Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0009306

Physical Location & Seq

Genomic Coordinates Forward (+)

46414615 .. 46416786

Gene Structure 2172 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000019101

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGAGCGCCGCCGCCGCTCCGATCACTGAACTGCCGGAGGCGATTCTCGCCACCATCATCGGCTTGGTCTCCGACACCCGCTCCCGCAACTCAGTCGCCCTCGTCTGCCGCAAATTCCGCAGCCTCGAGAGAGCCACGCGCACCTCCCTCACGCTCCGCGGCAACGCTCGCGACCTCCACCTGATCCCGACCTGCTTCACCTCCGTCTCCGACCTCGACCTCTCCCTCCTCTCGCCGTGGGGCCACGCGCTGCTCTCCCCCTCCGCCTCCTCCACTGACCCCGCCCTCCTCGCCCACCGCCTCCGCGTCGCCTTCCCCTCCGTCACCTCCCTCACCGTCTACTCACGATCCTCCTCCACCGTCCAGATTGTCGCCAATCTCTGGCCGGGACTCCGCCGCGTCAAGCTCGTCCGATGGCATCAACGGCCGCAGTCGCCTCTCGGAGCCGACTTCGATCCTCTCTTCCAGCAATGCCAGACTCTCTCCGATTTGGACTTGTCGGAATTCTACTACTGGACGGAGGACCTCCCTCCGGTTCTGGAAGCCCATCCCAACGTGGCCCGCTCTCTCACCAAGCTTAATCTCCTAACGGCGTCGTTTACCGAGGGTTTCAGAGCCAACGAGATCCGATCCATCACCGAGGCCTGCCCCAAGCTTCAGCAGCTCTTCGTTGCCTGTATGTTTGATCCCAGATACATAGGGTTCGTCGGGGAGGAGGCTCTCTTGGCCATATCGACCAATTGTCGGGATCTCAGAATTGTCCATCTCATCGATACGTCGTCGTTGGCCAACGCGCGTGGGGATCCAAACGACGACGGTTTCACATCGGAGGACGCTCAGATTGGGCGGGCGGCTTTGATCGACTTCTTCTCCGGGCTTCCTCTGCTGGAAGAGCTGGTACTAGATGTGTGTAAGAACGTGAGGGACAGTGGACTGGCCTTGGAGGTTCTTGCTTCCAAGTGTCCCAGACTGAGAGCTCTTAAGGTTGGGCAGTTCCATGGGCTGTGCTCGGCGGTTGGGTCCCAGCTCGATGGCATTGCTCTCTGTCATGGGCTGGAGTCACTGTCGATTAAGAACTCTGCGGATTTGACAGATATGGGATTGATCGAAATCGCGAGAGGGTGTTGTAAGCTTGCCAAGTTTGAGGTGTATGGATGCAAGAAAATTACGGTGAAGGGGTTGAGGACGCTGGCTTGTTTGTTGAGGAAGACTTTAGTTGATGTGAGCATATCTTGCTGTAAGAACCTGGATGCTGCTGGCTCAGTGTGTGCTCTGGAGCCAATTCGCGATCGGATTCAACGTCTGCACATAGATTGTGTCTGGCCACGGGACTTTGATCTCAATCAAGTCAATGATTATGATGTTGGTGATGATGAAAGTGTTGTGATGAGTCGGAATGGTAATGATGACATGGACCTGAAATGGAGTGATGAGTACGAGCACAGGATGAGCAAGAAGTGCAAGTATGGATCAGATGGGGACTGTTCCTATATGCCAACCAATGGCTACGCGAATGGAAATGGCCATGGTGATGGAAATGGGTTTTGGAGTGATGAGACTTGGGAAAGGCTGCACTACCTATCACTTTGGATTGAGGTGGGGGAGTTGCTGACATCATTGCCAGAGGTGGGTCTGGACGAGTGCCCCAATCTGGAGGAGATTCAGATCCGGGTCGAAGGCGATTGCAGGGGAAGGCACAAGCCCACACAGCGAGAATTCGGGTTGAGCTGCCTATCCCGTTTTCCTCGGCTGTCAAAGATGAAGCTGGATTGTGGTGATACTGTGGGATTTGCACTGACTGCTCCACCAGGACAGATGGACTTGTCACTTTGGGAGAGGTTCTTCCTCTCTGGGATTGGAGACTTGAGTCTCAGCGAAGTCGATTACTGGCCACCTCAAGACCGGGATGTGAACCAGAGGAGTCTCTGGCTTCCAGCCGCCGGATTGCTGGCAGAATGCATCACACTCCGGAAGCTTTTCATCCATGGGACTGCTCACGAACATTTCATGATGTTCCTTGTGAGAAACCCAAACCTCAACCTCAGCTTAAGGGATGTGCAACTGAGAGAGGATTACTATCCAGCGCCCGAAAATGAAATGAGTACAGAGATGAGGGTGGACTCGTGCTGTCGCTTTGAAGATGCGCTGAACAGGCGCCCAATCCTTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006807 GO:0006810 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009628 GO:0009653 GO:0009914 GO:0009926 GO:0009934 GO:0009987 GO:0010016 GO:0010029 GO:0010035 GO:0010187 GO:0010817 GO:0016567 GO:0019005 GO:0019538 GO:0022603 GO:0031461 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0036211 GO:0042221 GO:0042335 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048367 GO:0048509 GO:0048518 GO:0048519 GO:0048580 GO:0048581 GO:0048583 GO:0048584 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051093 GO:0051179 GO:0051234 GO:0051239 GO:0051241 GO:0060918 GO:0065007 GO:0065008 GO:0070647 GO:0071704 GO:0080134 GO:1900140 GO:1901564 GO:1901700 GO:1902494 GO:1902584 GO:1990234 GO:2000026 GO:2000070

