	166, 425, 643, 793, 846, 1131, 1188, 1266
CaiI	CAGNNNCTG	3 cut(s)	378, 1943, 2087
CciI	TCATGA	1 cut(s)	2010
Cfr13I	GGNCC	5 cut(s)	129, 238, 513, 520, 1017
Cfr42I	CCGCGG	1 cut(s)	157
ClaI	ATCGAT	1 cut(s)	629
CseI	GACGC	6 cut(s)	385, 579, 839, 1192, 1245, 2144
Csp6I	GTAC	1 cut(s)	2103
CviAII	CATG	7 cut(s)	694, 995, 1046, 1420, 1529, 1988, 2011
CviQI	GTAC	1 cut(s)	2103
DdeI	CTNAG	8 cut(s)	570, 749, 834, 968, 1749, 1850, 1874, 2042
DinI	GGCGCC	1 cut(s)	442
DriI	GACNNNNNGTC	1 cut(s)	775
EaeI	YGGCCR	4 cut(s)	380, 555, 1525, 1892
Eam1104I	CTCTTC	3 cut(s)	464, 668, 723
Eam1105I	GACNNNNNGTC	1 cut(s)	775
EarI	CTCTTC	3 cut(s)	464, 668, 723
EciI	GGCGGA	2 cut(s)	250, 290
Ecl136II	GAGCTC	2 cut(s)	748, 974
Eco130I	CCWWGG	4 cut(s)	936, 994, 1528, 1987
Eco24I	GRGCYC	2 cut(s)	750, 976
Eco31I	GGTCTC	1 cut(s)	2020
Eco47I	GGWCC	4 cut(s)	129, 513, 520, 1017
Eco53kI	GAGCTC	2 cut(s)	748, 974
Eco57I	CTGAAG	1 cut(s)	638
Eco88I	CYCGRG	2 cut(s)	32, 122
EcoICRI	GAGCTC	2 cut(s)	748, 974
EcoNI	CCTNNNNNAGG	1 cut(s)	32
EcoO109I	RGGNCCY	2 cut(s)	520, 1017
EcoRI	GAATTC	1 cut(s)	500
EcoRII	CCWGG	4 cut(s)	233, 557, 1242, 1810
EcoT14I	CCWWGG	4 cut(s)	936, 994, 1528, 1987
EcoT22I	ATGCAT	1 cut(s)	1964
EcoT38I	GRGCYC	2 cut(s)	750, 976
EgeI	GGCGCC	1 cut(s)	442
EheI	GGCGCC	1 cut(s)	442
ErhI	CCWWGG	4 cut(s)	936, 994, 1528, 1987
Esp3I	CGTCTC	1 cut(s)	106
FaeI	CATG	7 cut(s)	697, 998, 1049, 1423, 1532, 1991, 2014
FaqI	GGGAC	4 cut(s)	1003, 1496, 1632, 2005
FatI	CATG	7 cut(s)	693, 994, 1045, 1419, 1528, 1987, 2010
FauI	CCCGC	6 cut(s)	83, 89, 113, 286, 432, 1317
FblI	GTMKAC	1 cut(s)	336
FokI	GGATG	8 cut(s)	531, 1131, 1164, 1259, 1922, 1970, 2066, 2153
FriOI	GRGCYC	2 cut(s)	750, 976
FspBI	CTAG	3 cut(s)	932, 1637, 1736
GsaI	CCCAGC	3 cut(s)	1940, 1947, 2084
GsuI	CTGGAG	3 cut(s)	905, 1073, 1292
HaeII	RGCGCY	2 cut(s)	424, 444
HaeIII	GGCC	5 cut(s)	240, 382, 557, 1527, 1894
HapII	CCGG	5 cut(s)	409, 743, 870, 1021, 1672
HgaI	GACGC	6 cut(s)	385, 579, 839, 1192, 1245, 2144
Hin1I	GRCGYC	4 cut(s)	441, 590, 1256, 2155
Hin1II	CATG	7 cut(s)	697, 998, 1049, 1423, 1532, 1991, 2014
HincII	GTYRAC	1 cut(s)	1216
HindII	GTYRAC	1 cut(s)	1216
HindIII	AAGCTT	4 cut(s)	650, 980, 1127, 1976
HpaII	CCGG	5 cut(s)	409, 743, 870, 1021, 1672
HphI	GGTGA	9 cut(s)	37, 196, 322, 625, 1388, 1565, 1616, 1790, 1957
Hpy166II	GTNNAC	8 cut(s)	337, 597, 760, 859, 929, 1216, 1915, 2119
Hpy8I	GTNNAC	8 cut(s)	337, 597, 760, 859, 929, 1216, 1915, 2119
HpyAV	CCTTC	3 cut(s)	319, 1673, 1689
HpyCH4III	ACNGT	8 cut(s)	334, 358, 637, 815, 1076, 1168, 1487, 1786
HpyCH4IV	ACGT	5 cut(s)	552, 773, 1208, 1218, 1297
HpyF3I	CTNAG	8 cut(s)	570, 749, 834, 968, 1749, 1850, 1874, 2042
