Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0004196

Physical Location & Seq

Genomic Coordinates Forward (+)

38286683 .. 38292800

Gene Structure 6118 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g51710.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2736 bp

ATGGATTTGGTGAATAGTTACAAGGGGGTTGTAGGTCTGGTTTTCGGCAATGAGAAATCTTCGTCTTCAAATGAAGATAGTCATGTCGAGCGGTTGCTGGACTGTATAAGCAATGGGAAGCTGGCAGAGGACAGGAGGACTGCTATGGTGGAGCTTCAGTCTGTTGTGGCTGAAAGCTCTGGTGCTCAGCTGGCGTTTGGAGCCATGGGATTTCCTGTTATGATGGGTGTATTGAGAGAAGAACGCGACGATGTTGAAATGATCCGAGGTGCCCTAGAAACTCTTGTAGGTGCCTTGACTCCTATTGAACATTCAAAAATCCCAAAGAACGAGATTCAACCAGCTTTGATGAACACGGATTTGCTTTCTAGAGAAGCAGACAGCATTTCACTTCTCTTAAGTTTGTTGTCAGAGGAGGATTTCTATGTACGGTATTACACTCTTCAGCTTTTGACCGCTCTTCTCACGAATTCTCCAAATAGGTTACAGGAAGCCATTCTGACCATACCTCGTGGTATAACTCGCCTAATGGATATGCTTATGGATCGTGAGGTTATACGAAATGAGGCCTTGTTACTACTTACTTACTTGACACGTGAAGCTGAGGAAATTCAAAAAATTGTGGTCTTTGAAGGTGCTTTTGAAAAGATCTTCAGCATCATCAGAGAGGAAGGTGGCTCAGATGGTGGTGTTGTTGTCCAGGACTGTATTGAACTGTTAAACAACCTTATTCGGAAGAATGCATCTAATCAGATACTACTGAGGGAGACAATTGGATTTGATCCATTAATGTCAATTTTGAAGTTACGAGGAAGTACTTACAGTTTCACTCAACAAAAGACAATTAATCTACTCAGTTCGTTGGAAACTATTAATTTGCTAATTATGGGAGGTTCAGAGGCTGATCCTGGAAAAGATGCAAATAAGCTGGCAAACAAGACAACTCTTGTTCAGAAAAAAGTCTTGGACCATCTTTTAATGCTGGGTGTAGAAAGCCAGTGGGCACCTGTTGCTGTCCGTTGTGCGGCATTACAATGCGTTGGTAATCTGATTATTGGACATTCCAAGAATCTTGATGCCATTGCAAGCAAAGTTCTTGGGGAGGGGCCACAGGAACCTGCTCTGAACTCAATTCTACGAATCATCTTAAGGACATCTAGTGTACAAGAATTTGTTGCAGCAGATTATGTTTTTAAGAGCTTTTGTGAGAAAAATGCTGATGGCCAAAAAATGTTAGCGTCAACATTGATTCCTCAACCACATTCAATGACTCATGCACCGCTTGAGGAAGATGTGAACGTGTCATTTGGAAGCATATTGTTACAAGGTCTTACCATGAGCGAGAATGAAGTTGATCTTGAGACATGTTGCAGAGCTGCCAGTGTTCTATCTCATATCATGAAAGACAATGTCCACTGCAAGGAAAAGGTGTTACATATTGAACTTGAAGCACCTACGCCATCTTTAGGCGCTTCTGAACCTCTAATGTATCGCATGGTAACATACTTGGCCCTTTCCTCTTCCATGAAAAACAAAGATGGGAAGTCAAGTGGAAATGCATATATTCAACCAATTCTCTTGAAAATGCTGGTGACTTGGCTAGCTGATTTCCCTAGTGCTGTGCATTGCTTCCTAGATTCACGTCCCCACATCACATATCTGCTCGAGTTGGTATCCAGTTCATCTGCTACAGTGTTCATAAAGGGACTGGCGGCTGTTCTTCTGGGAGAGTGTGTTATCTACAATAAATCTGGTGAAAGTGGGAAAGATGCTTTTACTGTAGTTGATTCCATAAGCCAGAAGGTTGGACTCACATCATACTTTCTGAAGTTTGATGAAATGAGAAAAAGCTTCCTTTTCACCTCTGCAAGGTCTGCTGAGCCCCCTAAACAGTTAACTAGATCTGCTTCTGCTGGTATGGTAGAGCCTGAAGATGTTGAGGAGAACAATTTATCTGATCAGAAAGATGAGGATCTACCGGTTCTGTCCTCAATCTTTGATGCTGCATTTGTAAACCTTGTTAAGAGTTTAGAGGCAAACATCAGAGAAAAAATTGTTGAGGTTTACAGTCAACCAAAGAGCAATGTGGCAGTGGTGCCAGCAGAATTGGAACAAAAGAGTGGGGAAAGCGATGGGGAGTATATTAAGCGGCTGAAGGAATTTGTGGAAAAGCAATGCTTTGAAATACAGGACCTCCTTGGCCGCAATGCAAGCTTGGCTGAGGACGTAGCAGCAACTGGTGGGGCCAGTCATTCTCGGTCTGAACAAGGCACAGGCTCAGATAGAGTTCACGTAGAGGCACTTAGACGAGATCTTCAAGAAGCCTCTAAGCGGTTGGAGTTGCTCAAGGCAGAGAAAGCCAAGATTGAATCTGAGGCATCCATGTATAAAAACTTGGCTGGCAAGATGGAATCCGACCTGAAGAGTCTATCAGATGCTTACAACAGTCTTGAGCAGGCCAATTTCCAACTAGAAAAGGAGGTAAGAGGTGAAAAGGGTGTGGGGTCTTTGGCCTTTCCAGATGTGGATGCAATTAGAGCTCAGGCAAGGGAAGAAGCTCAGAAGGAGAGCGAGGCAGAGCTGAATGATCTTCTCGTATGCCTCGGACAAGAACAGAGCAAGGTTGAAAAGCTTAGTGGTAGGTTGTTGGAGTTGGGGGAGGACGTGGACAAGCTGCTTGAAGATATTGGAGATGATATGGGATTGCCTGCAGATGGTGAAGAGGAGGAAGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005794 GO:0005795 GO:0005798 GO:0005829 GO:0006810 GO:0006886 GO:0006888 GO:0007275 GO:0008104 GO:0008150 GO:0008565 GO:0009791 GO:0009987 GO:0012505 GO:0012506 GO:0012507 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0022406 GO:0030133 GO:0030134 GO:0030135 GO:0030658 GO:0030659 GO:0030660 GO:0030662 GO:0031090 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032527 GO:0033036 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044433 GO:0044444 GO:0044446 GO:0044464 GO:0045056 GO:0045184 GO:0046907 GO:0048193 GO:0048211 GO:0048278 GO:0048856 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051649 GO:0061024 GO:0061025 GO:0070727 GO:0071702 GO:0071705 GO:0071840 GO:0097708 GO:0098588 GO:0098791 GO:0098805 GO:0140056

