Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0009306

Physical Location & Seq

Genomic Coordinates Reverse (-)

44003641 .. 44006001

Gene Structure 2361 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G027800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2175 bp

ATGAGCGCCGCCGCCGCCGCTCCGATCACTGACCTGCCGGAGGCGATTCTCGCCACCATCATCGGCCTGGTCTCCGACACCCGCTCCCGCAACTCGGTCGCCCTCGTCTGCCGCAAATTCCGCAGCCTCGAGAGAGCCACGCGCACCTCTCTCAAGCTCCGCGGCAACGCGCGCGACCTCCACCTGATCCCGACCTGCTTCACCTCCGTCTCCGACCTCGACCTCTCCCTCCTCTCGCCGTGGGGACACGCGCTGCTCTCCCCCTCCGCCTCCTCCACCGACCCCGCCCTCCTCGCCCAACGGCTCCGCGTCGCCTTCCCCTCCGTCACCTCCCTCACCGTCTACTCCCGATCCTCCTCCACCGTCCAGATTGTCGCCAATCTCTGGCCGGGACTCCGCCGCGTCAAGCTTGTCCGGTGGCATCTACGGCCGCAGTCGCCTCTCGGAGCCGACTTCGATCCTCTCTTCCAGCAATGCCAGACTCTGTCCGATTTGGACTTGTCGGAATTCTACTACTGGACCGAGGACCTCCCTCCGGTTCTGGAAGCCCATCCCAACGTGGCCCGCTCTCTCACCAAGCTCAATCTCCTGACGGCGTCGATTACCGAGGGTTTCAAAGCCATCGAGATCCGATCCATCACCGAGGCCTGCCCCAAGCTTCAGCAGCTCTTCGTCGCTTGTATTTTTGATCCCAGATACATAGGGATCGTCGGGGAGGAGGCTCTCTTGGCCATATCGACCAATTGTCCGGAGCTCAGAGTCGTCCATCTCATCGATACGTCGTCCTTGGCCAACGCGCGTGGGGATCCAAATGACGACGGCTTCACATCGGAGGACGCTCAGATTGGGCGGGCGGCTTTGATCGACTTCTTCTCCGGGCTTCCTTTGCTGGAAGAGCTGGTGCTAGATGTGTGCAAGAACGTGAGGGACAGTGGATTGGCCTTGGAGGTTCTTGCTTCCAAGTGTCCCAGACTGAGAGCTCTCAAGCTTGGCCAGTTCCATGGGCTGTGCTCGGCGGTTGGGTCCCAGCTCGACGGCATTGCTCTGTGTCATGGGCTGGAGTCACTGTCGATCAAGAACTCTGCGGATTTGACAGATATGGGATTGATCGAAATCGCGAGGGGGTGTTGTAAGCTTGCAAAGTTTGAGGTGTATGGATGCAAGAAAATTACAGTGAAGGGGTTGAGGACGCTGGCTTGTTTGTTGAGGAAGACTTTAGTTGATGTGAGCATATCTTGCTGTAAGAACCTGGATGCTGCCGGCTCAGTCTGTGCTCTGGAGCCAATTCGCGATCGGATTCAGCGTCTGCACATAGATTGTGTCTGGCCACGGGACTTTGATCTCAATCAAGTCAATGATTATGATGTTGGTGATGATGAAAGTGTTGTGATGAGTCGGAATGGTAATGATGACATGGACCTGAAATGGAGTGATGAGTACGAGCACAGGATCAGCAAGAAGTGCAAGTATGGATCAGATGGGGACTGTTCCTATATGCCAACCAATGGCTACGCGAATGGAAATGGCCATGGTAATGGAAATGGGTTTTGGAGTGATGAGACTTGGGAAAGGCTGCAGTACCTATCACTTTGGATTGAGGTGGGGGAGTTGCTGACATCATTGCCAGAGGTGGGTCTGGACGAGTGCCCCAATCTGGAGGAGATTCAGATCCGGGTGGAAGGCGATTGCAGGGGAAGGCACAAACCCACACAGCGAGAATTCGGGTTAAGCTGCCTATCCCGTTTTCCTCGGCTGTCAAAGATGAAGCTGGATTGTGGTGATACTGTGGGATATGCACTGACTGCTCCACCAGGACAGATGGACTTGTCACTTTGGGAGAGGTTCTTCCTCTCTGGGATTGGAGAATTGAGTCTCAGCGAAGTCGATTATTGGCCACCTCAAGACCGGGATGTGAACCAGAGGAGTCTCTGGCTTCCAGCTGCCGGATTGCTGGCAGAATGCATAACACTCCGGAAGCTTTTCATCCATGGGACTGCTCACGAACATTTCATGATGTTCCTTGTGAGAAACCCAAACCTCAACCTCAGCTTAAGGGATGTGCAACTGAGAGAGGATTACTATCCAGCGCCCGAAAATGAAATGAGTACAGAGATGAGGGTGGACTCGTGCTGTCGCTTTGAAGATGCGCTGAACAGGCGCACAATCCTTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006807 GO:0006810 GO:0006950 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009628 GO:0009653 GO:0009914 GO:0009926 GO:0009934 GO:0009987 GO:0010016 GO:0010029 GO:0010035 GO:0010187 GO:0010817 GO:0016567 GO:0019005 GO:0019538 GO:0022603 GO:0031461 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0036211 GO:0042221 GO:0042335 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048367 GO:0048509 GO:0048518 GO:0048519 GO:0048580 GO:0048581 GO:0048583 GO:0048584 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050896 GO:0051093 GO:0051179 GO:0051234 GO:0051239 GO:0051241 GO:0060918 GO:0065007 GO:0065008 GO:0070647 GO:0071704 GO:0080134 GO:1900140 GO:1901564 GO:1901700 GO:1902494 GO:1902584 GO:1990234 GO:2000026 GO:2000070

