FvH4_6g45710

2,3-bisphosphoglycerate-independent phosphoglycerate mutase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Reverse (-)
35014351 .. 35019126
4776 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g45710.t1

Sequence Viewer

Length: 1482 bp
ATGGGTCAAACACAGCAGCCAAAGAGAAGAGTGGCATTTTTGTTGATTGATGGTGTGGGGGATGTGTCAATACCAAAGTTGGGATTTAAGACTCCTCTTCAGGCGGCCAAAGTGCCGAATTTGGATGCCATAGCATCTGCTGGAGTTAATGGTCTAATGGACCCTGTTGAAGTTGGTCTGGGTTGTGGAAGTGACACAGCTCACCTTTCTCTAATGGGTTACAACCCTAGGGTATATTACCGGGGACGAGGTGCATTTGAGTCCATGGGAGCAGGATTGGCAATGTCACCAGGTGACATTGCATTTAAATCTAATTTTGCAACATTGGATGAAAAAACTGGAATAGTCATCAGTAGGAGGGCTGATAGACACTTTGAAGAAGAAGGGCCCATACTGTGTGCAGCACTCGATGGATTGAAGTTGCCATCTTTTCCCGAATATGAAGTCAGAGTCAGGTATGCAACAGAACATAGATGTGGAGTGGTTGTAAAAGGGCCAAATTTAAGTGGAAACATATCGGGAACAGACCCATTGAAGGATAACCGTTTACTTTTGCAAGCTGAACCTTTAGATGGTAGTGATGAGGCAAGGCATACAGCTAAAGTTGTTAACGAGTTATCCAAGGAAATATCAAAGATTCTCATTGCACATCCACTAAATGCAAAGCGAGCATCTGAAGGGAAGAACATAGCTAATGTGGTCCTTTTACGAGGTTGTGGTATCCGGATTGAGGTTTCTCCATTTGCAAAGAAACATGGGTTATGGCCTTGTATGGTAGCTCCAACAAAAATCATTGCAGGATTGGGCTTATCTCTTGGCATTGATATCCTGGAAGCTCCTGGAGCAACTGGAGACTACAGAACACTTCTAACTTCCAAAGCAACTGCAATAGCCAAGGCACTTTCAGCTCCTCTGCAGTCTTGCCCCAATGTATTTGTGCCAGGGGAAGATGAACACAAACCAGGGCGATCAGATGGCTACGATTTTGGGTTTCTCCACATAAAGGCTATAGATGATGCAGGTCATGATAAAGCAACCATTTTCAAAGTCAAAGGATTAGAAGCTGTAGATCGAGCTATAGGGCAGCTGGCCAGGCTCCTTTGGGAGACTGAATCAACTGGAAAATTTCAGTACTTCCTTTGTGTTACAGGAGACCACTCTACGCCAGTTGAATATGGAGACCACAGCTTTGAGCCAGTTCCATTCACAATATGTTCATTGAAAGATTTTGTGGGTGCTGTAGGTGTGGAAATGGTTTTGGGTGCTTCGCTTGATCCATTTCCTCTTCCAACTGTAAAAGAGGGTGAATATCCAACAGAGCCAGTGGAGATGGCACAGGAGCAGACCAAGCAGCCTCGAGCTTTCAACGGTGATTCAGTTTGTGAGTTTAATGAGATAGCGGCGGCAAGGGGATGTCTTGGACGTTTTCCTGGCGGTGAGATGATGGGAGTAATAAAGAATTTCCTGGAGCTAGAAGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

494

Amino Acids

52.87

Weight (kDa)

5.75

Isoelectric Point (pI)

33.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metalloenzyme PF01676 10 - 285 9.5e-10 Metalloenzyme superfamily
PhosphMutase PF10143 45 - 220 8.2e-53 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Metalloenzyme PF01676 325 - 406 2.3e-14 Metalloenzyme superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1010
