MD17G1071600.v1.1

2,3-bisphosphoglycerate-independent phosphoglycerate mutase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Forward (+)
5768198 .. 5772119
3922 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1071600.v1.1.491

Sequence Viewer

Length: 1485 bp
ATGGGTCATTCTCAGCAGCCAAAAAGAAGAGTGGCATTTTTATTGATTGATGGTGTGGGAGACGTGTCAATACCAAGGTTTGGGTTTAAGACTCCTCTTCAGGCAGCCAAAGTACCCAATTTGGATGCCATTGCCTCTGCTGGAGTTAATGGTCTGATGGACCCTGTTGAAGTTGGTTTGGGTTGTGGAAGCGACACAGCTCACCTTTCTCTATTGGGTTACGACCCTAGAGTATATTACCGTGGCCGAGGCGCATTTGAGTCCATGGGTGCTGGTTTGGCAATGTCGCCTGGTGATATTGCATTTAAGTCTAATTTTGCAACCTTGGATGAAAAAACTGGAATAGTCATCAGTAGGAGGGCTGACAGACACTTTGAGGAAGAAGGGCCCGTACTGTGTGCAGCACTTGATGGAATGAAGCTGCCATCTTATCCCGAATATGAAGTCAGAGTCAGGTATGCAACAGAACATAGATGCGGAGTGGTTGTAAAAGGACCAAAGCTAAGTGGAAATATATCAGGAACAGATCCATTGAAGGACAACCGTTTACTTTTGCAAGCTGAAGCTCTAGACGGCACTGATGAGGCAAGGCACACAGCTAAAGTTGTTAACGAGTTATCCAAGGAAATATCACGTATTCTTGTTGCTCATCCGCTGAATGCAAAGCGGGCTGCTGAAGGGAAGAACATAGCTAATCTTGTCCTTTTACGAGGTTGTGGTATTTGGATTGAGGTTCCTCCCTTTGAGAAAAAACACGGGTTACGACCTTGCATGGTAGCTCCAACAAAAATCATTGCTGGACTGGGCTTATCTCTTGGCATTGATATCCTAGAAGCTCCTGGAGCAACCGGAGACTACCGAACACTTCTAACCTCCAAAGCAACTGCAATAGCTAAGGCACTCTCAGCTCCTCTGCAGTCTTGCTCCAATGTGTTTGTACCAGGGGAAGATGAGCACAAACCAGGCCAACCAGATGGCTACGATTTTGGGTTCCTTCACGTTAAGGCTATTGATGATGCGGGTCACGACAAGGCAACCCTCTTCAAAGTGAAAGCAATGGAAGCCGTAGATCGAGCTATAGGGCAGCTGGCCAGGCTTCTTTGGGAGGCCGAATCAACTGGAAATTTTGAGTACTTTCTTTGCATCACTGGAGACCACTCTACCCCAGTTGAATATGGAGACCACAGCTTTGAGCCGGTTCCATTCACAATATGTTCGTTGAAAGATTTTGTGGGTGTCATAGGTGCAGAAACCATTTTGGGAAGCTCTCTTGATCCATTTCCTCTTCCAACTGTAAAAGATGGTGAACAACTTACCGAAGATGTGAAGATGGAACAAGGGGAGGGAATCAAACAGCCTCAAGCTTACAGTGGCGATTCGGTTTTTGAGTTTAACGAGATAGCTGCAGCGAGGGGATGTCTTGGGCGTTTCCCGGGTGGAGAGATGATGGGTGTAATAAAGAAGTATCTTGAGCTAAGTGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

495

Amino Acids

53.02

Weight (kDa)

5.56

Isoelectric Point (pI)

33.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metalloenzyme PF01676 10 - 302 1e-10 Metalloenzyme superfamily
PhosphMutase PF10143 45 - 220 5.9e-53 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Metalloenzyme PF01676 326 - 406 1.8e-14 Metalloenzyme superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 80