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

724

Amino Acids

80.51

Weight (kDa)

5.33

Isoelectric Point (pI)

43.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box_5	PF18511	11 - 49	5.4e-07	F-box

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009306)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42620
fragaria_vesca	FvH4_2g05661 FvH4_2g12921 FvH4_4g05521 FvH4_6g27480
malus_domestica	MD09G1236800.v1.1 MD17G1266700.v1.1
prunus_persica	Prupe.3G117700_v2.0.a1
pyrus_communis	pycom09g15540
rosa_chinensis	RchiOBHm_Chr2g0128401 RchiOBHm_Chr2g0128411 RchiOBHm_Chr2g0129761
rosa_laevigata	RLG00000019101
rosa_multiflora	Rmu_ssc0000459.1_g000008
rosa_roxburghii	Rroxscaffold_2G00114320
rosa_rugosa	Rorug02G0289700
rosa_samantha	Rh2AG340400 Rh2BG348700 Rh2BG348900 Rh2CG327800 Rh2DG367200
rosa_wichuraiana	Rw2G027800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	42, 203
AccB7I	CCANNNNNTGG	2 cut(s)	384, 1505
AccBSI	CCGCTC	3 cut(s)	20, 84, 567
AccI	GTMKAC	1 cut(s)	342
AccIII	TCCGGA	2 cut(s)	748, 1971
AcoI	YGGCCR	8 cut(s)	386, 428, 729, 789, 991, 1325, 1525, 1892
AcsI	RAATTY	3 cut(s)	116, 506, 1718
AcuI	CTGAAG	1 cut(s)	644
AcyI	GRCGYC	1 cut(s)	596
AfaI	GTAC	3 cut(s)	1439, 1580, 2107
AfiI	CCNNNNNNNGG	8 cut(s)	40, 94, 384, 535, 1505, 1631, 1654, 1943
AflII	CTTAAG	1 cut(s)	2050
AgsI	TTSAA	2 cut(s)	616, 2141
AhdI	GACNNNNNGTC	1 cut(s)	744
AjnI	CCWGG	3 cut(s)	66, 1248, 1810
AjuI	GAANNNNNNNTTGG	2 cut(s)	1531, 1563
Alw21I	GWGCWC	5 cut(s)	756, 982, 1013, 1276, 1446
Alw26I	GTCTC	5 cut(s)	76, 214, 1553, 1877, 1931
AlwNI	CAGNNNCTG	2 cut(s)	484, 1306
Ama87I	CYCGRG	1 cut(s)	128
Aor13HI	TCCGGA	2 cut(s)	748, 1971
ApeKI	GCWGC	7 cut(s)	123, 253, 664, 1256, 1573, 1731, 1940
ApoI	RAATTY	3 cut(s)	116, 506, 1718
Asp700I	GAANNNNTTC	1 cut(s)	1979
AspLEI	GCGC	9 cut(s)	8, 144, 172, 174, 253, 799, 2089, 2149, 2160
AspS9I	GGNCC	5 cut(s)	519, 526, 562, 1023, 1417
AsuC2I	CCSGG	4 cut(s)	390, 877, 1673, 1907
AsuHPI	GGTGA	7 cut(s)	193, 319, 328, 565, 631, 1382, 1790
AvaI	CYCGRG	1 cut(s)	128
AvaII	GGWCC	4 cut(s)	519, 526, 1023, 1417
BaeGI	GKGCMC	1 cut(s)	1649
BalI	TGGCCA	6 cut(s)	731, 791, 993, 1327, 1527, 1894
BamHI	GGATCC	1 cut(s)	805