HpySE526I	ACGT	5 cut(s)	552, 773, 1208, 1218, 1297
Hsp92I	GRCGYC	4 cut(s)	441, 590, 1256, 2155
Hsp92II	CATG	7 cut(s)	697, 998, 1049, 1423, 1532, 1991, 2014
KasI	GGCGCC	1 cut(s)	440
KflI	GGGWCCC	1 cut(s)	1017
Kpn2I	TCCGGA	1 cut(s)	742
KspI	CCGCGG	1 cut(s)	157
LguI	GCTCTTC	2 cut(s)	668, 723
LmnI	GCTCC	7 cut(s)	19, 156, 745, 889, 1273, 1810, 1938
Lsp1109I	GCAGC	9 cut(s)	23, 234, 670, 1237, 1333, 1560, 1718, 1927, 2049
LweI	GCATC	5 cut(s)	1142, 1237, 1423, 1971, 2131
MaeI	CTAG	3 cut(s)	932, 1637, 1736
MaeII	ACGT	5 cut(s)	552, 773, 1208, 1218, 1297
MaeIII	GTNAC	4 cut(s)	202, 319, 561, 1604
MauBI	CGCGCGCG	2 cut(s)	164, 791
MboII	GAAGA	9 cut(s)	451, 655, 710, 839, 856, 1171, 1216, 1292, 1771
MfeI	CAATTG	1 cut(s)	736
MflI	RGATCY	2 cut(s)	1668, 2032
MhlI	GDGCHC	5 cut(s)	647, 750, 976, 1007, 1270
MlsI	TGGCCA	2 cut(s)	557, 1527
MluCI	AATT	8 cut(s)	110, 500, 736, 1107, 1278, 1651, 1718, 1857
MluNI	TGGCCA	2 cut(s)	557, 1527
Mly113I	GGCGCC	1 cut(s)	441
MlyI	GAGTC	6 cut(s)	762, 1064, 1408, 1879, 1933, 2114
MmeI	TCCRAC	2 cut(s)	93, 477
Mox20I	TGGCCA	2 cut(s)	557, 1527
Mph1103I	ATGCAT	1 cut(s)	1964
MroI	TCCGGA	1 cut(s)	742
MroXI	GAANNNNTTC	1 cut(s)	1979
MscI	TGGCCA	2 cut(s)	557, 1527
MseI	TTAA	2 cut(s)	1068, 2048
MslI	CAYNNNNRTG	1 cut(s)	1533
Msp20I	TGGCCA	2 cut(s)	557, 1527
MspA1I	CMGCKG	5 cut(s)	156, 1324, 1753, 1940, 2062
MspCI	CTTAAG	1 cut(s)	2047
MspI	CCGG	5 cut(s)	409, 743, 870, 1021, 1672
MspR9I	CCNGG	7 cut(s)	235, 559, 871, 1021, 1244, 1673, 1812
MunI	CAATTG	1 cut(s)	736
Mva1269I	GAATGC	1 cut(s)	1964
MvaI	CCWGG	4 cut(s)	235, 559, 1244, 1812
NarI	GGCGCC	1 cut(s)	441
NciI	CCSGG	3 cut(s)	871, 1021, 1673
NcoI	CCATGG	3 cut(s)	994, 1528, 1987
NlaIII	CATG	7 cut(s)	697, 998, 1049, 1423, 1532, 1991, 2014
NlaIV	GGNNCC	7 cut(s)	239, 416, 442, 1018, 1019, 1275, 1934
NmeAIII	GCCGAG	2 cut(s)	417, 986
NmuCI	GTSAC	4 cut(s)	202, 319, 561, 1604
NruI	TCGCGA	1 cut(s)	1284
NsiI	ATGCAT	1 cut(s)	1964
PaeR7I	CTCGAG	1 cut(s)	122
PagI	TCATGA	1 cut(s)	2010
PasI	CCCWGGG	2 cut(s)	234, 1811
PauI	GCGCGC	3 cut(s)	164, 791, 844
PciSI	GCTCTTC	2 cut(s)	668, 723
PcsI	WCGNNNNNNNCGW	4 cut(s)	30, 480, 795, 1294
PctI	GAATGC	1 cut(s)	1964
PdmI	GAANNNNTTC	1 cut(s)	1979
PfeI	GAWTC	5 cut(s)	40, 433, 532, 1291, 1330
PflFI	GACNNNGTC	1 cut(s)	589
PflMI	CCANNNNNTGG	3 cut(s)	378, 1505, 1943
Ple19I	CGATCG	1 cut(s)	1288
PleI	GAGTC	6 cut(s)	761, 1063, 1407, 1878, 1932, 2114
PluTI	GGCGCC	1 cut(s)	444
PpsI	GAGTC	6 cut(s)	761, 1063, 1407, 1878, 1932, 2114
PpuMI	RGGWCCY	2 cut(s)	520, 1017
PshAI	GACNNNNGTC	1 cut(s)	1644
Psp124BI	GAGCTC	2 cut(s)	750, 976
Psp5II	RGGWCCY	2 cut(s)	520, 1017
Psp6I	CCWGG	4 cut(s)	233, 557, 1242, 1810