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Uso1_p115_C Uso1_p115_head

Protein Analysis

912

Amino Acids

100.12

Weight (kDa)

4.82

Isoelectric Point (pI)

43.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Uso1_p115_head	PF04869	373 - 684	1.6e-24	Uso1 / p115 like vesicle tethering protein, head region
Uso1_p115_C	PF04871	785 - 909	4.1e-28	Uso1 / p115 like vesicle tethering protein, C terminal region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0004196)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27530
fragaria_vesca	FvH4_1g06690 FvH4_1g06690 FvH4_6g51710 FvH4_6g51710 FvH4_6g51710 FvH4_6g51710
malus_domestica	MD09G1023300.v1.1 MD17G1022800.v1.1
prunus_persica	Prupe.3G293500_v2.0.a1 Prupe.3G293600_v2.0.a1
pyrus_communis	pycom111g01940
rosa_chinensis	RchiOBHm_Chr2g0173241 RchiOBHm_Chr2g0173251
rosa_laevigata	RLG00000022173 RLG00000022175
rosa_multiflora	Rmu_sc0010961.1_g000008 Rmu_sc0010961.1_g000011
rosa_roxburghii	Rroxscaffold_2G00079090
rosa_rugosa	Rorug02G0566800 Rorug02G0566900 Rorug02G0566900 Rorug02G0566900
rosa_samantha	Rh2AG646700 Rh2BG657400 Rh2CG622600 Rh2CG623100 Rh2CG623200 Rh2DG671000 Rh2DG671500 Rh2DG671600
rosa_wichuraiana	Rw2G053120 Rw2G053130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1126
AccB1I	GGYRCC	4 cut(s)	269, 290, 1003, 2095
AccBSI	CCGCTC	2 cut(s)	91, 458
AccII	CGCG	1 cut(s)	246
AciI	CCGC	8 cut(s)	91, 456, 1025, 1280, 1712, 2149, 2203, 2332
AclWI	GGATC	5 cut(s)	256, 552, 776, 899, 1980
AcoI	YGGCCR	2 cut(s)	1222, 2200
AcsI	RAATTY	4 cut(s)	469, 609, 1169, 2159
AcuI	CTGAAG	7 cut(s)	140, 428, 637, 1847, 1950, 2174, 2441
AcvI	CACGTG	1 cut(s)	596
AfaI	GTAC	3 cut(s)	429, 817, 1164
AfiI	CCNNNNNNNGG	6 cut(s)	1024, 1420, 1466, 1869, 2331, 2714
AflII	CTTAAG	2 cut(s)	397, 1147
AflIII	ACRYGT	3 cut(s)	593, 1299, 1364
AgeI	ACCGGT	1 cut(s)	1978
AjiI	CACGTC	2 cut(s)	1643, 2665
AjnI	CCWGG	2 cut(s)	699, 907
AjuI	GAANNNNNNNTTGG	2 cut(s)	947, 979
Alw21I	GWGCWC	2 cut(s)	187, 2542
Alw26I	GTCTC	2 cut(s)	761, 1355
AlwI	GGATC	5 cut(s)	256, 552, 776, 899, 1980
AlwNI	CAGNNNCTG	2 cut(s)	902, 2237
Ama87I	CYCGRG	1 cut(s)	1664
AoxI	GGCC	8 cut(s)	567, 1106, 1222, 1509, 2200, 2244, 2457, 2511
ApeKI	GCWGC	5 cut(s)	1178, 1376, 2003, 2231, 2674
ApoI	RAATTY	4 cut(s)	469, 609, 1169, 2159
AseI	ATTAAT	3 cut(s)	788, 846, 873
AsiGI	ACCGGT	1 cut(s)	1978
Asp700I	GAANNNNTTC	1 cut(s)	495
AspLEI	GCGC	1 cut(s)	1472
AspS9I	GGNCC	5 cut(s)	967, 1106, 1510, 2191, 2244
AsuHPI	GGTGA	6 cut(s)	22, 1603, 1766, 1852, 2501, 2729