BanII	GRGCYC	2 cut(s)	756, 982
BauI	CACGAG	1 cut(s)	2125
BbsI	GAAGAC	1 cut(s)	1217
Bbv12I	GWGCWC	5 cut(s)	756, 982, 1013, 1276, 1446
BbvCI	CCTCAGC	1 cut(s)	2045
BbvI	GCAGC	7 cut(s)	135, 240, 676, 1243, 1560, 1718, 1927
BccI	CCATC	7 cut(s)	65, 558, 629, 644, 774, 1472, 1813
BceAI	ACGGC	6 cut(s)	223, 317, 443, 609, 835, 1051
BcgI	CGANNNNNNTGC	4 cut(s)	79, 113, 1022, 1056
BciT130I	CCWGG	3 cut(s)	68, 1250, 1812
BcnI	CCSGG	4 cut(s)	390, 877, 1673, 1907
BcoDI	GTCTC	5 cut(s)	76, 214, 1553, 1877, 1931
BfaI	CTAG	1 cut(s)	905
BfmI	CTRYAG	1 cut(s)	1574
BfoI	RGCGCY	2 cut(s)	9, 2090
BfrI	CTTAAG	1 cut(s)	2050
BfuAI	ACCTGC	2 cut(s)	42, 203
Bme1390I	CCNGG	7 cut(s)	68, 390, 877, 1250, 1673, 1812, 1907
Bme18I	GGWCC	4 cut(s)	519, 526, 1023, 1417
BmeRI	GACNNNNNGTC	1 cut(s)	744
BmeT110I	CYCGRG	1 cut(s)	128
BmgT120I	GGNCC	5 cut(s)	519, 526, 562, 1023, 1417
BmiI	GGNNCC	6 cut(s)	305, 448, 807, 1024, 1025, 1281
BmrFI	CCNGG	7 cut(s)	68, 390, 877, 1250, 1673, 1812, 1907
BmsI	GCATC	4 cut(s)	430, 1148, 1243, 2134
BpiI	GAAGAC	1 cut(s)	1217
BpmI	CTGGAG	3 cut(s)	1079, 1298, 1676
Bpu10I	CCTNAGC	1 cut(s)	2045
BpuEI	CTTGAG	3 cut(s)	137, 968, 1884
BpuMI	CCSGG	4 cut(s)	390, 877, 1673, 1907
Bsa29I	ATCGAT	1 cut(s)	774
BsaBI	GATNNNNATC	4 cut(s)	1112, 1344, 1667, 2079
BsaHI	GRCGYC	1 cut(s)	596
BsaI	GGTCTC	1 cut(s)	76
BsaWI	WCCGGW	4 cut(s)	414, 535, 748, 1971
BsaXI	ACNNNNNCTCC	6 cut(s)	68, 98, 857, 887, 1052, 1082
Bsc4I	CCNNNNNNNGG	8 cut(s)	40, 94, 384, 535, 1505, 1631, 1654, 1943
Bse118I	RCCGGY	1 cut(s)	1259
Bse1I	ACTGG	2 cut(s)	521, 994
Bse3DI	GCAATG	3 cut(s)	479, 1038, 1619
Bse8I	GATNNNNATC	4 cut(s)	1112, 1344, 1667, 2079
BseAI	TCCGGA	2 cut(s)	748, 1971
BseBI	CCWGG	3 cut(s)	68, 1250, 1812
BseCI	ATCGAT	1 cut(s)	774
BseGI	GGATG	6 cut(s)	550, 1163, 1258, 1915, 1983, 2062
BseJI	GATNNNNATC	4 cut(s)	1112, 1344, 1667, 2079
BseLI	CCNNNNNNNGG	8 cut(s)	40, 94, 384, 535, 1505, 1631, 1654, 1943
BseMI	GCAATG	3 cut(s)	479, 1038, 1619
BseMII	CTCAG	7 cut(s)	769, 854, 965, 1278, 1888, 2057, 2059
BseNI	ACTGG	2 cut(s)	521, 994
BsePI	GCGCGC	1 cut(s)	170
BseRI	GAGGAG	7 cut(s)	221, 262, 281, 346, 731, 1673, 1936
BseSI	GKGCMC	1 cut(s)	1649
BseX3I	CGGCCG	1 cut(s)	428
BseXI	GCAGC	7 cut(s)	135, 240, 676, 1243, 1560, 1718, 1927
