RING-type E3 ubiquitin transferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G40140 |
| fragaria_vesca | FvH4_6g50090 |
| malus_domestica | MD09G1039200.v1.1 MD17G1040200.v1.1 |
| prunus_persica | Prupe.3G278800_v2.0.a1 |
| pyrus_communis | pycom111g03090 pycom17g03600 |
| rosa_chinensis | RchiOBHm_Chr2g0170361 |
| rosa_laevigata | RLG00000021949 |
| rosa_multiflora | Rmu_co8477427.1_g000001 Rmu_sc0011601.1_g000012 |
| rosa_roxburghii | Rroxscaffold_2G00081400 |
| rosa_rugosa | Rorug02G0548500 |
| rosa_samantha | Rh2AG619900 Rh2BG630900 Rh2CG600900 Rh2DG643800 |
| rosa_wichuraiana | Rw2G051360 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 14 |
| AcoI | YGGCCR | 1 cut(s) | 15 |
| AcuI | CTGAAG | 1 cut(s) | 167 |
| Ama87I | CYCGRG | 1 cut(s) | 157 |
| AoxI | GGCC | 1 cut(s) | 15 |
| AvaI | CYCGRG | 1 cut(s) | 157 |
| BfaI | CTAG | 1 cut(s) | 177 |
| BisI | GCNGC | 1 cut(s) | 15 |
| BlsI | GCNGC | 1 cut(s) | 16 |
| BmeT110I | CYCGRG | 1 cut(s) | 157 |
| BsaJI | CCNNGG | 1 cut(s) | 18 |
| BsaWI | WCCGGW | 1 cut(s) | 188 |
| BseDI | CCNNGG | 1 cut(s) | 18 |
| BseGI | GGATG | 1 cut(s) | 93 |
| BseRI | GAGGAG | 5 cut(s) | 97, 134, 137, 140, 158 |
| BseX3I | CGGCCG | 1 cut(s) | 15 |
| Bsh1285I | CGRYCG | 1 cut(s) | 18 |
| BshFI | GGCC | 1 cut(s) | 17 |
| BsiEI | CGRYCG | 1 cut(s) | 18 |
| BsiHKCI | CYCGRG | 1 cut(s) | 157 |
| BsiSI | CCGG | 1 cut(s) | 189 |
| BsnI | GGCC | 1 cut(s) | 17 |
| BsoBI | CYCGRG | 1 cut(s) | 157 |
| BspACI | CCGC | 1 cut(s) | 14 |
| BspANI | GGCC | 1 cut(s) | 17 |
| BssECI | CCNNGG | 1 cut(s) | 18 |
| Bst6I | CTCTTC | 1 cut(s) | 44 |
| BstC8I | GCNNGC | 1 cut(s) | 6 |
| BstF5I | GGATG | 1 cut(s) | 93 |
| BstMCI | CGRYCG | 1 cut(s) | 18 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 14, 20 |
| BstZI | CGGCCG | 1 cut(s) | 15 |
| BsuRI | GGCC | 1 cut(s) | 17 |
| BtsCI | GGATG | 1 cut(s) | 93 |
| BtsI | GCAGTG | 1 cut(s) | 30 |
| BtsIMutI | CAGTG | 1 cut(s) | 30 |
| Cac8I | GCNNGC | 1 cut(s) | 6 |
| CviJI | RGCY | 3 cut(s) | 4, 17, 181 |
| CviKI_1 | RGCY | 3 cut(s) | 4, 17, 181 |
| EaeI | YGGCCR | 1 cut(s) | 15 |
| EagI | CGGCCG | 1 cut(s) | 15 |
| Eam1104I | CTCTTC | 1 cut(s) | 44 |
| EarI | CTCTTC | 1 cut(s) | 44 |
| EclXI | CGGCCG | 1 cut(s) | 15 |
| Eco52I | CGGCCG | 1 cut(s) | 15 |
| Eco57I | CTGAAG | 1 cut(s) | 167 |
| Eco88I | CYCGRG | 1 cut(s) | 157 |
| Fnu4HI | GCNGC | 1 cut(s) | 15 |
| FokI | GGATG | 1 cut(s) | 100 |
| Fsp4HI | GCNGC | 1 cut(s) | 15 |
| FspBI | CTAG | 1 cut(s) | 177 |
| GluI | GCNGC | 1 cut(s) | 15 |
| HaeIII | GGCC | 1 cut(s) | 17 |
| HapII | CCGG | 1 cut(s) | 189 |
| HinfI | GANTC | 1 cut(s) | 155 |
| HpaII | CCGG | 1 cut(s) | 189 |
| Hpy188I | TCNGA | 1 cut(s) | 229 |
| HpyAV | CCTTC | 3 cut(s) | 4, 70, 109 |
| HpyCH4V | TGCA | 1 cut(s) | 200 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 14, 20 |
| LpnPI | CCDG | 1 cut(s) | 202 |
| MaeI | CTAG | 1 cut(s) | 177 |
| MboII | GAAGA | 1 cut(s) | 61 |
| MluCI | AATT | 1 cut(s) | 220 |
| MlyI | GAGTC | 1 cut(s) | 149 |
| MmeI | TCCRAC | 1 cut(s) | 72 |
| MseI | TTAA | 1 cut(s) | 219 |
| MspI | CCGG | 1 cut(s) | 189 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 14, 20 |
| NmeAIII | GCCGAG | 1 cut(s) | 43 |
| PkrI | GCNGC | 1 cut(s) | 16 |
| PleI | GAGTC | 1 cut(s) | 149 |
| PpsI | GAGTC | 1 cut(s) | 149 |
| SaqAI | TTAA | 1 cut(s) | 219 |
| SatI | GCNGC | 1 cut(s) | 15 |
| SchI | GAGTC | 1 cut(s) | 149 |
| SetI | ASST | 1 cut(s) | 33 |
| SgeI | CNNG | 9 cut(s) | 17, 31, 93, 164, 169, 171, 189, 201, 225 |
| Sse9I | AATT | 1 cut(s) | 220 |
| SsiI | CCGC | 1 cut(s) | 14 |
| SspMI | CTAG | 1 cut(s) | 177 |
| TaqI | TCGA | 1 cut(s) | 172 |
| TasI | AATT | 1 cut(s) | 220 |
| TauI | GCSGC | 1 cut(s) | 17 |
| Tru1I | TTAA | 1 cut(s) | 219 |
| Tru9I | TTAA | 1 cut(s) | 219 |
| TscAI | CASTG | 1 cut(s) | 30 |
| TspRI | CASTG | 1 cut(s) | 30 |
| XspI | CTAG | 1 cut(s) | 177 |