FvH4_6g50090

RING-type E3 ubiquitin transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0012888
Physical Location & Seq
Forward (+)
37342579 .. 37345984
3406 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g50090.t1

Sequence Viewer

Length: 1671 bp
ATGGAGTTCAAAGAGGGTCTGTTGAGATTAGTTGTCCAGAAATCCAAAGAAACCAATACCATTTACGTCGCCGGAGATAGATTAAATGAGATTACAACCACTGCCCGGAGTCCAAGCCGGAGATGGAAGCTCTTCCACAGATCCTCATCAGCAATCCCATCAAAACCTATTTCAAAGCCACAAATCCCAACAGAGTTCATTTGCCCCATTTCCGGGTCGCTAATGTCCGACCCGGTTATAGTCTCCTCGGGTCACACCTTCGAACGCGTCTGCGTCCAACTCTGCAAAGCCCTCGACTTCACTCCTCATCTCGTGGACTCTCCCCCACCTGATTTCACCTCCATCATCCCAAACCTCGCCTTGAAATCCACCATCATCAACTGGTGTCGAAATTACTCTATTGCCCCTCCGACGCCGCCCGATCCCGTCTCCGCCGAGAAGCTAGTCCGCGCATCCTGCGATCGCCGGAAAGTGTCAGTTTCCGATAACGAGTCGCTGATCCGAGGCGTGGAGGAGACGCCGAAGGTGAACTTCAACCACGCCGCGACGGAGGTGACTCGCCGGAAAACTCACTTCCACTCCAGCTCCGACGAGTCTGTCAGCGCTGCCGCGTTGACCCCGCCGCTTCCGTTCTCGACTCAGCCGAGCTGCTACTCGTCGCGGTCGTCTTCCTCTTCGGAAATCGAAACCCTAACGAATCCGAACGAGGAAGAAGACGGAATCTTGGCCGGACTGAGAAGCACGCACGTGTCGGAGATCGAGGCGGCGCTGACGTCACTGAGGAGGATCACACGGACGAGAGAAGACGCGCGGGCCCACCTCTGCAGCCCACGGCTCCTCTCCGCCTTGAAAACCATCGTTGTTTCCAGGTACATTAATATTCAGGTGAACTCAGTAGCGGCGCTGGTCAACCTTTCTCTCGAAAAGTCAAACAAGATCAAGATCGTACGCTCAGGAATTCTCCCGCCTTTAATTGATGTGCTGAAGGGGGGATCGGCTGAGGCGCAGGAGCACGCTTCCGGGGTGGTCTTCAGCTTGGCGCTGGATGACGACTGCAAGACGGCTATAGGTGTACTAGGGGCTCTCCCGCCTTTGCTTAACTTGCTCAACTCGGAGAGCGAGCGGACTCGGCACGACTCGGCGCTTGGTTTGTATCATTTGACATTGGTGCAGAGCAACCGGTCCAAGTTGGTTAAGCTCGGGGCGGTTCCGGTTCTTTTGAGGATGGTGAAGTCGGGTCATATGGTGGGTCGGGTTTTGCTCATATTGGGGAATTTGAGTTGGTGTGGGGATGGGCGGGCGGCGATGTTGGATTCGGGTGGGGTGGAGTGTTTGGTAGGGGTGTTGAGGGGGAATGAGATGGATTCCCGGTCGAGTCAGGAAAGTTGTGTGGCTGCATTGTATGGGTTGAGTCATGGGGGTTTGAGGTTTAAGGGGTTGGCGAAGGCGGCTGGGGCGGTGGAGGTGTTGAGGGAGGTGGAGAAGAGTGGGAGTGAGAGGGGGAGGGAGAAGGCGAGGAGGATGTTGGAGATGATGAGAGGGAGGGAGAAGGAGGAAGAGGAGGAGGTGGATTGGGAGGAGTTGCTTGATTCCGGGTTGGGAAGTCGAACTAGGTTTCAGCTCGGTTGTGGTGGATTGAGTGGATCTTGTGTCAACTCGTCGGAGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko04934 map04934
Pfam Domains
Protein Families
Arm U-box

Protein Analysis

557

Amino Acids

60.43

Weight (kDa)

8.35

Isoelectric Point (pI)