AsuNHI	GCTAGC	1 cut(s)	1600
AvaI	CYCGRG	1 cut(s)	1664
AvaII	GGWCC	2 cut(s)	967, 2191
BaeGI	GKGCMC	2 cut(s)	274, 1006
BalI	TGGCCA	1 cut(s)	1224
BanI	GGYRCC	4 cut(s)	269, 290, 1003, 2095
BanII	GRGCYC	2 cut(s)	1884, 2542
BauI	CACGAG	1 cut(s)	510
BbrPI	CACGTG	1 cut(s)	596
BbsI	GAAGAC	1 cut(s)	57
Bbv12I	GWGCWC	2 cut(s)	187, 2542
BbvCI	CCTCAGC	2 cut(s)	603, 2220
BbvI	GCAGC	5 cut(s)	1190, 1363, 1990, 2243, 2661
BccI	CCATC	9 cut(s)	217, 677, 978, 1214, 1468, 1532, 2126, 2401, 2708
BciT130I	CCWGG	2 cut(s)	701, 909
BciVI	GTATCC	1 cut(s)	1684
BclI	TGATCA	1 cut(s)	1957
BcoDI	GTCTC	2 cut(s)	761, 1355
BfaI	CTAG	8 cut(s)	275, 369, 1158, 1601, 1614, 1634, 1899, 2471
BfmI	CTRYAG	3 cut(s)	1689, 1779, 2709
BfoI	RGCGCY	1 cut(s)	1473
BfrI	CTTAAG	2 cut(s)	397, 1147
BfuAI	ACCTGC	1 cut(s)	1126
BfuI	GTATCC	1 cut(s)	1684
BglII	AGATCT	3 cut(s)	648, 1901, 2311
BisI	GCNGC	9 cut(s)	1026, 1179, 1377, 1713, 2004, 2150, 2203, 2232, 2675
BlpI	GCTNAGC	2 cut(s)	186, 1878
BlsI	GCNGC	9 cut(s)	1027, 1180, 1378, 1714, 2005, 2151, 2204, 2233, 2676
BmcAI	AGTACT	1 cut(s)	817
Bme1390I	CCNGG	2 cut(s)	701, 909
Bme18I	GGWCC	2 cut(s)	967, 2191
BmeT110I	CYCGRG	1 cut(s)	1664
BmgBI	CACGTC	2 cut(s)	1643, 2665
BmgT120I	GGNCC	5 cut(s)	967, 1106, 1510, 2191, 2244
BmiI	GGNNCC	8 cut(s)	202, 271, 292, 1005, 1107, 1116, 2097, 2245
BmrFI	CCNGG	2 cut(s)	701, 909
BmsI	GCATC	9 cut(s)	666, 752, 907, 1066, 1759, 1990, 2387, 2425, 2518
BmtI	GCTAGC	1 cut(s)	1604
BpiI	GAAGAC	1 cut(s)	57
Bpu10I	CCTNAGC	3 cut(s)	603, 2220, 2541
Bpu1102I	GCTNAGC	2 cut(s)	186, 1878
BpuEI	CTTGAG	4 cut(s)	1304, 1379, 2330, 2471
BsaAI	YACGTR	2 cut(s)	596, 2293
BsaBI	GATNNNNATC	1 cut(s)	1971
BsaJI	CCNNGG	4 cut(s)	204, 265, 2197, 2602
BsaWI	WCCGGW	1 cut(s)	1978
BsaXI	ACNNNNNCTCC	9 cut(s)	143, 173, 457, 487, 1719, 1749, 2178, 2208, 2717
Bsc4I	CCNNNNNNNGG	6 cut(s)	1024, 1420, 1466, 1869, 2331, 2714
Bse118I	RCCGGY	1 cut(s)	1978
Bse1I	ACTGG	6 cut(s)	997, 1380, 1677, 1713, 2242, 2247
Bse3DI	GCAATG	7 cut(s)	55, 118, 1080, 1624, 2089, 2180, 2212
Bse8I	GATNNNNATC	1 cut(s)	1971
BseBI	CCWGG	2 cut(s)	701, 909
BseDI	CCNNGG	4 cut(s)	204, 265, 2197, 2602
BseGI	GGATG	2 cut(s)	2378, 2533
BseJI	GATNNNNATC	1 cut(s)	1971
BseLI	CCNNNNNNNGG	6 cut(s)	1024, 1420, 1466, 1869, 2331, 2714
BseMI	GCAATG	7 cut(s)	55, 118, 1080, 1624, 2089, 2180, 2212
BseNI	ACTGG	6 cut(s)	997, 1380, 1677, 1713, 2242, 2247
BseRI	GAGGAG	2 cut(s)	428, 1955
BseSI	GKGCMC	2 cut(s)	274, 1006
BseXI	GCAGC	5 cut(s)	1190, 1363, 1990, 2243, 2661
BseYI	CCCAGC	1 cut(s)	982
Bsh1236I	CGCG	1 cut(s)	246