AciI CCGC 4 cut(s) 477, 653, 667, 1019
AclWI GGATC 2 cut(s) 521, 1268
AcoI YGGCCR 2 cut(s) 244, 1089
AcsI RAATTY 1 cut(s) 1123
AcuI CTGAAG 3 cut(s) 83, 582, 696
AfaI GTAC 4 cut(s) 114, 393, 939, 1133
AfiI CCNNNNNNNGG 1 cut(s) 80
AflIII ACRYGT 1 cut(s) 63
AgsI TTSAA 5 cut(s) 170, 535, 1045, 1172, 1222
AjiI CACGTC 1 cut(s) 64
AjnI CCWGG 5 cut(s) 289, 838, 940, 961, 1091
Alw21I GWGCWC 1 cut(s) 957
Alw26I GTCTC 4 cut(s) 54, 846, 1146, 1173
AlwI GGATC 2 cut(s) 521, 1268
Ama87I CYCGRG 1 cut(s) 1432
AoxI GGCC 5 cut(s) 244, 386, 964, 1089, 1107
ApaI GGGCCC 1 cut(s) 390
ApeKI GCWGC 8 cut(s) 16, 104, 401, 421, 671, 1084, 1403, 1406
ApoI RAATTY 1 cut(s) 1123
ArsI GACNNNNNNTTYG 6 cut(s) 356, 388, 429, 461, 1172, 1204
AspLEI GCGC 1 cut(s) 254
AspS9I GGNCC 4 cut(s) 160, 386, 387, 494
AsuC2I CCSGG 2 cut(s) 1433, 1434
AsuHPI GGTGA 3 cut(s) 194, 305, 1316
AvaI CYCGRG 1 cut(s) 1432
AvaII GGWCC 2 cut(s) 160, 494
BaeGI GKGCMC 1 cut(s) 390
BalI TGGCCA 1 cut(s) 1091
BanII GRGCYC 1 cut(s) 390
BarI GAAGNNNNNNTAC 2 cut(s) 375, 407
Bbv12I GWGCWC 1 cut(s) 957
BbvI GCAGC 8 cut(s) 28, 116, 408, 413, 658, 1096, 1390, 1418
BccI CCATC 8 cut(s) 44, 151, 404, 433, 968, 1295, 1324, 1441
BceAI ACGGC 2 cut(s) 589, 1049
BcgI CGANNNNNNTGC 2 cut(s) 1385, 1419
BciT130I CCWGG 5 cut(s) 291, 840, 942, 963, 1093
BcnI CCSGG 2 cut(s) 1433, 1434
BcoDI GTCTC 4 cut(s) 54, 846, 1146, 1173
BfaI CTAG 3 cut(s) 228, 569, 830
BfmI CTRYAG 3 cut(s) 914, 1077, 1404
BisI GCNGC 8 cut(s) 17, 105, 402, 422, 672, 1085, 1404, 1407
BlsI GCNGC 8 cut(s) 18, 106, 403, 423, 673, 1086, 1405, 1408
BmcAI AGTACT 1 cut(s) 1133
Bme1390I CCNGG 7 cut(s) 291, 840, 942, 963, 1093, 1433, 1434
Bme18I GGWCC 2 cut(s) 160, 494
BmeT110I CYCGRG 1 cut(s) 1432
BmgBI CACGTC 1 cut(s) 64
BmgT120I GGNCC 4 cut(s) 160, 386, 387, 494
BmiI GGNNCC 5 cut(s) 162, 388, 735, 992, 1200
BmrFI CCNGG 7 cut(s) 291, 840, 942, 963, 1093, 1433, 1434
BmrI ACTGGG 2 cut(s) 812, 1160
BmsI GCATC 4 cut(s) 115, 464, 1006, 1152
BmuI ACTGGG 2 cut(s) 812, 1160
BpmI CTGGAG 3 cut(s) 162, 861, 1170
Bpu10I CCTNAGC 1 cut(s) 894
BpuEI CTTGAG 1 cut(s) 1344
BpuMI CCSGG 2 cut(s) 1433, 1434