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

724

Amino Acids

80.6

Weight (kDa)

5.36

Isoelectric Point (pI)

44.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box_5	PF18511	10 - 48	4e-07	F-box

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009306)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42620
fragaria_vesca	FvH4_2g05661 FvH4_2g12921 FvH4_4g05521 FvH4_6g27480
malus_domestica	MD09G1236800.v1.1 MD17G1266700.v1.1
prunus_persica	Prupe.3G117700_v2.0.a1
pyrus_communis	pycom09g15540
rosa_chinensis	RchiOBHm_Chr2g0128401 RchiOBHm_Chr2g0128411 RchiOBHm_Chr2g0129761
rosa_laevigata	RLG00000019101
rosa_multiflora	Rmu_ssc0000459.1_g000008
rosa_roxburghii	Rroxscaffold_2G00114320
rosa_rugosa	Rorug02G0289700
rosa_samantha	Rh2AG340400 Rh2BG348700 Rh2BG348900 Rh2CG327800 Rh2DG367200
rosa_wichuraiana	Rw2G027800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	200
AccB1I	GGYRCC	1 cut(s)	2154
AccB7I	CCANNNNNTGG	2 cut(s)	381, 1502
AccBSI	CCGCTC	3 cut(s)	17, 81, 564
AccI	GTMKAC	1 cut(s)	339
AccIII	TCCGGA	1 cut(s)	1968
AcoI	YGGCCR	7 cut(s)	383, 425, 726, 786, 1322, 1522, 1889
AcsI	RAATTY	3 cut(s)	113, 503, 1715
AcuI	CTGAAG	1 cut(s)	641
AcyI	GRCGYC	2 cut(s)	593, 2155
AfaI	GTAC	3 cut(s)	900, 1436, 2104
AfiI	CCNNNNNNNGG	7 cut(s)	381, 532, 744, 1502, 1628, 1651, 1940
AflII	CTTAAG	2 cut(s)	980, 2047
AgsI	TTSAA	2 cut(s)	1298, 2138
AhdI	GACNNNNNGTC	1 cut(s)	741
AjnI	CCWGG	2 cut(s)	1245, 1807
AjuI	GAANNNNNNNTTGG	2 cut(s)	1528, 1560
Alw21I	GWGCWC	4 cut(s)	979, 1010, 1273, 1443
Alw26I	GTCTC	6 cut(s)	73, 211, 1550, 1854, 1874, 1928
Ama87I	CYCGRG	1 cut(s)	125
Aor13HI	TCCGGA	1 cut(s)	1968
ApeKI	GCWGC	6 cut(s)	120, 250, 661, 1253, 1570, 1728
ApoI	RAATTY	3 cut(s)	113, 503, 1715
Asp700I	GAANNNNTTC	1 cut(s)	1976
AspLEI	GCGC	7 cut(s)	8, 141, 250, 796, 2086, 2146, 2157
AspS9I	GGNCC	5 cut(s)	241, 523, 559, 1020, 1414
AsuC2I	CCSGG	4 cut(s)	387, 874, 1670, 1904
AsuHPI	GGTGA	9 cut(s)	190, 316, 325, 562, 628, 1183, 1379, 1541, 1787
AvaI	CYCGRG	1 cut(s)	125
AvaII	GGWCC	3 cut(s)	523, 1020, 1414
BaeGI	GKGCMC	1 cut(s)	1646
BalI	TGGCCA	5 cut(s)	728, 788, 1324, 1524, 1891
BamHI	GGATCC	1 cut(s)	802
BanI	GGYRCC	1 cut(s)	2154