54.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
U-box PF04564 62 - 130 7.7e-10 U-box domain
ARM_PUB PF25598 252 - 447 2.2e-09 Plant U-box protein ARM repeat region
ARM_ARMC5 PF24768 252 - 414 4.8e-06 ARMC5
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012888)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G40140
fragaria_vesca FvH4_6g50090
malus_domestica MD09G1039200.v1.1 MD17G1040200.v1.1
prunus_persica Prupe.3G278800_v2.0.a1
pyrus_communis pycom111g03090 pycom17g03600
rosa_chinensis RchiOBHm_Chr2g0170361
rosa_laevigata RLG00000021949
rosa_multiflora Rmu_co8477427.1_g000001 Rmu_sc0011601.1_g000012
rosa_roxburghii Rroxscaffold_2G00081400
rosa_rugosa Rorug02G0548500
rosa_samantha Rh2AG619900 Rh2BG630900 Rh2CG600900 Rh2DG643800
rosa_wichuraiana Rw2G051360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 596
AatII GACGTC 1 cut(s) 776
AccBSI CCGCTC 1 cut(s) 1123
AccII CGCG 7 cut(s) 267, 450, 545, 611, 661, 809, 811
AclWI GGATC 6 cut(s) 135, 416, 493, 794, 1000, 1651
AcoI YGGCCR 1 cut(s) 726
AcsI RAATTY 2 cut(s) 957, 1273
AcuI CTGAAG 2 cut(s) 1004, 1015
AcvI CACGTG 1 cut(s) 748
AcyI GRCGYC 3 cut(s) 413, 518, 773
AfaI GTAC 3 cut(s) 872, 948, 1074
AfeI AGCGCT 1 cut(s) 604
AfiI CCNNNNNNNGG 4 cut(s) 105, 212, 213, 508
AflIII ACRYGT 2 cut(s) 265, 747
AgeI ACCGGT 1 cut(s) 1179
AgsI TTSAA 5 cut(s) 10, 174, 364, 535, 850
AjnI CCWGG 1 cut(s) 866
AleI CACNNNNGTG 1 cut(s) 746
AluBI AGCT 7 cut(s) 130, 442, 585, 648, 1035, 1198, 1621
AluI AGCT 7 cut(s) 130, 442, 585, 648, 1035, 1198, 1621
Alw21I GWGCWC 1 cut(s) 1014
Alw26I GTCTC 3 cut(s) 247, 433, 509
AlwI GGATC 6 cut(s) 135, 416, 493, 794, 1000, 1651
Ama87I CYCGRG 2 cut(s) 247, 1199
Aor51HI AGCGCT 1 cut(s) 604
AoxI GGCC 2 cut(s) 726, 813
ApaI GGGCCC 1 cut(s) 817
ApeKI GCWGC 4 cut(s) 605, 648, 825, 1394
ApoI RAATTY 2 cut(s) 957, 1273
AseI ATTAAT 1 cut(s) 876
AsiGI ACCGGT 1 cut(s) 1179
AsiSI GCGATCGC 1 cut(s) 463
Asp700I GAANNNNTTC 1 cut(s) 131
AspLEI GCGC 8 cut(s) 452, 605, 769, 811, 904, 1006, 1042, 1144
AspS9I GGNCC 3 cut(s) 813, 814, 1182
AsuC2I CCSGG 6 cut(s) 106, 214, 233, 1021, 1369, 1594
AsuHPI GGTGA 5 cut(s) 328, 538, 565, 898, 1240
AsuII TTCGAA 1 cut(s) 261
AvaI CYCGRG 2 cut(s) 247, 1199
AvaII GGWCC 1 cut(s) 1182
BaeGI GKGCMC 1 cut(s) 817
BanII GRGCYC 2 cut(s) 817, 1084
BauI CACGAG 1 cut(s) 311
BbrPI CACGTG 1 cut(s) 748
BbsI GAAGAC 4 cut(s) 660, 720, 810, 1021
Bbv12I GWGCWC 1 cut(s) 1014
BbvCI CCTCAGC 1 cut(s) 999