BshFI	GGCC	8 cut(s)	569, 1108, 1224, 1511, 2202, 2246, 2459, 2513
BshNI	GGYRCC	4 cut(s)	269, 290, 1003, 2095
BshTI	ACCGGT	1 cut(s)	1978
BsiHKAI	GWGCWC	2 cut(s)	187, 2542
BsiHKCI	CYCGRG	1 cut(s)	1664
BsiSI	CCGG	1 cut(s)	1979
BslFI	GGGAC	2 cut(s)	1629, 1719
BslI	CCNNNNNNNGG	6 cut(s)	1024, 1420, 1466, 1869, 2331, 2714
BsmAI	GTCTC	2 cut(s)	761, 1355
BsmFI	GGGAC	2 cut(s)	1629, 1719
BsmI	GAATGC	1 cut(s)	745
BsnI	GGCC	8 cut(s)	569, 1108, 1224, 1511, 2202, 2246, 2459, 2513
BsoBI	CYCGRG	1 cut(s)	1664
Bsp1286I	GDGCHC	5 cut(s)	187, 274, 1006, 1884, 2542
Bsp1407I	TGTACA	1 cut(s)	1162
Bsp1720I	GCTNAGC	2 cut(s)	186, 1878
Bsp19I	CCATGG	1 cut(s)	204
BspACI	CCGC	8 cut(s)	91, 456, 1025, 1280, 1712, 2149, 2203, 2332
BspANI	GGCC	8 cut(s)	569, 1108, 1224, 1511, 2202, 2246, 2459, 2513
BspFNI	CGCG	1 cut(s)	246
BspHI	TCATGA	1 cut(s)	1398
BspLI	GGNNCC	8 cut(s)	202, 271, 292, 1005, 1107, 1116, 2097, 2245
BspMAI	CTGCAG	1 cut(s)	2713
BspMI	ACCTGC	1 cut(s)	1126
BspOI	GCTAGC	1 cut(s)	1604
BspPI	GGATC	5 cut(s)	256, 552, 776, 899, 1980
BspQI	GCTCTTC	1 cut(s)	465
BspT107I	GGYRCC	4 cut(s)	269, 290, 1003, 2095
BspTI	CTTAAG	2 cut(s)	397, 1147
BsrBI	CCGCTC	2 cut(s)	91, 458
BsrDI	GCAATG	7 cut(s)	55, 118, 1080, 1624, 2089, 2180, 2212
BsrFI	RCCGGY	1 cut(s)	1978
BsrGI	TGTACA	1 cut(s)	1162
BsrI	ACTGG	6 cut(s)	997, 1380, 1677, 1713, 2242, 2247
BssAI	RCCGGY	1 cut(s)	1978
BssECI	CCNNGG	4 cut(s)	204, 265, 2197, 2602
BssSI	CACGAG	1 cut(s)	510
BssT1I	CCWWGG	2 cut(s)	204, 2197
Bst2BI	CACGAG	1 cut(s)	510
Bst2UI	CCWGG	2 cut(s)	701, 909
Bst6I	CTCTTC	6 cut(s)	447, 465, 1525, 2417, 2715, 2724
BstAFI	CTTAAG	2 cut(s)	397, 1147
BstAPI	GCANNNNNTGC	2 cut(s)	1010, 1874
BstAUI	TGTACA	1 cut(s)	1162
BstBAI	YACGTR	2 cut(s)	596, 2293
BstDSI	CCRYGG	1 cut(s)	204
BstENI	CCTNNNNNAGG	1 cut(s)	1867
BstF5I	GGATG	2 cut(s)	2378, 2533
BstFNI	CGCG	1 cut(s)	246
BstH2I	RGCGCY	1 cut(s)	1473
BstHHI	GCGC	1 cut(s)	1472
BstMAI	GTCTC	2 cut(s)	761, 1355
BstMWI	GCNNNNNNNGC	8 cut(s)	191, 200, 1010, 1874, 2211, 2216, 2357, 2537
BstNI	CCWGG	2 cut(s)	701, 909
BstNSI	RCATGY	1 cut(s)	1368
BstSCI	CCNGG	2 cut(s)	699, 907
BstSFI	CTRYAG	3 cut(s)	1689, 1779, 2709
BstSLI	GKGCMC	2 cut(s)	274, 1006
BstUI	CGCG	1 cut(s)	246
BstV1I	GCAGC	5 cut(s)	1190, 1363, 1990, 2243, 2661
BstV2I	GAAGAC	1 cut(s)	57
BstX2I	RGATCY	4 cut(s)	648, 1901, 1972, 2311
BstXI	CCANNNNNNTGG	1 cut(s)	1805
BstYI	RGATCY	4 cut(s)	648, 1901, 1972, 2311
BsuI	GTATCC	1 cut(s)	1684
BsuRI	GGCC	8 cut(s)	569, 1108, 1224, 1511, 2202, 2246, 2459, 2513
BtgI	CCRYGG	1 cut(s)	204
BtgZI	GCGATG	1 cut(s)	2145
