Prupe.3G278800_v2.0.a1

RING-type E3 ubiquitin transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0012888
Physical Location & Seq
Forward (+)
25551839 .. 25554750
2912 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G278800.1

Sequence Viewer

Length: 1698 bp
ATGGAGTTTCAGGAGGCTGTCATGAAGTTGATGATCCACAAAGCCAAAGAAAACGAATGGGCTTTCCAAACCCCTGACAGAGTGACAGAGATAAGCAGTCCCAGCCCCAGGCGCAAATGGAAGCTTTTCAACAGGTCCTCATCGGCCATCCCATCAAAAACTGCAAAGGCCCAAGCTCCAAAAGAGTTCATTTGCCCCATCTCTGGTTCTCTAATGGCTGACCCAGTCATCGTCTCCTCAGGCCACACCTTCGAGCGTGCCTGCGTCCAAGTCTGCAAATCCCTCAACTTCACACCCACTCTCGTGGACTCTCCCCCACCCGATTTCTCCTCTGTAATCTCCAACCTCGCTCTCAAATCCGCCATTCTCAACTGGTGCCGCAAGTCCTCCATAGACCCTCCCAAGCCCCTCGATTTCAGTTCCGCCGATCAGCTCGTCCGTGCGTTCGTGGCGTCCCAGAACCAAACCCTACCCCAGAAGCTCGTAATTTCGGAGAACGAGTTGTTGATCCAAGGCGTCAACGAAACCCCTAAAGTGAATTTCAATCACGCGGCCACCGAGGTGACTCGGCGTCCGACTCACTTCCACTCGAGCTCCGACGAATCGGTCACTGCGCTCGTGTCGACTCCGCCTCTGCCCTTCTCGACGCAGCCGAGTTGCTACTCTTCCTGTTCGTCTTCCTCCTCCGAAATTGAAACCCTAAACCCGGGCAACAGCAATTCATCCTCCCGCTCCGTAGAAGACGACGAAATCTTGATCAAGCTCAGAAGCCAACACGTGTTCGAAATCGAGGACGCTCTGGCCTCGCTGAGGAAGATCACGCGAACCAGAGAGGACACTCGGGCCAGCCTCTGCACCCCTCGGATGCTCTCCGCCCTGCGACCTCTGATCGTGTCCAGGTACACCGGCGTTCAGGTGAACTCGGTCGCAGCGTTGGTCAATTTGTCGTTGGAAAAGTCAAACAAGATTAAGATCGTACGGTCAGGAGTTCTCCCTCCATTGATTGATGTGCTTAAGGCAGGATCCCCTGAGGCGCAGGAACACGCTTCCGGTGCACTCTTTAGCTTGGCGCTTGATGACGATTGTAAGACCGCCATTGGCGTTTTGGGTGCCTTGCCACCTTTGCTTCACTTACTCCGATCCGAGAGCGAGCGGACTCGGCATGACTCGGCACTCGCTTTGTATCACCTCACACTCGTTCAGAGTAACCGCTCCAAATTGGTTAAACTCGGGTCGGTTCCGATTCTTTTGAGAATGGTGAAGTCAGGTCATATGACGGGTCGGGTACTACTCACATTGTGCAACTTGAGTTCTTGCGCGGACGGGCGGGCATCGATGTTGGATGCGGGTGGGGTGGAATGTTTGTTGGGTGTCTTGAGAGGAAATGAGTTTGACTCGAAGGCAACTCAGGAGAGTTGTGTGGCCACATTGTGTGGGCTGAGTTATGGTGGTTTGAGGTTTAAGGGGTTGGCCAAGGTGGCCGGGGCGATTGAGGTGTTAAGAGAGGTGGAGAAAAAGGGAAGCGACCGGGCGAGGGAGAAAGCAAGGAGGATGTTGGAGATGATGAGAGGGAAAGAGGAGGAGGAAGAAGATGAAGTGGATTGGGAGGAGTTGCTCAACTCGGGGCTCGGAAGTCGAAATCGGAGTCAACTCAGTGGTGGATTAGGCGGGTCAAGTGTCAACTCGTCCGAATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko04934 map04934
Pfam Domains
Protein Families
Arm U-box

Protein Analysis

566

Amino Acids

