Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0003013

Physical Location & Seq

Genomic Coordinates Reverse (-)

4791756 .. 4796215

Gene Structure 4460 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1058800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1545 bp

ATGGACGCCGACGGAAATTCCGAAGAGCCATCGCGGTTGGTCCTCGTCCGCTTCAAAACGGACCTCGGCCACCCCTACAAAGTTCCAGAATCCTCCATTTCCATCCCCGCCAGTCTCACCCGCTTCGGCCTCTCCACCGTCGTCAACAACCTCATTACATCAGGAAACCCTGATTGGGAATCGGAGCCTTTCGATTTCCTTATCAAGCATGAGCTGGTTCGGATGTCGATTGAAAAGTTCCTTGTTGCCAAGAACATTTCCGCGGAGAGGATATTGGAGATCGAATATATACGGGCTGTGGTCCCACGGAAAGAAGAAGAACCTTCTTTACACAATGAATGGGTTAGTGCAGTTGATGGTTCTAGTCCCAGGTTCTTTTTGACAGGCTGCTATGATGGCTTGGGAAGGGTGTGGAAAGCCCCTGGAGCATGTACACATATACTGGAAGGACACAGTGGACCCGTTACTTCAGTTAGTATAATCAATCCAAAAGGATACTGTTGTTATCAGTTCTCTAGTGAATGTCAGTTGGCACTGTCAACTACTTACAATTTTTCAGTTCTGGCCTTTAGAGGACCAAGTTATTATGGCATCCTCATTGTTTTTGCTTTTGGATTTGAAAACCTTTTCATGTCTAATGGGATACTTCTGTGCATGAATTTCTGTTTGTGTGGAGAAAGTGTTACCGTAGCTACTGCTTCGAAAGATCGGACACTGAGGCTGTGGAACTTAATTGGACGACCATACTGTTTTTATAAGGATAGTATGACGTGTATACTAAATCTTTATTATTTGTTTTTTGGGGAAGTTCAATGCAGAAGAGACCCGAAAAAATCCTTTGAGGATAAGAGCATTCAAAATTTTACATGGACATACAGCAGCTGTTCAAAGTGTTGCTGCTCAGACCTCTGGAAACATGGCTCTTGGGATTCCACTATCAATTTATGGCAGACAAATGAGCCTGATGCAGAAGGTGATACTGTGTCAACAAAGAAGAGAAAAAAGACTGGTCAAGAAAAGGAATTGCAGTTGGAGGGAGAGGCTGTTTCTTCTCTAGTAGGTCATACACAATGCGTATCTTCCGTAAAGTGGCCAGAGCCTAAAACAATCTATTCTGCATCATGGGACCATTCTATTAAAGAGTGGAATGTCGAGAGAGGCACAGCCACGTCGACAATAGTAATACTCAACTGCATTGATATTGGAGGTGAAGGATCTGCTTTGATTGCTGCTGGTGGTTCTGACCCCATTGTTAGGGTATGGGATCCTCGTAAACCAGGAACCTCTGCTTCTATCAAAACTTTCTCATCTCACACTTCTTGGGTTACGGCGTGCAAGTGGCATGACAAGTCTCCGTTTCATTTAGTCTCTGCATCTCATGATGGAAAAGTTATGCTGTGGGATACGAGAACTGCTGCGCTATGCGCCGACTGGTGGAAAGGTGATACTGTGCTTAGTGGTGGTGCAGATTTCAAGCTTTGCATGACGTCCGGGGTTTCTGTCCCTCCCAACTATCAAAGCACAGAAAGTTACTACGCTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0000460 GO:0000470 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005911 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0022613 GO:0030054 GO:0030684 GO:0030686 GO:0030687 GO:0031461 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0055044 GO:0070013 GO:0070545 GO:0071704 GO:0071840 GO:0080008 GO:0090304 GO:1901360 GO:1902494 GO:1990234 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NLE WD40

Protein Analysis

515

Amino Acids

57.29

Weight (kDa)

6.14

Isoelectric Point (pI)