AccIII TCCGGA 1 cut(s) 723
AciI CCGC 4 cut(s) 104, 1400, 1403, 1434
AclWI GGATC 1 cut(s) 1268
AcoI YGGCCR 2 cut(s) 105, 1089
AcsI RAATTY 4 cut(s) 118, 499, 1124, 1459
AcuI CTGAAG 2 cut(s) 83, 696
AdeI CACNNNGTG 1 cut(s) 293
AfaI GTAC 1 cut(s) 1133
AfiI CCNNNNNNNGG 5 cut(s) 80, 535, 572, 730, 1003
AgsI TTSAA 8 cut(s) 170, 377, 418, 535, 1045, 1172, 1222, 1366
AjnI CCWGG 8 cut(s) 289, 828, 838, 940, 961, 1091, 1429, 1464
Alw26I GTCTC 4 cut(s) 846, 1100, 1146, 1173
AlwI GGATC 1 cut(s) 1268
Ama87I CYCGRG 1 cut(s) 1356
Aor13HI TCCGGA 1 cut(s) 723
AoxI GGCC 5 cut(s) 105, 386, 494, 764, 1089
ApaI GGGCCC 1 cut(s) 390
ApeKI GCWGC 4 cut(s) 16, 401, 1084, 1351
ApoI RAATTY 4 cut(s) 118, 499, 1124, 1459
ArsI GACNNNNNNTTYG 4 cut(s) 429, 461, 1172, 1204
AspA2I CCTAGG 1 cut(s) 227
AspS9I GGNCC 5 cut(s) 160, 386, 387, 494, 700
AsuC2I CCSGG 1 cut(s) 242
AsuHPI GGTGA 6 cut(s) 194, 279, 305, 1316, 1382, 1448
AvaI CYCGRG 1 cut(s) 1356
AvaII GGWCC 2 cut(s) 160, 700
AvrII CCTAGG 1 cut(s) 227
BaeGI GKGCMC 1 cut(s) 390
BalI TGGCCA 1 cut(s) 1091
BanII GRGCYC 1 cut(s) 390
BarI GAAGNNNNNNTAC 2 cut(s) 375, 407
BbvI GCAGC 4 cut(s) 28, 413, 1096, 1363
BccI CCATC 7 cut(s) 44, 404, 433, 566, 968, 1324, 1438
BciT130I CCWGG 8 cut(s) 291, 830, 840, 942, 963, 1093, 1431, 1466
BciVI GTATCC 1 cut(s) 731
BcnI CCSGG 1 cut(s) 242
BcoDI GTCTC 4 cut(s) 846, 1100, 1146, 1173
BfaI CTAG 2 cut(s) 228, 1472
BfmI CTRYAG 6 cut(s) 856, 914, 1008, 1065, 1077, 1239
BfuAI ACCTGC 1 cut(s) 1010
BfuI GTATCC 1 cut(s) 731
BisI GCNGC 7 cut(s) 17, 105, 402, 1085, 1352, 1401, 1404
BlnI CCTAGG 1 cut(s) 227
BlsI GCNGC 7 cut(s) 18, 106, 403, 1086, 1353, 1402, 1405
BmcAI AGTACT 1 cut(s) 1133
Bme1390I CCNGG 9 cut(s) 242, 291, 830, 840, 942, 963, 1093, 1431, 1466
Bme18I GGWCC 2 cut(s) 160, 700
BmeT110I CYCGRG 1 cut(s) 1356
BmgT120I GGNCC 5 cut(s) 160, 386, 387, 494, 700
BmiI GGNNCC 3 cut(s) 162, 388, 1097
BmrFI CCNGG 9 cut(s) 242, 291, 830, 840, 942, 963, 1093, 1431, 1466
BmsI GCATC 4 cut(s) 115, 143, 680, 1006
BpmI CTGGAG 3 cut(s) 162, 861, 870