BsaAI YACGTR 1 cut(s) 635
BsaI GGTCTC 2 cut(s) 1146, 1173
BsaJI CCNNGG 8 cut(s) 74, 241, 247, 264, 324, 621, 941, 1432
BsaWI WCCGGW 1 cut(s) 848
BsaXI ACNNNNNCTCC 2 cut(s) 471, 501
Bsc4I CCNNNNNNNGG 1 cut(s) 80
Bse118I RCCGGY 1 cut(s) 1195
Bse1I ACTGG 5 cut(s) 343, 807, 1123, 1153, 1166
Bse3DI GCAATG 4 cut(s) 129, 288, 792, 1062
BseBI CCWGG 5 cut(s) 291, 840, 942, 963, 1093
BseDI CCNNGG 8 cut(s) 74, 241, 247, 264, 324, 621, 941, 1432
BseGI GGATG 4 cut(s) 130, 334, 649, 1421
BseLI CCNNNNNNNGG 1 cut(s) 80
BseMI GCAATG 4 cut(s) 129, 288, 792, 1062
BseMII CTCAG 2 cut(s) 26, 918
BseNI ACTGG 5 cut(s) 343, 807, 1123, 1153, 1166
BseRI GAGGAG 2 cut(s) 84, 900
BseSI GKGCMC 1 cut(s) 390
BseXI GCAGC 8 cut(s) 28, 116, 408, 413, 658, 1096, 1390, 1418
BsgI GTGCAG 2 cut(s) 420, 1266
BshFI GGCC 5 cut(s) 246, 388, 966, 1091, 1109
BsiHKAI GWGCWC 1 cut(s) 957
BsiHKCI CYCGRG 1 cut(s) 1432
BsiSI CCGG 3 cut(s) 849, 1196, 1433
BslI CCNNNNNNNGG 1 cut(s) 80
BsmAI GTCTC 4 cut(s) 54, 846, 1146, 1173
BsmBI CGTCTC 1 cut(s) 54
BsmI GAATGC 1 cut(s) 664
BsnI GGCC 5 cut(s) 246, 388, 966, 1091, 1109
Bso31I GGTCTC 2 cut(s) 1146, 1173
BsoBI CYCGRG 1 cut(s) 1432
Bsp120I GGGCCC 1 cut(s) 386
Bsp1286I GDGCHC 2 cut(s) 390, 957
Bsp143I GATC 3 cut(s) 526, 1069, 1273
Bsp19I CCATGG 1 cut(s) 264
BspACI CCGC 4 cut(s) 477, 653, 667, 1019
BspANI GGCC 5 cut(s) 246, 388, 966, 1091, 1109
BspCNI CTCAG 2 cut(s) 25, 917
BspLI GGNNCC 5 cut(s) 162, 388, 735, 992, 1200
BspMAI CTGCAG 2 cut(s) 918, 1408
BspPI GGATC 2 cut(s) 521, 1268
BspTNI GGTCTC 2 cut(s) 1146, 1173
BsrDI GCAATG 4 cut(s) 129, 288, 792, 1062
BsrFI RCCGGY 1 cut(s) 1195
BsrI ACTGG 5 cut(s) 343, 807, 1123, 1153, 1166
BssAI RCCGGY 1 cut(s) 1195
BssECI CCNNGG 8 cut(s) 74, 241, 247, 264, 324, 621, 941, 1432
BssMI GATC 3 cut(s) 526, 1069, 1273
BssT1I CCWWGG 4 cut(s) 74, 264, 324, 621
Bst2UI CCWGG 5 cut(s) 291, 840, 942, 963, 1093
Bst4CI ACNGT 5 cut(s) 242, 396, 545, 1294, 1370
Bst6I CTCTTC 4 cut(s) 22, 102, 1046, 1290
BstBAI YACGTR 1 cut(s) 635
BstC8I GCNNGC 3 cut(s) 558, 669, 1089
BstDEI CTNAG 5 cut(s) 12, 503, 894, 904, 1475
BstDSI CCRYGG 2 cut(s) 241, 264
BstF5I GGATG 4 cut(s) 130, 334, 649, 1421
BstHHI GCGC 1 cut(s) 254