BanII	GRGCYC	1 cut(s)	979
BarI	GAAGNNNNNNTAC	2 cut(s)	882, 914
BauI	CACGAG	1 cut(s)	2122
BbsI	GAAGAC	1 cut(s)	1214
Bbv12I	GWGCWC	4 cut(s)	979, 1010, 1273, 1443
BbvCI	CCTCAGC	1 cut(s)	2042
BbvI	GCAGC	6 cut(s)	132, 237, 673, 1240, 1557, 1715
BccI	CCATC	9 cut(s)	62, 408, 555, 641, 771, 1025, 1469, 1526, 1810
BceAI	ACGGC	3 cut(s)	220, 440, 606
BcgI	CGANNNNNNTGC	4 cut(s)	76, 110, 1019, 1053
BciT130I	CCWGG	2 cut(s)	1247, 1809
BcnI	CCSGG	4 cut(s)	387, 874, 1670, 1904
BcoDI	GTCTC	6 cut(s)	73, 211, 1550, 1854, 1874, 1928
BfaI	CTAG	1 cut(s)	902
BfoI	RGCGCY	3 cut(s)	9, 2087, 2158
BfrI	CTTAAG	2 cut(s)	980, 2047
BfuAI	ACCTGC	1 cut(s)	200
Bme1390I	CCNGG	6 cut(s)	387, 874, 1247, 1670, 1809, 1904
Bme18I	GGWCC	3 cut(s)	523, 1020, 1414
BmeRI	GACNNNNNGTC	1 cut(s)	741
BmeT110I	CYCGRG	1 cut(s)	125
BmgT120I	GGNCC	5 cut(s)	241, 523, 559, 1020, 1414
BmiI	GGNNCC	7 cut(s)	242, 445, 804, 1021, 1022, 1278, 2156
BmrFI	CCNGG	6 cut(s)	387, 874, 1247, 1670, 1809, 1904
BmsI	GCATC	5 cut(s)	427, 1145, 1240, 1968, 2131
BoxI	GACNNNNGTC	1 cut(s)	1866
BpiI	GAAGAC	1 cut(s)	1214
BpmI	CTGGAG	3 cut(s)	1076, 1295, 1673
Bpu10I	CCTNAGC	1 cut(s)	2042
BpuEI	CTTGAG	2 cut(s)	1881, 1885
BpuMI	CCSGG	4 cut(s)	387, 874, 1670, 1904
Bsa29I	ATCGAT	1 cut(s)	771
BsaBI	GATNNNNATC	4 cut(s)	1109, 1341, 1664, 2076
BsaHI	GRCGYC	2 cut(s)	593, 2155
BsaI	GGTCTC	1 cut(s)	73
BsaWI	WCCGGW	2 cut(s)	532, 1968
BsaXI	ACNNNNNCTCC	6 cut(s)	65, 95, 854, 884, 1049, 1079
Bsc4I	CCNNNNNNNGG	7 cut(s)	381, 532, 744, 1502, 1628, 1651, 1940
Bse1I	ACTGG	3 cut(s)	518, 939, 1892
Bse3DI	GCAATG	3 cut(s)	476, 1035, 1616
Bse8I	GATNNNNATC	4 cut(s)	1109, 1341, 1664, 2076
BseAI	TCCGGA	1 cut(s)	1968
BseBI	CCWGG	2 cut(s)	1247, 1809
BseCI	ATCGAT	1 cut(s)	771
BseGI	GGATG	7 cut(s)	547, 1160, 1255, 1452, 1912, 1980, 2059
BseJI	GATNNNNATC	4 cut(s)	1109, 1341, 1664, 2076
BseLI	CCNNNNNNNGG	7 cut(s)	381, 532, 744, 1502, 1628, 1651, 1940
BseMI	GCAATG	3 cut(s)	476, 1035, 1616
BseMII	CTCAG	8 cut(s)	105, 766, 851, 962, 1275, 1885, 2054, 2056
BseNI	ACTGG	3 cut(s)	518, 939, 1892
BseRI	GAGGAG	7 cut(s)	218, 259, 278, 343, 728, 1670, 1933
BseSI	GKGCMC	1 cut(s)	1646
BseX3I	CGGCCG	1 cut(s)	425