BpuMI CCSGG 1 cut(s) 242
BsaI GGTCTC 2 cut(s) 1146, 1173
BsaJI CCNNGG 7 cut(s) 227, 241, 264, 621, 894, 941, 962
BsaWI WCCGGW 1 cut(s) 723
BsaXI ACNNNNNCTCC 2 cut(s) 471, 501
Bsc4I CCNNNNNNNGG 5 cut(s) 80, 535, 572, 730, 1003
Bse1I ACTGG 6 cut(s) 343, 853, 1123, 1166, 1196, 1322
Bse3DI GCAATG 4 cut(s) 288, 297, 642, 792
BseAI TCCGGA 1 cut(s) 723
BseBI CCWGG 8 cut(s) 291, 830, 840, 942, 963, 1093, 1431, 1466
BseDI CCNNGG 7 cut(s) 227, 241, 264, 621, 894, 941, 962
BseGI GGATG 5 cut(s) 67, 130, 334, 649, 1418
BseLI CCNNNNNNNGG 5 cut(s) 80, 535, 572, 730, 1003
BseMI GCAATG 4 cut(s) 288, 297, 642, 792
BseNI ACTGG 6 cut(s) 343, 853, 1123, 1166, 1196, 1322
BseRI GAGGAG 2 cut(s) 84, 900
BseSI GKGCMC 1 cut(s) 390
BseXI GCAGC 4 cut(s) 28, 413, 1096, 1363
BsgI GTGCAG 1 cut(s) 420
BshFI GGCC 5 cut(s) 107, 388, 496, 766, 1091
BsiHKCI CYCGRG 1 cut(s) 1356
BsiSI CCGG 2 cut(s) 241, 724
BslFI GGGAC 1 cut(s) 258
BslI CCNNNNNNNGG 5 cut(s) 80, 535, 572, 730, 1003
BsmAI GTCTC 4 cut(s) 846, 1100, 1146, 1173
BsmFI GGGAC 1 cut(s) 258
BsnI GGCC 5 cut(s) 107, 388, 496, 766, 1091
Bso31I GGTCTC 2 cut(s) 1146, 1173
BsoBI CYCGRG 1 cut(s) 1356
Bsp120I GGGCCC 1 cut(s) 386
Bsp1286I GDGCHC 1 cut(s) 390
Bsp13I TCCGGA 1 cut(s) 723
Bsp143I GATC 3 cut(s) 968, 1069, 1273
Bsp19I CCATGG 1 cut(s) 264
BspACI CCGC 4 cut(s) 104, 1400, 1403, 1434
BspANI GGCC 5 cut(s) 107, 388, 496, 766, 1091
BspEI TCCGGA 1 cut(s) 723
BspHI TCATGA 1 cut(s) 1024
BspLI GGNNCC 3 cut(s) 162, 388, 1097
BspMAI CTGCAG 1 cut(s) 918
BspMI ACCTGC 1 cut(s) 1010
BspPI GGATC 1 cut(s) 1268
BspTNI GGTCTC 2 cut(s) 1146, 1173
BsrDI GCAATG 4 cut(s) 288, 297, 642, 792
BsrI ACTGG 6 cut(s) 343, 853, 1123, 1166, 1196, 1322
BssECI CCNNGG 7 cut(s) 227, 241, 264, 621, 894, 941, 962
BssMI GATC 3 cut(s) 968, 1069, 1273
BssT1I CCWWGG 4 cut(s) 227, 264, 621, 894
Bst2UI CCWGG 8 cut(s) 291, 830, 840, 942, 963, 1093, 1431, 1466
Bst4CI ACNGT 4 cut(s) 396, 545, 1294, 1370
Bst6I CTCTTC 3 cut(s) 22, 102, 1290
BstC8I GCNNGC 3 cut(s) 558, 669, 1089
BstDSI CCRYGG 1 cut(s) 264
BstF5I GGATG 5 cut(s) 67, 130, 334, 649, 1418
BstKTI GATC 3 cut(s) 971, 1072, 1276