BseYI	CCCAGC	1 cut(s)	1026
BsgI	GTGCAG	1 cut(s)	1292
Bsh1285I	CGRYCG	3 cut(s)	99, 431, 1294
BshVI	ATCGAT	1 cut(s)	774
BsiEI	CGRYCG	3 cut(s)	99, 431, 1294
BsiHKAI	GWGCWC	5 cut(s)	756, 982, 1013, 1276, 1446
BsiHKCI	CYCGRG	1 cut(s)	128
BslFI	GGGAC	8 cut(s)	258, 405, 941, 951, 1009, 1346, 1496, 2005
BslI	CCNNNNNNNGG	8 cut(s)	40, 94, 384, 535, 1505, 1631, 1654, 1943
BsmAI	GTCTC	5 cut(s)	76, 214, 1553, 1877, 1931
BsmBI	CGTCTC	1 cut(s)	214
BsmFI	GGGAC	8 cut(s)	258, 405, 941, 951, 1009, 1346, 1496, 2005
BsmI	GAATGC	1 cut(s)	1964
Bso31I	GGTCTC	1 cut(s)	76
BsoBI	CYCGRG	1 cut(s)	128
Bsp1286I	GDGCHC	6 cut(s)	756, 982, 1013, 1276, 1446, 1649
Bsp13I	TCCGGA	2 cut(s)	748, 1971
Bsp19I	CCATGG	3 cut(s)	1000, 1528, 1987
Bsp68I	TCGCGA	2 cut(s)	1118, 1290
BspCNI	CTCAG	7 cut(s)	768, 853, 966, 1277, 1887, 2058, 2058
BspDI	ATCGAT	1 cut(s)	774
BspEI	TCCGGA	2 cut(s)	748, 1971
BspHI	TCATGA	1 cut(s)	2010
BspLI	GGNNCC	6 cut(s)	305, 448, 807, 1024, 1025, 1281
BspMAI	CTGCAG	1 cut(s)	1578
BspMI	ACCTGC	2 cut(s)	42, 203
BspQI	GCTCTTC	2 cut(s)	674, 888
BspTI	CTTAAG	1 cut(s)	2050
BspTNI	GGTCTC	1 cut(s)	76
BsrBI	CCGCTC	3 cut(s)	20, 84, 567
BsrDI	GCAATG	3 cut(s)	479, 1038, 1619
BsrFI	RCCGGY	1 cut(s)	1259
BsrI	ACTGG	2 cut(s)	521, 994
BssAI	RCCGGY	1 cut(s)	1259
BssHII	GCGCGC	1 cut(s)	170
BssNI	GRCGYC	1 cut(s)	596
BssSI	CACGAG	1 cut(s)	2125
BssT1I	CCWWGG	5 cut(s)	786, 942, 1000, 1528, 1987
Bst2BI	CACGAG	1 cut(s)	2125
Bst2UI	CCWGG	3 cut(s)	68, 1250, 1812
Bst4CI	ACNGT	7 cut(s)	340, 364, 932, 1068, 1174, 1487, 1786
Bst6I	CTCTTC	3 cut(s)	470, 674, 888
BstACI	GRCGYC	1 cut(s)	596
BstAFI	CTTAAG	1 cut(s)	2050
BstAPI	GCANNNNNTGC	3 cut(s)	1236, 1461, 1802
BstC8I	GCNNGC	8 cut(s)	172, 565, 649, 852, 1137, 1194, 1261, 1953
BstDEI	CTNAG	7 cut(s)	755, 840, 974, 1264, 1874, 2045, 2066
BstDSI	CCRYGG	6 cut(s)	160, 239, 1000, 1328, 1528, 1987
BstENI	CCTNNNNNAGG	1 cut(s)	38
BstF5I	GGATG	6 cut(s)	550, 1163, 1258, 1915, 1983, 2062
BstH2I	RGCGCY	2 cut(s)	9, 2090
BstHHI	GCGC	9 cut(s)	8, 144, 172, 174, 253, 799, 2089, 2149, 2160
BstMAI	GTCTC	5 cut(s)	76, 214, 1553, 1877, 1931
BstMCI	CGRYCG	3 cut(s)	99, 431, 1294
BstNI	CCWGG	3 cut(s)	68, 1250, 1812
BstSCI	CCNGG	7 cut(s)	66, 388, 875, 1248, 1671, 1810, 1905