BseXI	GCAGC	6 cut(s)	132, 237, 673, 1240, 1557, 1715
BseYI	CCCAGC	1 cut(s)	1023
BsgI	GTGCAG	2 cut(s)	1289, 1556
Bsh1285I	CGRYCG	2 cut(s)	428, 1291
BshNI	GGYRCC	1 cut(s)	2154
BshVI	ATCGAT	1 cut(s)	771
BsiEI	CGRYCG	2 cut(s)	428, 1291
BsiHKAI	GWGCWC	4 cut(s)	979, 1010, 1273, 1443
BsiHKCI	CYCGRG	1 cut(s)	125
BsiSI	CCGG	8 cut(s)	35, 386, 533, 873, 1669, 1903, 1941, 1969
BslFI	GGGAC	7 cut(s)	402, 938, 948, 1006, 1343, 1493, 2002
BslI	CCNNNNNNNGG	7 cut(s)	381, 532, 744, 1502, 1628, 1651, 1940
BsmAI	GTCTC	6 cut(s)	73, 211, 1550, 1854, 1874, 1928
BsmBI	CGTCTC	1 cut(s)	211
BsmFI	GGGAC	7 cut(s)	402, 938, 948, 1006, 1343, 1493, 2002
BsmI	GAATGC	1 cut(s)	1961
Bso31I	GGTCTC	1 cut(s)	73
BsoBI	CYCGRG	1 cut(s)	125
Bsp1286I	GDGCHC	5 cut(s)	979, 1010, 1273, 1443, 1646
Bsp13I	TCCGGA	1 cut(s)	1968
Bsp19I	CCATGG	3 cut(s)	997, 1525, 1984
Bsp68I	TCGCGA	3 cut(s)	171, 1115, 1287
BspCNI	CTCAG	8 cut(s)	104, 765, 850, 963, 1274, 1884, 2055, 2055
BspDI	ATCGAT	1 cut(s)	771
BspEI	TCCGGA	1 cut(s)	1968
BspHI	TCATGA	1 cut(s)	2007
BspLI	GGNNCC	7 cut(s)	242, 445, 804, 1021, 1022, 1278, 2156
BspMI	ACCTGC	1 cut(s)	200
BspQI	GCTCTTC	2 cut(s)	671, 885
BspT107I	GGYRCC	1 cut(s)	2154
BspTI	CTTAAG	2 cut(s)	980, 2047
BspTNI	GGTCTC	1 cut(s)	73
BsrBI	CCGCTC	3 cut(s)	17, 81, 564
BsrDI	GCAATG	3 cut(s)	476, 1035, 1616
BsrI	ACTGG	3 cut(s)	518, 939, 1892
BssNI	GRCGYC	2 cut(s)	593, 2155
BssSI	CACGAG	1 cut(s)	2122
BssT1I	CCWWGG	4 cut(s)	939, 997, 1525, 1984
Bst2BI	CACGAG	1 cut(s)	2122
Bst2UI	CCWGG	2 cut(s)	1247, 1809
Bst4CI	ACNGT	8 cut(s)	337, 361, 818, 929, 1065, 1171, 1484, 1783
Bst6I	CTCTTC	3 cut(s)	467, 671, 885
BstACI	GRCGYC	2 cut(s)	593, 2155
BstAFI	CTTAAG	2 cut(s)	980, 2047
BstAPI	GCANNNNNTGC	3 cut(s)	1233, 1458, 1799
BstC8I	GCNNGC	8 cut(s)	169, 562, 646, 849, 1134, 1191, 1258, 1950
BstDEI	CTNAG	8 cut(s)	91, 752, 837, 971, 1261, 1871, 2042, 2063
BstDSI	CCRYGG	6 cut(s)	157, 236, 997, 1325, 1525, 1984
BstF5I	GGATG	7 cut(s)	547, 1160, 1255, 1452, 1912, 1980, 2059
BstH2I	RGCGCY	3 cut(s)	9, 2087, 2158
BstHHI	GCGC	7 cut(s)	8, 141, 250, 796, 2086, 2146, 2157
BstMAI	GTCTC	6 cut(s)	73, 211, 1550, 1854, 1874, 1928
BstMCI	CGRYCG	2 cut(s)	428, 1291
BstNI	CCWGG	2 cut(s)	1247, 1809