BbvI GCAGC 4 cut(s) 592, 635, 837, 1381
BccI CCATC 8 cut(s) 117, 166, 350, 380, 863, 1219, 1286, 1354
BceAI ACGGC 2 cut(s) 848, 1077
BcgI CGANNNNNNTGC 2 cut(s) 274, 308
BciT130I CCWGG 1 cut(s) 868
BcnI CCSGG 6 cut(s) 106, 214, 233, 1021, 1369, 1594
BcoDI GTCTC 3 cut(s) 247, 433, 509
BfaI CTAG 3 cut(s) 443, 1076, 1611
BfmI CTRYAG 2 cut(s) 823, 1065
BfoI RGCGCY 5 cut(s) 606, 770, 905, 1043, 1145
Bme1390I CCNGG 7 cut(s) 106, 214, 233, 868, 1021, 1369, 1594
Bme18I GGWCC 1 cut(s) 1182
BmeT110I CYCGRG 2 cut(s) 247, 1199
BmgT120I GGNCC 3 cut(s) 813, 814, 1182
BmiI GGNNCC 3 cut(s) 815, 836, 1209
BmrFI CCNGG 7 cut(s) 106, 214, 233, 868, 1021, 1369, 1594
BmsI GCATC 1 cut(s) 461
BpiI GAAGAC 4 cut(s) 660, 720, 810, 1021
BpmI CTGGAG 1 cut(s) 565
Bpu10I CCTNAGC 2 cut(s) 952, 999
Bpu14I TTCGAA 1 cut(s) 261
BpuMI CCSGG 6 cut(s) 106, 214, 233, 1021, 1369, 1594
BsaAI YACGTR 1 cut(s) 748
BsaBI GATNNNNATC 2 cut(s) 145, 941
BsaHI GRCGYC 3 cut(s) 413, 518, 773
BsaJI CCNNGG 4 cut(s) 246, 502, 830, 1020
BsaWI WCCGGW 2 cut(s) 1179, 1210
BsaXI ACNNNNNCTCC 4 cut(s) 563, 569, 593, 599
Bsc4I CCNNNNNNNGG 4 cut(s) 105, 212, 213, 508
Bse118I RCCGGY 1 cut(s) 1179
Bse1I ACTGG 1 cut(s) 386
Bse8I GATNNNNATC 2 cut(s) 145, 941
BseBI CCWGG 1 cut(s) 868
BseDI CCNNGG 4 cut(s) 246, 502, 830, 1020
BseGI GGATG 6 cut(s) 345, 452, 1051, 1230, 1297, 1527
BseJI GATNNNNATC 2 cut(s) 145, 941
BseLI CCNNNNNNNGG 4 cut(s) 105, 212, 213, 508
BseMII CTCAG 6 cut(s) 653, 725, 770, 906, 966, 990
BseNI ACTGG 1 cut(s) 386
BseRI GAGGAG 9 cut(s) 235, 294, 527, 796, 827, 1531, 1574, 1577, 1592
BseSI GKGCMC 1 cut(s) 817
BseXI GCAGC 4 cut(s) 592, 635, 837, 1381
BseYI CCCAGC 1 cut(s) 1451
BsgI GTGCAG 1 cut(s) 1190
Bsh1236I CGCG 7 cut(s) 267, 450, 545, 611, 661, 809, 811
Bsh1285I CGRYCG 3 cut(s) 463, 665, 1373
BshFI GGCC 2 cut(s) 728, 815
BshTI ACCGGT 1 cut(s) 1179
BsiEI CGRYCG 3 cut(s) 463, 665, 1373
BsiHKAI GWGCWC 1 cut(s) 1014
BsiHKCI CYCGRG 2 cut(s) 247, 1199
BsiWI CGTACG 1 cut(s) 946
BslI CCNNNNNNNGG 4 cut(s) 105, 212, 213, 508
BsmAI GTCTC 3 cut(s) 247, 433, 509
BsmBI CGTCTC 2 cut(s) 433, 509
BsnI GGCC 2 cut(s) 728, 815
BsoBI CYCGRG 2 cut(s) 247, 1199
Bsp119I TTCGAA 1 cut(s) 261
Bsp120I GGGCCC 1 cut(s) 813
Bsp1286I GDGCHC 3 cut(s) 817, 1014, 1084
BspANI GGCC 2 cut(s) 728, 815
BspCNI CTCAG 6 cut(s) 652, 726, 771, 905, 965, 991
BspFNI CGCG 7 cut(s) 267, 450, 545, 611, 661, 809, 811
BspLI GGNNCC 3 cut(s) 815, 836, 1209
BspMAI CTGCAG 1 cut(s) 827