BstKTI GATC 3 cut(s) 529, 1072, 1276
BstMAI GTCTC 4 cut(s) 54, 846, 1146, 1173
BstMBI GATC 3 cut(s) 526, 1069, 1273
BstMWI GCNNNNNNNGC 6 cut(s) 278, 668, 842, 905, 1061, 1093
BstNI CCWGG 5 cut(s) 291, 840, 942, 963, 1093
BstSCI CCNGG 7 cut(s) 289, 838, 940, 961, 1091, 1431, 1432
BstSFI CTRYAG 3 cut(s) 914, 1077, 1404
BstSLI GKGCMC 1 cut(s) 390
BstV1I GCAGC 8 cut(s) 28, 116, 408, 413, 658, 1096, 1390, 1418
BstX2I RGATCY 1 cut(s) 526
BstXI CCANNNNNNTGG 1 cut(s) 974
BstYI RGATCY 1 cut(s) 526
BsuRI GGCC 5 cut(s) 246, 388, 966, 1091, 1109
BtgI CCRYGG 2 cut(s) 241, 264
BtrI CACGTC 1 cut(s) 64
BtsCI GGATG 4 cut(s) 130, 334, 649, 1421
BtsIMutI CAGTG 3 cut(s) 576, 1146, 1375
Cac8I GCNNGC 3 cut(s) 558, 669, 1089
CfoI GCGC 1 cut(s) 254
Cfr10I RCCGGY 1 cut(s) 1195
Cfr13I GGNCC 4 cut(s) 160, 386, 387, 494
Cfr9I CCCGGG 1 cut(s) 1432
Csp6I GTAC 4 cut(s) 113, 392, 938, 1132
CviAII CATG 3 cut(s) 265, 772, 1482
CviQI GTAC 4 cut(s) 113, 392, 938, 1132
DdeI CTNAG 5 cut(s) 12, 503, 894, 904, 1475
DpnI GATC 3 cut(s) 528, 1071, 1275
DpnII GATC 3 cut(s) 526, 1069, 1273
EaeI YGGCCR 2 cut(s) 244, 1089
Eam1104I CTCTTC 4 cut(s) 22, 102, 1046, 1290
EarI CTCTTC 4 cut(s) 22, 102, 1046, 1290
Eco130I CCWWGG 4 cut(s) 74, 264, 324, 621
Eco24I GRGCYC 1 cut(s) 390
Eco31I GGTCTC 2 cut(s) 1146, 1173
Eco32I GATATC 1 cut(s) 826
Eco47I GGWCC 2 cut(s) 160, 494
Eco57I CTGAAG 3 cut(s) 83, 582, 696
Eco88I CYCGRG 1 cut(s) 1432
EcoO109I RGGNCCY 1 cut(s) 386
EcoRII CCWGG 5 cut(s) 289, 838, 940, 961, 1091
EcoRV GATATC 1 cut(s) 826
EcoT14I CCWWGG 4 cut(s) 74, 264, 324, 621
EcoT38I GRGCYC 1 cut(s) 390
ErhI CCWWGG 4 cut(s) 74, 264, 324, 621
Esp3I CGTCTC 1 cut(s) 54
FaeI CATG 3 cut(s) 268, 775, 1485
FatI CATG 3 cut(s) 264, 771, 1481
FauI CCCGC 2 cut(s) 660, 1012
Fnu4HI GCNGC 8 cut(s) 17, 105, 402, 422, 672, 1085, 1404, 1407
FokI GGATG 4 cut(s) 137, 341, 636, 1428
FriOI GRGCYC 1 cut(s) 390
Fsp4HI GCNGC 8 cut(s) 17, 105, 402, 422, 672, 1085, 1404, 1407
FspBI CTAG 3 cut(s) 228, 569, 830
GlaI GCGC 1 cut(s) 253
GluI GCNGC 8 cut(s) 17, 105, 402, 422, 672, 1085, 1404, 1407
GsuI CTGGAG 3 cut(s) 162, 861, 1170
HaeIII GGCC 5 cut(s) 246, 388, 966, 1091, 1109
HapII CCGG 3 cut(s) 849, 1196, 1433