61.47

Weight (kDa)

8.16

Isoelectric Point (pI)

52.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012888)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G40140
fragaria_vesca FvH4_6g50090
malus_domestica MD09G1039200.v1.1 MD17G1040200.v1.1
prunus_persica Prupe.3G278800_v2.0.a1
pyrus_communis pycom111g03090 pycom17g03600
rosa_chinensis RchiOBHm_Chr2g0170361
rosa_laevigata RLG00000021949
rosa_multiflora Rmu_co8477427.1_g000001 Rmu_sc0011601.1_g000012
rosa_roxburghii Rroxscaffold_2G00081400
rosa_rugosa Rorug02G0548500
rosa_samantha Rh2AG619900 Rh2BG630900 Rh2CG600900 Rh2DG643800
rosa_wichuraiana Rw2G051360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 605
AccB1I GGYRCC 2 cut(s) 375, 1109
AccBSI CCGCTC 3 cut(s) 732, 1153, 1212
AccI GTMKAC 1 cut(s) 623
AccII CGCG 3 cut(s) 551, 823, 1319
AclWI GGATC 5 cut(s) 28, 502, 1017, 1030, 1134
AcoI YGGCCR 5 cut(s) 144, 552, 1422, 1470, 1479
AcsI RAATTY 2 cut(s) 538, 1691
AcvI CACGTG 1 cut(s) 778
AcyI GRCGYC 3 cut(s) 452, 516, 571
AdeI CACNNNGTG 2 cut(s) 1299, 1431
AfaI GTAC 3 cut(s) 902, 978, 1287
AfiI CCNNNNNNNGG 5 cut(s) 108, 203, 706, 810, 1534
AflII CTTAAG 1 cut(s) 1013
AflIII ACRYGT 2 cut(s) 775, 777
AgsI TTSAA 3 cut(s) 130, 544, 695
AhdI GACNNNNNGTC 1 cut(s) 570
AjnI CCWGG 2 cut(s) 107, 896
AleI CACNNNNGTG 2 cut(s) 302, 560
AluBI AGCT 7 cut(s) 124, 176, 433, 481, 594, 763, 1065
AluI AGCT 7 cut(s) 124, 176, 433, 481, 594, 763, 1065
Alw21I GWGCWC 2 cut(s) 596, 1057
Alw26I GTCTC 1 cut(s) 238
Alw44I GTGCAC 1 cut(s) 1053
AlwI GGATC 5 cut(s) 28, 502, 1017, 1030, 1134
AlwNI CAGNNNCTG 1 cut(s) 852
Ama87I CYCGRG 5 cut(s) 589, 706, 840, 1229, 1621
AoxI GGCC 9 cut(s) 144, 168, 241, 552, 801, 843, 1422, 1470, 1479
ApaLI GTGCAC 1 cut(s) 1053
ApeKI GCWGC 2 cut(s) 649, 929
ApoI RAATTY 2 cut(s) 538, 1691
ArsI GACNNNNNNTTYG 2 cut(s) 1630, 1662
Asp700I GAANNNNTTC 1 cut(s) 125
AspLEI GCGC 5 cut(s) 114, 616, 1036, 1072, 1319
AspS9I GGNCC 3 cut(s) 135, 169, 843
AsuC2I CCSGG 4 cut(s) 707, 708, 1483, 1529
AsuHPI GGTGA 4 cut(s) 574, 928, 1178, 1270
AsuII TTCGAA 1 cut(s) 783
AvaI CYCGRG 5 cut(s) 589, 706, 840, 1229, 1621
