Alpha-amylase C-terminal beta-sheet domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G15550 AT5G15550 AT5G15550 |
| fragaria_vesca | FvH4_6g46921 FvH4_6g46921 FvH4_6g46921 FvH4_6g46930 FvH4_6g46930 FvH4_6g46930 FvH4_6g46930 FvH4_6g46930 FvH4_6g46930 FvH4_6g46930 |
| malus_domestica | MD09G1066000.v1.1 MD09G1066100.v1.1 MD17G1058700.v1.1 MD17G1058800.v1.1 |
| prunus_persica | Prupe.3G255400_v2.0.a1 Prupe.3G255500_v2.0.a1 |
| pyrus_communis | pycom111g05550 pycom17g05870 |
| rosa_chinensis | RchiOBHm_Chr2g0165901 RchiOBHm_Chr2g0165911 |
| rosa_laevigata | RLG00000021569 |
| rosa_multiflora | Rmu_co8422767.1_g000001 Rmu_sc0006218.1_g000010 |
| rosa_roxburghii | Rroxscaffold_2G00085310 Rroxscaffold_2G00085320 |
| rosa_rugosa | Rorug02G0519200 Rorug02G0519300 |
| rosa_samantha | Rh2AG584700 Rh2AG584800 Rh2BG596600 Rh2CG567400 Rh2DG606700 Rh2DG606800 |
| rosa_wichuraiana | Rw2G048750 Rw2G048760 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 2 cut(s) | 887, 1791 |
| AccB1I | GGYRCC | 3 cut(s) | 887, 1791, 2244 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1689 |
| AccII | CGCG | 1 cut(s) | 112 |
| AciI | CCGC | 9 cut(s) | 110, 112, 115, 590, 653, 1675, 1958, 2133, 2421 |
| AclWI | GGATC | 8 cut(s) | 375, 1236, 2093, 2414, 2495, 2587, 2737, 2750 |
| AcoI | YGGCCR | 2 cut(s) | 176, 2597 |
| AcsI | RAATTY | 4 cut(s) | 1025, 1529, 2104, 2359 |
| AcuI | CTGAAG | 8 cut(s) | 112, 246, 693, 735, 1113, 1533, 1722, 2100 |
| AcvI | CACGTG | 1 cut(s) | 2546 |
| AcyI | GRCGYC | 1 cut(s) | 2245 |
| AdeI | CACNNNGTG | 1 cut(s) | 2916 |
| AfaI | GTAC | 9 cut(s) | 288, 573, 721, 889, 1194, 1471, 1480, 1793, 1930 |
| AfeI | AGCGCT | 1 cut(s) | 2758 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 68, 642, 643, 1595, 1689, 1730, 2132, 2854 |
| AflIII | ACRYGT | 1 cut(s) | 276 |
| AjiI | CACGTC | 1 cut(s) | 1742 |
| AjnI | CCWGG | 3 cut(s) | 1119, 1723, 2650 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 464, 496, 938, 970, 2053, 2085 |
| Alw21I | GWGCWC | 4 cut(s) | 322, 1526, 1669, 2020 |
| Alw26I | GTCTC | 2 cut(s) | 1058, 1273 |
| AlwI | GGATC | 8 cut(s) | 375, 1236, 2093, 2414, 2495, 2587, 2737, 2750 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 493, 671, 1871 |
| Aor51HI | AGCGCT | 1 cut(s) | 2758 |
| ApoI | RAATTY | 4 cut(s) | 1025, 1529, 2104, 2359 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 797, 829 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 158, 504, 2125 |
| Asp718I | GGTACC | 2 cut(s) | 887, 1791 |
| AspLEI | GCGC | 3 cut(s) | 769, 2247, 2759 |