BstSFI	CTRYAG	1 cut(s)	1574
BstSLI	GKGCMC	1 cut(s)	1649
BstV1I	GCAGC	7 cut(s)	135, 240, 676, 1243, 1560, 1718, 1927
BstV2I	GAAGAC	1 cut(s)	1217
BstX2I	RGATCY	3 cut(s)	627, 805, 1668
BstXI	CCANNNNNNTGG	2 cut(s)	1001, 1535
BstYI	RGATCY	3 cut(s)	627, 805, 1668
BstZI	CGGCCG	1 cut(s)	428
Bsu15I	ATCGAT	1 cut(s)	774
BsuTUI	ATCGAT	1 cut(s)	774
BtgI	CCRYGG	6 cut(s)	160, 239, 1000, 1328, 1528, 1987
BtsCI	GGATG	6 cut(s)	550, 1163, 1258, 1915, 1983, 2062
BtsIMutI	CAGTG	5 cut(s)	27, 937, 1064, 1179, 1796
BtuMI	TCGCGA	2 cut(s)	1118, 1290
BveI	ACCTGC	2 cut(s)	42, 203
Cac8I	GCNNGC	8 cut(s)	172, 565, 649, 852, 1137, 1194, 1261, 1953
CaiI	CAGNNNCTG	2 cut(s)	484, 1306
CciI	TCATGA	1 cut(s)	2010
CfoI	GCGC	9 cut(s)	8, 144, 172, 174, 253, 799, 2089, 2149, 2160
Cfr10I	RCCGGY	1 cut(s)	1259
Cfr13I	GGNCC	5 cut(s)	519, 526, 562, 1023, 1417
Cfr42I	CCGCGG	1 cut(s)	163
ClaI	ATCGAT	1 cut(s)	774
CseI	GACGC	6 cut(s)	298, 391, 585, 845, 1198, 1292
Csp6I	GTAC	3 cut(s)	1438, 1579, 2106
CspCI	CAANNNNNGTGG	2 cut(s)	781, 816
CviAII	CATG	6 cut(s)	1001, 1052, 1414, 1529, 1988, 2011
CviQI	GTAC	3 cut(s)	1438, 1579, 2106
DdeI	CTNAG	7 cut(s)	755, 840, 974, 1264, 1874, 2045, 2066
DriI	GACNNNNNGTC	1 cut(s)	744
EaeI	YGGCCR	8 cut(s)	386, 428, 729, 789, 991, 1325, 1525, 1892
EagI	CGGCCG	1 cut(s)	428
Eam1104I	CTCTTC	3 cut(s)	470, 674, 888
Eam1105I	GACNNNNNGTC	1 cut(s)	744
EarI	CTCTTC	3 cut(s)	470, 674, 888
EciI	GGCGGA	2 cut(s)	256, 386
Ecl136II	GAGCTC	2 cut(s)	754, 980
EclXI	CGGCCG	1 cut(s)	428
Eco130I	CCWWGG	5 cut(s)	786, 942, 1000, 1528, 1987
Eco147I	AGGCCT	1 cut(s)	647
Eco24I	GRGCYC	2 cut(s)	756, 982
Eco31I	GGTCTC	1 cut(s)	76
Eco47I	GGWCC	4 cut(s)	519, 526, 1023, 1417
Eco52I	CGGCCG	1 cut(s)	428
Eco53kI	GAGCTC	2 cut(s)	754, 980
Eco57I	CTGAAG	1 cut(s)	644
Eco88I	CYCGRG	1 cut(s)	128
EcoICRI	GAGCTC	2 cut(s)	754, 980
EcoNI	CCTNNNNNAGG	1 cut(s)	38
EcoO109I	RGGNCCY	2 cut(s)	526, 1023
EcoRI	GAATTC	2 cut(s)	506, 1718
EcoRII	CCWGG	3 cut(s)	66, 1248, 1810
EcoT14I	CCWWGG	5 cut(s)	786, 942, 1000, 1528, 1987
EcoT22I	ATGCAT	1 cut(s)	1964
EcoT38I	GRGCYC	2 cut(s)	756, 982
ErhI	CCWWGG	5 cut(s)	786, 942, 1000, 1528, 1987
Esp3I	CGTCTC	1 cut(s)	214
FaeI	CATG	6 cut(s)	1004, 1055, 1417, 1532, 1991, 2014