AvaII GGWCC 1 cut(s) 135
AxyI CCTNAGG 2 cut(s) 238, 1029
BaeGI GKGCMC 1 cut(s) 1057
BalI TGGCCA 2 cut(s) 1424, 1472
BamHI GGATCC 1 cut(s) 1022
BanI GGYRCC 2 cut(s) 375, 1109
BanII GRGCYC 2 cut(s) 596, 1629
BauI CACGAG 2 cut(s) 302, 617
BbrPI CACGTG 1 cut(s) 778
BbsI GAAGAC 2 cut(s) 669, 747
Bbv12I GWGCWC 2 cut(s) 596, 1057
BbvCI CCTCAGC 1 cut(s) 809
BbvI GCAGC 2 cut(s) 661, 941
BccI CCATC 3 cut(s) 155, 160, 206
BciT130I CCWGG 2 cut(s) 109, 898
BclI TGATCA 1 cut(s) 756
BcnI CCSGG 4 cut(s) 707, 708, 1483, 1529
BcoDI GTCTC 1 cut(s) 238
BfoI RGCGCY 1 cut(s) 1073
BfrI CTTAAG 1 cut(s) 1013
BglI GCCNNNNNGGC 1 cut(s) 1478
BisI GCNGC 4 cut(s) 379, 552, 650, 930
BlsI GCNGC 4 cut(s) 380, 553, 651, 931
Bme1390I CCNGG 6 cut(s) 109, 707, 708, 898, 1483, 1529
Bme18I GGWCC 1 cut(s) 135
BmeRI GACNNNNNGTC 1 cut(s) 570
BmeT110I CYCGRG 5 cut(s) 589, 706, 840, 1229, 1621
BmgT120I GGNCC 3 cut(s) 135, 169, 843
BmiI GGNNCC 4 cut(s) 377, 1024, 1111, 1239
BmrFI CCNGG 6 cut(s) 109, 707, 708, 898, 1483, 1529
BmrI ACTGGG 1 cut(s) 218
BmsI GCATC 3 cut(s) 855, 1333, 1340
BmuI ACTGGG 1 cut(s) 218
BpiI GAAGAC 2 cut(s) 669, 747
BplI GAGNNNNNCTC 2 cut(s) 1379, 1411
Bpu10I CCTNAGC 1 cut(s) 809
Bpu14I TTCGAA 1 cut(s) 783
BpuEI CTTGAG 2 cut(s) 1327, 1396
BpuMI CCSGG 4 cut(s) 707, 708, 1483, 1529
Bsa29I ATCGAT 1 cut(s) 1334
BsaAI YACGTR 1 cut(s) 778
BsaBI GATNNNNATC 1 cut(s) 971
BsaHI GRCGYC 3 cut(s) 452, 516, 571
BsaJI CCNNGG 7 cut(s) 107, 511, 558, 706, 860, 1473, 1482
BsaWI WCCGGW 1 cut(s) 1049
BsaXI ACNNNNNCTCC 4 cut(s) 485, 515, 578, 608
Bsc4I CCNNNNNNNGG 5 cut(s) 108, 203, 706, 810, 1534
Bse118I RCCGGY 1 cut(s) 905
Bse1I ACTGG 2 cut(s) 224, 377
Bse21I CCTNAGG 2 cut(s) 238, 1029
Bse8I GATNNNNATC 1 cut(s) 971
BseBI CCWGG 2 cut(s) 109, 898
BseCI ATCGAT 1 cut(s) 1334
BseDI CCNNGG 7 cut(s) 107, 511, 558, 706, 860, 1473, 1482
BseGI GGATG 5 cut(s) 147, 722, 870, 1348, 1557
BseJI GATNNNNATC 1 cut(s) 971
BseLI CCNNNNNNNGG 5 cut(s) 108, 203, 706, 810, 1534
BseMII CTCAG 7 cut(s) 252, 778, 800, 1020, 1421, 1430, 1666
BseNI ACTGG 2 cut(s) 224, 377
BseRI GAGGAG 6 cut(s) 226, 319, 673, 1592, 1595, 1622
BseSI GKGCMC 1 cut(s) 1057