BspPI GGATC 6 cut(s) 135, 416, 493, 794, 1000, 1651
BspQI GCTCTTC 1 cut(s) 137
BspT104I TTCGAA 1 cut(s) 261
BsrBI CCGCTC 1 cut(s) 1123
BsrFI RCCGGY 1 cut(s) 1179
BsrI ACTGG 1 cut(s) 386
BssAI RCCGGY 1 cut(s) 1179
BssECI CCNNGG 4 cut(s) 246, 502, 830, 1020
BssNI GRCGYC 3 cut(s) 413, 518, 773
BssSI CACGAG 1 cut(s) 311
Bst2BI CACGAG 1 cut(s) 311
Bst2UI CCWGG 1 cut(s) 868
Bst6I CTCTTC 4 cut(s) 137, 679, 1478, 1551
BstACI GRCGYC 3 cut(s) 413, 518, 773
BstBAI YACGTR 1 cut(s) 748
BstBI TTCGAA 1 cut(s) 261
BstC8I GCNNGC 5 cut(s) 743, 813, 1014, 1121, 1299
BstDEI CTNAG 6 cut(s) 639, 734, 779, 892, 952, 999
BstDSI CCRYGG 1 cut(s) 830
BstF5I GGATG 6 cut(s) 345, 452, 1051, 1230, 1297, 1527
BstFNI CGCG 7 cut(s) 267, 450, 545, 611, 661, 809, 811
BstH2I RGCGCY 5 cut(s) 606, 770, 905, 1043, 1145
BstHHI GCGC 8 cut(s) 452, 605, 769, 811, 904, 1006, 1042, 1144
BstMAI GTCTC 3 cut(s) 247, 433, 509
BstMCI CGRYCG 3 cut(s) 463, 665, 1373
BstMWI GCNNNNNNNGC 5 cut(s) 456, 1102, 1129, 1448, 1454
BstNI CCWGG 1 cut(s) 868
BstSCI CCNGG 7 cut(s) 104, 212, 231, 866, 1019, 1367, 1592
BstSFI CTRYAG 2 cut(s) 823, 1065
BstSLI GKGCMC 1 cut(s) 817
BstUI CGCG 7 cut(s) 267, 450, 545, 611, 661, 809, 811
BstV1I GCAGC 4 cut(s) 592, 635, 837, 1381
BstV2I GAAGAC 4 cut(s) 660, 720, 810, 1021
BstX2I RGATCY 2 cut(s) 140, 1643
BstYI RGATCY 2 cut(s) 140, 1643
BsuRI GGCC 2 cut(s) 728, 815
BtgI CCRYGG 1 cut(s) 830
BtgZI GCGATG 1 cut(s) 1319
BtsCI GGATG 6 cut(s) 345, 452, 1051, 1230, 1297, 1527
BtsI GCAGTG 1 cut(s) 99
BtsIMutI CAGTG 2 cut(s) 99, 776
Cac8I GCNNGC 5 cut(s) 743, 813, 1014, 1121, 1299
CfoI GCGC 8 cut(s) 452, 605, 769, 811, 904, 1006, 1042, 1144
Cfr10I RCCGGY 1 cut(s) 1179
Cfr13I GGNCC 3 cut(s) 813, 814, 1182
CseI GACGC 5 cut(s) 256, 262, 421, 526, 815
Csp6I GTAC 3 cut(s) 871, 947, 1073
CspAI ACCGGT 1 cut(s) 1179
CviAII CATG 1 cut(s) 1415
CviQI GTAC 3 cut(s) 871, 947, 1073
DdeI CTNAG 6 cut(s) 639, 734, 779, 892, 952, 999
DrdI GACNNNNNNGTC 1 cut(s) 596
DseDI GACNNNNNNGTC 1 cut(s) 596
EaeI YGGCCR 1 cut(s) 726
Eam1104I CTCTTC 4 cut(s) 137, 679, 1478, 1551
EarI CTCTTC 4 cut(s) 137, 679, 1478, 1551
EciI GGCGGA 2 cut(s) 421, 832
Eco24I GRGCYC 2 cut(s) 817, 1084
Eco47I GGWCC 1 cut(s) 1182
Eco47III AGCGCT 1 cut(s) 604
Eco57I CTGAAG 2 cut(s) 1004, 1015
Eco72I CACGTG 1 cut(s) 748
Eco88I CYCGRG 2 cut(s) 247, 1199
EcoRI GAATTC 1 cut(s) 957
EcoRII CCWGG 1 cut(s) 866
EcoT38I GRGCYC 2 cut(s) 817, 1084
Esp3I CGTCTC 2 cut(s) 433, 509
FaeI CATG 1 cut(s) 1418