| AspS9I | GGNCC | 9 cut(s) | 107, 331, 859, 964, 991, 1427, 2075, 2113, 2538 |
| AsuHPI | GGTGA | 2 cut(s) | 803, 2819 |
| AvaII | GGWCC | 3 cut(s) | 859, 991, 1427 |
| AxyI | CCTNAGG | 2 cut(s) | 1557, 2505 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1593, 1626 |
| BalI | TGGCCA | 2 cut(s) | 178, 2599 |
| BamHI | GGATCC | 1 cut(s) | 2742 |
| BanI | GGYRCC | 3 cut(s) | 887, 1791, 2244 |
| BanII | GRGCYC | 1 cut(s) | 1526 |
| BauI | CACGAG | 1 cut(s) | 2607 |
| BbrPI | CACGTG | 1 cut(s) | 2546 |
| BbsI | GAAGAC | 1 cut(s) | 2687 |
| Bbv12I | GWGCWC | 4 cut(s) | 322, 1526, 1669, 2020 |
| BbvCI | CCTCAGC | 1 cut(s) | 396 |
| BceAI | ACGGC | 3 cut(s) | 41, 46, 2100 |
| BciT130I | CCWGG | 3 cut(s) | 1121, 1725, 2652 |
| BclI | TGATCA | 3 cut(s) | 1333, 2164, 2893 |
| BcoDI | GTCTC | 2 cut(s) | 1058, 1273 |
| BfaI | CTAG | 4 cut(s) | 339, 626, 1637, 2816 |
| BfmI | CTRYAG | 6 cut(s) | 494, 663, 756, 881, 1670, 2415 |
| BfoI | RGCGCY | 3 cut(s) | 770, 2248, 2760 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 115 |
| BglII | AGATCT | 1 cut(s) | 1535 |
| Bme1390I | CCNGG | 3 cut(s) | 1121, 1725, 2652 |
| Bme18I | GGWCC | 3 cut(s) | 859, 991, 1427 |
| BmgBI | CACGTC | 1 cut(s) | 1742 |
| BmgT120I | GGNCC | 9 cut(s) | 107, 331, 859, 964, 991, 1427, 2075, 2113, 2538 |
| BmiI | GGNNCC | 8 cut(s) | 889, 1729, 1793, 1853, 2076, 2246, 2744, 2846 |
| BmrFI | CCNGG | 3 cut(s) | 1121, 1725, 2652 |
| BmrI | ACTGGG | 2 cut(s) | 631, 1777 |
| BmsI | GCATC | 9 cut(s) | 337, 544, 994, 1156, 1198, 1214, 1262, 1953, 2368 |
| BmuI | ACTGGG | 2 cut(s) | 631, 1777 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2691 |
| BpiI | GAAGAC | 1 cut(s) | 2687 |
| BpmI | CTGGAG | 5 cut(s) | 1040, 1798, 2292, 2509, 2541 |
| Bpu10I | CCTNAGC | 2 cut(s) | 396, 2216 |
| BpuEI | CTTGAG | 6 cut(s) | 482, 1007, 1237, 1540, 1679, 1866 |
| Bsa29I | ATCGAT | 1 cut(s) | 2011 |
| BsaAI | YACGTR | 1 cut(s) | 2546 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2382 |
| BsaHI | GRCGYC | 1 cut(s) | 2245 |
| BsaJI | CCNNGG | 6 cut(s) | 103, 110, 1493, 1986, 2116, 2430 |
| BsaWI | WCCGGW | 2 cut(s) | 221, 1730 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 284, 314, 1453, 1483, 1983, 2013 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 68, 642, 643, 1595, 1689, 1730, 2132, 2854 |
| Bse118I | RCCGGY | 1 cut(s) | 788 |
| Bse1I | ACTGG | 7 cut(s) | 637, 862, 1772, 2216, 2492, 2524, 2846 |
| Bse21I | CCTNAGG | 2 cut(s) | 1557, 2505 |