37.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NLE	PF08154	14 - 81	1.8e-17	NLE (NUC135) domain
Beta-prop_TEP1_2nd	PF25047	307 - 472	3.2e-10	TEP-1 second beta-propeller
WD40_CDC20-Fz	PF24807	347 - 476	5.2e-09	CDC20/Fizzy WD40 domain
WD40_Prp19	PF24814	396 - 472	3.2e-08	Prp19 WD40 domain
WD40_WDHD1_1st	PF24817	397 - 474	8.2e-06	WDHD1 first WD40 domain
Beta-prop_WDR5	PF25175	406 - 473	9.6e-10	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	406 - 471	2.1e-08	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	408 - 473	6.6e-13	THOC3 beta-propeller domain
WD40	PF00400	431 - 468	2.1e-07	WD domain, G-beta repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003013)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15550 AT5G15550 AT5G15550
fragaria_vesca	FvH4_6g46921 FvH4_6g46921 FvH4_6g46921 FvH4_6g46930 FvH4_6g46930 FvH4_6g46930 FvH4_6g46930 FvH4_6g46930 FvH4_6g46930 FvH4_6g46930
malus_domestica	MD09G1066000.v1.1 MD09G1066100.v1.1 MD17G1058700.v1.1 MD17G1058800.v1.1
prunus_persica	Prupe.3G255400_v2.0.a1 Prupe.3G255500_v2.0.a1
pyrus_communis	pycom111g05550 pycom17g05870
rosa_chinensis	RchiOBHm_Chr2g0165901 RchiOBHm_Chr2g0165911
rosa_laevigata	RLG00000021569
rosa_multiflora	Rmu_co8422767.1_g000001 Rmu_sc0006218.1_g000010
rosa_roxburghii	Rroxscaffold_2G00085310 Rroxscaffold_2G00085320
rosa_rugosa	Rorug02G0519200 Rorug02G0519300
rosa_samantha	Rh2AG584700 Rh2AG584800 Rh2BG596600 Rh2CG567400 Rh2DG606700 Rh2DG606800
rosa_wichuraiana	Rw2G048750 Rw2G048760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	756
AatII	GACGTC	1 cut(s)	1490
AccI	GTMKAC	2 cut(s)	775, 1172
AccII	CGCG	2 cut(s)	34, 263
AciI	CCGC	6 cut(s)	34, 49, 108, 121, 261, 263
AclWI	GGATC	3 cut(s)	1222, 1259, 1272
AcoI	YGGCCR	2 cut(s)	67, 1091
AcsI	RAATTY	3 cut(s)	16, 658, 859
AcuI	CTGAAG	1 cut(s)	453
AcyI	GRCGYC	2 cut(s)	6, 1487
AfaI	GTAC	1 cut(s)	433
AfiI	CCNNNNNNNGG	5 cut(s)	175, 267, 1089, 1254, 1434
AflIII	ACRYGT	1 cut(s)	770
AgsI	TTSAA	7 cut(s)	55, 233, 620, 812, 857, 888, 1474
AjiI	CACGTC	2 cut(s)	771, 1170
AjnI	CCWGG	3 cut(s)	368, 421, 1276
AjuI	GAANNNNNNNTTGG	2 cut(s)	157, 189
AluBI	AGCT	4 cut(s)	214, 692, 882, 1477
AluI	AGCT	4 cut(s)	214, 692, 882, 1477
Alw26I	GTCTC	4 cut(s)	119, 816, 1356, 1372
AlwI	GGATC	3 cut(s)	1222, 1259, 1272
AlwNI	CAGNNNCTG	1 cut(s)	882