BseXI GCAGC 2 cut(s) 661, 941
BseYI CCCAGC 1 cut(s) 101
BsgI GTGCAG 1 cut(s) 838
Bsh1236I CGCG 3 cut(s) 551, 823, 1319
Bsh1285I CGRYCG 2 cut(s) 927, 1528
BshFI GGCC 9 cut(s) 146, 170, 243, 554, 803, 845, 1424, 1472, 1481
BshNI GGYRCC 2 cut(s) 375, 1109
BshVI ATCGAT 1 cut(s) 1334
BsiEI CGRYCG 2 cut(s) 927, 1528
BsiHKAI GWGCWC 2 cut(s) 596, 1057
BsiHKCI CYCGRG 5 cut(s) 589, 706, 840, 1229, 1621
BsiSI CCGG 5 cut(s) 707, 906, 1050, 1482, 1528
BsiWI CGTACG 1 cut(s) 976
BslFI GGGAC 2 cut(s) 84, 439
BslI CCNNNNNNNGG 5 cut(s) 108, 203, 706, 810, 1534
BsmAI GTCTC 1 cut(s) 238
BsmBI CGTCTC 1 cut(s) 238
BsmFI GGGAC 2 cut(s) 84, 439
BsnI GGCC 9 cut(s) 146, 170, 243, 554, 803, 845, 1424, 1472, 1481
BsoBI CYCGRG 5 cut(s) 589, 706, 840, 1229, 1621
Bsp119I TTCGAA 1 cut(s) 783
Bsp1286I GDGCHC 3 cut(s) 596, 1057, 1629
Bsp143I GATC 9 cut(s) 33, 427, 507, 756, 816, 888, 972, 1022, 1139
BspANI GGCC 9 cut(s) 146, 170, 243, 554, 803, 845, 1424, 1472, 1481
BspCNI CTCAG 7 cut(s) 251, 777, 801, 1021, 1420, 1431, 1665
BspDI ATCGAT 1 cut(s) 1334
BspFNI CGCG 3 cut(s) 551, 823, 1319
BspHI TCATGA 1 cut(s) 21
BspLI GGNNCC 4 cut(s) 377, 1024, 1111, 1239
BspPI GGATC 5 cut(s) 28, 502, 1017, 1030, 1134
BspT104I TTCGAA 1 cut(s) 783
BspT107I GGYRCC 2 cut(s) 375, 1109
BspTI CTTAAG 1 cut(s) 1013
BsrBI CCGCTC 3 cut(s) 732, 1153, 1212
BsrFI RCCGGY 1 cut(s) 905
BsrI ACTGG 2 cut(s) 224, 377
BssAI RCCGGY 1 cut(s) 905
BssECI CCNNGG 7 cut(s) 107, 511, 558, 706, 860, 1473, 1482
BssMI GATC 9 cut(s) 33, 427, 507, 756, 816, 888, 972, 1022, 1139
BssNI GRCGYC 3 cut(s) 452, 516, 571
BssSI CACGAG 2 cut(s) 302, 617
BssT1I CCWWGG 2 cut(s) 511, 1473
Bst2BI CACGAG 2 cut(s) 302, 617
Bst2UI CCWGG 2 cut(s) 109, 898
Bst4CI ACNGT 1 cut(s) 981
Bst6I CTCTTC 1 cut(s) 670
BstACI GRCGYC 3 cut(s) 452, 516, 571
BstAFI CTTAAG 1 cut(s) 1013
BstBAI YACGTR 1 cut(s) 778
BstBI TTCGAA 1 cut(s) 783
BstC8I GCNNGC 5 cut(s) 258, 262, 847, 1151, 1329
BstDEI CTNAG 7 cut(s) 238, 764, 809, 1029, 1407, 1439, 1652
BstENI CCTNNNNNAGG 1 cut(s) 808
BstF5I GGATG 5 cut(s) 147, 722, 870, 1348, 1557
BstFNI CGCG 3 cut(s) 551, 823, 1319
BstH2I RGCGCY 1 cut(s) 1073