| Bse3DI | GCAATG | 3 cut(s) | 76, 1953, 2746 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2382 |
| BseBI | CCWGG | 3 cut(s) | 1121, 1725, 2652 |
| BseCI | ATCGAT | 1 cut(s) | 2011 |
| BseDI | CCNNGG | 6 cut(s) | 103, 110, 1493, 1986, 2116, 2430 |
| BseGI | GGATG | 7 cut(s) | 220, 289, 778, 1458, 2246, 2537, 2647 |
| BseJI | GATNNNNATC | 1 cut(s) | 2382 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 68, 642, 643, 1595, 1689, 1730, 2132, 2854 |
| BseMI | GCAATG | 3 cut(s) | 76, 1953, 2746 |
| BseNI | ACTGG | 7 cut(s) | 637, 862, 1772, 2216, 2492, 2524, 2846 |
| BseRI | GAGGAG | 1 cut(s) | 1869 |
| Bsh1236I | CGCG | 1 cut(s) | 112 |
| BshNI | GGYRCC | 3 cut(s) | 887, 1791, 2244 |
| BshVI | ATCGAT | 1 cut(s) | 2011 |
| BsiHKAI | GWGCWC | 4 cut(s) | 322, 1526, 1669, 2020 |
| BsiSI | CCGG | 4 cut(s) | 222, 789, 1731, 2752 |
| BslFI | GGGAC | 2 cut(s) | 2348, 2604 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 68, 642, 643, 1595, 1689, 1730, 2132, 2854 |
| BsmAI | GTCTC | 2 cut(s) | 1058, 1273 |
| BsmFI | GGGAC | 2 cut(s) | 2348, 2604 |
| Bsp1286I | GDGCHC | 4 cut(s) | 322, 1526, 1669, 2020 |
| Bsp1407I | TGTACA | 2 cut(s) | 286, 1469 |
| BspACI | CCGC | 9 cut(s) | 110, 112, 115, 590, 653, 1675, 1958, 2133, 2421 |
| BspDI | ATCGAT | 1 cut(s) | 2011 |
| BspFNI | CGCG | 1 cut(s) | 112 |
| BspHI | TCATGA | 2 cut(s) | 1972, 2698 |
| BspLI | GGNNCC | 8 cut(s) | 889, 1729, 1793, 1853, 2076, 2246, 2744, 2846 |
| BspMAI | CTGCAG | 2 cut(s) | 498, 1674 |
| BspPI | GGATC | 8 cut(s) | 375, 1236, 2093, 2414, 2495, 2587, 2737, 2750 |
| BspQI | GCTCTTC | 1 cut(s) | 2478 |
| BspT107I | GGYRCC | 3 cut(s) | 887, 1791, 2244 |
| BsrDI | GCAATG | 3 cut(s) | 76, 1953, 2746 |
| BsrFI | RCCGGY | 1 cut(s) | 788 |
| BsrGI | TGTACA | 2 cut(s) | 286, 1469 |
| BsrI | ACTGG | 7 cut(s) | 637, 862, 1772, 2216, 2492, 2524, 2846 |
| BssAI | RCCGGY | 1 cut(s) | 788 |
| BssECI | CCNNGG | 6 cut(s) | 103, 110, 1493, 1986, 2116, 2430 |
| BssNI | GRCGYC | 1 cut(s) | 2245 |
| BssSI | CACGAG | 1 cut(s) | 2607 |
| BssT1I | CCWWGG | 2 cut(s) | 103, 1986 |
| Bst2BI | CACGAG | 1 cut(s) | 2607 |
| Bst2UI | CCWGG | 3 cut(s) | 1121, 1725, 2652 |
| Bst4CI | ACNGT | 8 cut(s) | 248, 254, 744, 830, 892, 1192, 2339, 2914 |
| Bst6I | CTCTTC | 2 cut(s) | 375, 2478 |
| BstACI | GRCGYC | 1 cut(s) | 2245 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 99, 1295 |
| BstAUI | TGTACA | 2 cut(s) | 286, 1469 |
| BstBAI | YACGTR | 1 cut(s) | 2546 |
| BstC8I | GCNNGC | 7 cut(s) | 609, 852, 1329, 1665, 1968, 2067, 2879 |
| BstDSI | CCRYGG | 2 cut(s) | 110, 2116 |