BstMAI GTCTC 4 cut(s) 846, 1100, 1146, 1173
BstMBI GATC 3 cut(s) 968, 1069, 1273
BstMWI GCNNNNNNNGC 6 cut(s) 278, 668, 842, 905, 1093, 1348
BstNI CCWGG 8 cut(s) 291, 830, 840, 942, 963, 1093, 1431, 1466
BstSCI CCNGG 9 cut(s) 240, 289, 828, 838, 940, 961, 1091, 1429, 1464
BstSFI CTRYAG 6 cut(s) 856, 914, 1008, 1065, 1077, 1239
BstSLI GKGCMC 1 cut(s) 390
BstV1I GCAGC 4 cut(s) 28, 413, 1096, 1363
BsuI GTATCC 1 cut(s) 731
BsuRI GGCC 5 cut(s) 107, 388, 496, 766, 1091
BtgI CCRYGG 1 cut(s) 264
BtsCI GGATG 5 cut(s) 67, 130, 334, 649, 1418
BtsIMutI CAGTG 1 cut(s) 1329
BveI ACCTGC 1 cut(s) 1010
Cac8I GCNNGC 3 cut(s) 558, 669, 1089
CciI TCATGA 1 cut(s) 1024
Cfr13I GGNCC 5 cut(s) 160, 386, 387, 494, 700
CsiI ACCWGGT 1 cut(s) 289
Csp6I GTAC 1 cut(s) 1132
CviAII CATG 3 cut(s) 265, 755, 1025
CviQI GTAC 1 cut(s) 1132
DpnI GATC 3 cut(s) 970, 1071, 1275
DpnII GATC 3 cut(s) 968, 1069, 1273
DraI TTTAAA 1 cut(s) 307
DraIII CACNNNGTG 1 cut(s) 293
EaeI YGGCCR 2 cut(s) 105, 1089
Eam1104I CTCTTC 3 cut(s) 22, 102, 1290
EarI CTCTTC 3 cut(s) 22, 102, 1290
Eco130I CCWWGG 4 cut(s) 227, 264, 621, 894
Eco24I GRGCYC 1 cut(s) 390
Eco31I GGTCTC 2 cut(s) 1146, 1173
Eco32I GATATC 1 cut(s) 826
Eco47I GGWCC 2 cut(s) 160, 700
Eco57I CTGAAG 2 cut(s) 83, 696
Eco88I CYCGRG 1 cut(s) 1356
EcoO109I RGGNCCY 1 cut(s) 386
EcoRII CCWGG 8 cut(s) 289, 828, 838, 940, 961, 1091, 1429, 1464
EcoRV GATATC 1 cut(s) 826
EcoT14I CCWWGG 4 cut(s) 227, 264, 621, 894
EcoT38I GRGCYC 1 cut(s) 390
ErhI CCWWGG 4 cut(s) 227, 264, 621, 894
FaeI CATG 3 cut(s) 268, 758, 1028
FaqI GGGAC 1 cut(s) 258
FatI CATG 3 cut(s) 264, 754, 1024
Fnu4HI GCNGC 7 cut(s) 17, 105, 402, 1085, 1352, 1401, 1404
FokI GGATG 5 cut(s) 74, 137, 341, 636, 1425
FriOI GRGCYC 1 cut(s) 390
Fsp4HI GCNGC 7 cut(s) 17, 105, 402, 1085, 1352, 1401, 1404
FspBI CTAG 2 cut(s) 228, 1472
GluI GCNGC 7 cut(s) 17, 105, 402, 1085, 1352, 1401, 1404
GsuI CTGGAG 3 cut(s) 162, 861, 870
HaeIII GGCC 5 cut(s) 107, 388, 496, 766, 1091
HapII CCGG 2 cut(s) 241, 724
Hin1II CATG 3 cut(s) 268, 758, 1028
HincII GTYRAC 1 cut(s) 610
HindII GTYRAC 1 cut(s) 610
HindIII AAGCTT 1 cut(s) 1476