BstHHI GCGC 5 cut(s) 114, 616, 1036, 1072, 1319
BstKTI GATC 9 cut(s) 36, 430, 510, 759, 819, 891, 975, 1025, 1142
BstMAI GTCTC 1 cut(s) 238
BstMBI GATC 9 cut(s) 33, 427, 507, 756, 816, 888, 972, 1022, 1139
BstMCI CGRYCG 2 cut(s) 927, 1528
BstMWI GCNNNNNNNGC 7 cut(s) 102, 111, 449, 1052, 1123, 1159, 1478
BstNI CCWGG 2 cut(s) 109, 898
BstSCI CCNGG 6 cut(s) 107, 705, 706, 896, 1481, 1527
BstSLI GKGCMC 1 cut(s) 1057
BstUI CGCG 3 cut(s) 551, 823, 1319
BstV1I GCAGC 2 cut(s) 661, 941
BstV2I GAAGAC 2 cut(s) 669, 747
BstX2I RGATCY 1 cut(s) 1022
BstXI CCANNNNNNTGG 1 cut(s) 304
BstYI RGATCY 1 cut(s) 1022
Bsu15I ATCGAT 1 cut(s) 1334
Bsu36I CCTNAGG 2 cut(s) 238, 1029
BsuRI GGCC 9 cut(s) 146, 170, 243, 554, 803, 845, 1424, 1472, 1481
BsuTUI ATCGAT 1 cut(s) 1334
BtsCI GGATG 5 cut(s) 147, 722, 870, 1348, 1557
BtsI GCAGTG 1 cut(s) 609
BtsIMutI CAGTG 2 cut(s) 609, 1660
Cac8I GCNNGC 5 cut(s) 258, 262, 847, 1151, 1329
CaiI CAGNNNCTG 1 cut(s) 852
CciI TCATGA 1 cut(s) 21
CfoI GCGC 5 cut(s) 114, 616, 1036, 1072, 1319
Cfr10I RCCGGY 1 cut(s) 905
Cfr13I GGNCC 3 cut(s) 135, 169, 843
Cfr9I CCCGGG 1 cut(s) 706
ClaI ATCGAT 1 cut(s) 1334
CseI GACGC 6 cut(s) 253, 441, 505, 560, 655, 803
Csp6I GTAC 3 cut(s) 901, 977, 1286
CviAII CATG 2 cut(s) 22, 1163
CviQI GTAC 3 cut(s) 901, 977, 1286
DdeI CTNAG 7 cut(s) 238, 764, 809, 1029, 1407, 1439, 1652
DpnI GATC 9 cut(s) 35, 429, 509, 758, 818, 890, 974, 1024, 1141
DpnII GATC 9 cut(s) 33, 427, 507, 756, 816, 888, 972, 1022, 1139
DraIII CACNNNGTG 2 cut(s) 1299, 1431
DrdI GACNNNNNNGTC 1 cut(s) 605
DriI GACNNNNNGTC 1 cut(s) 570
DseDI GACNNNNNNGTC 1 cut(s) 605
EaeI YGGCCR 5 cut(s) 144, 552, 1422, 1470, 1479
Eam1104I CTCTTC 1 cut(s) 670
Eam1105I GACNNNNNGTC 1 cut(s) 570
EarI CTCTTC 1 cut(s) 670
EciI GGCGGA 4 cut(s) 349, 412, 618, 862
Ecl136II GAGCTC 1 cut(s) 594
Eco130I CCWWGG 2 cut(s) 511, 1473
Eco24I GRGCYC 2 cut(s) 596, 1629
Eco47I GGWCC 1 cut(s) 135
Eco53kI GAGCTC 1 cut(s) 594
Eco72I CACGTG 1 cut(s) 778
Eco81I CCTNAGG 2 cut(s) 238, 1029
Eco88I CYCGRG 5 cut(s) 589, 706, 840, 1229, 1621
EcoICRI GAGCTC 1 cut(s) 594
EcoNI CCTNNNNNAGG 1 cut(s) 808
EcoO109I RGGNCCY 1 cut(s) 135