FaqI	GGGAC	8 cut(s)	258, 405, 941, 951, 1009, 1346, 1496, 2005
FatI	CATG	6 cut(s)	1000, 1051, 1413, 1528, 1987, 2010
FauI	CCCGC	5 cut(s)	89, 95, 292, 572, 843
FblI	GTMKAC	1 cut(s)	342
FokI	GGATG	6 cut(s)	537, 1170, 1265, 1922, 1970, 2069
FriOI	GRGCYC	2 cut(s)	756, 982
FspBI	CTAG	1 cut(s)	905
GlaI	GCGC	9 cut(s)	7, 143, 171, 173, 252, 798, 2088, 2148, 2159
GsaI	CCCAGC	1 cut(s)	1030
GsuI	CTGGAG	3 cut(s)	1079, 1298, 1676
HaeII	RGCGCY	2 cut(s)	9, 2090
HgaI	GACGC	6 cut(s)	298, 391, 585, 845, 1198, 1292
HhaI	GCGC	9 cut(s)	8, 144, 172, 174, 253, 799, 2089, 2149, 2160
Hin1I	GRCGYC	1 cut(s)	596
Hin1II	CATG	6 cut(s)	1004, 1055, 1417, 1532, 1991, 2014
Hin6I	GCGC	9 cut(s)	6, 142, 170, 172, 251, 797, 2087, 2147, 2158
HinP1I	GCGC	9 cut(s)	6, 142, 170, 172, 251, 797, 2087, 2147, 2158
HindIII	AAGCTT	5 cut(s)	407, 656, 986, 1133, 1976
HphI	GGTGA	7 cut(s)	193, 319, 328, 565, 631, 1382, 1790
Hpy166II	GTNNAC	3 cut(s)	343, 1915, 2122
Hpy8I	GTNNAC	3 cut(s)	343, 1915, 2122
Hpy99I	CGWCG	7 cut(s)	314, 601, 677, 713, 784, 821, 1037
HpyAV	CCTTC	4 cut(s)	325, 1171, 1673, 1689
HpyCH4III	ACNGT	7 cut(s)	340, 364, 932, 1068, 1174, 1487, 1786
HpyCH4IV	ACGT	3 cut(s)	558, 779, 921
HpyF3I	CTNAG	7 cut(s)	755, 840, 974, 1264, 1874, 2045, 2066
HpySE526I	ACGT	3 cut(s)	558, 779, 921
Hsp92I	GRCGYC	1 cut(s)	596
Hsp92II	CATG	6 cut(s)	1004, 1055, 1417, 1532, 1991, 2014
HspAI	GCGC	9 cut(s)	6, 142, 170, 172, 251, 797, 2087, 2147, 2158
KflI	GGGWCCC	1 cut(s)	1023
Kpn2I	TCCGGA	2 cut(s)	748, 1971
KroI	GCCGGC	1 cut(s)	1259
KroNI	GCCGGC	1 cut(s)	1261
KspI	CCGCGG	1 cut(s)	163
LguI	GCTCTTC	2 cut(s)	674, 888
LmnI	GCTCC	8 cut(s)	25, 89, 162, 309, 446, 751, 1279, 1810
Lsp1109I	GCAGC	7 cut(s)	135, 240, 676, 1243, 1560, 1718, 1927
LweI	GCATC	4 cut(s)	430, 1148, 1243, 2134
MaeI	CTAG	1 cut(s)	905
MaeII	ACGT	3 cut(s)	558, 779, 921
MaeIII	GTNAC	3 cut(s)	325, 1062, 1827
MauBI	CGCGCGCG	1 cut(s)	170
MbiI	CCGCTC	3 cut(s)	20, 84, 567
MboII	GAAGA	7 cut(s)	457, 661, 862, 905, 1222, 1837, 2153
MfeI	CAATTG	1 cut(s)	742
MflI	RGATCY	3 cut(s)	627, 805, 1668
MhlI	GDGCHC	6 cut(s)	756, 982, 1013, 1276, 1446, 1649
MlsI	TGGCCA	6 cut(s)	731, 791, 993, 1327, 1527, 1894
MluCI	AATT	7 cut(s)	116, 506, 742, 1167, 1284, 1718, 1865