| BstEII | GGTNACC | 1 cut(s) | 791 |
| BstF5I | GGATG | 7 cut(s) | 220, 289, 778, 1458, 2246, 2537, 2647 |
| BstFNI | CGCG | 1 cut(s) | 112 |
| BstH2I | RGCGCY | 3 cut(s) | 770, 2248, 2760 |
| BstHHI | GCGC | 3 cut(s) | 769, 2247, 2759 |
| BstMAI | GTCTC | 2 cut(s) | 1058, 1273 |
| BstNI | CCWGG | 3 cut(s) | 1121, 1725, 2652 |
| BstNSI | RCATGY | 5 cut(s) | 280, 393, 681, 1619, 1970 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2691 |
| BstPI | GGTNACC | 1 cut(s) | 791 |
| BstSCI | CCNGG | 3 cut(s) | 1119, 1723, 2650 |
| BstSFI | CTRYAG | 6 cut(s) | 494, 663, 756, 881, 1670, 2415 |
| BstUI | CGCG | 1 cut(s) | 112 |
| BstV2I | GAAGAC | 1 cut(s) | 2687 |
| BstX2I | RGATCY | 4 cut(s) | 1241, 1535, 2500, 2742 |
| BstYI | RGATCY | 4 cut(s) | 1241, 1535, 2500, 2742 |
| Bsu15I | ATCGAT | 1 cut(s) | 2011 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1557, 2505 |
| BsuTUI | ATCGAT | 1 cut(s) | 2011 |
| BtgI | CCRYGG | 2 cut(s) | 110, 2116 |
| BtgZI | GCGATG | 1 cut(s) | 2369 |
| BtrI | CACGTC | 1 cut(s) | 1742 |
| BtsCI | GGATG | 7 cut(s) | 220, 289, 778, 1458, 2246, 2537, 2647 |
| BtsI | GCAGTG | 2 cut(s) | 1232, 1793 |
| BtsIMutI | CAGTG | 5 cut(s) | 253, 1232, 1793, 1851, 2919 |
| Cac8I | GCNNGC | 7 cut(s) | 609, 852, 1329, 1665, 1968, 2067, 2879 |
| CaiI | CAGNNNCTG | 3 cut(s) | 493, 671, 1871 |
| CciI | TCATGA | 2 cut(s) | 1972, 2698 |
| CfoI | GCGC | 3 cut(s) | 769, 2247, 2759 |
| Cfr10I | RCCGGY | 1 cut(s) | 788 |
| Cfr13I | GGNCC | 9 cut(s) | 107, 331, 859, 964, 991, 1427, 2075, 2113, 2538 |
| Cfr42I | CCGCGG | 1 cut(s) | 113 |
| ClaI | ATCGAT | 1 cut(s) | 2011 |
| CseI | GACGC | 1 cut(s) | 801 |
| Csp6I | GTAC | 9 cut(s) | 287, 572, 720, 888, 1193, 1470, 1479, 1792, 1929 |
| CviQI | GTAC | 9 cut(s) | 287, 572, 720, 888, 1193, 1470, 1479, 1792, 1929 |
| DinI | GGCGCC | 1 cut(s) | 2246 |
| DraIII | CACNNNGTG | 1 cut(s) | 2916 |
| EaeI | YGGCCR | 2 cut(s) | 176, 2597 |
| Eam1104I | CTCTTC | 2 cut(s) | 375, 2478 |
| EarI | CTCTTC | 2 cut(s) | 375, 2478 |
| Ecl136II | GAGCTC | 1 cut(s) | 1524 |
| Eco130I | CCWWGG | 2 cut(s) | 103, 1986 |
| Eco24I | GRGCYC | 1 cut(s) | 1526 |
| Eco47I | GGWCC | 3 cut(s) | 859, 991, 1427 |
| Eco47III | AGCGCT | 1 cut(s) | 2758 |
| Eco53kI | GAGCTC | 1 cut(s) | 1524 |
| Eco57I | CTGAAG | 8 cut(s) | 112, 246, 693, 735, 1113, 1533, 1722, 2100 |
| Eco72I | CACGTG | 1 cut(s) | 2546 |
| Eco81I | CCTNAGG | 2 cut(s) | 1557, 2505 |
| Eco91I | GGTNACC | 1 cut(s) | 791 |
| EcoICRI | GAGCTC | 1 cut(s) | 1524 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2075 |