HhaI GCGC 1 cut(s) 254
Hin1II CATG 3 cut(s) 268, 775, 1485
Hin6I GCGC 1 cut(s) 252
HinP1I GCGC 1 cut(s) 252
HincII GTYRAC 1 cut(s) 610
HindII GTYRAC 1 cut(s) 610
HindIII AAGCTT 1 cut(s) 1362
HinfI GANTC 6 cut(s) 91, 260, 450, 1112, 1347, 1376
HpaI GTTAAC 1 cut(s) 610
HpaII CCGG 3 cut(s) 849, 1196, 1433
HphI GGTGA 3 cut(s) 194, 305, 1316
Hpy166II GTNNAC 3 cut(s) 548, 610, 1307
Hpy188I TCNGA 2 cut(s) 156, 449
Hpy188III TCNNGA 6 cut(s) 434, 519, 569, 1025, 1271, 1469
Hpy8I GTNNAC 3 cut(s) 548, 610, 1307
HpyAV CCTTC 4 cut(s) 377, 529, 671, 1004
HpyCH4III ACNGT 5 cut(s) 242, 396, 545, 1294, 1370
HpyCH4IV ACGT 3 cut(s) 63, 634, 999
HpyF10VI GCNNNNNNNGC 6 cut(s) 278, 668, 842, 905, 1061, 1093
HpyF3I CTNAG 5 cut(s) 12, 503, 894, 904, 1475
HpySE526I ACGT 3 cut(s) 63, 634, 999
Hsp92II CATG 3 cut(s) 268, 775, 1485
HspAI GCGC 1 cut(s) 252
KspAI GTTAAC 1 cut(s) 610
Kzo9I GATC 3 cut(s) 526, 1069, 1273
LmnI GCTCC 5 cut(s) 784, 841, 842, 913, 929
Lsp1109I GCAGC 8 cut(s) 28, 116, 408, 413, 658, 1096, 1390, 1418
LweI GCATC 4 cut(s) 115, 464, 1006, 1152
MaeI CTAG 3 cut(s) 228, 569, 830
MaeII ACGT 3 cut(s) 63, 634, 999
MaeIII GTNAC 3 cut(s) 218, 759, 1022
MalI GATC 3 cut(s) 528, 1071, 1275
MboI GATC 3 cut(s) 526, 1069, 1273
MboII GAAGA 9 cut(s) 39, 89, 392, 694, 959, 1033, 1277, 1331, 1339
MflI RGATCY 1 cut(s) 526
MhlI GDGCHC 2 cut(s) 390, 957
MlsI TGGCCA 1 cut(s) 1091
MluCI AATT 3 cut(s) 118, 313, 1123
MluNI TGGCCA 1 cut(s) 1091
MlyI GAGTC 3 cut(s) 85, 269, 459
MmeI TCCRAC 2 cut(s) 806, 1313
Mox20I TGGCCA 1 cut(s) 1091
MscI TGGCCA 1 cut(s) 1091
MseI TTAA 6 cut(s) 87, 147, 306, 609, 1002, 1392
Msp20I TGGCCA 1 cut(s) 1091
MspA1I CMGCKG 2 cut(s) 655, 1087
MspI CCGG 3 cut(s) 849, 1196, 1433
MspR9I CCNGG 7 cut(s) 291, 840, 942, 963, 1093, 1433, 1434
Mva1269I GAATGC 1 cut(s) 664
MvaI CCWGG 5 cut(s) 291, 840, 942, 963, 1093
MwoI GCNNNNNNNGC 6 cut(s) 278, 668, 842, 905, 1061, 1093
NciI CCSGG 2 cut(s) 1433, 1434
NcoI CCATGG 1 cut(s) 264
NdeII GATC 3 cut(s) 526, 1069, 1273
NlaIII CATG 3 cut(s) 268, 775, 1485
NlaIV GGNNCC 5 cut(s) 162, 388, 735, 992, 1200
NmeAIII GCCGAG 1 cut(s) 272
NmuCI GTSAC 1 cut(s) 1022
PctI GAATGC 1 cut(s) 664