FaiI YATR 7 cut(s) 239, 1067, 1242, 1244, 1265, 1404, 1416
FalI AAGNNNNNCTT 2 cut(s) 515, 547
FatI CATG 1 cut(s) 1414
FauI CCCGC 5 cut(s) 627, 804, 972, 1095, 1290
FauNDI CATATG 1 cut(s) 1242
FokI GGATG 6 cut(s) 332, 439, 1058, 1237, 1304, 1534
FriOI GRGCYC 2 cut(s) 817, 1084
FspBI CTAG 3 cut(s) 443, 1076, 1611
GlaI GCGC 8 cut(s) 451, 604, 768, 810, 903, 1005, 1041, 1143
GsaI CCCAGC 1 cut(s) 1455
GsuI CTGGAG 1 cut(s) 565
HaeII RGCGCY 5 cut(s) 606, 770, 905, 1043, 1145
HaeIII GGCC 2 cut(s) 728, 815
HgaI GACGC 5 cut(s) 256, 262, 421, 526, 815
HhaI GCGC 8 cut(s) 452, 605, 769, 811, 904, 1006, 1042, 1144
Hin1I GRCGYC 3 cut(s) 413, 518, 773
Hin1II CATG 1 cut(s) 1418
Hin6I GCGC 8 cut(s) 450, 603, 767, 809, 902, 1004, 1040, 1142
HinP1I GCGC 8 cut(s) 450, 603, 767, 809, 902, 1004, 1040, 1142
HincII GTYRAC 3 cut(s) 615, 910, 1654
HindII GTYRAC 3 cut(s) 615, 910, 1654
HphI GGTGA 5 cut(s) 328, 538, 565, 898, 1240
Hpy166II GTNNAC 7 cut(s) 316, 529, 615, 889, 910, 1073, 1654
Hpy188III TCNNGA 6 cut(s) 37, 634, 920, 940, 954, 1379
Hpy8I GTNNAC 7 cut(s) 316, 529, 615, 889, 910, 1073, 1654
Hpy99I CGWCG 6 cut(s) 71, 415, 550, 593, 661, 1663
HpyAV CCTTC 6 cut(s) 268, 517, 979, 1438, 1504, 1543
HpyCH4IV ACGT 3 cut(s) 66, 747, 773
HpyCH4V TGCA 5 cut(s) 285, 825, 1056, 1171, 1397
HpyF10VI GCNNNNNNNGC 5 cut(s) 456, 1102, 1129, 1448, 1454
HpyF3I CTNAG 6 cut(s) 639, 734, 779, 892, 952, 999
HpySE526I ACGT 3 cut(s) 66, 747, 773
Hsp92I GRCGYC 3 cut(s) 413, 518, 773
Hsp92II CATG 1 cut(s) 1418
HspAI GCGC 8 cut(s) 450, 603, 767, 809, 902, 1004, 1040, 1142
LguI GCTCTTC 1 cut(s) 137
LmnI GCTCC 3 cut(s) 590, 840, 1009
Lsp1109I GCAGC 4 cut(s) 592, 635, 837, 1381
LweI GCATC 1 cut(s) 461
MaeI CTAG 3 cut(s) 443, 1076, 1611
MaeII ACGT 3 cut(s) 66, 747, 773
MaeIII GTNAC 3 cut(s) 251, 553, 774
MbiI CCGCTC 1 cut(s) 1123
MboII GAAGA 9 cut(s) 124, 660, 666, 722, 725, 815, 1021, 1495, 1568
MflI RGATCY 2 cut(s) 140, 1643
MhlI GDGCHC 3 cut(s) 817, 1014, 1084
MluCI AATT 4 cut(s) 391, 957, 972, 1273
MluI ACGCGT 1 cut(s) 265
MmeI TCCRAC 8 cut(s) 252, 301, 434, 612, 732, 1290, 1506, 1641
MroXI GAANNNNTTC 1 cut(s) 131
MseI TTAA 6 cut(s) 83, 876, 971, 1098, 1194, 1431
MslI CAYNNNNRTG 1 cut(s) 746
MspR9I CCNGG 7 cut(s) 106, 214, 233, 868, 1021, 1369, 1594
MvaI CCWGG 1 cut(s) 868
MvnI CGCG 7 cut(s) 267, 450, 545, 611, 661, 809, 811
MwoI GCNNNNNNNGC 5 cut(s) 456, 1102, 1129, 1448, 1454
NciI CCSGG 6 cut(s) 106, 214, 233, 1021, 1369, 1594