| EcoO65I | GGTNACC | 1 cut(s) | 791 |
| EcoRI | GAATTC | 1 cut(s) | 1529 |
| EcoRII | CCWGG | 3 cut(s) | 1119, 1723, 2650 |
| EcoT14I | CCWWGG | 2 cut(s) | 103, 1986 |
| EcoT22I | ATGCAT | 2 cut(s) | 1968, 2635 |
| EcoT38I | GRGCYC | 1 cut(s) | 1526 |
| EgeI | GGCGCC | 1 cut(s) | 2246 |
| EheI | GGCGCC | 1 cut(s) | 2246 |
| ErhI | CCWWGG | 2 cut(s) | 103, 1986 |
| FaqI | GGGAC | 2 cut(s) | 2348, 2604 |
| FauI | CCCGC | 1 cut(s) | 2126 |
| FauNDI | CATATG | 1 cut(s) | 1924 |
| FbaI | TGATCA | 3 cut(s) | 1333, 2164, 2893 |
| FokI | GGATG | 7 cut(s) | 227, 296, 785, 1465, 2253, 2544, 2634 |
| FriOI | GRGCYC | 1 cut(s) | 1526 |
| FspBI | CTAG | 4 cut(s) | 339, 626, 1637, 2816 |
| GlaI | GCGC | 3 cut(s) | 768, 2246, 2758 |
| GsuI | CTGGAG | 5 cut(s) | 1040, 1798, 2292, 2509, 2541 |
| HaeII | RGCGCY | 3 cut(s) | 770, 2248, 2760 |
| HapII | CCGG | 4 cut(s) | 222, 789, 1731, 2752 |
| HgaI | GACGC | 1 cut(s) | 801 |
| HhaI | GCGC | 3 cut(s) | 769, 2247, 2759 |
| Hin1I | GRCGYC | 1 cut(s) | 2245 |
| Hin6I | GCGC | 3 cut(s) | 767, 2245, 2757 |
| HinP1I | GCGC | 3 cut(s) | 767, 2245, 2757 |
| HincII | GTYRAC | 1 cut(s) | 241 |
| HindII | GTYRAC | 1 cut(s) | 241 |
| HindIII | AAGCTT | 3 cut(s) | 2063, 2298, 2615 |
| HpaII | CCGG | 4 cut(s) | 222, 789, 1731, 2752 |
| HphI | GGTGA | 2 cut(s) | 803, 2819 |
| Hpy166II | GTNNAC | 5 cut(s) | 74, 241, 839, 1683, 2513 |
| Hpy8I | GTNNAC | 5 cut(s) | 74, 241, 839, 1683, 2513 |
| HpyCH4III | ACNGT | 8 cut(s) | 248, 254, 744, 830, 892, 1192, 2339, 2914 |
| HpyCH4IV | ACGT | 4 cut(s) | 933, 1195, 1741, 2545 |
| HpySE526I | ACGT | 4 cut(s) | 933, 1195, 1741, 2545 |
| Hsp92I | GRCGYC | 1 cut(s) | 2245 |
| HspAI | GCGC | 3 cut(s) | 767, 2245, 2757 |
| KasI | GGCGCC | 1 cut(s) | 2244 |
| KpnI | GGTACC | 2 cut(s) | 891, 1795 |
| Ksp22I | TGATCA | 3 cut(s) | 1333, 2164, 2893 |
| KspI | CCGCGG | 1 cut(s) | 113 |
| LguI | GCTCTTC | 1 cut(s) | 2478 |
| LmnI | GCTCC | 6 cut(s) | 1087, 1810, 1882, 2754, 2874, 2900 |
| LweI | GCATC | 9 cut(s) | 337, 544, 994, 1156, 1198, 1214, 1262, 1953, 2368 |
| MaeI | CTAG | 4 cut(s) | 339, 626, 1637, 2816 |
| MaeII | ACGT | 4 cut(s) | 933, 1195, 1741, 2545 |
| MfeI | CAATTG | 1 cut(s) | 2085 |
| MflI | RGATCY | 4 cut(s) | 1241, 1535, 2500, 2742 |
| MhlI | GDGCHC | 4 cut(s) | 322, 1526, 1669, 2020 |
| MlsI | TGGCCA | 2 cut(s) | 178, 2599 |
| MluNI | TGGCCA | 2 cut(s) | 178, 2599 |
| Mly113I | GGCGCC | 1 cut(s) | 2245 |
| MlyI | GAGTC | 4 cut(s) | 844, 1060, 2038, 2804 |
| MmeI | TCCRAC | 3 cut(s) | 261, 930, 936 |