BstPAI	GACNNNNGTC	1 cut(s)	1866
BstSCI	CCNGG	6 cut(s)	385, 872, 1245, 1668, 1807, 1902
BstSLI	GKGCMC	1 cut(s)	1646
BstV1I	GCAGC	6 cut(s)	132, 237, 673, 1240, 1557, 1715
BstV2I	GAAGAC	1 cut(s)	1214
BstX2I	RGATCY	4 cut(s)	624, 748, 802, 1665
BstXI	CCANNNNNNTGG	2 cut(s)	1031, 1532
BstYI	RGATCY	4 cut(s)	624, 748, 802, 1665
BstZI	CGGCCG	1 cut(s)	425
Bsu15I	ATCGAT	1 cut(s)	771
BsuTUI	ATCGAT	1 cut(s)	771
BtgI	CCRYGG	6 cut(s)	157, 236, 997, 1325, 1525, 1984
BtsCI	GGATG	7 cut(s)	547, 1160, 1255, 1452, 1912, 1980, 2059
BtsIMutI	CAGTG	6 cut(s)	24, 273, 934, 1061, 1269, 1793
BtuMI	TCGCGA	3 cut(s)	171, 1115, 1287
BveI	ACCTGC	1 cut(s)	200
Cac8I	GCNNGC	8 cut(s)	169, 562, 646, 849, 1134, 1191, 1258, 1950
CciI	TCATGA	1 cut(s)	2007
CfoI	GCGC	7 cut(s)	8, 141, 250, 796, 2086, 2146, 2157
Cfr13I	GGNCC	5 cut(s)	241, 523, 559, 1020, 1414
Cfr42I	CCGCGG	1 cut(s)	160
ClaI	ATCGAT	1 cut(s)	771
CseI	GACGC	5 cut(s)	295, 388, 582, 842, 1195
Csp6I	GTAC	3 cut(s)	899, 1435, 2103
CspCI	CAANNNNNGTGG	2 cut(s)	778, 813
CviAII	CATG	6 cut(s)	998, 1049, 1411, 1526, 1985, 2008
CviQI	GTAC	3 cut(s)	899, 1435, 2103
DdeI	CTNAG	8 cut(s)	91, 752, 837, 971, 1261, 1871, 2042, 2063
DinI	GGCGCC	1 cut(s)	2156
DriI	GACNNNNNGTC	1 cut(s)	741
EaeI	YGGCCR	7 cut(s)	383, 425, 726, 786, 1322, 1522, 1889
EagI	CGGCCG	1 cut(s)	425
Eam1104I	CTCTTC	3 cut(s)	467, 671, 885
Eam1105I	GACNNNNNGTC	1 cut(s)	741
EarI	CTCTTC	3 cut(s)	467, 671, 885
EciI	GGCGGA	2 cut(s)	253, 383
Ecl136II	GAGCTC	1 cut(s)	977
EclXI	CGGCCG	1 cut(s)	425
Eco130I	CCWWGG	4 cut(s)	939, 997, 1525, 1984
Eco147I	AGGCCT	1 cut(s)	644
Eco24I	GRGCYC	1 cut(s)	979
Eco31I	GGTCTC	1 cut(s)	73
Eco47I	GGWCC	3 cut(s)	523, 1020, 1414
Eco52I	CGGCCG	1 cut(s)	425
Eco53kI	GAGCTC	1 cut(s)	977
Eco57I	CTGAAG	1 cut(s)	641
Eco88I	CYCGRG	1 cut(s)	125
EcoICRI	GAGCTC	1 cut(s)	977
EcoO109I	RGGNCCY	2 cut(s)	523, 1020
EcoRI	GAATTC	2 cut(s)	503, 1715
EcoRII	CCWGG	2 cut(s)	1245, 1807
EcoT14I	CCWWGG	4 cut(s)	939, 997, 1525, 1984
EcoT22I	ATGCAT	1 cut(s)	1961
EcoT38I	GRGCYC	1 cut(s)	979
EgeI	GGCGCC	1 cut(s)	2156
EheI	GGCGCC	1 cut(s)	2156
ErhI	CCWWGG	4 cut(s)	939, 997, 1525, 1984
Esp3I	CGTCTC	1 cut(s)	211
FaeI	CATG	6 cut(s)	1001, 1052, 1414, 1529, 1988, 2011