AoxI	GGCC	4 cut(s)	67, 127, 564, 1091
ApeKI	GCWGC	5 cut(s)	387, 879, 897, 1229, 1415
ApoI	RAATTY	3 cut(s)	16, 658, 859
AspLEI	GCGC	2 cut(s)	1420, 1427
AspS9I	GGNCC	6 cut(s)	40, 61, 301, 458, 575, 1126
AsuC2I	CCSGG	1 cut(s)	1492
AsuHPI	GGTGA	4 cut(s)	109, 986, 1220, 1454
AsuII	TTCGAA	1 cut(s)	701
AvaII	GGWCC	6 cut(s)	40, 61, 301, 458, 575, 1126
BaeI	ACNNNNGTAYC	4 cut(s)	487, 520, 635, 668
BalI	TGGCCA	1 cut(s)	1093
BamHI	GGATCC	1 cut(s)	1264
BbvI	GCAGC	5 cut(s)	374, 884, 891, 1216, 1402
BccI	CCATC	5 cut(s)	37, 110, 350, 389, 1376
BceAI	ACGGC	1 cut(s)	1344
BciT130I	CCWGG	3 cut(s)	370, 423, 1278
BciVI	GTATCC	3 cut(s)	488, 636, 1396
BcnI	CCSGG	1 cut(s)	1492
BcoDI	GTCTC	4 cut(s)	119, 816, 1356, 1372
BfaI	CTAG	3 cut(s)	363, 516, 1055
BfuI	GTATCC	3 cut(s)	488, 636, 1396
BisI	GCNGC	5 cut(s)	388, 880, 898, 1230, 1416
BlsI	GCNGC	5 cut(s)	389, 881, 899, 1231, 1417
Bme1390I	CCNGG	4 cut(s)	370, 423, 1278, 1492
Bme18I	GGWCC	6 cut(s)	40, 61, 301, 458, 575, 1126
BmgBI	CACGTC	2 cut(s)	771, 1170
BmgT120I	GGNCC	6 cut(s)	40, 61, 301, 458, 575, 1126
BmiI	GGNNCC	6 cut(s)	186, 303, 460, 1127, 1266, 1282
BmrFI	CCNGG	4 cut(s)	370, 423, 1278, 1492
BmsI	GCATC	4 cut(s)	600, 955, 1127, 1382
BpmI	CTGGAG	1 cut(s)	444
Bpu14I	TTCGAA	1 cut(s)	701
BpuMI	CCSGG	1 cut(s)	1492
BsaHI	GRCGYC	2 cut(s)	6, 1487
BsaI	GGTCTC	1 cut(s)	816
BsaJI	CCNNGG	6 cut(s)	64, 261, 305, 368, 421, 1491
BsaXI	ACNNNNNCTCC	4 cut(s)	666, 696, 1029, 1059
Bsc4I	CCNNNNNNNGG	5 cut(s)	175, 267, 1089, 1254, 1434
Bse1I	ACTGG	4 cut(s)	111, 447, 1012, 1436
BseBI	CCWGG	3 cut(s)	370, 423, 1278
BseDI	CCNNGG	6 cut(s)	64, 261, 305, 368, 421, 1491
BseGI	GGATG	3 cut(s)	102, 228, 591
BseLI	CCNNNNNNNGG	5 cut(s)	175, 267, 1089, 1254, 1434
BseMII	CTCAG	2 cut(s)	707, 915
BseNI	ACTGG	4 cut(s)	111, 447, 1012, 1436
BseXI	GCAGC	5 cut(s)	374, 884, 891, 1216, 1402
BsgI	GTGCAG	2 cut(s)	369, 1485
Bsh1236I	CGCG	2 cut(s)	34, 263
BshFI	GGCC	4 cut(s)	69, 129, 566, 1093
BsiSI	CCGG	1 cut(s)	1491
BslFI	GGGAC	4 cut(s)	287, 351, 1139, 1487
BslI	CCNNNNNNNGG	5 cut(s)	175, 267, 1089, 1254, 1434
BsmAI	GTCTC	4 cut(s)	119, 816, 1356, 1372
BsmFI	GGGAC	4 cut(s)	287, 351, 1139, 1487
BsmI	GAATGC	1 cut(s)	852
BsnI	GGCC	4 cut(s)	69, 129, 566, 1093
Bso31I	GGTCTC	1 cut(s)	816
Bsp119I	TTCGAA	1 cut(s)	701
Bsp1407I	TGTACA	1 cut(s)	431
Bsp143I	GATC	4 cut(s)	279, 706, 1214, 1264