HinfI GANTC 6 cut(s) 91, 260, 450, 637, 1112, 1373
HpaI GTTAAC 1 cut(s) 610
HpaII CCGG 2 cut(s) 241, 724
HphI GGTGA 6 cut(s) 194, 279, 305, 1316, 1382, 1448
Hpy166II GTNNAC 2 cut(s) 548, 610
Hpy188I TCNGA 3 cut(s) 449, 676, 973
Hpy188III TCNNGA 4 cut(s) 434, 519, 724, 1025
Hpy8I GTNNAC 2 cut(s) 548, 610
HpyAV CCTTC 3 cut(s) 377, 529, 671
HpyCH4III ACNGT 4 cut(s) 396, 545, 1294, 1370
HpyCH4IV ACGT 1 cut(s) 1423
HpyF10VI GCNNNNNNNGC 6 cut(s) 278, 668, 842, 905, 1093, 1348
HpySE526I ACGT 1 cut(s) 1423
Hsp92II CATG 3 cut(s) 268, 758, 1028
Kpn2I TCCGGA 1 cut(s) 723
KspAI GTTAAC 1 cut(s) 610
Kzo9I GATC 3 cut(s) 968, 1069, 1273
LmnI GCTCC 8 cut(s) 269, 784, 841, 842, 913, 1101, 1339, 1468
Lsp1109I GCAGC 4 cut(s) 28, 413, 1096, 1363
LweI GCATC 4 cut(s) 115, 143, 680, 1006
MabI ACCWGGT 1 cut(s) 289
MaeI CTAG 2 cut(s) 228, 1472
MaeII ACGT 1 cut(s) 1423
MaeIII GTNAC 5 cut(s) 191, 218, 285, 293, 1144
MalI GATC 3 cut(s) 970, 1071, 1275
MboI GATC 3 cut(s) 968, 1069, 1273
MboII GAAGA 7 cut(s) 39, 89, 389, 392, 694, 959, 1277
MhlI GDGCHC 1 cut(s) 390
MlsI TGGCCA 1 cut(s) 1091
MluCI AATT 5 cut(s) 118, 313, 499, 1124, 1459
MluNI TGGCCA 1 cut(s) 1091
MlyI GAGTC 3 cut(s) 85, 269, 459
MmeI TCCRAC 3 cut(s) 806, 1313, 1337
Mox20I TGGCCA 1 cut(s) 1091
MroI TCCGGA 1 cut(s) 723
MscI TGGCCA 1 cut(s) 1091
MseI TTAA 6 cut(s) 87, 147, 306, 503, 609, 1389
MslI CAYNNNNRTG 1 cut(s) 474
Msp20I TGGCCA 1 cut(s) 1091
MspA1I CMGCKG 1 cut(s) 1087
MspI CCGG 2 cut(s) 241, 724
MspR9I CCNGG 9 cut(s) 242, 291, 830, 840, 942, 963, 1093, 1431, 1466
MvaI CCWGG 8 cut(s) 291, 830, 840, 942, 963, 1093, 1431, 1466
MwoI GCNNNNNNNGC 6 cut(s) 278, 668, 842, 905, 1093, 1348
NciI CCSGG 1 cut(s) 242
NcoI CCATGG 1 cut(s) 264
NdeII GATC 3 cut(s) 968, 1069, 1273
NlaIII CATG 3 cut(s) 268, 758, 1028
NlaIV GGNNCC 3 cut(s) 162, 388, 1097
NmuCI GTSAC 3 cut(s) 191, 285, 293
PaeR7I CTCGAG 1 cut(s) 1356
PagI TCATGA 1 cut(s) 1024
PfeI GAWTC 3 cut(s) 637, 1112, 1373
PfoI TCCNGGA 3 cut(s) 828, 838, 1464
PkrI GCNGC 7 cut(s) 18, 106, 403, 1086, 1353, 1402, 1405
PleI GAGTC 3 cut(s) 85, 268, 458
PpsI GAGTC 3 cut(s) 85, 268, 458