| Mox20I | TGGCCA | 2 cut(s) | 178, 2599 |
| Mph1103I | ATGCAT | 2 cut(s) | 1968, 2635 |
| MroXI | GAANNNNTTC | 3 cut(s) | 158, 504, 2125 |
| MscI | TGGCCA | 2 cut(s) | 178, 2599 |
| MseI | TTAA | 8 cut(s) | 302, 312, 702, 1362, 1944, 2207, 2400, 2495 |
| MslI | CAYNNNNRTG | 4 cut(s) | 1405, 1846, 1971, 2013 |
| Msp20I | TGGCCA | 2 cut(s) | 178, 2599 |
| MspA1I | CMGCKG | 5 cut(s) | 112, 653, 668, 1331, 1675 |
| MspI | CCGG | 4 cut(s) | 222, 789, 1731, 2752 |
| MspR9I | CCNGG | 3 cut(s) | 1121, 1725, 2652 |
| MunI | CAATTG | 1 cut(s) | 2085 |
| MvaI | CCWGG | 3 cut(s) | 1121, 1725, 2652 |
| MvnI | CGCG | 1 cut(s) | 112 |
| NarI | GGCGCC | 1 cut(s) | 2245 |
| NdeI | CATATG | 1 cut(s) | 1924 |
| NlaIV | GGNNCC | 8 cut(s) | 889, 1729, 1793, 1853, 2076, 2246, 2744, 2846 |
| NmeAIII | GCCGAG | 2 cut(s) | 1898, 2411 |
| NmuCI | GTSAC | 6 cut(s) | 248, 791, 824, 929, 2443, 2807 |
| NsiI | ATGCAT | 2 cut(s) | 1968, 2635 |
| NspI | RCATGY | 5 cut(s) | 280, 393, 681, 1619, 1970 |
| PaeI | GCATGC | 1 cut(s) | 1970 |
| PagI | TCATGA | 2 cut(s) | 1972, 2698 |
| PciI | ACATGT | 1 cut(s) | 276 |
| PciSI | GCTCTTC | 1 cut(s) | 2478 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2835 |
| PdmI | GAANNNNTTC | 3 cut(s) | 158, 504, 2125 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1689 |
| PfoI | TCCNGGA | 1 cut(s) | 2650 |
| PleI | GAGTC | 4 cut(s) | 843, 1059, 2037, 2804 |
| PluTI | GGCGCC | 1 cut(s) | 2248 |
| PmaCI | CACGTG | 1 cut(s) | 2546 |
| PmlI | CACGTG | 1 cut(s) | 2546 |
| PpsI | GAGTC | 4 cut(s) | 843, 1059, 2037, 2804 |
| Ppu21I | YACGTR | 1 cut(s) | 2546 |
| PscI | ACATGT | 1 cut(s) | 276 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2691 |
| Psp124BI | GAGCTC | 1 cut(s) | 1526 |
| Psp6I | CCWGG | 3 cut(s) | 1119, 1723, 2650 |
| PspCI | CACGTG | 1 cut(s) | 2546 |
| PspEI | GGTNACC | 1 cut(s) | 791 |
| PspGI | CCWGG | 3 cut(s) | 1119, 1723, 2650 |
| PspN4I | GGNNCC | 8 cut(s) | 889, 1729, 1793, 1853, 2076, 2246, 2744, 2846 |
| PspPI | GGNCC | 9 cut(s) | 107, 331, 859, 964, 991, 1427, 2075, 2113, 2538 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 555, 587 |
| PstI | CTGCAG | 2 cut(s) | 498, 1674 |
| PstNI | CAGNNNCTG | 3 cut(s) | 493, 671, 1871 |
| PsuI | RGATCY | 4 cut(s) | 1241, 1535, 2500, 2742 |
| PvuII | CAGCTG | 2 cut(s) | 668, 1331 |
| RsaI | GTAC | 9 cut(s) | 288, 573, 721, 889, 1194, 1471, 1480, 1793, 1930 |
| RsaNI | GTAC | 9 cut(s) | 287, 572, 720, 888, 1193, 1470, 1479, 1792, 1929 |
| RseI | CAYNNNNRTG | 4 cut(s) | 1405, 1846, 1971, 2013 |