FaqI	GGGAC	7 cut(s)	402, 938, 948, 1006, 1343, 1493, 2002
FatI	CATG	6 cut(s)	997, 1048, 1410, 1525, 1984, 2007
FauI	CCCGC	5 cut(s)	86, 92, 289, 569, 840
FblI	GTMKAC	1 cut(s)	339
FokI	GGATG	7 cut(s)	534, 1167, 1262, 1459, 1919, 1967, 2066
FriOI	GRGCYC	1 cut(s)	979
FspBI	CTAG	1 cut(s)	902
GlaI	GCGC	7 cut(s)	7, 140, 249, 795, 2085, 2145, 2156
GsaI	CCCAGC	1 cut(s)	1027
GsuI	CTGGAG	3 cut(s)	1076, 1295, 1673
HaeII	RGCGCY	3 cut(s)	9, 2087, 2158
HapII	CCGG	8 cut(s)	35, 386, 533, 873, 1669, 1903, 1941, 1969
HgaI	GACGC	5 cut(s)	295, 388, 582, 842, 1195
HhaI	GCGC	7 cut(s)	8, 141, 250, 796, 2086, 2146, 2157
Hin1I	GRCGYC	2 cut(s)	593, 2155
Hin1II	CATG	6 cut(s)	1001, 1052, 1414, 1529, 1988, 2011
Hin6I	GCGC	7 cut(s)	6, 139, 248, 794, 2084, 2144, 2155
HinP1I	GCGC	7 cut(s)	6, 139, 248, 794, 2084, 2144, 2155
HindIII	AAGCTT	4 cut(s)	575, 653, 1130, 1973
HpaII	CCGG	8 cut(s)	35, 386, 533, 873, 1669, 1903, 1941, 1969
HphI	GGTGA	9 cut(s)	190, 316, 325, 562, 628, 1183, 1379, 1541, 1787
Hpy166II	GTNNAC	5 cut(s)	340, 600, 932, 1912, 2119
Hpy8I	GTNNAC	5 cut(s)	340, 600, 932, 1912, 2119
Hpy99I	CGWCG	7 cut(s)	311, 598, 710, 781, 784, 815, 818
HpyAV	CCTTC	4 cut(s)	322, 1168, 1670, 1686
HpyCH4III	ACNGT	8 cut(s)	337, 361, 818, 929, 1065, 1171, 1484, 1783
HpyCH4IV	ACGT	4 cut(s)	555, 776, 918, 1300
HpyCH4V	TGCA	8 cut(s)	1158, 1306, 1461, 1573, 1686, 1793, 1959, 2059
HpyF3I	CTNAG	8 cut(s)	91, 752, 837, 971, 1261, 1871, 2042, 2063
HpySE526I	ACGT	4 cut(s)	555, 776, 918, 1300
Hsp92I	GRCGYC	2 cut(s)	593, 2155
Hsp92II	CATG	6 cut(s)	1001, 1052, 1414, 1529, 1988, 2011
HspAI	GCGC	7 cut(s)	6, 139, 248, 794, 2084, 2144, 2155
KasI	GGCGCC	1 cut(s)	2154
KflI	GGGWCCC	1 cut(s)	1020
Kpn2I	TCCGGA	1 cut(s)	1968
KspI	CCGCGG	1 cut(s)	160
LguI	GCTCTTC	2 cut(s)	671, 885
LmnI	GCTCC	6 cut(s)	22, 86, 159, 443, 1276, 1807
Lsp1109I	GCAGC	6 cut(s)	132, 237, 673, 1240, 1557, 1715
LweI	GCATC	5 cut(s)	427, 1145, 1240, 1968, 2131
MaeI	CTAG	1 cut(s)	902
MaeII	ACGT	4 cut(s)	555, 776, 918, 1300
MaeIII	GTNAC	3 cut(s)	322, 1059, 1824
MbiI	CCGCTC	3 cut(s)	17, 81, 564
MboII	GAAGA	7 cut(s)	454, 658, 859, 902, 1219, 1834, 2150
MfeI	CAATTG	1 cut(s)	739