BtrI	CACGTC	2 cut(s)	1643, 2665
BtsCI	GGATG	2 cut(s)	2378, 2533
BtsI	GCAGTG	2 cut(s)	1414, 2097
BtsIMutI	CAGTG	5 cut(s)	1004, 1387, 1414, 1698, 2097
BveI	ACCTGC	1 cut(s)	1126
CaiI	CAGNNNCTG	2 cut(s)	902, 2237
CciI	TCATGA	1 cut(s)	1398
CfoI	GCGC	1 cut(s)	1472
Cfr10I	RCCGGY	1 cut(s)	1978
Cfr13I	GGNCC	5 cut(s)	967, 1106, 1510, 2191, 2244
CseI	GACGC	1 cut(s)	1227
Csp6I	GTAC	3 cut(s)	428, 816, 1163
CspAI	ACCGGT	1 cut(s)	1978
CviAII	CATG	9 cut(s)	83, 205, 1274, 1336, 1365, 1399, 1495, 1525, 2383
CviQI	GTAC	3 cut(s)	428, 816, 1163
EaeI	YGGCCR	2 cut(s)	1222, 2200
Eam1104I	CTCTTC	6 cut(s)	447, 465, 1525, 2417, 2715, 2724
EarI	CTCTTC	6 cut(s)	447, 465, 1525, 2417, 2715, 2724
Ecl136II	GAGCTC	1 cut(s)	2540
Eco130I	CCWWGG	2 cut(s)	204, 2197
Eco147I	AGGCCT	1 cut(s)	569
Eco24I	GRGCYC	2 cut(s)	1884, 2542
Eco47I	GGWCC	2 cut(s)	967, 2191
Eco53kI	GAGCTC	1 cut(s)	2540
Eco57I	CTGAAG	7 cut(s)	140, 428, 637, 1847, 1950, 2174, 2441
Eco72I	CACGTG	1 cut(s)	596
Eco88I	CYCGRG	1 cut(s)	1664
EcoICRI	GAGCTC	1 cut(s)	2540
EcoNI	CCTNNNNNAGG	1 cut(s)	1867
EcoO109I	RGGNCCY	1 cut(s)	2191
EcoRI	GAATTC	1 cut(s)	469
EcoRII	CCWGG	2 cut(s)	699, 907
EcoT14I	CCWWGG	2 cut(s)	204, 2197
EcoT22I	ATGCAT	2 cut(s)	745, 1561
EcoT38I	GRGCYC	2 cut(s)	1884, 2542
ErhI	CCWWGG	2 cut(s)	204, 2197
FaeI	CATG	9 cut(s)	86, 208, 1277, 1339, 1368, 1402, 1498, 1528, 2386
FalI	AAGNNNNNCTT	4 cut(s)	1341, 1373, 2162, 2194
FaqI	GGGAC	2 cut(s)	1629, 1719
FatI	CATG	9 cut(s)	82, 204, 1273, 1335, 1364, 1398, 1494, 1524, 2382
FbaI	TGATCA	1 cut(s)	1957
Fnu4HI	GCNGC	9 cut(s)	1026, 1179, 1377, 1713, 2004, 2150, 2203, 2232, 2675
FokI	GGATG	2 cut(s)	2365, 2540
FriOI	GRGCYC	2 cut(s)	1884, 2542
Fsp4HI	GCNGC	9 cut(s)	1026, 1179, 1377, 1713, 2004, 2150, 2203, 2232, 2675
FspBI	CTAG	8 cut(s)	275, 369, 1158, 1601, 1614, 1634, 1899, 2471
GlaI	GCGC	1 cut(s)	1471
GluI	GCNGC	9 cut(s)	1026, 1179, 1377, 1713, 2004, 2150, 2203, 2232, 2675
GsaI	CCCAGC	1 cut(s)	986
HaeII	RGCGCY	1 cut(s)	1473
HaeIII	GGCC	8 cut(s)	569, 1108, 1224, 1511, 2202, 2246, 2459, 2513
HapII	CCGG	1 cut(s)	1979
HgaI	GACGC	1 cut(s)	1227
HhaI	GCGC	1 cut(s)	1472
Hin1II	CATG	9 cut(s)	86, 208, 1277, 1339, 1368, 1402, 1498, 1528, 2386
Hin6I	GCGC	1 cut(s)	1470
HinP1I	GCGC	1 cut(s)	1470
HincII	GTYRAC	3 cut(s)	1242, 1896, 2072
HindII	GTYRAC	3 cut(s)	1242, 1896, 2072
HindIII	AAGCTT	3 cut(s)	1849, 2212, 2630
HpaI	GTTAAC	1 cut(s)	1896
HpaII	CCGG	1 cut(s)	1979
HphI	GGTGA	6 cut(s)	22, 1603, 1766, 1852, 2501, 2729
Hpy99I	CGWCG	1 cut(s)	251
HpyAV	CCTTC	5 cut(s)	626, 665, 1795, 2149, 2557