EcoRII CCWGG 2 cut(s) 107, 896
EcoT14I CCWWGG 2 cut(s) 511, 1473
EcoT38I GRGCYC 2 cut(s) 596, 1629
ErhI CCWWGG 2 cut(s) 511, 1473
Esp3I CGTCTC 1 cut(s) 238
FaeI CATG 2 cut(s) 25, 1166
FaiI YATR 6 cut(s) 23, 392, 1164, 1272, 1274, 1446
FaqI GGGAC 2 cut(s) 84, 439
FatI CATG 2 cut(s) 21, 1162
FauI CCCGC 4 cut(s) 737, 1320, 1339, 1661
FauNDI CATATG 1 cut(s) 1272
FbaI TGATCA 1 cut(s) 756
FblI GTMKAC 1 cut(s) 623
Fnu4HI GCNGC 4 cut(s) 379, 552, 650, 930
FokI GGATG 5 cut(s) 134, 709, 877, 1355, 1564
FriOI GRGCYC 2 cut(s) 596, 1629
Fsp4HI GCNGC 4 cut(s) 379, 552, 650, 930
GlaI GCGC 5 cut(s) 113, 615, 1035, 1071, 1318
GluI GCNGC 4 cut(s) 379, 552, 650, 930
GsaI CCCAGC 1 cut(s) 105
HaeII RGCGCY 1 cut(s) 1073
HaeIII GGCC 9 cut(s) 146, 170, 243, 554, 803, 845, 1424, 1472, 1481
HapII CCGG 5 cut(s) 707, 906, 1050, 1482, 1528
HgaI GACGC 6 cut(s) 253, 441, 505, 560, 655, 803
HhaI GCGC 5 cut(s) 114, 616, 1036, 1072, 1319
Hin1I GRCGYC 3 cut(s) 452, 516, 571
Hin1II CATG 2 cut(s) 25, 1166
Hin6I GCGC 5 cut(s) 112, 614, 1034, 1070, 1317
HinP1I GCGC 5 cut(s) 112, 614, 1034, 1070, 1317
HincII GTYRAC 4 cut(s) 520, 624, 1649, 1681
HindII GTYRAC 4 cut(s) 520, 624, 1649, 1681
HindIII AAGCTT 1 cut(s) 122
HpaII CCGG 5 cut(s) 707, 906, 1050, 1482, 1528
HphI GGTGA 4 cut(s) 574, 928, 1178, 1270
Hpy166II GTNNAC 8 cut(s) 307, 520, 624, 903, 919, 1055, 1649, 1681
Hpy188III TCNNGA 7 cut(s) 11, 22, 643, 754, 984, 1375, 1409
Hpy8I GTNNAC 8 cut(s) 307, 520, 624, 903, 919, 1055, 1649, 1681
Hpy99I CGWCG 3 cut(s) 602, 649, 749
HpyAV CCTTC 3 cut(s) 259, 649, 1393
HpyCH4III ACNGT 1 cut(s) 981
HpyCH4IV ACGT 1 cut(s) 777
HpyCH4V TGCA 5 cut(s) 164, 276, 855, 1055, 1302
HpyF10VI GCNNNNNNNGC 7 cut(s) 102, 111, 449, 1052, 1123, 1159, 1478
HpyF3I CTNAG 7 cut(s) 238, 764, 809, 1029, 1407, 1439, 1652
HpySE526I ACGT 1 cut(s) 777
Hsp92I GRCGYC 3 cut(s) 452, 516, 571
Hsp92II CATG 2 cut(s) 25, 1166
HspAI GCGC 5 cut(s) 112, 614, 1034, 1070, 1317
Ksp22I TGATCA 1 cut(s) 756
Kzo9I GATC 9 cut(s) 33, 427, 507, 756, 816, 888, 972, 1022, 1139
LmnI GCTCC 4 cut(s) 181, 599, 737, 1217
Lsp1109I GCAGC 2 cut(s) 661, 941
LweI GCATC 3 cut(s) 855, 1333, 1340