MflI	RGATCY	4 cut(s)	624, 748, 802, 1665
MhlI	GDGCHC	5 cut(s)	979, 1010, 1273, 1443, 1646
MlsI	TGGCCA	5 cut(s)	728, 788, 1324, 1524, 1891
MluCI	AATT	7 cut(s)	113, 503, 739, 756, 1164, 1281, 1715
MluNI	TGGCCA	5 cut(s)	728, 788, 1324, 1524, 1891
Mly113I	GGCGCC	1 cut(s)	2155
MlyI	GAGTC	7 cut(s)	384, 472, 1067, 1399, 1876, 1930, 2114
MmeI	TCCRAC	4 cut(s)	96, 234, 480, 1373
Mox20I	TGGCCA	5 cut(s)	728, 788, 1324, 1524, 1891
Mph1103I	ATGCAT	1 cut(s)	1961
MroI	TCCGGA	1 cut(s)	1968
MroXI	GAANNNNTTC	1 cut(s)	1976
MscI	TGGCCA	5 cut(s)	728, 788, 1324, 1524, 1891
MseI	TTAA	4 cut(s)	579, 981, 1071, 2048
MslI	CAYNNNNRTG	1 cut(s)	1530
Msp20I	TGGCCA	5 cut(s)	728, 788, 1324, 1524, 1891
MspA1I	CMGCKG	1 cut(s)	159
MspCI	CTTAAG	2 cut(s)	980, 2047
MspI	CCGG	8 cut(s)	35, 386, 533, 873, 1669, 1903, 1941, 1969
MspR9I	CCNGG	6 cut(s)	387, 874, 1247, 1670, 1809, 1904
MunI	CAATTG	1 cut(s)	739
Mva1269I	GAATGC	1 cut(s)	1961
MvaI	CCWGG	2 cut(s)	1247, 1809
NarI	GGCGCC	1 cut(s)	2155
NciI	CCSGG	4 cut(s)	387, 874, 1670, 1904
NcoI	CCATGG	3 cut(s)	997, 1525, 1984
NlaIII	CATG	6 cut(s)	1001, 1052, 1414, 1529, 1988, 2011
NlaIV	GGNNCC	7 cut(s)	242, 445, 804, 1021, 1022, 1278, 2156
NmeAIII	GCCGAG	2 cut(s)	989, 1726
NmuCI	GTSAC	3 cut(s)	322, 1059, 1824
NruI	TCGCGA	3 cut(s)	171, 1115, 1287
NsiI	ATGCAT	1 cut(s)	1961
PaeR7I	CTCGAG	1 cut(s)	125
PagI	TCATGA	1 cut(s)	2007
PceI	AGGCCT	1 cut(s)	644
PciSI	GCTCTTC	2 cut(s)	671, 885
PcsI	WCGNNNNNNNCGW	1 cut(s)	1297
PctI	GAATGC	1 cut(s)	1961
PdmI	GAANNNNTTC	1 cut(s)	1976
PfeI	GAWTC	3 cut(s)	43, 1294, 1660
PflMI	CCANNNNNTGG	2 cut(s)	381, 1502
Ple19I	CGATCG	1 cut(s)	1291
PleI	GAGTC	7 cut(s)	384, 472, 1066, 1398, 1875, 1929, 2114
PluTI	GGCGCC	1 cut(s)	2158
PpsI	GAGTC	7 cut(s)	384, 472, 1066, 1398, 1875, 1929, 2114
PpuMI	RGGWCCY	2 cut(s)	523, 1020
PshAI	GACNNNNGTC	1 cut(s)	1866
Psp124BI	GAGCTC	1 cut(s)	979
Psp5II	RGGWCCY	2 cut(s)	523, 1020
Psp6I	CCWGG	2 cut(s)	1245, 1807
PspFI	CCCAGC	1 cut(s)	1023
PspGI	CCWGG	2 cut(s)	1245, 1807
PspN4I	GGNNCC	7 cut(s)	242, 445, 804, 1021, 1022, 1278, 2156
PspPI	GGNCC	5 cut(s)	241, 523, 559, 1020, 1414
PspPPI	RGGWCCY	2 cut(s)	523, 1020
PsuI	RGATCY	4 cut(s)	624, 748, 802, 1665
PvuI	CGATCG	1 cut(s)	1291