HpyCH4IV	ACGT	6 cut(s)	595, 1299, 1642, 2226, 2292, 2664
HpyF10VI	GCNNNNNNNGC	8 cut(s)	191, 200, 1010, 1874, 2211, 2216, 2357, 2537
HpySE526I	ACGT	6 cut(s)	595, 1299, 1642, 2226, 2292, 2664
Hsp92II	CATG	9 cut(s)	86, 208, 1277, 1339, 1368, 1402, 1498, 1528, 2386
HspAI	GCGC	1 cut(s)	1470
Ksp22I	TGATCA	1 cut(s)	1957
KspAI	GTTAAC	1 cut(s)	1896
LguI	GCTCTTC	1 cut(s)	465
LmnI	GCTCC	2 cut(s)	151, 200
Lsp1109I	GCAGC	5 cut(s)	1190, 1363, 1990, 2243, 2661
LweI	GCATC	9 cut(s)	666, 752, 907, 1066, 1759, 1990, 2387, 2425, 2518
MaeI	CTAG	8 cut(s)	275, 369, 1158, 1601, 1614, 1634, 1899, 2471
MaeII	ACGT	6 cut(s)	595, 1299, 1642, 2226, 2292, 2664
MaeIII	GTNAC	8 cut(s)	17, 483, 573, 804, 1320, 1431, 1498, 1591
MbiI	CCGCTC	2 cut(s)	91, 458
MfeI	CAATTG	1 cut(s)	771
MflI	RGATCY	4 cut(s)	648, 1901, 1972, 2311
MhlI	GDGCHC	5 cut(s)	187, 274, 1006, 1884, 2542
MlsI	TGGCCA	1 cut(s)	1224
MluNI	TGGCCA	1 cut(s)	1224
MlyI	GAGTC	4 cut(s)	292, 1264, 1803, 2434
MmeI	TCCRAC	6 cut(s)	843, 1786, 2316, 2439, 2491, 2628
Mox20I	TGGCCA	1 cut(s)	1224
Mph1103I	ATGCAT	2 cut(s)	745, 1561
MroXI	GAANNNNTTC	1 cut(s)	495
MscI	TGGCCA	1 cut(s)	1224
MslI	CAYNNNNRTG	1 cut(s)	1033
Msp20I	TGGCCA	1 cut(s)	1224
MspA1I	CMGCKG	1 cut(s)	190
MspCI	CTTAAG	2 cut(s)	397, 1147
MspI	CCGG	1 cut(s)	1979
MspR9I	CCNGG	2 cut(s)	701, 909
MunI	CAATTG	1 cut(s)	771
Mva1269I	GAATGC	1 cut(s)	745
MvaI	CCWGG	2 cut(s)	701, 909
MvnI	CGCG	1 cut(s)	246
MwoI	GCNNNNNNNGC	8 cut(s)	191, 200, 1010, 1874, 2211, 2216, 2357, 2537
NcoI	CCATGG	1 cut(s)	204
NheI	GCTAGC	1 cut(s)	1600
NlaIII	CATG	9 cut(s)	86, 208, 1277, 1339, 1368, 1402, 1498, 1528, 2386
NlaIV	GGNNCC	8 cut(s)	202, 271, 292, 1005, 1107, 1116, 2097, 2245
NmuCI	GTSAC	1 cut(s)	1591
NsiI	ATGCAT	2 cut(s)	745, 1561
NspI	RCATGY	1 cut(s)	1368
PaeR7I	CTCGAG	1 cut(s)	1664
PagI	TCATGA	1 cut(s)	1398
PceI	AGGCCT	1 cut(s)	569
PciI	ACATGT	1 cut(s)	1364
PciSI	GCTCTTC	1 cut(s)	465
PctI	GAATGC	1 cut(s)	745
PdmI	GAANNNNTTC	1 cut(s)	495
PfeI	GAWTC	8 cut(s)	334, 1069, 1140, 1249, 1637, 1787, 2369, 2411
PflFI	GACNNNGTC	1 cut(s)	1409
PfoI	TCCNGGA	2 cut(s)	699, 907
PinAI	ACCGGT	1 cut(s)	1978
PkrI	GCNGC	9 cut(s)	1027, 1180, 1378, 1714, 2005, 2151, 2204, 2233, 2676
PleI	GAGTC	4 cut(s)	292, 1264, 1803, 2433
PmaCI	CACGTG	1 cut(s)	596
PmlI	CACGTG	1 cut(s)	596
PpsI	GAGTC	4 cut(s)	292, 1264, 1803, 2433
Ppu21I	YACGTR	2 cut(s)	596, 2293
PpuMI	RGGWCCY	1 cut(s)	2191
PscI	ACATGT	1 cut(s)	1364
PshBI	ATTAAT	3 cut(s)	788, 846, 873
Psp124BI	GAGCTC	1 cut(s)	2542
Psp5II	RGGWCCY	1 cut(s)	2191
Psp6I	CCWGG	2 cut(s)	699, 907