PspFI	CCCAGC	3 cut(s)	1936, 1943, 2080
PspGI	CCWGG	4 cut(s)	233, 557, 1242, 1810
PspN4I	GGNNCC	7 cut(s)	239, 416, 442, 1018, 1019, 1275, 1934
PspPI	GGNCC	5 cut(s)	129, 238, 513, 520, 1017
PspPPI	RGGWCCY	2 cut(s)	520, 1017
PstNI	CAGNNNCTG	3 cut(s)	378, 1943, 2087
PsuI	RGATCY	2 cut(s)	1668, 2032
PsyI	GACNNNGTC	1 cut(s)	589
PteI	GCGCGC	3 cut(s)	164, 791, 844
PvuI	CGATCG	1 cut(s)	1288
PvuII	CAGCTG	3 cut(s)	1753, 1940, 2062
RruI	TCGCGA	1 cut(s)	1284
RsaI	GTAC	1 cut(s)	2104
RsaNI	GTAC	1 cut(s)	2103
RseI	CAYNNNNRTG	1 cut(s)	1533
SacI	GAGCTC	2 cut(s)	750, 976
SacII	CCGCGG	1 cut(s)	157
SapI	GCTCTTC	2 cut(s)	668, 723
SaqAI	TTAA	2 cut(s)	1068, 2048
Sau96I	GGNCC	5 cut(s)	129, 238, 513, 520, 1017
SchI	GAGTC	6 cut(s)	762, 1064, 1408, 1879, 1933, 2114
ScrFI	CCNGG	7 cut(s)	235, 559, 871, 1021, 1244, 1673, 1812
SduI	GDGCHC	5 cut(s)	647, 750, 976, 1007, 1270
SfaNI	GCATC	5 cut(s)	1142, 1237, 1423, 1971, 2131
SfoI	GGCGCC	1 cut(s)	442
Sfr274I	CTCGAG	1 cut(s)	122
Sfr303I	CCGCGG	1 cut(s)	157
SgrBI	CCGCGG	1 cut(s)	157
SinI	GGWCC	4 cut(s)	129, 513, 520, 1017
SlaI	CTCGAG	1 cut(s)	122
SmiMI	CAYNNNNRTG	1 cut(s)	1533
SmlI	CTYRAG	5 cut(s)	122, 977, 1867, 1899, 2047
SmoI	CTYRAG	5 cut(s)	122, 977, 1867, 1899, 2047
Sse9I	AATT	8 cut(s)	110, 500, 736, 1107, 1278, 1651, 1718, 1857
SspDI	GGCGCC	1 cut(s)	440
SspMI	CTAG	3 cut(s)	932, 1637, 1736
SstI	GAGCTC	2 cut(s)	750, 976
StyD4I	CCNGG	7 cut(s)	233, 557, 869, 1019, 1242, 1671, 1810
StyI	CCWWGG	4 cut(s)	936, 994, 1528, 1987
TaaI	ACNGT	8 cut(s)	334, 358, 637, 815, 1076, 1168, 1487, 1786
TaiI	ACGT	5 cut(s)	555, 776, 1211, 1221, 1300
TaqII	GACCGA	1 cut(s)	530
TasI	AATT	8 cut(s)	110, 500, 736, 1107, 1278, 1651, 1718, 1857
TatI	WGTACW	1 cut(s)	2102
TauI	GCSGC	8 cut(s)	11, 159, 385, 396, 798, 851, 1256, 1897
TfiI	GAWTC	5 cut(s)	40, 433, 532, 1291, 1330
Tru1I	TTAA	2 cut(s)	1068, 2048
Tru9I	TTAA	2 cut(s)	1068, 2048
TscAI	CASTG	6 cut(s)	473, 1173, 1266, 1401, 1803, 1858
TseFI	GTSAC	4 cut(s)	202, 319, 561, 1604
TseI	GCWGC	9 cut(s)	11, 247, 658, 1250, 1321, 1573, 1731, 1940, 2062
Tsp45I	GTSAC	4 cut(s)	202, 319, 561, 1604
TspDTI	ATGAA	4 cut(s)	1778, 1972, 1999, 2109
TspGWI	ACGGA	5 cut(s)	79, 190, 307, 867, 1103
TspRI	CASTG	6 cut(s)	473, 1173, 1266, 1401, 1803, 1858
Tth111I	GACNNNGTC	1 cut(s)	589
Van91I	CCANNNNNTGG	3 cut(s)	378, 1505, 1943
Vha464I	CTTAAG	1 cut(s)	2047
VpaK11BI	GGWCC	4 cut(s)	129, 513, 520, 1017
XagI	CCTNNNNNAGG	1 cut(s)	32
XapI	RAATTY	3 cut(s)	110, 500, 1718
XbaI	TCTAGA	1 cut(s)	1636
XhoI	CTCGAG	1 cut(s)	122
XmiI	GTMKAC	1 cut(s)	336
XmnI	GAANNNNTTC	1 cut(s)	1979
XspI	CTAG	3 cut(s)	932, 1637, 1736
Zsp2I	ATGCAT	1 cut(s)	1964

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.