MaeII ACGT 1 cut(s) 777
MaeIII GTNAC 4 cut(s) 82, 562, 607, 1205
MalI GATC 9 cut(s) 35, 429, 509, 758, 818, 890, 974, 1024, 1141
MbiI CCGCTC 3 cut(s) 732, 1153, 1212
MboI GATC 9 cut(s) 33, 427, 507, 756, 816, 888, 972, 1022, 1139
MboII GAAGA 6 cut(s) 657, 669, 752, 826, 1598, 1601
MflI RGATCY 1 cut(s) 1022
MhlI GDGCHC 3 cut(s) 596, 1057, 1629
MlsI TGGCCA 2 cut(s) 1424, 1472
MluCI AATT 7 cut(s) 486, 538, 690, 718, 940, 1217, 1691
MluNI TGGCCA 2 cut(s) 1424, 1472
MlyI GAGTC 8 cut(s) 302, 559, 571, 619, 1150, 1160, 1388, 1654
MmeI TCCRAC 6 cut(s) 366, 599, 621, 930, 1320, 1536
Mox20I TGGCCA 2 cut(s) 1424, 1472
MroXI GAANNNNTTC 1 cut(s) 125
MscI TGGCCA 2 cut(s) 1424, 1472
MseI TTAA 5 cut(s) 969, 1014, 1224, 1461, 1499
MslI CAYNNNNRTG 2 cut(s) 302, 560
Msp20I TGGCCA 2 cut(s) 1424, 1472
MspCI CTTAAG 1 cut(s) 1013
MspI CCGG 5 cut(s) 707, 906, 1050, 1482, 1528
MspR9I CCNGG 6 cut(s) 109, 707, 708, 898, 1483, 1529
MvaI CCWGG 2 cut(s) 109, 898
MvnI CGCG 3 cut(s) 551, 823, 1319
MwoI GCNNNNNNNGC 7 cut(s) 102, 111, 449, 1052, 1123, 1159, 1478
NciI CCSGG 4 cut(s) 707, 708, 1483, 1529
NdeI CATATG 1 cut(s) 1272
NdeII GATC 9 cut(s) 33, 427, 507, 756, 816, 888, 972, 1022, 1139
NlaIII CATG 2 cut(s) 25, 1166
NlaIV GGNNCC 4 cut(s) 377, 1024, 1111, 1239
NmeAIII GCCGAG 4 cut(s) 547, 678, 1138, 1148
NmuCI GTSAC 3 cut(s) 82, 562, 607
NspV TTCGAA 1 cut(s) 783
OliI CACNNNNGTG 2 cut(s) 302, 560
PaeR7I CTCGAG 1 cut(s) 589
PagI TCATGA 1 cut(s) 21
PcsI WCGNNNNNNNCGW 3 cut(s) 555, 650, 929
PdmI GAANNNNTTC 1 cut(s) 125
PfeI GAWTC 2 cut(s) 602, 1243
Pfl23II CGTACG 1 cut(s) 976
PflFI GACNNNGTC 1 cut(s) 224
PkrI GCNGC 4 cut(s) 380, 553, 651, 931
PleI GAGTC 8 cut(s) 302, 559, 571, 619, 1150, 1160, 1388, 1653
PmaCI CACGTG 1 cut(s) 778
PmlI CACGTG 1 cut(s) 778
PpsI GAGTC 8 cut(s) 302, 559, 571, 619, 1150, 1160, 1388, 1653
Ppu21I YACGTR 1 cut(s) 778
PpuMI RGGWCCY 1 cut(s) 135
Psp124BI GAGCTC 1 cut(s) 596
Psp5II RGGWCCY 1 cut(s) 135
Psp6I CCWGG 2 cut(s) 107, 896
PspCI CACGTG 1 cut(s) 778
PspFI CCCAGC 1 cut(s) 101
PspGI CCWGG 2 cut(s) 107, 896
PspLI CGTACG 1 cut(s) 976
PspN4I GGNNCC 4 cut(s) 377, 1024, 1111, 1239