PspCI	CACGTG	1 cut(s)	596
PspFI	CCCAGC	1 cut(s)	982
PspGI	CCWGG	2 cut(s)	699, 907
PspN4I	GGNNCC	8 cut(s)	202, 271, 292, 1005, 1107, 1116, 2097, 2245
PspPI	GGNCC	5 cut(s)	967, 1106, 1510, 2191, 2244
PspPPI	RGGWCCY	1 cut(s)	2191
PspXI	VCTCGAGB	1 cut(s)	1664
PstI	CTGCAG	1 cut(s)	2713
PstNI	CAGNNNCTG	2 cut(s)	902, 2237
PsuI	RGATCY	4 cut(s)	648, 1901, 1972, 2311
PsyI	GACNNNGTC	1 cut(s)	1409
PvuII	CAGCTG	1 cut(s)	190
RsaI	GTAC	3 cut(s)	429, 817, 1164
RsaNI	GTAC	3 cut(s)	428, 816, 1163
RseI	CAYNNNNRTG	1 cut(s)	1033
SacI	GAGCTC	1 cut(s)	2542
SapI	GCTCTTC	1 cut(s)	465
SatI	GCNGC	9 cut(s)	1026, 1179, 1377, 1713, 2004, 2150, 2203, 2232, 2675
Sau96I	GGNCC	5 cut(s)	967, 1106, 1510, 2191, 2244
ScaI	AGTACT	1 cut(s)	817
SchI	GAGTC	4 cut(s)	292, 1264, 1803, 2434
ScrFI	CCNGG	2 cut(s)	701, 909
SduI	GDGCHC	5 cut(s)	187, 274, 1006, 1884, 2542
SfaNI	GCATC	9 cut(s)	666, 752, 907, 1066, 1759, 1990, 2387, 2425, 2518
SfcI	CTRYAG	3 cut(s)	1689, 1779, 2709
Sfr274I	CTCGAG	1 cut(s)	1664
SinI	GGWCC	2 cut(s)	967, 2191
SlaI	CTCGAG	1 cut(s)	1664
SmiMI	CAYNNNNRTG	1 cut(s)	1033
SmlI	CTYRAG	7 cut(s)	397, 1147, 1283, 1358, 1664, 2345, 2450
SmoI	CTYRAG	7 cut(s)	397, 1147, 1283, 1358, 1664, 2345, 2450
SseBI	AGGCCT	1 cut(s)	569
SsiI	CCGC	8 cut(s)	91, 456, 1025, 1280, 1712, 2149, 2203, 2332
SspMI	CTAG	8 cut(s)	275, 369, 1158, 1601, 1614, 1634, 1899, 2471
SstI	GAGCTC	1 cut(s)	2542
StuI	AGGCCT	1 cut(s)	569
StyD4I	CCNGG	2 cut(s)	699, 907
StyI	CCWWGG	2 cut(s)	204, 2197
TaiI	ACGT	6 cut(s)	598, 1302, 1645, 2229, 2295, 2667
TaqI	TCGA	2 cut(s)	87, 1665
TaqII	GACCGA	1 cut(s)	2247
TatI	WGTACW	2 cut(s)	815, 1162
TauI	GCSGC	4 cut(s)	1028, 1715, 2152, 2205
TfiI	GAWTC	8 cut(s)	334, 1069, 1140, 1249, 1637, 1787, 2369, 2411
TscAI	CASTG	5 cut(s)	1004, 1387, 1421, 1698, 2097
TseFI	GTSAC	1 cut(s)	1591
TseI	GCWGC	5 cut(s)	1178, 1376, 2003, 2231, 2674
Tsp45I	GTSAC	1 cut(s)	1591
TspDTI	ATGAA	8 cut(s)	87, 365, 1362, 1415, 1541, 1671, 1687, 1851
TspGWI	ACGGA	2 cut(s)	371, 1007
TspRI	CASTG	5 cut(s)	1004, 1387, 1421, 1698, 2097
Tth111I	GACNNNGTC	1 cut(s)	1409
Vha464I	CTTAAG	2 cut(s)	397, 1147
VpaK11BI	GGWCC	2 cut(s)	967, 2191
VspI	ATTAAT	3 cut(s)	788, 846, 873
XagI	CCTNNNNNAGG	1 cut(s)	1867
XapI	RAATTY	4 cut(s)	469, 609, 1169, 2159
XbaI	TCTAGA	1 cut(s)	368
XceI	RCATGY	1 cut(s)	1368
XhoI	CTCGAG	1 cut(s)	1664
XmnI	GAANNNNTTC	1 cut(s)	495
XspI	CTAG	8 cut(s)	275, 369, 1158, 1601, 1614, 1634, 1899, 2471
ZrmI	AGTACT	1 cut(s)	817
Zsp2I	ATGCAT	2 cut(s)	745, 1561

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.