BspACI	CCGC	6 cut(s)	34, 49, 108, 121, 261, 263
BspANI	GGCC	4 cut(s)	69, 129, 566, 1093
BspCNI	CTCAG	2 cut(s)	708, 914
BspFNI	CGCG	2 cut(s)	34, 263
BspHI	TCATGA	1 cut(s)	1378
BspLI	GGNNCC	6 cut(s)	186, 303, 460, 1127, 1266, 1282
BspPI	GGATC	3 cut(s)	1222, 1259, 1272
BspQI	GCTCTTC	1 cut(s)	18
BspT104I	TTCGAA	1 cut(s)	701
BspTNI	GGTCTC	1 cut(s)	816
BsrGI	TGTACA	1 cut(s)	431
BsrI	ACTGG	4 cut(s)	111, 447, 1012, 1436
BssECI	CCNNGG	6 cut(s)	64, 261, 305, 368, 421, 1491
BssMI	GATC	4 cut(s)	279, 706, 1214, 1264
BssNAI	GTATAC	1 cut(s)	776
BssNI	GRCGYC	2 cut(s)	6, 1487
Bst1107I	GTATAC	1 cut(s)	776
Bst2UI	CCWGG	3 cut(s)	370, 423, 1278
Bst4CI	ACNGT	8 cut(s)	139, 455, 500, 537, 688, 749, 982, 1450
Bst6I	CTCTTC	3 cut(s)	18, 814, 989
BstACI	GRCGYC	2 cut(s)	6, 1487
BstAUI	TGTACA	1 cut(s)	431
BstBI	TTCGAA	1 cut(s)	701
BstC8I	GCNNGC	1 cut(s)	1333
BstDEI	CTNAG	3 cut(s)	716, 901, 1454
BstDSI	CCRYGG	2 cut(s)	261, 305
BstF5I	GGATG	3 cut(s)	102, 228, 591
BstFNI	CGCG	2 cut(s)	34, 263
BstHHI	GCGC	2 cut(s)	1420, 1427
BstKTI	GATC	4 cut(s)	282, 709, 1217, 1267
BstMAI	GTCTC	4 cut(s)	119, 816, 1356, 1372
BstMBI	GATC	4 cut(s)	279, 706, 1214, 1264
BstMWI	GCNNNNNNNGC	4 cut(s)	396, 425, 1226, 1424
BstNI	CCWGG	3 cut(s)	370, 423, 1278
BstNSI	RCATGY	1 cut(s)	432
BstSCI	CCNGG	4 cut(s)	368, 421, 1276, 1490
BstUI	CGCG	2 cut(s)	34, 263
BstV1I	GCAGC	5 cut(s)	374, 884, 891, 1216, 1402
BstX2I	RGATCY	2 cut(s)	1214, 1264
BstYI	RGATCY	2 cut(s)	1214, 1264
BstZ17I	GTATAC	1 cut(s)	776
BsuI	GTATCC	3 cut(s)	488, 636, 1396
BsuRI	GGCC	4 cut(s)	69, 129, 566, 1093
BtgI	CCRYGG	2 cut(s)	261, 305
BtgZI	GCGATG	1 cut(s)	15
BtrI	CACGTC	2 cut(s)	771, 1170
BtsCI	GGATG	3 cut(s)	102, 228, 591
BtsIMutI	CAGTG	3 cut(s)	460, 533, 713
Cac8I	GCNNGC	1 cut(s)	1333
CaiI	CAGNNNCTG	1 cut(s)	882
CciI	TCATGA	1 cut(s)	1378
CfoI	GCGC	2 cut(s)	1420, 1427
Cfr13I	GGNCC	6 cut(s)	40, 61, 301, 458, 575, 1126
Cfr42I	CCGCGG	1 cut(s)	264
CseI	GACGC	1 cut(s)	14
Csp6I	GTAC	1 cut(s)	432
CviQI	GTAC	1 cut(s)	432
DdeI	CTNAG	3 cut(s)	716, 901, 1454
DpnI	GATC	4 cut(s)	281, 708, 1216, 1266
DpnII	GATC	4 cut(s)	279, 706, 1214, 1264
EaeI	YGGCCR	2 cut(s)	67, 1091
Eam1104I	CTCTTC	3 cut(s)	18, 814, 989
EarI	CTCTTC	3 cut(s)	18, 814, 989
Eco31I	GGTCTC	1 cut(s)	816
Eco47I	GGWCC	6 cut(s)	40, 61, 301, 458, 575, 1126
Eco57I	CTGAAG	1 cut(s)	453