| SacI | GAGCTC | 1 cut(s) | 1526 |
| SacII | CCGCGG | 1 cut(s) | 113 |
| SapI | GCTCTTC | 1 cut(s) | 2478 |
| SaqAI | TTAA | 8 cut(s) | 302, 312, 702, 1362, 1944, 2207, 2400, 2495 |
| Sau96I | GGNCC | 9 cut(s) | 107, 331, 859, 964, 991, 1427, 2075, 2113, 2538 |
| SchI | GAGTC | 4 cut(s) | 844, 1060, 2038, 2804 |
| ScrFI | CCNGG | 3 cut(s) | 1121, 1725, 2652 |
| SduI | GDGCHC | 4 cut(s) | 322, 1526, 1669, 2020 |
| SfaNI | GCATC | 9 cut(s) | 337, 544, 994, 1156, 1198, 1214, 1262, 1953, 2368 |
| SfcI | CTRYAG | 6 cut(s) | 494, 663, 756, 881, 1670, 2415 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 115 |
| SfoI | GGCGCC | 1 cut(s) | 2246 |
| Sfr303I | CCGCGG | 1 cut(s) | 113 |
| SgrBI | CCGCGG | 1 cut(s) | 113 |
| SinI | GGWCC | 3 cut(s) | 859, 991, 1427 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 1405, 1846, 1971, 2013 |
| SmlI | CTYRAG | 6 cut(s) | 461, 986, 1216, 1519, 1658, 1881 |
| SmoI | CTYRAG | 6 cut(s) | 461, 986, 1216, 1519, 1658, 1881 |
| SphI | GCATGC | 1 cut(s) | 1970 |
| SsiI | CCGC | 9 cut(s) | 110, 112, 115, 590, 653, 1675, 1958, 2133, 2421 |
| SspDI | GGCGCC | 1 cut(s) | 2244 |
| SspI | AATATT | 3 cut(s) | 1949, 2161, 2330 |
| SspMI | CTAG | 4 cut(s) | 339, 626, 1637, 2816 |
| SstI | GAGCTC | 1 cut(s) | 1526 |
| StyD4I | CCNGG | 3 cut(s) | 1119, 1723, 2650 |
| StyI | CCWWGG | 2 cut(s) | 103, 1986 |
| TaaI | ACNGT | 8 cut(s) | 248, 254, 744, 830, 892, 1192, 2339, 2914 |
| TaiI | ACGT | 4 cut(s) | 936, 1198, 1744, 2548 |
| TaqI | TCGA | 7 cut(s) | 483, 731, 746, 1611, 2011, 2838, 2852 |
| TaqII | GACCGA | 1 cut(s) | 847 |
| TatI | WGTACW | 3 cut(s) | 286, 571, 1469 |
| TauI | GCSGC | 5 cut(s) | 112, 115, 118, 656, 2424 |
| Tru1I | TTAA | 8 cut(s) | 302, 312, 702, 1362, 1944, 2207, 2400, 2495 |
| Tru9I | TTAA | 8 cut(s) | 302, 312, 702, 1362, 1944, 2207, 2400, 2495 |
| TscAI | CASTG | 5 cut(s) | 253, 1239, 1793, 1851, 2919 |
| TseFI | GTSAC | 6 cut(s) | 248, 791, 824, 929, 2443, 2807 |
| Tsp45I | GTSAC | 6 cut(s) | 248, 791, 824, 929, 2443, 2807 |
| TspGWI | ACGGA | 1 cut(s) | 1466 |
| TspRI | CASTG | 5 cut(s) | 253, 1239, 1793, 1851, 2919 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1689 |
| VpaK11BI | GGWCC | 3 cut(s) | 859, 991, 1427 |
| XapI | RAATTY | 4 cut(s) | 1025, 1529, 2104, 2359 |
| XceI | RCATGY | 5 cut(s) | 280, 393, 681, 1619, 1970 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2040 |
| XmnI | GAANNNNTTC | 3 cut(s) | 158, 504, 2125 |
| XspI | CTAG | 4 cut(s) | 339, 626, 1637, 2816 |
| Zsp2I | ATGCAT | 2 cut(s) | 1968, 2635 |