MluNI	TGGCCA	6 cut(s)	731, 791, 993, 1327, 1527, 1894
MlyI	GAGTC	8 cut(s)	387, 475, 768, 1070, 1402, 1879, 1933, 2117
MmeI	TCCRAC	4 cut(s)	99, 237, 483, 1376
Mox20I	TGGCCA	6 cut(s)	731, 791, 993, 1327, 1527, 1894
Mph1103I	ATGCAT	1 cut(s)	1964
MroI	TCCGGA	2 cut(s)	748, 1971
MroNI	GCCGGC	1 cut(s)	1259
MroXI	GAANNNNTTC	1 cut(s)	1979
MscI	TGGCCA	6 cut(s)	731, 791, 993, 1327, 1527, 1894
MseI	TTAA	2 cut(s)	1727, 2051
MslI	CAYNNNNRTG	1 cut(s)	1533
Msp20I	TGGCCA	6 cut(s)	731, 791, 993, 1327, 1527, 1894
MspA1I	CMGCKG	2 cut(s)	162, 1940
MspCI	CTTAAG	1 cut(s)	2050
MspR9I	CCNGG	7 cut(s)	68, 390, 877, 1250, 1673, 1812, 1907
MunI	CAATTG	1 cut(s)	742
Mva1269I	GAATGC	1 cut(s)	1964
MvaI	CCWGG	3 cut(s)	68, 1250, 1812
NaeI	GCCGGC	1 cut(s)	1261
NciI	CCSGG	4 cut(s)	390, 877, 1673, 1907
NcoI	CCATGG	3 cut(s)	1000, 1528, 1987
NgoMIV	GCCGGC	1 cut(s)	1259
NlaIII	CATG	6 cut(s)	1004, 1055, 1417, 1532, 1991, 2014
NlaIV	GGNNCC	6 cut(s)	305, 448, 807, 1024, 1025, 1281
NmeAIII	GCCGAG	2 cut(s)	992, 1729
NmuCI	GTSAC	3 cut(s)	325, 1062, 1827
NruI	TCGCGA	2 cut(s)	1118, 1290
NsiI	ATGCAT	1 cut(s)	1964
PaeR7I	CTCGAG	1 cut(s)	128
PagI	TCATGA	1 cut(s)	2010
PauI	GCGCGC	1 cut(s)	170
PceI	AGGCCT	1 cut(s)	647
PciSI	GCTCTTC	2 cut(s)	674, 888
PcsI	WCGNNNNNNNCGW	1 cut(s)	1300
PctI	GAATGC	1 cut(s)	1964
PdiI	GCCGGC	1 cut(s)	1261
PdmI	GAANNNNTTC	1 cut(s)	1979
PfeI	GAWTC	3 cut(s)	46, 1297, 1663
PflFI	GACNNNGTC	2 cut(s)	484, 595
PflMI	CCANNNNNTGG	2 cut(s)	384, 1505
Ple19I	CGATCG	1 cut(s)	1294
PleI	GAGTC	8 cut(s)	387, 475, 767, 1069, 1401, 1878, 1932, 2117
PpsI	GAGTC	8 cut(s)	387, 475, 767, 1069, 1401, 1878, 1932, 2117
PpuMI	RGGWCCY	2 cut(s)	526, 1023
Psp124BI	GAGCTC	2 cut(s)	756, 982
Psp5II	RGGWCCY	2 cut(s)	526, 1023
Psp6I	CCWGG	3 cut(s)	66, 1248, 1810
PspFI	CCCAGC	1 cut(s)	1026
PspGI	CCWGG	3 cut(s)	66, 1248, 1810
PspN4I	GGNNCC	6 cut(s)	305, 448, 807, 1024, 1025, 1281
PspPI	GGNCC	5 cut(s)	519, 526, 562, 1023, 1417
PspPPI	RGGWCCY	2 cut(s)	526, 1023
PstI	CTGCAG	1 cut(s)	1578
PstNI	CAGNNNCTG	2 cut(s)	484, 1306
PsuI	RGATCY	3 cut(s)	627, 805, 1668
PsyI	GACNNNGTC	2 cut(s)	484, 595
PteI	GCGCGC	1 cut(s)	170
PvuI	CGATCG	1 cut(s)	1294
PvuII	CAGCTG	1 cut(s)	1940