Psp6I CCWGG 8 cut(s) 289, 828, 838, 940, 961, 1091, 1429, 1464
PspGI CCWGG 8 cut(s) 289, 828, 838, 940, 961, 1091, 1429, 1464
PspN4I GGNNCC 3 cut(s) 162, 388, 1097
PspOMI GGGCCC 1 cut(s) 386
PspPI GGNCC 5 cut(s) 160, 386, 387, 494, 700
PspXI VCTCGAGB 1 cut(s) 1356
PstI CTGCAG 1 cut(s) 918
PvuII CAGCTG 1 cut(s) 1087
RsaI GTAC 1 cut(s) 1133
RsaNI GTAC 1 cut(s) 1132
RseI CAYNNNNRTG 1 cut(s) 474
SaqAI TTAA 6 cut(s) 87, 147, 306, 503, 609, 1389
SatI GCNGC 7 cut(s) 17, 105, 402, 1085, 1352, 1401, 1404
Sau3AI GATC 3 cut(s) 968, 1069, 1273
Sau96I GGNCC 5 cut(s) 160, 386, 387, 494, 700
ScaI AGTACT 1 cut(s) 1133
SchI GAGTC 3 cut(s) 85, 269, 459
ScrFI CCNGG 9 cut(s) 242, 291, 830, 840, 942, 963, 1093, 1431, 1466
SduI GDGCHC 1 cut(s) 390
SexAI ACCWGGT 1 cut(s) 289
SfaNI GCATC 4 cut(s) 115, 143, 680, 1006
SfcI CTRYAG 6 cut(s) 856, 914, 1008, 1065, 1077, 1239
Sfr274I CTCGAG 1 cut(s) 1356
SinI GGWCC 2 cut(s) 160, 700
SlaI CTCGAG 1 cut(s) 1356
SmiI ATTTAAAT 1 cut(s) 307
SmiMI CAYNNNNRTG 1 cut(s) 474
SmlI CTYRAG 1 cut(s) 1356
SmoI CTYRAG 1 cut(s) 1356
Sse9I AATT 5 cut(s) 118, 313, 499, 1124, 1459
SsiI CCGC 4 cut(s) 104, 1400, 1403, 1434
SspMI CTAG 2 cut(s) 228, 1472
StyD4I CCNGG 9 cut(s) 240, 289, 828, 838, 940, 961, 1091, 1429, 1464
StyI CCWWGG 4 cut(s) 227, 264, 621, 894
SwaI ATTTAAAT 1 cut(s) 307
TaaI ACNGT 4 cut(s) 396, 545, 1294, 1370
TaiI ACGT 1 cut(s) 1426
TaqI TCGA 3 cut(s) 408, 1072, 1357
TasI AATT 5 cut(s) 118, 313, 499, 1124, 1459
TatI WGTACW 1 cut(s) 1131
TauI GCSGC 3 cut(s) 107, 1403, 1406
TfiI GAWTC 3 cut(s) 637, 1112, 1373
Tru1I TTAA 6 cut(s) 87, 147, 306, 503, 609, 1389
Tru9I TTAA 6 cut(s) 87, 147, 306, 503, 609, 1389
TscAI CASTG 1 cut(s) 1329
TseFI GTSAC 3 cut(s) 191, 285, 293
TseI GCWGC 4 cut(s) 16, 401, 1084, 1351
Tsp45I GTSAC 3 cut(s) 191, 285, 293
TspDTI ATGAA 4 cut(s) 345, 456, 966, 1206
TspRI CASTG 1 cut(s) 1329
VpaK11BI GGWCC 2 cut(s) 160, 700
XapI RAATTY 4 cut(s) 118, 499, 1124, 1459
XhoI CTCGAG 1 cut(s) 1356
XmaJI CCTAGG 1 cut(s) 227
XspI CTAG 2 cut(s) 228, 1472
ZrmI AGTACT 1 cut(s) 1133
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.