PspPI GGNCC 3 cut(s) 135, 169, 843
PspPPI RGGWCCY 1 cut(s) 135
PspXI VCTCGAGB 1 cut(s) 589
PstNI CAGNNNCTG 1 cut(s) 852
PsuI RGATCY 1 cut(s) 1022
PsyI GACNNNGTC 1 cut(s) 224
RsaI GTAC 3 cut(s) 902, 978, 1287
RsaNI GTAC 3 cut(s) 901, 977, 1286
RseI CAYNNNNRTG 2 cut(s) 302, 560
SacI GAGCTC 1 cut(s) 596
SalI GTCGAC 1 cut(s) 622
SaqAI TTAA 5 cut(s) 969, 1014, 1224, 1461, 1499
SatI GCNGC 4 cut(s) 379, 552, 650, 930
Sau3AI GATC 9 cut(s) 33, 427, 507, 756, 816, 888, 972, 1022, 1139
Sau96I GGNCC 3 cut(s) 135, 169, 843
SchI GAGTC 8 cut(s) 302, 559, 571, 619, 1150, 1160, 1388, 1654
ScrFI CCNGG 6 cut(s) 109, 707, 708, 898, 1483, 1529
SduI GDGCHC 3 cut(s) 596, 1057, 1629
SfaNI GCATC 3 cut(s) 855, 1333, 1340
SfiI GGCCNNNNNGGCC 1 cut(s) 1478
Sfr274I CTCGAG 1 cut(s) 589
SfuI TTCGAA 1 cut(s) 783
SgrAI CRCCGGYG 1 cut(s) 905
SinI GGWCC 1 cut(s) 135
SlaI CTCGAG 1 cut(s) 589
SmaI CCCGGG 1 cut(s) 708
SmiMI CAYNNNNRTG 2 cut(s) 302, 560
SmlI CTYRAG 4 cut(s) 589, 1013, 1306, 1375
SmoI CTYRAG 4 cut(s) 589, 1013, 1306, 1375
Sse9I AATT 7 cut(s) 486, 538, 690, 718, 940, 1217, 1691
SstI GAGCTC 1 cut(s) 596
StyD4I CCNGG 6 cut(s) 107, 705, 706, 896, 1481, 1527
StyI CCWWGG 2 cut(s) 511, 1473
TaaI ACNGT 1 cut(s) 981
TaiI ACGT 1 cut(s) 780
TaqII GACCGA 2 cut(s) 595, 913
TasI AATT 7 cut(s) 486, 538, 690, 718, 940, 1217, 1691
TauI GCSGC 2 cut(s) 381, 554
TfiI GAWTC 2 cut(s) 602, 1243
Tru1I TTAA 5 cut(s) 969, 1014, 1224, 1461, 1499
Tru9I TTAA 5 cut(s) 969, 1014, 1224, 1461, 1499
TscAI CASTG 2 cut(s) 616, 1660
TseFI GTSAC 3 cut(s) 82, 562, 607
TseI GCWGC 2 cut(s) 649, 929
Tsp45I GTSAC 3 cut(s) 82, 562, 607
TspDTI ATGAA 4 cut(s) 38, 178, 711, 1608
TspGWI ACGGA 2 cut(s) 428, 724
TspMI CCCGGG 1 cut(s) 706
TspRI CASTG 2 cut(s) 616, 1660
Tth111I GACNNNGTC 1 cut(s) 224
Vha464I CTTAAG 1 cut(s) 1013
VneI GTGCAC 1 cut(s) 1053
VpaK11BI GGWCC 1 cut(s) 135
XagI CCTNNNNNAGG 1 cut(s) 808
XapI RAATTY 2 cut(s) 538, 1691
XcmI CCANNNNNNNNNTGG 1 cut(s) 1102
XhoI CTCGAG 1 cut(s) 589
XmaI CCCGGG 1 cut(s) 706
XmiI GTMKAC 1 cut(s) 623
XmnI GAANNNNTTC 1 cut(s) 125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.