EcoRII	CCWGG	3 cut(s)	368, 421, 1276
FaqI	GGGAC	4 cut(s)	287, 351, 1139, 1487
FauI	CCCGC	2 cut(s)	115, 128
FblI	GTMKAC	2 cut(s)	775, 1172
Fnu4HI	GCNGC	5 cut(s)	388, 880, 898, 1230, 1416
FokI	GGATG	3 cut(s)	89, 235, 578
Fsp4HI	GCNGC	5 cut(s)	388, 880, 898, 1230, 1416
FspBI	CTAG	3 cut(s)	363, 516, 1055
GlaI	GCGC	2 cut(s)	1419, 1426
GluI	GCNGC	5 cut(s)	388, 880, 898, 1230, 1416
GsuI	CTGGAG	1 cut(s)	444
HaeIII	GGCC	4 cut(s)	69, 129, 566, 1093
HapII	CCGG	1 cut(s)	1491
HgaI	GACGC	1 cut(s)	14
HhaI	GCGC	2 cut(s)	1420, 1427
Hin1I	GRCGYC	2 cut(s)	6, 1487
Hin6I	GCGC	2 cut(s)	1418, 1425
HinP1I	GCGC	2 cut(s)	1418, 1425
HincII	GTYRAC	4 cut(s)	145, 540, 987, 1173
HindII	GTYRAC	4 cut(s)	145, 540, 987, 1173
HindIII	AAGCTT	1 cut(s)	1475
HinfI	GANTC	3 cut(s)	89, 179, 929
HpaII	CCGG	1 cut(s)	1491
HphI	GGTGA	4 cut(s)	109, 986, 1220, 1454
Hpy166II	GTNNAC	8 cut(s)	145, 434, 458, 540, 776, 987, 1173, 1274
Hpy188I	TCNGA	6 cut(s)	22, 184, 222, 711, 904, 1243
Hpy188III	TCNNGA	6 cut(s)	86, 162, 910, 1013, 1153, 1379
Hpy8I	GTNNAC	8 cut(s)	145, 434, 458, 540, 776, 987, 1173, 1274
Hpy99I	CGWCG	3 cut(s)	14, 143, 1174
HpyAV	CCTTC	5 cut(s)	333, 399, 440, 965, 1205
HpyCH4III	ACNGT	8 cut(s)	139, 455, 500, 537, 688, 749, 982, 1450
HpyCH4IV	ACGT	3 cut(s)	770, 1169, 1487
HpyF10VI	GCNNNNNNNGC	4 cut(s)	396, 425, 1226, 1424
HpyF3I	CTNAG	3 cut(s)	716, 901, 1454
HpySE526I	ACGT	3 cut(s)	770, 1169, 1487
Hsp92I	GRCGYC	2 cut(s)	6, 1487
HspAI	GCGC	2 cut(s)	1418, 1425
KspI	CCGCGG	1 cut(s)	264
Kzo9I	GATC	4 cut(s)	279, 706, 1214, 1264
LguI	GCTCTTC	1 cut(s)	18
LmnI	GCTCC	2 cut(s)	184, 425
Lsp1109I	GCAGC	5 cut(s)	374, 884, 891, 1216, 1402
LweI	GCATC	4 cut(s)	600, 955, 1127, 1382
MaeI	CTAG	3 cut(s)	363, 516, 1055
MaeII	ACGT	3 cut(s)	770, 1169, 1487
MaeIII	GTNAC	4 cut(s)	463, 682, 1324, 1529
MalI	GATC	4 cut(s)	281, 708, 1216, 1266
MboI	GATC	4 cut(s)	279, 706, 1214, 1264
MboII	GAAGA	7 cut(s)	35, 326, 329, 831, 1006, 1041, 1071
MflI	RGATCY	2 cut(s)	1214, 1264
MlsI	TGGCCA	1 cut(s)	1093
MluCI	AATT	7 cut(s)	16, 550, 658, 732, 859, 940, 1022
MluNI	TGGCCA	1 cut(s)	1093
MmeI	TCCRAC	1 cut(s)	1011
Mox20I	TGGCCA	1 cut(s)	1093
MscI	TGGCCA	1 cut(s)	1093
MseI	TTAA	2 cut(s)	731, 1137
Msp20I	TGGCCA	1 cut(s)	1093
MspA1I	CMGCKG	2 cut(s)	263, 882
MspI	CCGG	1 cut(s)	1491
MspR9I	CCNGG	4 cut(s)	370, 423, 1278, 1492
Mva1269I	GAATGC	1 cut(s)	852