PfeI GAWTC 3 cut(s) 1112, 1347, 1376
PflMI CCANNNNNTGG 1 cut(s) 80
PfoI TCCNGGA 1 cut(s) 838
PkrI GCNGC 8 cut(s) 18, 106, 403, 423, 673, 1086, 1405, 1408
PleI GAGTC 3 cut(s) 85, 268, 458
PpsI GAGTC 3 cut(s) 85, 268, 458
Ppu21I YACGTR 1 cut(s) 635
Psp6I CCWGG 5 cut(s) 289, 838, 940, 961, 1091
PspGI CCWGG 5 cut(s) 289, 838, 940, 961, 1091
PspN4I GGNNCC 5 cut(s) 162, 388, 735, 992, 1200
PspOMI GGGCCC 1 cut(s) 386
PspPI GGNCC 4 cut(s) 160, 386, 387, 494
PstI CTGCAG 2 cut(s) 918, 1408
PsuI RGATCY 1 cut(s) 526
PvuII CAGCTG 1 cut(s) 1087
RsaI GTAC 4 cut(s) 114, 393, 939, 1133
RsaNI GTAC 4 cut(s) 113, 392, 938, 1132
SaqAI TTAA 6 cut(s) 87, 147, 306, 609, 1002, 1392
SatI GCNGC 8 cut(s) 17, 105, 402, 422, 672, 1085, 1404, 1407
Sau3AI GATC 3 cut(s) 526, 1069, 1273
Sau96I GGNCC 4 cut(s) 160, 386, 387, 494
ScaI AGTACT 1 cut(s) 1133
SchI GAGTC 3 cut(s) 85, 269, 459
ScrFI CCNGG 7 cut(s) 291, 840, 942, 963, 1093, 1433, 1434
SduI GDGCHC 2 cut(s) 390, 957
SfaNI GCATC 4 cut(s) 115, 464, 1006, 1152
SfcI CTRYAG 3 cut(s) 914, 1077, 1404
SinI GGWCC 2 cut(s) 160, 494
SmaI CCCGGG 1 cut(s) 1434
SmlI CTYRAG 2 cut(s) 1359, 1469
SmoI CTYRAG 2 cut(s) 1359, 1469
Sse9I AATT 3 cut(s) 118, 313, 1123
SsiI CCGC 4 cut(s) 477, 653, 667, 1019
SspMI CTAG 3 cut(s) 228, 569, 830
StyD4I CCNGG 7 cut(s) 289, 838, 940, 961, 1091, 1431, 1432
StyI CCWWGG 4 cut(s) 74, 264, 324, 621
TaaI ACNGT 5 cut(s) 242, 396, 545, 1294, 1370
TaiI ACGT 3 cut(s) 66, 637, 1002
TaqI TCGA 1 cut(s) 1072
TasI AATT 3 cut(s) 118, 313, 1123
TatI WGTACW 1 cut(s) 1131
TfiI GAWTC 3 cut(s) 1112, 1347, 1376
Tru1I TTAA 6 cut(s) 87, 147, 306, 609, 1002, 1392
Tru9I TTAA 6 cut(s) 87, 147, 306, 609, 1002, 1392
TscAI CASTG 3 cut(s) 583, 1153, 1375
TseFI GTSAC 1 cut(s) 1022
TseI GCWGC 8 cut(s) 16, 104, 401, 421, 671, 1084, 1403, 1406
Tsp45I GTSAC 1 cut(s) 1022
TspDTI ATGAA 3 cut(s) 345, 431, 456
TspMI CCCGGG 1 cut(s) 1432
TspRI CASTG 3 cut(s) 583, 1153, 1375
Van91I CCANNNNNTGG 1 cut(s) 80
VpaK11BI GGWCC 2 cut(s) 160, 494
XapI RAATTY 1 cut(s) 1123
XbaI TCTAGA 1 cut(s) 568
XmaI CCCGGG 1 cut(s) 1432
XspI CTAG 3 cut(s) 228, 569, 830
ZrmI AGTACT 1 cut(s) 1133
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.