RruI	TCGCGA	3 cut(s)	171, 1115, 1287
RsaI	GTAC	3 cut(s)	900, 1436, 2104
RsaNI	GTAC	3 cut(s)	899, 1435, 2103
RseI	CAYNNNNRTG	1 cut(s)	1530
SacI	GAGCTC	1 cut(s)	979
SacII	CCGCGG	1 cut(s)	160
SapI	GCTCTTC	2 cut(s)	671, 885
SaqAI	TTAA	4 cut(s)	579, 981, 1071, 2048
Sau96I	GGNCC	5 cut(s)	241, 523, 559, 1020, 1414
SchI	GAGTC	7 cut(s)	384, 472, 1067, 1399, 1876, 1930, 2114
ScrFI	CCNGG	6 cut(s)	387, 874, 1247, 1670, 1809, 1904
SduI	GDGCHC	5 cut(s)	979, 1010, 1273, 1443, 1646
SfaNI	GCATC	5 cut(s)	427, 1145, 1240, 1968, 2131
SfoI	GGCGCC	1 cut(s)	2156
Sfr274I	CTCGAG	1 cut(s)	125
Sfr303I	CCGCGG	1 cut(s)	160
SgrBI	CCGCGG	1 cut(s)	160
SinI	GGWCC	3 cut(s)	523, 1020, 1414
SlaI	CTCGAG	1 cut(s)	125
SmiMI	CAYNNNNRTG	1 cut(s)	1530
SmlI	CTYRAG	5 cut(s)	125, 980, 1864, 1896, 2047
SmoI	CTYRAG	5 cut(s)	125, 980, 1864, 1896, 2047
Sse9I	AATT	7 cut(s)	113, 503, 739, 756, 1164, 1281, 1715
SseBI	AGGCCT	1 cut(s)	644
SspDI	GGCGCC	1 cut(s)	2154
SspMI	CTAG	1 cut(s)	902
SstI	GAGCTC	1 cut(s)	979
StuI	AGGCCT	1 cut(s)	644
StyD4I	CCNGG	6 cut(s)	385, 872, 1245, 1668, 1807, 1902
StyI	CCWWGG	4 cut(s)	939, 997, 1525, 1984
TaaI	ACNGT	8 cut(s)	337, 361, 818, 929, 1065, 1171, 1484, 1783
TaiI	ACGT	4 cut(s)	558, 779, 921, 1303
TasI	AATT	7 cut(s)	113, 503, 739, 756, 1164, 1281, 1715
TatI	WGTACW	1 cut(s)	2102
TauI	GCSGC	9 cut(s)	11, 14, 17, 111, 162, 399, 430, 854, 1940
TfiI	GAWTC	3 cut(s)	43, 1294, 1660
Tru1I	TTAA	4 cut(s)	579, 981, 1071, 2048
Tru9I	TTAA	4 cut(s)	579, 981, 1071, 2048
TscAI	CASTG	6 cut(s)	31, 280, 934, 1068, 1269, 1800
TseFI	GTSAC	3 cut(s)	322, 1059, 1824
TseI	GCWGC	6 cut(s)	120, 250, 661, 1253, 1570, 1728
Tsp45I	GTSAC	3 cut(s)	322, 1059, 1824
TspDTI	ATGAA	5 cut(s)	1389, 1775, 1969, 1996, 2109
TspGWI	ACGGA	3 cut(s)	193, 310, 533
TspRI	CASTG	6 cut(s)	31, 280, 934, 1068, 1269, 1800
Van91I	CCANNNNNTGG	2 cut(s)	381, 1502
Vha464I	CTTAAG	2 cut(s)	980, 2047
VpaK11BI	GGWCC	3 cut(s)	523, 1020, 1414
XapI	RAATTY	3 cut(s)	113, 503, 1715
XcmI	CCANNNNNNNNNTGG	1 cut(s)	61
XhoI	CTCGAG	1 cut(s)	125
XmiI	GTMKAC	1 cut(s)	339
XmnI	GAANNNNTTC	1 cut(s)	1976
XspI	CTAG	1 cut(s)	902
Zsp2I	ATGCAT	1 cut(s)	1961

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.