RruI	TCGCGA	2 cut(s)	1118, 1290
RsaI	GTAC	3 cut(s)	1439, 1580, 2107
RsaNI	GTAC	3 cut(s)	1438, 1579, 2106
RseI	CAYNNNNRTG	1 cut(s)	1533
SacI	GAGCTC	2 cut(s)	756, 982
SacII	CCGCGG	1 cut(s)	163
SapI	GCTCTTC	2 cut(s)	674, 888
SaqAI	TTAA	2 cut(s)	1727, 2051
Sau96I	GGNCC	5 cut(s)	519, 526, 562, 1023, 1417
SchI	GAGTC	8 cut(s)	387, 475, 768, 1070, 1402, 1879, 1933, 2117
ScrFI	CCNGG	7 cut(s)	68, 390, 877, 1250, 1673, 1812, 1907
SduI	GDGCHC	6 cut(s)	756, 982, 1013, 1276, 1446, 1649
SfaNI	GCATC	4 cut(s)	430, 1148, 1243, 2134
SfcI	CTRYAG	1 cut(s)	1574
Sfr274I	CTCGAG	1 cut(s)	128
Sfr303I	CCGCGG	1 cut(s)	163
SgrBI	CCGCGG	1 cut(s)	163
SinI	GGWCC	4 cut(s)	519, 526, 1023, 1417
SlaI	CTCGAG	1 cut(s)	128
SmiMI	CAYNNNNRTG	1 cut(s)	1533
SmlI	CTYRAG	5 cut(s)	128, 152, 983, 1899, 2050
SmoI	CTYRAG	5 cut(s)	128, 152, 983, 1899, 2050
Sse9I	AATT	7 cut(s)	116, 506, 742, 1167, 1284, 1718, 1865
SseBI	AGGCCT	1 cut(s)	647
SspMI	CTAG	1 cut(s)	905
SstI	GAGCTC	2 cut(s)	756, 982
StuI	AGGCCT	1 cut(s)	647
StyD4I	CCNGG	7 cut(s)	66, 388, 875, 1248, 1671, 1810, 1905
StyI	CCWWGG	5 cut(s)	786, 942, 1000, 1528, 1987
TaaI	ACNGT	7 cut(s)	340, 364, 932, 1068, 1174, 1487, 1786
TaiI	ACGT	3 cut(s)	561, 782, 924
TaqII	GACCGA	2 cut(s)	85, 536
TasI	AATT	7 cut(s)	116, 506, 742, 1167, 1284, 1718, 1865
TatI	WGTACW	1 cut(s)	2105
TauI	GCSGC	9 cut(s)	11, 14, 17, 20, 114, 165, 402, 433, 857
TfiI	GAWTC	3 cut(s)	46, 1297, 1663
Tru1I	TTAA	2 cut(s)	1727, 2051
Tru9I	TTAA	2 cut(s)	1727, 2051
TscAI	CASTG	5 cut(s)	34, 937, 1071, 1179, 1803
TseFI	GTSAC	3 cut(s)	325, 1062, 1827
TseI	GCWGC	7 cut(s)	123, 253, 664, 1256, 1573, 1731, 1940
Tsp45I	GTSAC	3 cut(s)	325, 1062, 1827
TspDTI	ATGAA	5 cut(s)	1392, 1778, 1972, 1999, 2112
TspGWI	ACGGA	2 cut(s)	196, 313
TspRI	CASTG	5 cut(s)	34, 937, 1071, 1179, 1803
Tth111I	GACNNNGTC	2 cut(s)	484, 595
Van91I	CCANNNNNTGG	2 cut(s)	384, 1505
Vha464I	CTTAAG	1 cut(s)	2050
VpaK11BI	GGWCC	4 cut(s)	519, 526, 1023, 1417
XagI	CCTNNNNNAGG	1 cut(s)	38
XapI	RAATTY	3 cut(s)	116, 506, 1718
XcmI	CCANNNNNNNNNTGG	1 cut(s)	64
XhoI	CTCGAG	1 cut(s)	128
XmiI	GTMKAC	1 cut(s)	342
XmnI	GAANNNNTTC	1 cut(s)	1979
XspI	CTAG	1 cut(s)	905
Zsp2I	ATGCAT	1 cut(s)	1964

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.