MvaI	CCWGG	3 cut(s)	370, 423, 1278
MvnI	CGCG	2 cut(s)	34, 263
MwoI	GCNNNNNNNGC	4 cut(s)	396, 425, 1226, 1424
NciI	CCSGG	1 cut(s)	1492
NdeII	GATC	4 cut(s)	279, 706, 1214, 1264
NlaIV	GGNNCC	6 cut(s)	186, 303, 460, 1127, 1266, 1282
NmeAIII	GCCGAG	1 cut(s)	45
NspI	RCATGY	1 cut(s)	432
NspV	TTCGAA	1 cut(s)	701
PagI	TCATGA	1 cut(s)	1378
PciSI	GCTCTTC	1 cut(s)	18
PcsI	WCGNNNNNNNCGW	1 cut(s)	18
PctI	GAATGC	1 cut(s)	852
PfeI	GAWTC	3 cut(s)	89, 179, 929
PkrI	GCNGC	5 cut(s)	389, 881, 899, 1231, 1417
PsiI	TTATAA	1 cut(s)	756
Psp6I	CCWGG	3 cut(s)	368, 421, 1276
PspGI	CCWGG	3 cut(s)	368, 421, 1276
PspN4I	GGNNCC	6 cut(s)	186, 303, 460, 1127, 1266, 1282
PspPI	GGNCC	6 cut(s)	40, 61, 301, 458, 575, 1126
PsrI	GAACNNNNNNTAC	2 cut(s)	312, 344
PstNI	CAGNNNCTG	1 cut(s)	882
PsuI	RGATCY	2 cut(s)	1214, 1264
PvuII	CAGCTG	1 cut(s)	882
RsaI	GTAC	1 cut(s)	433
RsaNI	GTAC	1 cut(s)	432
SacII	CCGCGG	1 cut(s)	264
SalI	GTCGAC	1 cut(s)	1171
SapI	GCTCTTC	1 cut(s)	18
SaqAI	TTAA	2 cut(s)	731, 1137
SatI	GCNGC	5 cut(s)	388, 880, 898, 1230, 1416
Sau3AI	GATC	4 cut(s)	279, 706, 1214, 1264
Sau96I	GGNCC	6 cut(s)	40, 61, 301, 458, 575, 1126
ScrFI	CCNGG	4 cut(s)	370, 423, 1278, 1492
SfaNI	GCATC	4 cut(s)	600, 955, 1127, 1382
Sfr303I	CCGCGG	1 cut(s)	264
SfuI	TTCGAA	1 cut(s)	701
SgrBI	CCGCGG	1 cut(s)	264
SinI	GGWCC	6 cut(s)	40, 61, 301, 458, 575, 1126
Sse9I	AATT	7 cut(s)	16, 550, 658, 732, 859, 940, 1022
SsiI	CCGC	6 cut(s)	34, 49, 108, 121, 261, 263
SspMI	CTAG	3 cut(s)	363, 516, 1055
StyD4I	CCNGG	4 cut(s)	368, 421, 1276, 1490
TaaI	ACNGT	8 cut(s)	139, 455, 500, 537, 688, 749, 982, 1450
TaiI	ACGT	3 cut(s)	773, 1172, 1490
TaqI	TCGA	6 cut(s)	192, 227, 282, 701, 1152, 1172
TasI	AATT	7 cut(s)	16, 550, 658, 732, 859, 940, 1022
TatI	WGTACW	1 cut(s)	431
TfiI	GAWTC	3 cut(s)	89, 179, 929
Tru1I	TTAA	2 cut(s)	731, 1137
Tru9I	TTAA	2 cut(s)	731, 1137
TscAI	CASTG	3 cut(s)	460, 540, 720
TseI	GCWGC	5 cut(s)	387, 879, 897, 1229, 1415
TspDTI	ATGAA	4 cut(s)	351, 619, 671, 1349
TspGWI	ACGGA	5 cut(s)	27, 74, 322, 1072, 1344
TspRI	CASTG	3 cut(s)	460, 540, 720
VpaK11BI	GGWCC	6 cut(s)	40, 61, 301, 458, 575, 1126
XapI	RAATTY	3 cut(s)	16, 658, 859
XceI	RCATGY	1 cut(s)	432
XmiI	GTMKAC	2 cut(s)	775, 1172
XspI	CTAG	3 cut(s)	363, 516, 1055
ZraI	GACGTC	1 cut(s)	1488

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.