NdeI CATATG 1 cut(s) 1242
NlaIII CATG 1 cut(s) 1418
NlaIV GGNNCC 3 cut(s) 815, 836, 1209
NmeAIII GCCGAG 4 cut(s) 460, 669, 1108, 1118
NmuCI GTSAC 3 cut(s) 251, 553, 774
NspV TTCGAA 1 cut(s) 261
OliI CACNNNNGTG 1 cut(s) 746
PciSI GCTCTTC 1 cut(s) 137
PcsI WCGNNNNNNNCGW 2 cut(s) 641, 662
PdmI GAANNNNTTC 1 cut(s) 131
PfeI GAWTC 5 cut(s) 697, 720, 1313, 1364, 1589
Pfl23II CGTACG 1 cut(s) 946
PinAI ACCGGT 1 cut(s) 1179
Ple19I CGATCG 1 cut(s) 463
PmaCI CACGTG 1 cut(s) 748
PmlI CACGTG 1 cut(s) 748
Ppu21I YACGTR 1 cut(s) 748
PshBI ATTAAT 1 cut(s) 876
Psp6I CCWGG 1 cut(s) 866
PspCI CACGTG 1 cut(s) 748
PspFI CCCAGC 1 cut(s) 1451
PspGI CCWGG 1 cut(s) 866
PspLI CGTACG 1 cut(s) 946
PspN4I GGNNCC 3 cut(s) 815, 836, 1209
PspOMI GGGCCC 1 cut(s) 813
PspPI GGNCC 3 cut(s) 813, 814, 1182
PstI CTGCAG 1 cut(s) 827
PsuI RGATCY 2 cut(s) 140, 1643
PvuI CGATCG 1 cut(s) 463
RgaI GCGATCGC 1 cut(s) 463
RsaI GTAC 3 cut(s) 872, 948, 1074
RsaNI GTAC 3 cut(s) 871, 947, 1073
RseI CAYNNNNRTG 1 cut(s) 746
SapI GCTCTTC 1 cut(s) 137
SaqAI TTAA 6 cut(s) 83, 876, 971, 1098, 1194, 1431
Sau96I GGNCC 3 cut(s) 813, 814, 1182
ScrFI CCNGG 7 cut(s) 106, 214, 233, 868, 1021, 1369, 1594
SduI GDGCHC 3 cut(s) 817, 1014, 1084
SfaAI GCGATCGC 1 cut(s) 463
SfaNI GCATC 1 cut(s) 461
SfcI CTRYAG 2 cut(s) 823, 1065
SfuI TTCGAA 1 cut(s) 261
SgfI GCGATCGC 1 cut(s) 463
SinI GGWCC 1 cut(s) 1182
SmiMI CAYNNNNRTG 1 cut(s) 746
Sse9I AATT 4 cut(s) 391, 957, 972, 1273
SspI AATATT 1 cut(s) 880
SspMI CTAG 3 cut(s) 443, 1076, 1611
StyD4I CCNGG 7 cut(s) 104, 212, 231, 866, 1019, 1367, 1592
TaiI ACGT 3 cut(s) 69, 750, 776
TaqI TCGA 9 cut(s) 261, 294, 388, 635, 684, 759, 921, 1373, 1606
TasI AATT 4 cut(s) 391, 957, 972, 1273
TatI WGTACW 1 cut(s) 1072
TauI GCSGC 8 cut(s) 418, 545, 611, 625, 767, 902, 1304, 1451
TfiI GAWTC 5 cut(s) 697, 720, 1313, 1364, 1589
Tru1I TTAA 6 cut(s) 83, 876, 971, 1098, 1194, 1431
Tru9I TTAA 6 cut(s) 83, 876, 971, 1098, 1194, 1431
TscAI CASTG 2 cut(s) 106, 783
TseFI GTSAC 3 cut(s) 251, 553, 774
TseI GCWGC 4 cut(s) 605, 648, 825, 1394
Tsp45I GTSAC 3 cut(s) 251, 553, 774
TspDTI ATGAA 1 cut(s) 187
TspGWI ACGGA 4 cut(s) 563, 618, 732, 808
TspRI CASTG 2 cut(s) 106, 783
VpaK11BI GGWCC 1 cut(s) 1182
VspI ATTAAT 1 cut(s) 876
XapI RAATTY 2 cut(s) 957, 1273
XcmI CCANNNNNNNNNTGG 1 cut(s) 120
XmnI GAANNNNTTC 1 cut(s) 131
XspI CTAG 3 cut(s) 443, 1076, 1611
ZraI GACGTC 1 cut(s) 774
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.